Abstract
In the title compound, C17H12BrNOS, the cyclohexene ring deviates only slightly from planarity (r.m.s. deviation for non-H atoms = 0.047 Å). In the crystal, the molecules are linked into centrosymmetric R 2 2(10) dimers via pairs of N—H⋯O hydrogen bonds. The thiophene ring is disordered over two positions rotated by 180° and with a site-occupation factor of 0.843 (4) for the major occupied site.
Related literature
For the biological activity of carbazole derivatives, see: Magnus et al. (1992 ▶); Abraham (1975 ▶); Saxton (1983 ▶); Phillipson & Zenk (1980 ▶); Bergman & Pelcman (1990 ▶); Bonesi et al. (2004 ▶); Chakraborty et al. (1965 ▶); Kirtikar & Basu (1933 ▶); Chakraborty et al. (1973 ▶); Savini et al. (2004 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶). For asymmetry parameters, see: Nardelli (1983 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).
Experimental
Crystal data
C17H12BrNOS
M r = 358.25
Monoclinic,
a = 13.8655 (5) Å
b = 6.3081 (3) Å
c = 17.4583 (7) Å
β = 103.666 (2)°
V = 1483.76 (11) Å3
Z = 4
Mo Kα radiation
μ = 2.91 mm−1
T = 296 K
0.21 × 0.17 × 0.16 mm
Data collection
Bruker SMART APEX CCD detector diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 1998 ▶) T min = 0.558, T max = 0.628
12158 measured reflections
4487 independent reflections
1953 reflections with I > 2σ(I)
R int = 0.044
Refinement
R[F 2 > 2σ(F 2)] = 0.047
wR(F 2) = 0.148
S = 0.85
4487 reflections
191 parameters
H-atom parameters constrained
Δρmax = 0.49 e Å−3
Δρmin = −0.31 e Å−3
Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT-Plus (Bruker, 1998 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶).
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811046551/bt5684sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811046551/bt5684Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811046551/bt5684Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N1—H1⋯O1i | 0.88 | 2.00 | 2.804 (4) | 151 |
Symmetry code: (i)
.
Acknowledgments
The authors thank the Solid State Unit, Indian Institute of Science, Bangalore, India, for the data collection and and Dr A. Chandramohan, Post Graduate and Research Department of Chemistry, Sri Ramakrishna Mission Vidyalaya College of Arts and Science, Coimbatore, for his valuable suggestions.
supplementary crystallographic information
Comment
Carbazole alkaloids obtained from naturally occurring sources have been the subject of extensive research, mainly because of their widespread applications in traditional medicine (Bergman & Pelcman, 1990; Bonesi et al., 2004; Chakraborty et al., 1965; Kirtikar & Basu, 1933). Tetrahydrocarbazole systems are present in the framework of a number of indole-type alkaloids of biological interest (Magnus et al., 1992; Abraham, 1975; Saxton, 1983; Phillipson et al., 1980). These types of compounds possess significant antibiotic, anti-carcinogenic, antiviral and anti-inflammatory properties (Chakraborty et al., 1973). The thiophene derivatives possess the antimicrobial activity (Savini et al., 2004). Against this background and to ascertain the molecular structure and conformation, the X-ray crystal structure determination of the title compound has been carried out.
The ORTEP plot of the molecule is shown in Fig. 1. The cyclohexene ring in the carbazole ring system adopts envelope conformation with the puckering parameters (Cremer & Pople, 1975) and the asymmetry parameters (Nardelli, 1983) are: q2=0.126 (5) Å, q3 = 0.050 (4) Å, φ2 = 102.0 (2)° and Δs(C10 & C13)= 4.4 (5)°. Thiophene ring in the molecule is planar conformation. The sum of the bond angles around N1 [359.3°] is in accordance with sp2 hybridization.
The molecules at (x, y, z) and (-x + 2, -y + 1, -z) are linked by N1—H1···O1 hydrogen bonds into a cyclic centrosymmetric R22(14) dimer.
Experimental
The mixed aldol condensation reaction of 6-bromo-1-oxo-1,2,3, 4-tetrahydrocarbazole reacted with thiophene-2-carbaldehyde in the presence of alcoholic KOH, afforded a single product, substituted 6-bromo-2- thiofuran-2-ylmethylene-2,3,4,9-tetrahydro-carbazol-1-one. This was purified by using column chromatography over silica gel (mesh 60–80). During elution of the column with petroleum ether (60–80°C) and ethyl acetate [1:2] mixture, a yellowish solid was obtained. The crystals of the title compound suitable for single XRD analysis were obtained by the slow evaporation method using the solvent mixture ethyl acetate and acetone (8:2) at room temperature.
Refinement
N-bound H atom was located in a difference map and refined isotropically. C-bound H atoms were positioned geometrically (C–H = 0.93–0.97 Å) and allowed to ride on their parent atoms, with Uiso(H) = 1.5Ueq(C) for methyl H atoms and 1.2Ueq(C) for all other H atoms. The thiophene ring is disordered over two positions rotated by 180 degrees and with a site occupation factor of 0.843 (4) for the major occupied site.
Figures
Fig. 1.
The molecular structure of the title compound, showing the atomic numbering and displacement ellipsoids drawn at the 50% probability level.
Fig. 2.
The crystal packing of the title compound. H atoms not involved in hydrogen bonding (dashed lines) have been omitted for clarity.
Crystal data
| C17H12BrNOS | F(000) = 720 |
| Mr = 358.25 | Dx = 1.604 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 1432 reflections |
| a = 13.8655 (5) Å | θ = 2.4–30.5° |
| b = 6.3081 (3) Å | µ = 2.91 mm−1 |
| c = 17.4583 (7) Å | T = 296 K |
| β = 103.666 (2)° | Block, yellow |
| V = 1483.76 (11) Å3 | 0.21 × 0.17 × 0.16 mm |
| Z = 4 |
Data collection
| Bruker SMART APEX CCD detector diffractometer | 4487 independent reflections |
| Radiation source: fine-focus sealed tube | 1953 reflections with I > 2σ(I) |
| graphite | Rint = 0.044 |
| ω scans | θmax = 30.5°, θmin = 2.4° |
| Absorption correction: multi-scan (SADABS; Bruker, 1998) | h = −19→19 |
| Tmin = 0.558, Tmax = 0.628 | k = −4→8 |
| 12158 measured reflections | l = −24→24 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.148 | H-atom parameters constrained |
| S = 0.85 | w = 1/[σ2(Fo2) + (0.0752P)2 + 0.4371P] where P = (Fo2 + 2Fc2)/3 |
| 4487 reflections | (Δ/σ)max = 0.002 |
| 191 parameters | Δρmax = 0.49 e Å−3 |
| 0 restraints | Δρmin = −0.31 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | Occ. (<1) | |
| Br1 | 1.44365 (3) | −0.32770 (7) | 0.06412 (3) | 0.0742 (2) | |
| S1 | 0.76193 (8) | −0.1866 (2) | 0.24215 (7) | 0.0665 (5) | 0.843 (4) |
| C18' | 0.76193 (8) | −0.1866 (2) | 0.24215 (7) | 0.0665 (5) | 0.157 (4) |
| H18' | 0.8144 | −0.2822 | 0.2546 | 0.080* | 0.157 (4) |
| O1 | 0.91041 (18) | 0.3896 (4) | 0.06209 (14) | 0.0557 (6) | |
| N1 | 1.1050 (2) | 0.2754 (5) | 0.04571 (15) | 0.0474 (7) | |
| H1 | 1.0940 | 0.4036 | 0.0258 | 0.057* | |
| C2 | 1.1893 (2) | 0.1612 (5) | 0.04737 (18) | 0.0419 (8) | |
| C3 | 1.2698 (3) | 0.2105 (6) | 0.0147 (2) | 0.0546 (10) | |
| H3 | 1.2722 | 0.3377 | −0.0117 | 0.066* | |
| C4 | 1.3444 (3) | 0.0657 (7) | 0.0229 (2) | 0.0569 (10) | |
| H4 | 1.3992 | 0.0949 | 0.0026 | 0.068* | |
| C5 | 1.3393 (2) | −0.1272 (6) | 0.0619 (2) | 0.0523 (9) | |
| C6 | 1.2619 (2) | −0.1797 (6) | 0.09508 (19) | 0.0458 (8) | |
| H6 | 1.2604 | −0.3082 | 0.1209 | 0.055* | |
| C7 | 1.1855 (2) | −0.0306 (5) | 0.08814 (16) | 0.0401 (7) | |
| C8 | 1.0929 (2) | −0.0273 (5) | 0.11198 (16) | 0.0380 (7) | |
| C9 | 1.0491 (3) | −0.1861 (6) | 0.1562 (2) | 0.0556 (10) | |
| H9A | 1.0982 | −0.2242 | 0.2037 | 0.067* | |
| H9B | 1.0334 | −0.3129 | 0.1243 | 0.067* | |
| C10 | 0.9568 (3) | −0.1110 (6) | 0.1789 (2) | 0.0598 (10) | |
| H10A | 0.9104 | −0.2286 | 0.1706 | 0.072* | |
| H10B | 0.9746 | −0.0836 | 0.2352 | 0.072* | |
| C11 | 0.9014 (2) | 0.0798 (5) | 0.14016 (17) | 0.0405 (7) | |
| C12 | 0.9501 (2) | 0.2235 (6) | 0.09254 (18) | 0.0413 (8) | |
| C13 | 1.0475 (2) | 0.1591 (5) | 0.08458 (17) | 0.0412 (8) | |
| C14 | 0.8096 (2) | 0.1348 (6) | 0.14535 (19) | 0.0472 (8) | |
| H14 | 0.7854 | 0.2568 | 0.1174 | 0.057* | |
| C15 | 0.7412 (2) | 0.0388 (6) | 0.18652 (17) | 0.0480 (9) | |
| C16 | 0.6513 (3) | −0.1697 (8) | 0.2658 (2) | 0.0711 (13) | |
| H16 | 0.6297 | −0.2663 | 0.2984 | 0.085* | |
| C17 | 0.5980 (3) | −0.0032 (9) | 0.2330 (3) | 0.0820 (14) | |
| H17 | 0.5350 | 0.0233 | 0.2406 | 0.098* | |
| S1' | 0.6432 (3) | 0.1340 (6) | 0.1851 (2) | 0.0920 (14) | 0.157 (4) |
| C18 | 0.6432 (3) | 0.1340 (6) | 0.1851 (2) | 0.0920 (14) | 0.843 (4) |
| H18 | 0.6164 | 0.2565 | 0.1589 | 0.110* | 0.843 (4) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Br1 | 0.0607 (3) | 0.0682 (3) | 0.1064 (4) | −0.0012 (2) | 0.0451 (2) | −0.0058 (2) |
| S1 | 0.0530 (7) | 0.0737 (10) | 0.0782 (8) | −0.0023 (6) | 0.0263 (6) | 0.0248 (7) |
| C18' | 0.0530 (7) | 0.0737 (10) | 0.0782 (8) | −0.0023 (6) | 0.0263 (6) | 0.0248 (7) |
| O1 | 0.0592 (14) | 0.0422 (14) | 0.0678 (15) | 0.0038 (13) | 0.0193 (12) | 0.0176 (13) |
| N1 | 0.0558 (17) | 0.0388 (16) | 0.0505 (16) | −0.0049 (14) | 0.0180 (13) | 0.0134 (14) |
| C2 | 0.0544 (18) | 0.0353 (18) | 0.0381 (16) | −0.0101 (17) | 0.0152 (14) | 0.0008 (15) |
| C3 | 0.064 (2) | 0.053 (2) | 0.0515 (19) | −0.019 (2) | 0.0240 (17) | 0.0035 (18) |
| C4 | 0.058 (2) | 0.064 (3) | 0.057 (2) | −0.017 (2) | 0.0289 (17) | −0.003 (2) |
| C5 | 0.0466 (18) | 0.057 (2) | 0.057 (2) | −0.0071 (18) | 0.0210 (16) | −0.0063 (19) |
| C6 | 0.0471 (18) | 0.044 (2) | 0.0508 (18) | −0.0068 (17) | 0.0199 (15) | 0.0014 (17) |
| C7 | 0.0489 (17) | 0.0386 (19) | 0.0349 (15) | −0.0072 (16) | 0.0141 (14) | −0.0016 (15) |
| C8 | 0.0455 (16) | 0.0348 (18) | 0.0352 (15) | −0.0046 (15) | 0.0127 (13) | 0.0018 (15) |
| C9 | 0.054 (2) | 0.049 (2) | 0.071 (2) | 0.0043 (18) | 0.0288 (18) | 0.0206 (19) |
| C10 | 0.066 (2) | 0.054 (2) | 0.071 (2) | 0.009 (2) | 0.0374 (19) | 0.023 (2) |
| C11 | 0.0510 (18) | 0.0354 (18) | 0.0364 (15) | −0.0037 (16) | 0.0129 (14) | −0.0020 (15) |
| C12 | 0.0490 (18) | 0.0353 (19) | 0.0395 (16) | −0.0046 (16) | 0.0099 (14) | −0.0004 (16) |
| C13 | 0.0471 (17) | 0.0367 (19) | 0.0408 (16) | −0.0073 (16) | 0.0122 (14) | 0.0006 (16) |
| C14 | 0.0522 (19) | 0.044 (2) | 0.0455 (18) | −0.0011 (17) | 0.0112 (15) | 0.0072 (16) |
| C15 | 0.0454 (17) | 0.059 (2) | 0.0402 (16) | −0.0049 (18) | 0.0108 (14) | 0.0017 (17) |
| C16 | 0.052 (2) | 0.093 (4) | 0.073 (3) | −0.014 (2) | 0.022 (2) | 0.016 (3) |
| C17 | 0.056 (2) | 0.117 (4) | 0.079 (3) | 0.004 (3) | 0.027 (2) | 0.005 (3) |
| S1' | 0.084 (2) | 0.106 (3) | 0.093 (2) | −0.006 (2) | 0.0363 (18) | 0.011 (2) |
| C18 | 0.084 (2) | 0.106 (3) | 0.093 (2) | −0.006 (2) | 0.0363 (18) | 0.011 (2) |
Geometric parameters (Å, °)
| Br1—C5 | 1.915 (4) | C8—C9 | 1.480 (4) |
| S1—C16 | 1.683 (4) | C9—C10 | 1.503 (4) |
| S1—C15 | 1.707 (4) | C9—H9A | 0.9700 |
| O1—C12 | 1.243 (4) | C9—H9B | 0.9700 |
| N1—C2 | 1.368 (4) | C10—C11 | 1.500 (5) |
| N1—C13 | 1.375 (4) | C10—H10A | 0.9700 |
| N1—H1 | 0.8789 | C10—H10B | 0.9700 |
| C2—C3 | 1.403 (4) | C11—C14 | 1.343 (4) |
| C2—C7 | 1.411 (4) | C11—C12 | 1.495 (4) |
| C3—C4 | 1.361 (5) | C12—C13 | 1.448 (4) |
| C3—H3 | 0.9300 | C14—C15 | 1.451 (4) |
| C4—C5 | 1.403 (5) | C14—H14 | 0.9300 |
| C4—H4 | 0.9300 | C15—S1' | 1.480 (4) |
| C5—C6 | 1.376 (4) | C16—C17 | 1.333 (6) |
| C6—C7 | 1.400 (4) | C16—H16 | 0.9300 |
| C6—H6 | 0.9300 | C17—S1' | 1.445 (6) |
| C7—C8 | 1.441 (4) | C17—H17 | 0.9300 |
| C8—C13 | 1.366 (4) | ||
| C16—S1—C15 | 92.6 (2) | H9A—C9—H9B | 107.7 |
| C2—N1—C13 | 107.5 (3) | C11—C10—C9 | 120.7 (3) |
| C2—N1—H1 | 124.1 | C11—C10—H10A | 107.1 |
| C13—N1—H1 | 128.2 | C9—C10—H10A | 107.1 |
| N1—C2—C3 | 129.2 (3) | C11—C10—H10B | 107.1 |
| N1—C2—C7 | 109.2 (3) | C9—C10—H10B | 107.1 |
| C3—C2—C7 | 121.5 (3) | H10A—C10—H10B | 106.8 |
| C4—C3—C2 | 117.7 (3) | C14—C11—C12 | 116.2 (3) |
| C4—C3—H3 | 121.1 | C14—C11—C10 | 124.7 (3) |
| C2—C3—H3 | 121.1 | C12—C11—C10 | 119.1 (3) |
| C3—C4—C5 | 120.6 (3) | O1—C12—C13 | 121.6 (3) |
| C3—C4—H4 | 119.7 | O1—C12—C11 | 122.5 (3) |
| C5—C4—H4 | 119.7 | C13—C12—C11 | 115.9 (3) |
| C6—C5—C4 | 123.1 (3) | C8—C13—N1 | 111.1 (3) |
| C6—C5—Br1 | 119.5 (3) | C8—C13—C12 | 124.8 (3) |
| C4—C5—Br1 | 117.3 (2) | N1—C13—C12 | 124.1 (3) |
| C5—C6—C7 | 116.8 (3) | C11—C14—C15 | 131.8 (3) |
| C5—C6—H6 | 121.6 | C11—C14—H14 | 114.1 |
| C7—C6—H6 | 121.6 | C15—C14—H14 | 114.1 |
| C6—C7—C2 | 120.1 (3) | C14—C15—S1' | 121.8 (3) |
| C6—C7—C8 | 133.8 (3) | C14—C15—S1 | 126.0 (3) |
| C2—C7—C8 | 106.0 (3) | S1'—C15—S1 | 112.2 (2) |
| C13—C8—C7 | 106.3 (3) | C17—C16—S1 | 112.9 (3) |
| C13—C8—C9 | 123.6 (3) | C17—C16—H16 | 123.6 |
| C7—C8—C9 | 130.1 (3) | S1—C16—H16 | 123.6 |
| C8—C9—C10 | 113.8 (3) | C16—C17—S1' | 116.6 (4) |
| C8—C9—H9A | 108.8 | C16—C17—H17 | 121.7 |
| C10—C9—H9A | 108.8 | S1'—C17—H17 | 121.7 |
| C8—C9—H9B | 108.8 | C17—S1'—C15 | 105.6 (3) |
| C10—C9—H9B | 108.8 | ||
| C13—N1—C2—C3 | 178.8 (3) | C10—C11—C12—O1 | −176.4 (3) |
| C13—N1—C2—C7 | −0.2 (3) | C14—C11—C12—C13 | −177.7 (3) |
| N1—C2—C3—C4 | −178.3 (3) | C10—C11—C12—C13 | 2.9 (4) |
| C7—C2—C3—C4 | 0.6 (5) | C7—C8—C13—N1 | −0.6 (3) |
| C2—C3—C4—C5 | 1.0 (5) | C9—C8—C13—N1 | −180.0 (3) |
| C3—C4—C5—C6 | −1.5 (6) | C7—C8—C13—C12 | 177.2 (3) |
| C3—C4—C5—Br1 | 175.9 (3) | C9—C8—C13—C12 | −2.2 (5) |
| C4—C5—C6—C7 | 0.4 (5) | C2—N1—C13—C8 | 0.5 (4) |
| Br1—C5—C6—C7 | −176.9 (2) | C2—N1—C13—C12 | −177.4 (3) |
| C5—C6—C7—C2 | 1.1 (5) | O1—C12—C13—C8 | −175.6 (3) |
| C5—C6—C7—C8 | 177.9 (3) | C11—C12—C13—C8 | 5.2 (4) |
| N1—C2—C7—C6 | 177.4 (3) | O1—C12—C13—N1 | 2.0 (5) |
| C3—C2—C7—C6 | −1.6 (5) | C11—C12—C13—N1 | −177.3 (3) |
| N1—C2—C7—C8 | −0.2 (3) | C12—C11—C14—C15 | −178.8 (3) |
| C3—C2—C7—C8 | −179.3 (3) | C10—C11—C14—C15 | 0.6 (6) |
| C6—C7—C8—C13 | −176.7 (3) | C11—C14—C15—S1' | 178.2 (4) |
| C2—C7—C8—C13 | 0.5 (3) | C11—C14—C15—S1 | −0.6 (6) |
| C6—C7—C8—C9 | 2.7 (6) | C16—S1—C15—C14 | 178.6 (3) |
| C2—C7—C8—C9 | 179.8 (3) | C16—S1—C15—S1' | −0.4 (3) |
| C13—C8—C9—C10 | −8.5 (5) | C15—S1—C16—C17 | 0.8 (4) |
| C7—C8—C9—C10 | 172.2 (3) | S1—C16—C17—S1' | −1.1 (6) |
| C8—C9—C10—C11 | 16.1 (5) | C16—C17—S1'—C15 | 0.8 (5) |
| C9—C10—C11—C14 | 166.8 (4) | C14—C15—S1'—C17 | −179.2 (3) |
| C9—C10—C11—C12 | −13.8 (5) | S1—C15—S1'—C17 | −0.2 (4) |
| C14—C11—C12—O1 | 3.0 (5) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C14—H14···O1 | 0.93 | 2.33 | 2.759 (4) | 108. |
| N1—H1···O1i | 0.88 | 2.00 | 2.804 (4) | 151. |
Symmetry codes: (i) −x+2, −y+1, −z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BT5684).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811046551/bt5684sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811046551/bt5684Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811046551/bt5684Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


