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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Nov 19;67(Pt 12):o3349. doi: 10.1107/S160053681104829X

4-[(4-Chloro­phen­yl)(hy­droxy)methyl­idene]isochromane-1,3-dione

Akoun Abou a,*, Abdoulaye Djandé b, Bintou Sessouma b, Adama Saba b, Rita Kakou-Yao a
PMCID: PMC3238994  PMID: 22199843

Abstract

In the title compound, C16H9ClO4, the six-membered heterocyclic ring adopts a screw-boat conformation. The benzene rings are oriented to each other at a dihedral angle of 59.26 (9)°. The mol­ecular structure exhibits a ring motif, viz. S(6), owing to an intra­molecular O—H⋯O hydrogen bond. The presence of C—H⋯O contacts generates an infinite chain along [001]. Also present are π–π stacking inter­actions between neighbouring isochromanedione benzene rings [centroid–centroid distance = 3.746 (1) Å], and C—O⋯π inter­actions [O⋯centroid = 3.934 (2) Å].

Related literature

For the biological activity of isochromanones, see: Bianchi et al. (2004); Buntin et al. (2008). For π–π stacking inter­actions, see: Janiak (2000). For hydrogen-bond motifs, see: Bernstein et al. (1995). For puckering parameters, see: Cremer & Pople (1975).graphic file with name e-67-o3349-scheme1.jpg

Experimental

Crystal data

  • C16H9ClO4

  • M r = 300.68

  • Monoclinic, Inline graphic

  • a = 15.4973 (4) Å

  • b = 5.9631 (1) Å

  • c = 14.4526 (3) Å

  • β = 102.661 (1)°

  • V = 1303.12 (5) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.31 mm−1

  • T = 298 K

  • 0.40 × 0.30 × 0.20 mm

Data collection

  • Nonius KappaCCD diffractometer

  • 12213 measured reflections

  • 3248 independent reflections

  • 2693 reflections with I > 2σ(I)

  • R int = 0.037

Refinement

  • R[F 2 > 2σ(F 2)] = 0.053

  • wR(F 2) = 0.163

  • S = 1.08

  • 3248 reflections

  • 191 parameters

  • H-atom parameters constrained

  • Δρmax = 0.25 e Å−3

  • Δρmin = −0.31 e Å−3

Data collection: COLLECT (Nonius, 2001); cell refinement: DENZO/SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO/SCALEPACK; program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97, publCIF (Westrip, 2010) and WinGX (Farrugia, 1999).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681104829X/tk5016sup1.cif

e-67-o3349-sup1.cif (23.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681104829X/tk5016Isup2.hkl

e-67-o3349-Isup2.hkl (156.2KB, hkl)

Supplementary material file. DOI: 10.1107/S160053681104829X/tk5016Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O14—H14⋯O12 0.82 1.76 2.492 (2) 148
C3—H3⋯O11i 0.93 2.56 3.288 (2) 136

Symmetry code: (i) Inline graphic.

Acknowledgments

We thank the Laboratoire de Physique des Inter­actions Ioniques et Spectropôle, Université de Provence, and Université Paul Cézanne, Faculté des Sciences et Techniques de Saint Jérôme, Marseille, France, for the use of their facilities.

supplementary crystallographic information

Comment

The title molecule is related to isochromanone derivatives that are generally known as regulators of plant growth (Bianchi et al., 2004). Depending on their chemical structure and concentration they can act either as inhibitors or stimulators of these processes. Some substituted isochromanones isolated from myxobacteria strains were introduced as anti-fungal agents (Buntin et al., 2008).

The structure of the title compound (I) (Fig. 1) consists of two planar benzene rings with the maximum deviations from the best planes of 0.035 (2) Å for atom C1 (benzene ring C1—C6) and ±0.007 (2) Å for atoms C15 and C16 (benzene ring C15—C20). An S(6) ring motif (Bernstein et al., 1995), arises from an intramolecular O—H···O hydrogen bond to generate a planar pseudo six-membered ring (maximum deviation from planarity being 0.059 (2) Å for atom C13) to result in a tricyclic ring system (Fig. 1). The dihedral angles between two benzene rings is 59.26 (9) and that between the pseudo six-membered ring and benzene ring C1—C6 is 13.65 (9) °. The heterocyclic ring C1/C6/C7/O8/C9/C10 adopts a screw-boat conformation as judged from the puckering parameters (Cremer & Pople, 1975): Q = 0.0952 (19) Å, θ = 67.5 (11)° and φ = 228.4 (12)°. Furthermore, intermolecular C—H···O contacts (Table 1) link molecules into infinite chains through along [001] (Fig. 2).

The supramolecular aggregation is completed by the presence of C—O···π interactions (O12···Cg3[x,1/2 - y,-1/2 + z] = 3.934 (2) Å, C9—O12···Cg3 = 83.48 (12)°, where Cg3 is the centroid of the benzene ring C15—C20, and π–π stacking between two parallel isochromanedione-benzene C1—C6 rings; in the latter, the centroid···centroid distance, (Cg2···Cg2 (-x,-y,-z) of 3.746 (1) Å), is less than 3.8 Å, the maximum regarded as relevant for π–π interactions (Janiak, 2000) (Fig.3).

Experimental

To a solution of 4-chlorobenzoyl chloride (4.10 -2 mol) in dry tetrahydrofuran (150 ml ), was added dried triethylamine (0.12 mol) and homophthalic anhydride (4.10 -2 mol) in small portions over 30 min. The mixture was then refluxed for 3 h and poured in 300 ml of chloroform. The solution was acidified with dilute hydrochloric acid until the pH was 2 - 3. The organic layer was extracted, washed with water, dried over MgSO4 and the solvent removed. The crude product was recrystallized from a chloroform-hexane (1/1, v/v) mixture. Yellow crystals were obtained in a good yield: 90%; M.pt. 432–433 K.

Refinement

H atoms were placed in calculated positions (O—H = 0.82 Å and C—H = 0.93 Å) and refined using a riding model approximation with Uiso(H) constrained to 1.2 (aromatic) or 1.5 (O—H) times Ueq of the respective parent atom.

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I) showing the atomic labeling scheme with displacement ellipsoids drawn at the 50% probability level. H atoms are shown as spheres of arbitrary radius. Dashed lines indicate an hydrogen bond.

Fig. 2.

Fig. 2.

Crystal packing, viewed down the b axis, showing parallel chains along the c direction. Dashed lines indicate C—H···O contacts. H atoms not involved in hydrogen bonds have been omitted for clarity.

Fig. 3.

Fig. 3.

A view of the crystal packing, showing C—O···π and π–π stacking interactions (dashed lines). The yellow dots are centroids of rings. H atoms have been omitted for clarity.

Crystal data

C16H9ClO4 F(000) = 616
Mr = 300.68 Dx = 1.533 Mg m3
Monoclinic, P21/c Melting point = 432–433 K
Hall symbol: -P 2ybc Mo Kα radiation, λ = 0.71073 Å
a = 15.4973 (4) Å Cell parameters from 12213 reflections
b = 5.9631 (1) Å θ = 1.4–29.0°
c = 14.4526 (3) Å µ = 0.31 mm1
β = 102.661 (1)° T = 298 K
V = 1303.12 (5) Å3 Prism, yellow
Z = 4 0.40 × 0.30 × 0.20 mm

Data collection

Nonius KappaCCD diffractometer 2693 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube Rint = 0.037
graphite θmax = 29.0°, θmin = 1.4°
φ and ω scans h = −20→20
12213 measured reflections k = −7→7
3248 independent reflections l = −19→19

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.163 H-atom parameters constrained
S = 1.08 w = 1/[σ2(Fo2) + (0.085P)2 + 0.4082P] where P = (Fo2 + 2Fc2)/3
3248 reflections (Δ/σ)max < 0.001
191 parameters Δρmax = 0.25 e Å3
0 restraints Δρmin = −0.31 e Å3
36 constraints

Special details

Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Cl21 0.46136 (4) 0.22385 (12) 0.41605 (4) 0.0768 (3)
O8 0.15001 (11) 0.2734 (3) −0.20791 (9) 0.0600 (4)
C1 0.16846 (10) 0.1431 (3) −0.01749 (10) 0.0355 (3)
C6 0.11986 (11) 0.0094 (3) −0.09040 (10) 0.0412 (4)
O12 0.22812 (11) 0.5783 (3) −0.16990 (11) 0.0688 (5)
C2 0.16289 (11) 0.0881 (3) 0.07551 (10) 0.0391 (4)
H2 0.1898 0.1804 0.1254 0.047*
C10 0.21737 (11) 0.3377 (3) −0.04175 (11) 0.0401 (4)
O14 0.30865 (10) 0.6583 (2) −0.00417 (11) 0.0631 (4)
H14 0.2881 0.6813 −0.0606 0.095*
C7 0.11070 (14) 0.0730 (3) −0.18995 (12) 0.0525 (5)
C13 0.27868 (11) 0.4635 (3) 0.02079 (13) 0.0437 (4)
C19 0.40760 (12) 0.1419 (3) 0.22901 (14) 0.0479 (4)
H19 0.4368 0.0053 0.2416 0.057*
O11 0.07046 (13) −0.0255 (3) −0.25801 (10) 0.0769 (5)
C5 0.07423 (13) −0.1807 (3) −0.07083 (13) 0.0507 (4)
H5 0.0429 −0.2681 −0.1203 0.061*
C4 0.07567 (13) −0.2382 (3) 0.02135 (15) 0.0521 (5)
H4 0.0482 −0.3690 0.0349 0.062*
C16 0.32267 (13) 0.5515 (3) 0.19262 (14) 0.0504 (4)
H16 0.2949 0.6900 0.1802 0.060*
C15 0.32154 (11) 0.4012 (3) 0.11887 (12) 0.0413 (4)
C20 0.36492 (12) 0.1967 (3) 0.13808 (13) 0.0452 (4)
H20 0.3651 0.0961 0.0889 0.054*
C17 0.36473 (13) 0.4967 (3) 0.28416 (14) 0.0547 (5)
H17 0.3648 0.5966 0.3336 0.066*
C3 0.11838 (12) −0.1000 (3) 0.09398 (12) 0.0454 (4)
H3 0.1169 −0.1350 0.1563 0.054*
C18 0.40658 (12) 0.2924 (3) 0.30156 (13) 0.0484 (4)
C9 0.19987 (13) 0.4065 (3) −0.13974 (12) 0.0499 (4)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Cl21 0.0704 (4) 0.1024 (5) 0.0503 (3) 0.0049 (3) −0.0029 (3) 0.0100 (3)
O8 0.0778 (10) 0.0730 (10) 0.0291 (6) 0.0145 (7) 0.0118 (6) 0.0079 (6)
C1 0.0389 (7) 0.0382 (8) 0.0293 (7) 0.0059 (6) 0.0070 (6) −0.0002 (5)
C6 0.0459 (8) 0.0452 (9) 0.0303 (7) 0.0107 (7) 0.0032 (6) −0.0060 (6)
O12 0.0821 (11) 0.0719 (10) 0.0570 (8) 0.0075 (8) 0.0251 (7) 0.0298 (7)
C2 0.0427 (8) 0.0448 (9) 0.0290 (7) −0.0061 (6) 0.0059 (6) −0.0030 (6)
C10 0.0452 (8) 0.0422 (8) 0.0347 (7) 0.0065 (6) 0.0124 (6) 0.0057 (6)
O14 0.0663 (9) 0.0489 (8) 0.0720 (10) −0.0103 (7) 0.0107 (7) 0.0188 (7)
C7 0.0646 (11) 0.0585 (11) 0.0313 (8) 0.0215 (9) 0.0034 (7) −0.0057 (7)
C13 0.0444 (8) 0.0379 (8) 0.0508 (9) 0.0024 (6) 0.0147 (7) 0.0074 (7)
C19 0.0424 (8) 0.0427 (9) 0.0569 (10) 0.0037 (7) 0.0075 (7) 0.0054 (7)
O11 0.1078 (13) 0.0786 (11) 0.0337 (7) 0.0195 (9) −0.0076 (7) −0.0149 (7)
C5 0.0531 (10) 0.0472 (10) 0.0456 (9) 0.0004 (8) −0.0030 (7) −0.0133 (7)
C4 0.0534 (10) 0.0446 (10) 0.0550 (11) −0.0112 (8) 0.0052 (8) −0.0023 (8)
C16 0.0512 (10) 0.0372 (9) 0.0597 (11) 0.0044 (7) 0.0056 (8) −0.0054 (7)
C15 0.0384 (8) 0.0365 (8) 0.0483 (9) −0.0032 (6) 0.0081 (7) 0.0014 (6)
C20 0.0472 (9) 0.0387 (9) 0.0493 (9) 0.0025 (7) 0.0097 (7) −0.0033 (7)
C17 0.0549 (11) 0.0544 (11) 0.0523 (10) 0.0022 (8) 0.0068 (8) −0.0133 (8)
C3 0.0476 (9) 0.0502 (10) 0.0376 (8) −0.0064 (7) 0.0074 (7) 0.0035 (7)
C18 0.0384 (8) 0.0576 (11) 0.0473 (9) −0.0039 (7) 0.0054 (7) 0.0028 (8)
C9 0.0552 (10) 0.0583 (11) 0.0392 (8) 0.0153 (8) 0.0171 (7) 0.0120 (7)

Geometric parameters (Å, °)

Cl21—C18 1.7349 (19) C13—C15 1.475 (2)
O8—C9 1.365 (3) C19—C20 1.375 (3)
O8—C7 1.391 (3) C19—C18 1.383 (3)
C1—C6 1.402 (2) C19—H19 0.9300
C1—C2 1.405 (2) C5—C4 1.371 (3)
C1—C10 1.469 (2) C5—H5 0.9300
C6—C5 1.397 (3) C4—C3 1.384 (3)
C6—C7 1.465 (2) C4—H4 0.9300
O12—C9 1.231 (2) C16—C17 1.380 (3)
C2—C3 1.373 (2) C16—C15 1.390 (2)
C2—H2 0.9300 C16—H16 0.9300
C10—C13 1.381 (2) C15—C20 1.390 (2)
C10—C9 1.442 (2) C20—H20 0.9300
O14—C13 1.330 (2) C17—C18 1.377 (3)
O14—H14 0.8200 C17—H17 0.9300
C7—O11 1.197 (2) C3—H3 0.9300
C9—O8—C7 124.50 (14) C6—C5—H5 120.1
C6—C1—C2 116.77 (15) C5—C4—C3 119.43 (17)
C6—C1—C10 119.35 (14) C5—C4—H4 120.3
C2—C1—C10 123.78 (14) C3—C4—H4 120.3
C5—C6—C1 121.45 (15) C17—C16—C15 120.40 (17)
C5—C6—C7 117.68 (16) C17—C16—H16 119.8
C1—C6—C7 120.75 (17) C15—C16—H16 119.8
C3—C2—C1 121.06 (15) C16—C15—C20 119.22 (16)
C3—C2—H2 119.5 C16—C15—C13 120.09 (16)
C1—C2—H2 119.5 C20—C15—C13 120.61 (16)
C13—C10—C9 116.26 (16) C19—C20—C15 120.63 (17)
C13—C10—C1 126.15 (14) C19—C20—H20 119.7
C9—C10—C1 117.58 (15) C15—C20—H20 119.7
C13—O14—H14 109.5 C18—C17—C16 119.31 (18)
O11—C7—O8 116.02 (18) C18—C17—H17 120.3
O11—C7—C6 127.0 (2) C16—C17—H17 120.3
O8—C7—C6 116.98 (16) C2—C3—C4 121.07 (16)
O14—C13—C10 121.90 (16) C2—C3—H3 119.5
O14—C13—C15 111.74 (16) C4—C3—H3 119.5
C10—C13—C15 126.31 (15) C17—C18—C19 121.25 (18)
C20—C19—C18 119.17 (17) C17—C18—Cl21 119.68 (16)
C20—C19—H19 120.4 C19—C18—Cl21 119.05 (15)
C18—C19—H19 120.4 O12—C9—O8 114.66 (16)
C4—C5—C6 119.89 (16) O12—C9—C10 125.43 (19)
C4—C5—H5 120.1 O8—C9—C10 119.89 (17)
C2—C1—C6—C5 −5.3 (2) C17—C16—C15—C20 −1.4 (3)
C10—C1—C6—C5 178.26 (15) C17—C16—C15—C13 −178.23 (17)
C2—C1—C6—C7 170.79 (15) O14—C13—C15—C16 52.6 (2)
C10—C1—C6—C7 −5.7 (2) C10—C13—C15—C16 −129.9 (2)
C6—C1—C2—C3 5.7 (2) O14—C13—C15—C20 −124.18 (18)
C10—C1—C2—C3 −177.98 (15) C10—C13—C15—C20 53.3 (2)
C6—C1—C10—C13 −169.15 (16) C18—C19—C20—C15 0.3 (3)
C2—C1—C10—C13 14.6 (3) C16—C15—C20—C19 0.8 (3)
C6—C1—C10—C9 11.3 (2) C13—C15—C20—C19 177.65 (16)
C2—C1—C10—C9 −164.88 (16) C15—C16—C17—C18 0.8 (3)
C9—O8—C7—O11 −178.66 (18) C1—C2—C3—C4 −1.7 (3)
C9—O8—C7—C6 3.6 (3) C5—C4—C3—C2 −3.1 (3)
C5—C6—C7—O11 −3.0 (3) C16—C17—C18—C19 0.3 (3)
C1—C6—C7—O11 −179.20 (19) C16—C17—C18—Cl21 178.84 (15)
C5—C6—C7—O8 174.43 (15) C20—C19—C18—C17 −0.9 (3)
C1—C6—C7—O8 −1.8 (2) C20—C19—C18—Cl21 −179.41 (14)
C9—C10—C13—O14 11.1 (3) C7—O8—C9—O12 −179.24 (16)
C1—C10—C13—O14 −168.40 (16) C7—O8—C9—C10 2.3 (3)
C9—C10—C13—C15 −166.14 (16) C13—C10—C9—O12 −7.6 (3)
C1—C10—C13—C15 14.3 (3) C1—C10—C9—O12 172.00 (17)
C1—C6—C5—C4 0.7 (3) C13—C10—C9—O8 170.70 (16)
C7—C6—C5—C4 −175.45 (18) C1—C10—C9—O8 −9.7 (2)
C6—C5—C4—C3 3.6 (3)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O14—H14···O12 0.82 1.76 2.492 (2) 148
C3—H3···O11i 0.93 2.56 3.288 (2) 136

Symmetry codes: (i) x, −y−1/2, z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: TK5016).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681104829X/tk5016sup1.cif

e-67-o3349-sup1.cif (23.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681104829X/tk5016Isup2.hkl

e-67-o3349-Isup2.hkl (156.2KB, hkl)

Supplementary material file. DOI: 10.1107/S160053681104829X/tk5016Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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