Abstract
In the title compound, C15H13NO3S, the benzene ring and the five-membered heterocyclic ring are oriented at a dihedral angle of 12.00 (6)°. In the crystal, C—H⋯O interactions generate two types of cyclic motifs, R 2 2(14) and R 2 2(26), connecting the molecules into tapes extending along [101]. In addition, there are π–π stacking interactions between the benzene and thiophene rings with centroid-centroid distances of 3.7263 (14) and 3.7487 (14) Å.
Related literature
For the synthesis of similar compounds, see: Asiri & Khan (2010 ▶, 2011 ▶); Kalirajan et al. (2009 ▶); Patil et al. (2009 ▶); Sarojini et al. (2006 ▶). For related structures and background references, see: Asiri et al. (2010a
▶,b
▶). For graph-set notation, see: Bernstein et al. (1995 ▶).
Experimental
Crystal data
C15H13NO3S
M r = 287.32
Monoclinic,
a = 7.3802 (5) Å
b = 13.7973 (9) Å
c = 13.4638 (8) Å
β = 96.997 (3)°
V = 1360.77 (15) Å3
Z = 4
Mo Kα radiation
μ = 0.24 mm−1
T = 296 K
0.25 × 0.22 × 0.20 mm
Data collection
Bruker KAPPA APEXII CCD diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.945, T max = 0.955
10732 measured reflections
2466 independent reflections
1493 reflections with I > 2σ(I)
R int = 0.051
Refinement
R[F 2 > 2σ(F 2)] = 0.047
wR(F 2) = 0.117
S = 1.03
2466 reflections
183 parameters
H-atom parameters constrained
Δρmax = 0.17 e Å−3
Δρmin = −0.25 e Å−3
Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON.
Supplementary Material
Crystal structure: contains datablock(s) text, I. DOI: 10.1107/S1600536811047933/gk2432sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811047933/gk2432Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811047933/gk2432Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C6—H6⋯O3i | 0.93 | 2.46 | 3.373 (3) | 168 |
| C15—H15B⋯O2ii | 0.96 | 2.59 | 3.339 (4) | 135 |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
The authors would like to thank the Chemistry Department, King Abdulaziz University, Jeddah, Saudi Arabia, for providing research facilities.
supplementary crystallographic information
Comment
Claisen–Schmidt reaction is one of the most important reactions for the formation of α, β-unsaturated ketone by condensation between acetophenone and benzaldehyde (Asiri & Khan, 2010). The reaction is catalysed by bases, acids (Patil et al., 2009). It is widely used in the synthesis of important intermediates (Asiri & Khan, 2011) or end-products, pharmaceuticals (Kalirajan et al., 2009). It is also used in the field of matrial sciences such as photoelectronics, photophotonics, photodynamic therapy, electrochemical sensing, optical limiting, langmuir film and photoinitiated polymerization (Sarojini et al., 2006). The title compound (I), (Fig. 1) has been synthesized as a pharmaceutical intermediate. Similar structures to (I) have been published earlier (Asiri et al., 2010a,b and refereces therein).
In (I), the group A (C1—C6), the central propenone B (C7—C9/O3) and the group C (C10—C15/S1) are planar with r. m. s. deviation of 0.003, 0.012 and 0.008 Å, respectively. The dihedral angles between A/B, A/C and B/C are 9.88 (14), 12.00 (6) and 16.09 (12)°, respectively. The nitro group D (O1/N1/O2) is oriented at a dihedral angle of 8.4 (3)° with relation to the benzene ring A. The title compound consists of dimers due to intermolecular H-bonds of C—H···O type, where O-atom is of carbonyl and H-atom is of the nitrophenyl group. This H-bondings form a R22(14) (Fig. 2) ring motif (Bernstein et al., 1995). The same type of H-bonding between methyl and nitro groups consolidate the molecules in the form of one-dimensional polymers with R22(26) ring motifs and extending along the [1 0 1] direction. Moreover there are π···π stacking interactions between the benzene and thiophene rings with centroid-centroid distances of 3.7263 (14)–3.7487 (14) Å.
Experimental
A solution of 3-acetyl-2,5-dimethythiophene (0.38 g, 2.5 mmol) and 3-nitro-benzaldehyde (0.37 g, 2.5 mmol) in ethanolic solution of NaOH (3.0 g in 10 ml of methanol) was stirred for 16 h at room temperature. The solution was poured into ice cold water of pH=2 (pH adjusted by HCl). The solid separated was filtered and crystallized from methanol:chloroform to affoard light yellow prisms of (I).
Yield: 78%; m.p. 403–404 K.
IR (KBr) νmax cm-1: 3012 (Ar—H), 2926 (C—H), 1628 (C═O), 1568 (C═C).
1H NMR (DMSO-d6) (δ/p.p.m.): 8.47 (d, J = 1.8 Hz), 8.23 (d, J = 1.2 Hz), 7.73 (d, C═CH, J = 15.6 Hz), 7.40 (d, CH═C, J = 15.6 Hz), 7.89(d, J=7.2 Hz), 7.61 (d, J = 7.8 Hz), 7.27 (s, Ar—H), 2.72 (s, CH3), 2.39 (s, CH3).
Refinement
The H atoms were positioned geometrically (C–H = 0.93–0.96 Å) and refined as riding with Uiso(H) = xUeq(C), where x = 1.5 for methyl and x = 1.2 for aryl H-atoms.
Figures
Fig. 1.
View of the title molecule with displacement ellipsoids drawn at the 50% probability level. H-atoms are shown as small spheres of arbitrary radii.
Fig. 2.
The partial packing (PLATON; Spek, 2009) showing the [1 0 1] tapes via R22(14) and R22(26) hydrogen-bond motifs.
Crystal data
| C15H13NO3S | F(000) = 600 |
| Mr = 287.32 | Dx = 1.402 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 1493 reflections |
| a = 7.3802 (5) Å | θ = 2.1–25.3° |
| b = 13.7973 (9) Å | µ = 0.24 mm−1 |
| c = 13.4638 (8) Å | T = 296 K |
| β = 96.997 (3)° | Prism, yellow |
| V = 1360.77 (15) Å3 | 0.25 × 0.22 × 0.20 mm |
| Z = 4 |
Data collection
| Bruker KAPPA APEXII CCD diffractometer | 2466 independent reflections |
| Radiation source: fine-focus sealed tube | 1493 reflections with I > 2σ(I) |
| graphite | Rint = 0.051 |
| Detector resolution: 8.10 pixels mm-1 | θmax = 25.3°, θmin = 2.1° |
| ω scans | h = −8→8 |
| Absorption correction: multi-scan (SADABS; Bruker, 2005) | k = −13→16 |
| Tmin = 0.945, Tmax = 0.955 | l = −16→16 |
| 10732 measured reflections |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.117 | H-atom parameters constrained |
| S = 1.03 | w = 1/[σ2(Fo2) + (0.0498P)2 + 0.0228P] where P = (Fo2 + 2Fc2)/3 |
| 2466 reflections | (Δ/σ)max < 0.001 |
| 183 parameters | Δρmax = 0.17 e Å−3 |
| 0 restraints | Δρmin = −0.25 e Å−3 |
Special details
| Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| S1 | 0.21173 (10) | 0.46796 (5) | 0.18440 (5) | 0.0520 (3) | |
| O1 | 0.4422 (3) | −0.10573 (18) | 0.51656 (15) | 0.0876 (10) | |
| O2 | 0.5017 (3) | −0.25617 (17) | 0.49723 (15) | 0.0892 (10) | |
| O3 | 0.0404 (3) | 0.17111 (14) | 0.06130 (14) | 0.0744 (8) | |
| N1 | 0.4392 (3) | −0.1786 (2) | 0.46575 (18) | 0.0607 (10) | |
| C1 | 0.2331 (3) | −0.07879 (19) | 0.22025 (18) | 0.0413 (9) | |
| C2 | 0.3105 (3) | −0.08450 (19) | 0.32014 (17) | 0.0431 (9) | |
| C3 | 0.3587 (3) | −0.17332 (19) | 0.36030 (18) | 0.0444 (9) | |
| C4 | 0.3343 (4) | −0.2574 (2) | 0.3066 (2) | 0.0577 (11) | |
| C5 | 0.2586 (4) | −0.2528 (2) | 0.2088 (2) | 0.0618 (11) | |
| C6 | 0.2074 (4) | −0.1642 (2) | 0.1663 (2) | 0.0530 (10) | |
| C7 | 0.1775 (3) | 0.01281 (19) | 0.17143 (19) | 0.0457 (10) | |
| C8 | 0.2028 (4) | 0.10257 (19) | 0.20395 (18) | 0.0490 (10) | |
| C9 | 0.1319 (4) | 0.1860 (2) | 0.14180 (18) | 0.0491 (10) | |
| C10 | 0.1748 (3) | 0.28475 (18) | 0.17826 (18) | 0.0419 (9) | |
| C11 | 0.1514 (3) | 0.36459 (18) | 0.11758 (18) | 0.0438 (9) | |
| C12 | 0.0882 (4) | 0.3718 (2) | 0.00750 (18) | 0.0616 (11) | |
| C13 | 0.2414 (3) | 0.31061 (19) | 0.27906 (17) | 0.0439 (9) | |
| C14 | 0.2659 (3) | 0.40587 (19) | 0.29503 (17) | 0.0433 (9) | |
| C15 | 0.3299 (4) | 0.4582 (2) | 0.39024 (19) | 0.0597 (11) | |
| H2 | 0.32910 | −0.02870 | 0.35879 | 0.0517* | |
| H4 | 0.36845 | −0.31670 | 0.33608 | 0.0691* | |
| H5 | 0.24165 | −0.30911 | 0.17094 | 0.0742* | |
| H6 | 0.15459 | −0.16188 | 0.10004 | 0.0636* | |
| H7 | 0.11464 | 0.00698 | 0.10753 | 0.0548* | |
| H8 | 0.26607 | 0.11362 | 0.26696 | 0.0588* | |
| H12A | −0.04283 | 0.37068 | −0.00322 | 0.0925* | |
| H12B | 0.13538 | 0.31800 | −0.02658 | 0.0925* | |
| H12C | 0.13152 | 0.43128 | −0.01806 | 0.0925* | |
| H13 | 0.26568 | 0.26483 | 0.32962 | 0.0527* | |
| H15A | 0.45201 | 0.48132 | 0.38808 | 0.0894* | |
| H15B | 0.32800 | 0.41479 | 0.44581 | 0.0894* | |
| H15C | 0.25052 | 0.51215 | 0.39790 | 0.0894* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| S1 | 0.0670 (5) | 0.0373 (4) | 0.0511 (4) | 0.0052 (4) | 0.0043 (3) | 0.0067 (3) |
| O1 | 0.132 (2) | 0.0787 (18) | 0.0482 (13) | 0.0074 (15) | −0.0048 (13) | −0.0029 (13) |
| O2 | 0.120 (2) | 0.0730 (16) | 0.0699 (16) | 0.0207 (15) | −0.0078 (14) | 0.0294 (13) |
| O3 | 0.1077 (17) | 0.0512 (13) | 0.0544 (12) | −0.0006 (12) | −0.0302 (12) | 0.0031 (10) |
| N1 | 0.0710 (17) | 0.0627 (19) | 0.0483 (16) | 0.0049 (15) | 0.0073 (12) | 0.0161 (15) |
| C1 | 0.0439 (16) | 0.0344 (15) | 0.0453 (15) | −0.0035 (13) | 0.0037 (12) | 0.0001 (13) |
| C2 | 0.0515 (17) | 0.0361 (16) | 0.0420 (15) | 0.0013 (13) | 0.0067 (12) | −0.0021 (13) |
| C3 | 0.0471 (17) | 0.0411 (17) | 0.0445 (15) | −0.0004 (14) | 0.0036 (12) | 0.0072 (14) |
| C4 | 0.067 (2) | 0.0354 (17) | 0.069 (2) | 0.0034 (15) | 0.0018 (16) | 0.0096 (16) |
| C5 | 0.079 (2) | 0.0352 (17) | 0.068 (2) | −0.0013 (16) | −0.0044 (17) | −0.0073 (15) |
| C6 | 0.0605 (19) | 0.0453 (18) | 0.0500 (16) | −0.0025 (15) | −0.0066 (14) | −0.0031 (15) |
| C7 | 0.0500 (17) | 0.0423 (18) | 0.0429 (16) | −0.0023 (14) | −0.0016 (12) | 0.0036 (13) |
| C8 | 0.0639 (19) | 0.0420 (18) | 0.0384 (15) | 0.0004 (14) | −0.0047 (13) | 0.0029 (13) |
| C9 | 0.0582 (18) | 0.0476 (18) | 0.0396 (15) | 0.0023 (14) | −0.0015 (14) | 0.0062 (14) |
| C10 | 0.0518 (17) | 0.0342 (16) | 0.0382 (14) | 0.0054 (12) | −0.0003 (12) | 0.0064 (12) |
| C11 | 0.0500 (17) | 0.0415 (16) | 0.0396 (14) | 0.0085 (13) | 0.0038 (12) | 0.0040 (13) |
| C12 | 0.084 (2) | 0.0536 (19) | 0.0449 (16) | 0.0124 (16) | −0.0011 (15) | 0.0121 (14) |
| C13 | 0.0527 (17) | 0.0402 (17) | 0.0376 (15) | 0.0000 (13) | 0.0006 (12) | 0.0106 (12) |
| C14 | 0.0451 (16) | 0.0408 (17) | 0.0432 (15) | 0.0011 (13) | 0.0023 (12) | 0.0023 (13) |
| C15 | 0.073 (2) | 0.0519 (19) | 0.0524 (17) | −0.0011 (16) | 0.0008 (15) | −0.0062 (14) |
Geometric parameters (Å, °)
| S1—C11 | 1.716 (3) | C10—C13 | 1.431 (3) |
| S1—C14 | 1.723 (2) | C11—C12 | 1.502 (3) |
| O1—N1 | 1.215 (4) | C13—C14 | 1.341 (4) |
| O2—N1 | 1.221 (4) | C14—C15 | 1.497 (4) |
| O3—C9 | 1.223 (3) | C2—H2 | 0.9300 |
| N1—C3 | 1.473 (3) | C4—H4 | 0.9300 |
| C1—C2 | 1.398 (3) | C5—H5 | 0.9300 |
| C1—C6 | 1.385 (4) | C6—H6 | 0.9300 |
| C1—C7 | 1.460 (4) | C7—H7 | 0.9300 |
| C2—C3 | 1.369 (4) | C8—H8 | 0.9300 |
| C3—C4 | 1.367 (4) | C12—H12A | 0.9600 |
| C4—C5 | 1.368 (4) | C12—H12B | 0.9600 |
| C5—C6 | 1.383 (4) | C12—H12C | 0.9600 |
| C7—C8 | 1.319 (4) | C13—H13 | 0.9300 |
| C8—C9 | 1.481 (4) | C15—H15A | 0.9600 |
| C9—C10 | 1.470 (4) | C15—H15B | 0.9600 |
| C10—C11 | 1.370 (3) | C15—H15C | 0.9600 |
| C11—S1—C14 | 93.33 (12) | C13—C14—C15 | 129.3 (2) |
| O1—N1—O2 | 123.4 (2) | C1—C2—H2 | 120.00 |
| O1—N1—C3 | 118.7 (2) | C3—C2—H2 | 120.00 |
| O2—N1—C3 | 118.0 (2) | C3—C4—H4 | 121.00 |
| C2—C1—C6 | 118.1 (2) | C5—C4—H4 | 121.00 |
| C2—C1—C7 | 122.8 (2) | C4—C5—H5 | 120.00 |
| C6—C1—C7 | 119.2 (2) | C6—C5—H5 | 120.00 |
| C1—C2—C3 | 119.1 (2) | C1—C6—H6 | 119.00 |
| N1—C3—C2 | 118.7 (2) | C5—C6—H6 | 119.00 |
| N1—C3—C4 | 118.7 (2) | C1—C7—H7 | 115.00 |
| C2—C3—C4 | 122.7 (2) | C8—C7—H7 | 115.00 |
| C3—C4—C5 | 118.8 (3) | C7—C8—H8 | 119.00 |
| C4—C5—C6 | 119.9 (3) | C9—C8—H8 | 119.00 |
| C1—C6—C5 | 121.5 (2) | C11—C12—H12A | 109.00 |
| C1—C7—C8 | 130.0 (2) | C11—C12—H12B | 109.00 |
| C7—C8—C9 | 121.1 (2) | C11—C12—H12C | 109.00 |
| O3—C9—C8 | 119.3 (2) | H12A—C12—H12B | 109.00 |
| O3—C9—C10 | 121.7 (2) | H12A—C12—H12C | 109.00 |
| C8—C9—C10 | 119.0 (2) | H12B—C12—H12C | 109.00 |
| C9—C10—C11 | 122.7 (2) | C10—C13—H13 | 123.00 |
| C9—C10—C13 | 125.7 (2) | C14—C13—H13 | 123.00 |
| C11—C10—C13 | 111.7 (2) | C14—C15—H15A | 110.00 |
| S1—C11—C10 | 110.48 (18) | C14—C15—H15B | 109.00 |
| S1—C11—C12 | 119.47 (19) | C14—C15—H15C | 109.00 |
| C10—C11—C12 | 130.0 (2) | H15A—C15—H15B | 110.00 |
| C10—C13—C14 | 114.9 (2) | H15A—C15—H15C | 109.00 |
| S1—C14—C13 | 109.66 (18) | H15B—C15—H15C | 109.00 |
| S1—C14—C15 | 121.10 (19) | ||
| C14—S1—C11—C10 | −0.85 (19) | C3—C4—C5—C6 | −0.4 (4) |
| C14—S1—C11—C12 | −179.6 (2) | C4—C5—C6—C1 | 0.9 (4) |
| C11—S1—C14—C13 | 1.22 (19) | C1—C7—C8—C9 | −179.2 (2) |
| C11—S1—C14—C15 | −178.9 (2) | C7—C8—C9—O3 | 3.8 (4) |
| O1—N1—C3—C2 | 7.8 (3) | C7—C8—C9—C10 | −175.7 (2) |
| O1—N1—C3—C4 | −171.9 (2) | O3—C9—C10—C11 | −14.6 (4) |
| O2—N1—C3—C2 | −171.3 (2) | O3—C9—C10—C13 | 164.2 (3) |
| O2—N1—C3—C4 | 9.0 (3) | C8—C9—C10—C11 | 164.9 (2) |
| C6—C1—C2—C3 | 0.5 (3) | C8—C9—C10—C13 | −16.3 (4) |
| C7—C1—C2—C3 | 179.9 (2) | C9—C10—C11—S1 | 179.2 (2) |
| C2—C1—C6—C5 | −0.9 (4) | C9—C10—C11—C12 | −2.3 (4) |
| C7—C1—C6—C5 | 179.6 (2) | C13—C10—C11—S1 | 0.3 (2) |
| C2—C1—C7—C8 | 7.4 (4) | C13—C10—C11—C12 | 178.8 (2) |
| C6—C1—C7—C8 | −173.2 (3) | C9—C10—C13—C14 | −178.2 (2) |
| C1—C2—C3—N1 | −179.7 (2) | C11—C10—C13—C14 | 0.7 (3) |
| C1—C2—C3—C4 | 0.0 (4) | C10—C13—C14—S1 | −1.3 (3) |
| N1—C3—C4—C5 | 179.6 (2) | C10—C13—C14—C15 | 178.9 (2) |
| C2—C3—C4—C5 | 0.0 (4) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C6—H6···O3i | 0.93 | 2.46 | 3.373 (3) | 168 |
| C15—H15B···O2ii | 0.96 | 2.59 | 3.339 (4) | 135 |
Symmetry codes: (i) −x, −y, −z; (ii) −x+1, −y, −z+1.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: GK2432).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) text, I. DOI: 10.1107/S1600536811047933/gk2432sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811047933/gk2432Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811047933/gk2432Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


