Abstract
In the title compound, C16H9ClO4, the six-membered heterocyclic ring adopts a screw-boat conformation. The benzene rings are oriented to each other at a dihedral angle of 59.26 (9)°. The molecular structure exhibits a ring motif, viz. S(6), owing to an intramolecular O—H⋯O hydrogen bond. The presence of C—H⋯O contacts generates an infinite chain along [001]. Also present are π–π stacking interactions between neighbouring isochromanedione benzene rings [centroid–centroid distance = 3.746 (1) Å], and C—O⋯π interactions [O⋯centroid = 3.934 (2) Å].
Related literature
For the biological activity of isochromanones, see: Bianchi et al. (2004 ▶); Buntin et al. (2008 ▶). For π–π stacking interactions, see: Janiak (2000 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶).
Experimental
Crystal data
C16H9ClO4
M r = 300.68
Monoclinic,
a = 15.4973 (4) Å
b = 5.9631 (1) Å
c = 14.4526 (3) Å
β = 102.661 (1)°
V = 1303.12 (5) Å3
Z = 4
Mo Kα radiation
μ = 0.31 mm−1
T = 298 K
0.40 × 0.30 × 0.20 mm
Data collection
Nonius KappaCCD diffractometer
12213 measured reflections
3248 independent reflections
2693 reflections with I > 2σ(I)
R int = 0.037
Refinement
R[F 2 > 2σ(F 2)] = 0.053
wR(F 2) = 0.163
S = 1.08
3248 reflections
191 parameters
H-atom parameters constrained
Δρmax = 0.25 e Å−3
Δρmin = −0.31 e Å−3
Data collection: COLLECT (Nonius, 2001 ▶); cell refinement: DENZO/SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO/SCALEPACK; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97, publCIF (Westrip, 2010 ▶) and WinGX (Farrugia, 1999 ▶).
Supplementary Material
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681104829X/tk5016sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681104829X/tk5016Isup2.hkl
Supplementary material file. DOI: 10.1107/S160053681104829X/tk5016Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O14—H14⋯O12 | 0.82 | 1.76 | 2.492 (2) | 148 |
| C3—H3⋯O11i | 0.93 | 2.56 | 3.288 (2) | 136 |
Symmetry code: (i)
.
Acknowledgments
We thank the Laboratoire de Physique des Interactions Ioniques et Spectropôle, Université de Provence, and Université Paul Cézanne, Faculté des Sciences et Techniques de Saint Jérôme, Marseille, France, for the use of their facilities.
supplementary crystallographic information
Comment
The title molecule is related to isochromanone derivatives that are generally known as regulators of plant growth (Bianchi et al., 2004). Depending on their chemical structure and concentration they can act either as inhibitors or stimulators of these processes. Some substituted isochromanones isolated from myxobacteria strains were introduced as anti-fungal agents (Buntin et al., 2008).
The structure of the title compound (I) (Fig. 1) consists of two planar benzene rings with the maximum deviations from the best planes of 0.035 (2) Å for atom C1 (benzene ring C1—C6) and ±0.007 (2) Å for atoms C15 and C16 (benzene ring C15—C20). An S(6) ring motif (Bernstein et al., 1995), arises from an intramolecular O—H···O hydrogen bond to generate a planar pseudo six-membered ring (maximum deviation from planarity being 0.059 (2) Å for atom C13) to result in a tricyclic ring system (Fig. 1). The dihedral angles between two benzene rings is 59.26 (9) and that between the pseudo six-membered ring and benzene ring C1—C6 is 13.65 (9) °. The heterocyclic ring C1/C6/C7/O8/C9/C10 adopts a screw-boat conformation as judged from the puckering parameters (Cremer & Pople, 1975): Q = 0.0952 (19) Å, θ = 67.5 (11)° and φ = 228.4 (12)°. Furthermore, intermolecular C—H···O contacts (Table 1) link molecules into infinite chains through along [001] (Fig. 2).
The supramolecular aggregation is completed by the presence of C—O···π interactions (O12···Cg3[x,1/2 - y,-1/2 + z] = 3.934 (2) Å, C9—O12···Cg3 = 83.48 (12)°, where Cg3 is the centroid of the benzene ring C15—C20, and π–π stacking between two parallel isochromanedione-benzene C1—C6 rings; in the latter, the centroid···centroid distance, (Cg2···Cg2 (-x,-y,-z) of 3.746 (1) Å), is less than 3.8 Å, the maximum regarded as relevant for π–π interactions (Janiak, 2000) (Fig.3).
Experimental
To a solution of 4-chlorobenzoyl chloride (4.10 -2 mol) in dry tetrahydrofuran (150 ml ), was added dried triethylamine (0.12 mol) and homophthalic anhydride (4.10 -2 mol) in small portions over 30 min. The mixture was then refluxed for 3 h and poured in 300 ml of chloroform. The solution was acidified with dilute hydrochloric acid until the pH was 2 - 3. The organic layer was extracted, washed with water, dried over MgSO4 and the solvent removed. The crude product was recrystallized from a chloroform-hexane (1/1, v/v) mixture. Yellow crystals were obtained in a good yield: 90%; M.pt. 432–433 K.
Refinement
H atoms were placed in calculated positions (O—H = 0.82 Å and C—H = 0.93 Å) and refined using a riding model approximation with Uiso(H) constrained to 1.2 (aromatic) or 1.5 (O—H) times Ueq of the respective parent atom.
Figures
Fig. 1.
The molecular structure of (I) showing the atomic labeling scheme with displacement ellipsoids drawn at the 50% probability level. H atoms are shown as spheres of arbitrary radius. Dashed lines indicate an hydrogen bond.
Fig. 2.
Crystal packing, viewed down the b axis, showing parallel chains along the c direction. Dashed lines indicate C—H···O contacts. H atoms not involved in hydrogen bonds have been omitted for clarity.
Fig. 3.
A view of the crystal packing, showing C—O···π and π–π stacking interactions (dashed lines). The yellow dots are centroids of rings. H atoms have been omitted for clarity.
Crystal data
| C16H9ClO4 | F(000) = 616 |
| Mr = 300.68 | Dx = 1.533 Mg m−3 |
| Monoclinic, P21/c | Melting point = 432–433 K |
| Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
| a = 15.4973 (4) Å | Cell parameters from 12213 reflections |
| b = 5.9631 (1) Å | θ = 1.4–29.0° |
| c = 14.4526 (3) Å | µ = 0.31 mm−1 |
| β = 102.661 (1)° | T = 298 K |
| V = 1303.12 (5) Å3 | Prism, yellow |
| Z = 4 | 0.40 × 0.30 × 0.20 mm |
Data collection
| Nonius KappaCCD diffractometer | 2693 reflections with I > 2σ(I) |
| Radiation source: fine-focus sealed tube | Rint = 0.037 |
| graphite | θmax = 29.0°, θmin = 1.4° |
| φ and ω scans | h = −20→20 |
| 12213 measured reflections | k = −7→7 |
| 3248 independent reflections | l = −19→19 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.053 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.163 | H-atom parameters constrained |
| S = 1.08 | w = 1/[σ2(Fo2) + (0.085P)2 + 0.4082P] where P = (Fo2 + 2Fc2)/3 |
| 3248 reflections | (Δ/σ)max < 0.001 |
| 191 parameters | Δρmax = 0.25 e Å−3 |
| 0 restraints | Δρmin = −0.31 e Å−3 |
| 36 constraints |
Special details
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Cl21 | 0.46136 (4) | 0.22385 (12) | 0.41605 (4) | 0.0768 (3) | |
| O8 | 0.15001 (11) | 0.2734 (3) | −0.20791 (9) | 0.0600 (4) | |
| C1 | 0.16846 (10) | 0.1431 (3) | −0.01749 (10) | 0.0355 (3) | |
| C6 | 0.11986 (11) | 0.0094 (3) | −0.09040 (10) | 0.0412 (4) | |
| O12 | 0.22812 (11) | 0.5783 (3) | −0.16990 (11) | 0.0688 (5) | |
| C2 | 0.16289 (11) | 0.0881 (3) | 0.07551 (10) | 0.0391 (4) | |
| H2 | 0.1898 | 0.1804 | 0.1254 | 0.047* | |
| C10 | 0.21737 (11) | 0.3377 (3) | −0.04175 (11) | 0.0401 (4) | |
| O14 | 0.30865 (10) | 0.6583 (2) | −0.00417 (11) | 0.0631 (4) | |
| H14 | 0.2881 | 0.6813 | −0.0606 | 0.095* | |
| C7 | 0.11070 (14) | 0.0730 (3) | −0.18995 (12) | 0.0525 (5) | |
| C13 | 0.27868 (11) | 0.4635 (3) | 0.02079 (13) | 0.0437 (4) | |
| C19 | 0.40760 (12) | 0.1419 (3) | 0.22901 (14) | 0.0479 (4) | |
| H19 | 0.4368 | 0.0053 | 0.2416 | 0.057* | |
| O11 | 0.07046 (13) | −0.0255 (3) | −0.25801 (10) | 0.0769 (5) | |
| C5 | 0.07423 (13) | −0.1807 (3) | −0.07083 (13) | 0.0507 (4) | |
| H5 | 0.0429 | −0.2681 | −0.1203 | 0.061* | |
| C4 | 0.07567 (13) | −0.2382 (3) | 0.02135 (15) | 0.0521 (5) | |
| H4 | 0.0482 | −0.3690 | 0.0349 | 0.062* | |
| C16 | 0.32267 (13) | 0.5515 (3) | 0.19262 (14) | 0.0504 (4) | |
| H16 | 0.2949 | 0.6900 | 0.1802 | 0.060* | |
| C15 | 0.32154 (11) | 0.4012 (3) | 0.11887 (12) | 0.0413 (4) | |
| C20 | 0.36492 (12) | 0.1967 (3) | 0.13808 (13) | 0.0452 (4) | |
| H20 | 0.3651 | 0.0961 | 0.0889 | 0.054* | |
| C17 | 0.36473 (13) | 0.4967 (3) | 0.28416 (14) | 0.0547 (5) | |
| H17 | 0.3648 | 0.5966 | 0.3336 | 0.066* | |
| C3 | 0.11838 (12) | −0.1000 (3) | 0.09398 (12) | 0.0454 (4) | |
| H3 | 0.1169 | −0.1350 | 0.1563 | 0.054* | |
| C18 | 0.40658 (12) | 0.2924 (3) | 0.30156 (13) | 0.0484 (4) | |
| C9 | 0.19987 (13) | 0.4065 (3) | −0.13974 (12) | 0.0499 (4) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Cl21 | 0.0704 (4) | 0.1024 (5) | 0.0503 (3) | 0.0049 (3) | −0.0029 (3) | 0.0100 (3) |
| O8 | 0.0778 (10) | 0.0730 (10) | 0.0291 (6) | 0.0145 (7) | 0.0118 (6) | 0.0079 (6) |
| C1 | 0.0389 (7) | 0.0382 (8) | 0.0293 (7) | 0.0059 (6) | 0.0070 (6) | −0.0002 (5) |
| C6 | 0.0459 (8) | 0.0452 (9) | 0.0303 (7) | 0.0107 (7) | 0.0032 (6) | −0.0060 (6) |
| O12 | 0.0821 (11) | 0.0719 (10) | 0.0570 (8) | 0.0075 (8) | 0.0251 (7) | 0.0298 (7) |
| C2 | 0.0427 (8) | 0.0448 (9) | 0.0290 (7) | −0.0061 (6) | 0.0059 (6) | −0.0030 (6) |
| C10 | 0.0452 (8) | 0.0422 (8) | 0.0347 (7) | 0.0065 (6) | 0.0124 (6) | 0.0057 (6) |
| O14 | 0.0663 (9) | 0.0489 (8) | 0.0720 (10) | −0.0103 (7) | 0.0107 (7) | 0.0188 (7) |
| C7 | 0.0646 (11) | 0.0585 (11) | 0.0313 (8) | 0.0215 (9) | 0.0034 (7) | −0.0057 (7) |
| C13 | 0.0444 (8) | 0.0379 (8) | 0.0508 (9) | 0.0024 (6) | 0.0147 (7) | 0.0074 (7) |
| C19 | 0.0424 (8) | 0.0427 (9) | 0.0569 (10) | 0.0037 (7) | 0.0075 (7) | 0.0054 (7) |
| O11 | 0.1078 (13) | 0.0786 (11) | 0.0337 (7) | 0.0195 (9) | −0.0076 (7) | −0.0149 (7) |
| C5 | 0.0531 (10) | 0.0472 (10) | 0.0456 (9) | 0.0004 (8) | −0.0030 (7) | −0.0133 (7) |
| C4 | 0.0534 (10) | 0.0446 (10) | 0.0550 (11) | −0.0112 (8) | 0.0052 (8) | −0.0023 (8) |
| C16 | 0.0512 (10) | 0.0372 (9) | 0.0597 (11) | 0.0044 (7) | 0.0056 (8) | −0.0054 (7) |
| C15 | 0.0384 (8) | 0.0365 (8) | 0.0483 (9) | −0.0032 (6) | 0.0081 (7) | 0.0014 (6) |
| C20 | 0.0472 (9) | 0.0387 (9) | 0.0493 (9) | 0.0025 (7) | 0.0097 (7) | −0.0033 (7) |
| C17 | 0.0549 (11) | 0.0544 (11) | 0.0523 (10) | 0.0022 (8) | 0.0068 (8) | −0.0133 (8) |
| C3 | 0.0476 (9) | 0.0502 (10) | 0.0376 (8) | −0.0064 (7) | 0.0074 (7) | 0.0035 (7) |
| C18 | 0.0384 (8) | 0.0576 (11) | 0.0473 (9) | −0.0039 (7) | 0.0054 (7) | 0.0028 (8) |
| C9 | 0.0552 (10) | 0.0583 (11) | 0.0392 (8) | 0.0153 (8) | 0.0171 (7) | 0.0120 (7) |
Geometric parameters (Å, °)
| Cl21—C18 | 1.7349 (19) | C13—C15 | 1.475 (2) |
| O8—C9 | 1.365 (3) | C19—C20 | 1.375 (3) |
| O8—C7 | 1.391 (3) | C19—C18 | 1.383 (3) |
| C1—C6 | 1.402 (2) | C19—H19 | 0.9300 |
| C1—C2 | 1.405 (2) | C5—C4 | 1.371 (3) |
| C1—C10 | 1.469 (2) | C5—H5 | 0.9300 |
| C6—C5 | 1.397 (3) | C4—C3 | 1.384 (3) |
| C6—C7 | 1.465 (2) | C4—H4 | 0.9300 |
| O12—C9 | 1.231 (2) | C16—C17 | 1.380 (3) |
| C2—C3 | 1.373 (2) | C16—C15 | 1.390 (2) |
| C2—H2 | 0.9300 | C16—H16 | 0.9300 |
| C10—C13 | 1.381 (2) | C15—C20 | 1.390 (2) |
| C10—C9 | 1.442 (2) | C20—H20 | 0.9300 |
| O14—C13 | 1.330 (2) | C17—C18 | 1.377 (3) |
| O14—H14 | 0.8200 | C17—H17 | 0.9300 |
| C7—O11 | 1.197 (2) | C3—H3 | 0.9300 |
| C9—O8—C7 | 124.50 (14) | C6—C5—H5 | 120.1 |
| C6—C1—C2 | 116.77 (15) | C5—C4—C3 | 119.43 (17) |
| C6—C1—C10 | 119.35 (14) | C5—C4—H4 | 120.3 |
| C2—C1—C10 | 123.78 (14) | C3—C4—H4 | 120.3 |
| C5—C6—C1 | 121.45 (15) | C17—C16—C15 | 120.40 (17) |
| C5—C6—C7 | 117.68 (16) | C17—C16—H16 | 119.8 |
| C1—C6—C7 | 120.75 (17) | C15—C16—H16 | 119.8 |
| C3—C2—C1 | 121.06 (15) | C16—C15—C20 | 119.22 (16) |
| C3—C2—H2 | 119.5 | C16—C15—C13 | 120.09 (16) |
| C1—C2—H2 | 119.5 | C20—C15—C13 | 120.61 (16) |
| C13—C10—C9 | 116.26 (16) | C19—C20—C15 | 120.63 (17) |
| C13—C10—C1 | 126.15 (14) | C19—C20—H20 | 119.7 |
| C9—C10—C1 | 117.58 (15) | C15—C20—H20 | 119.7 |
| C13—O14—H14 | 109.5 | C18—C17—C16 | 119.31 (18) |
| O11—C7—O8 | 116.02 (18) | C18—C17—H17 | 120.3 |
| O11—C7—C6 | 127.0 (2) | C16—C17—H17 | 120.3 |
| O8—C7—C6 | 116.98 (16) | C2—C3—C4 | 121.07 (16) |
| O14—C13—C10 | 121.90 (16) | C2—C3—H3 | 119.5 |
| O14—C13—C15 | 111.74 (16) | C4—C3—H3 | 119.5 |
| C10—C13—C15 | 126.31 (15) | C17—C18—C19 | 121.25 (18) |
| C20—C19—C18 | 119.17 (17) | C17—C18—Cl21 | 119.68 (16) |
| C20—C19—H19 | 120.4 | C19—C18—Cl21 | 119.05 (15) |
| C18—C19—H19 | 120.4 | O12—C9—O8 | 114.66 (16) |
| C4—C5—C6 | 119.89 (16) | O12—C9—C10 | 125.43 (19) |
| C4—C5—H5 | 120.1 | O8—C9—C10 | 119.89 (17) |
| C2—C1—C6—C5 | −5.3 (2) | C17—C16—C15—C20 | −1.4 (3) |
| C10—C1—C6—C5 | 178.26 (15) | C17—C16—C15—C13 | −178.23 (17) |
| C2—C1—C6—C7 | 170.79 (15) | O14—C13—C15—C16 | 52.6 (2) |
| C10—C1—C6—C7 | −5.7 (2) | C10—C13—C15—C16 | −129.9 (2) |
| C6—C1—C2—C3 | 5.7 (2) | O14—C13—C15—C20 | −124.18 (18) |
| C10—C1—C2—C3 | −177.98 (15) | C10—C13—C15—C20 | 53.3 (2) |
| C6—C1—C10—C13 | −169.15 (16) | C18—C19—C20—C15 | 0.3 (3) |
| C2—C1—C10—C13 | 14.6 (3) | C16—C15—C20—C19 | 0.8 (3) |
| C6—C1—C10—C9 | 11.3 (2) | C13—C15—C20—C19 | 177.65 (16) |
| C2—C1—C10—C9 | −164.88 (16) | C15—C16—C17—C18 | 0.8 (3) |
| C9—O8—C7—O11 | −178.66 (18) | C1—C2—C3—C4 | −1.7 (3) |
| C9—O8—C7—C6 | 3.6 (3) | C5—C4—C3—C2 | −3.1 (3) |
| C5—C6—C7—O11 | −3.0 (3) | C16—C17—C18—C19 | 0.3 (3) |
| C1—C6—C7—O11 | −179.20 (19) | C16—C17—C18—Cl21 | 178.84 (15) |
| C5—C6—C7—O8 | 174.43 (15) | C20—C19—C18—C17 | −0.9 (3) |
| C1—C6—C7—O8 | −1.8 (2) | C20—C19—C18—Cl21 | −179.41 (14) |
| C9—C10—C13—O14 | 11.1 (3) | C7—O8—C9—O12 | −179.24 (16) |
| C1—C10—C13—O14 | −168.40 (16) | C7—O8—C9—C10 | 2.3 (3) |
| C9—C10—C13—C15 | −166.14 (16) | C13—C10—C9—O12 | −7.6 (3) |
| C1—C10—C13—C15 | 14.3 (3) | C1—C10—C9—O12 | 172.00 (17) |
| C1—C6—C5—C4 | 0.7 (3) | C13—C10—C9—O8 | 170.70 (16) |
| C7—C6—C5—C4 | −175.45 (18) | C1—C10—C9—O8 | −9.7 (2) |
| C6—C5—C4—C3 | 3.6 (3) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O14—H14···O12 | 0.82 | 1.76 | 2.492 (2) | 148 |
| C3—H3···O11i | 0.93 | 2.56 | 3.288 (2) | 136 |
Symmetry codes: (i) x, −y−1/2, z+1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: TK5016).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681104829X/tk5016sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681104829X/tk5016Isup2.hkl
Supplementary material file. DOI: 10.1107/S160053681104829X/tk5016Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report



