Skip to main content
Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Nov 19;67(Pt 12):o3359. doi: 10.1107/S1600536811048525

3-(3-Fluoro­phenyl­sulfon­yl)-2,5,7-trimethyl-1-benzofuran

Pil Ja Seo a, Hong Dae Choi a, Byeng Wha Son b, Uk Lee b,*
PMCID: PMC3239004  PMID: 22199853

Abstract

In the title compound, C17H15FO3S, the 3-fluoro­phenyl ring makes a dihedral angle of 73.39 (4)° with the mean plane of the benzofuran fragment. In the crystal, mol­ecules are linked by weak inter­molecular C—H⋯O hydrogen bonds. The crystal structure also exhibits a slipped π–π inter­action between the furan and benzene rings of neighboring mol­ecules [centroid–centroid distance = 3.743 (2) Å, inter­planar distance = 3.543 (2) Å and slippage = 1.207 (2) Å].

Related literature

For the pharmacological activity of benzofuran compounds, see: Aslam et al. (2009); Galal et al. (2009); Khan et al. (2005). For natural products with benzofuran rings, see: Akgul & Anil (2003); Soekamto et al. (2003). For the crystal structures of related compounds, see: Choi et al. (2010, 2011).graphic file with name e-67-o3359-scheme1.jpg

Experimental

Crystal data

  • C17H15FO3S

  • M r = 318.35

  • Triclinic, Inline graphic

  • a = 7.3603 (1) Å

  • b = 10.3121 (2) Å

  • c = 11.0590 (2) Å

  • α = 111.753 (1)°

  • β = 92.864 (1)°

  • γ = 101.623 (1)°

  • V = 756.42 (2) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.23 mm−1

  • T = 173 K

  • 0.21 × 0.20 × 0.18 mm

Data collection

  • Bruker SMART APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2009) T min = 0.953, T max = 0.959

  • 13459 measured reflections

  • 3468 independent reflections

  • 3111 reflections with I > 2σ(I)

  • R int = 0.024

Refinement

  • R[F 2 > 2σ(F 2)] = 0.036

  • wR(F 2) = 0.096

  • S = 1.04

  • 3468 reflections

  • 202 parameters

  • H-atom parameters constrained

  • Δρmax = 0.30 e Å−3

  • Δρmin = −0.42 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811048525/tk5019sup1.cif

e-67-o3359-sup1.cif (24.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811048525/tk5019Isup2.hkl

e-67-o3359-Isup2.hkl (170KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811048525/tk5019Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C3—H3⋯O2i 0.95 2.60 3.4890 (18) 156
C13—H13⋯O2i 0.95 2.51 3.4482 (18) 170
C17—H17⋯O3ii 0.95 2.41 3.3432 (18) 168

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

supplementary crystallographic information

Comment

Recently, substituted benzofuran derivatives have drawn much attention due to their valuable pharmacological properties such as antibacterial and antifungal, antitumor and antiviral, and antimicrobial activities (Aslam et al., 2009, Galal et al., 2009, Khan et al., 2005). These benzofuran derivatives occur in a wide range of natural products (Akgul & Anil, 2003; Soekamto et al., 2003). As a part of our ongoing study of benzofuran derivatives containing either 3-(4-fluorophenylsulfonyl) (Choi et al., 2010) or 3-(3-fluorophenylsulfinyl) (Choi et al., 2011) substituents, we report herein the crystal structure of the title compound.

In the title molecule (Fig. 1), the benzofuran unit is essentially planar, with a mean deviation of 0.012 (1) Å from the least-squares plane defined by the nine constituent atoms. The dihedral angle formed by the 3-fluorobenzene ring and the mean plane of the benzofuran fragment is 73.39 (4)°. The crystal packing (Fig. 2) is stabilized by weak intermolecular C—H···O hydrogen bonds (Table 1) and further stabilized by a weak slipped π–π interaction between the furan and benzene rings of adjacent molecules, with a Cg1···Cg2iii distance of 3.743 (2) Å and an interplanar distance of 3.543 (2) Å resulting in a slippage of 1.207 (2) Å (Cg1 and Cg2 are the centroids of the C1/C2/C7/O1/C8 furan ring and the C2-C7 benzene ring, respectively; iii: -x+1, -y+1, -z).

Experimental

77% 3-Chloroperoxybenzoic acid (448 mg, 2.0 mmol) was added in small portions to a stirred solution of 3-(3-fluorophenylsulfanyl)-2,5,7-trimethyl-1-benzofuran (257 mg, 0.9 mmol) in dichloromethane (30 mL) at 273 K. After being stirred at room temperature for 6 h, the mixture was washed with saturated sodium bicarbonate solution and the organic layer was separated, dried over magnesium sulfate, filtered and concentrated at reduced pressure. The residue was purified by column chromatography (hexane–ethyl acetate, 4:1 v/v) to afford the title compound as a colorless solid [yield 73%, M.pt. 403–404 K; Rf = 0.51 (hexane–ethyl acetate, 4:1 v/v)]. Single crystals suitable for X-ray diffraction were prepared by slow evaporation of a solution of the title compound in diisopropyl ether at room temperature.

Refinement

All H atoms were positioned geometrically and refined using a riding model, with C—H = 0.95 Å for aryl and 0.98 Å for methyl H atoms. Uiso(H) =1.2Ueq(C) aryl and 1.5Ueq(C) for methyl H atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with the atom numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are presented as small spheres of arbitrary radius.

Fig. 2.

Fig. 2.

A view of the C—H···O and π–π interactions (dotted lines) in the crystal structure of the title compound. H atoms non-participating in hydrogen-bonding were omitted for clarity. [Symmetry codes: (i) - x + 1, - y + 1, - z + 1; (ii) - x + 1, - y + 1, - z; (iii) - x + 1, - y + 2, - z + 1]

Crystal data

C17H15FO3S Z = 2
Mr = 318.35 F(000) = 332
Triclinic, P1 Dx = 1.398 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 7.3603 (1) Å Cell parameters from 7569 reflections
b = 10.3121 (2) Å θ = 2.9–27.5°
c = 11.0590 (2) Å µ = 0.23 mm1
α = 111.753 (1)° T = 173 K
β = 92.864 (1)° Block, colourless
γ = 101.623 (1)° 0.21 × 0.20 × 0.18 mm
V = 756.42 (2) Å3

Data collection

Bruker SMART APEXII CCD diffractometer 3468 independent reflections
Radiation source: rotating anode 3111 reflections with I > 2σ(I)
graphite multilayer Rint = 0.024
Detector resolution: 10.0 pixels mm-1 θmax = 27.6°, θmin = 2.0°
φ and ω scans h = −9→9
Absorption correction: multi-scan (SADABS; Bruker, 2009) k = −13→13
Tmin = 0.953, Tmax = 0.959 l = −14→14
13459 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036 Hydrogen site location: difference Fourier map
wR(F2) = 0.096 H-atom parameters constrained
S = 1.04 w = 1/[σ2(Fo2) + (0.0484P)2 + 0.3468P] where P = (Fo2 + 2Fc2)/3
3468 reflections (Δ/σ)max < 0.001
202 parameters Δρmax = 0.30 e Å3
0 restraints Δρmin = −0.42 e Å3

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
S1 0.51024 (4) 0.55990 (3) 0.27097 (3) 0.02048 (10)
F1 0.98547 (15) 0.34469 (13) −0.00478 (10) 0.0483 (3)
O1 0.73981 (14) 0.96817 (11) 0.36726 (10) 0.0264 (2)
O2 0.41075 (14) 0.52113 (11) 0.36588 (10) 0.0255 (2)
O3 0.41181 (15) 0.52758 (12) 0.14377 (10) 0.0286 (2)
C1 0.61238 (19) 0.74265 (14) 0.34366 (13) 0.0212 (3)
C2 0.65279 (19) 0.82907 (14) 0.48360 (13) 0.0215 (3)
C3 0.6301 (2) 0.80574 (16) 0.59909 (14) 0.0256 (3)
H3 0.5802 0.7121 0.5963 0.031*
C4 0.6823 (2) 0.92315 (17) 0.71796 (15) 0.0307 (3)
C5 0.7596 (2) 1.06062 (17) 0.72026 (15) 0.0314 (3)
H5 0.7951 1.1389 0.8031 0.038*
C6 0.7865 (2) 1.08763 (15) 0.60761 (16) 0.0277 (3)
C7 0.72972 (19) 0.96719 (15) 0.49131 (14) 0.0237 (3)
C8 0.6676 (2) 0.83088 (15) 0.27950 (14) 0.0246 (3)
C9 0.6531 (3) 0.9053 (2) 0.84564 (17) 0.0472 (5)
H9A 0.5433 0.9401 0.8779 0.071*
H9B 0.7640 0.9607 0.9109 0.071*
H9C 0.6332 0.8034 0.8310 0.071*
C10 0.8689 (2) 1.23324 (16) 0.60873 (18) 0.0362 (4)
H10A 0.9853 1.2318 0.5695 0.054*
H10B 0.8955 1.3042 0.6995 0.054*
H10C 0.7798 1.2590 0.5579 0.054*
C11 0.6663 (3) 0.80980 (19) 0.13943 (16) 0.0353 (4)
H11A 0.6324 0.7067 0.0844 0.053*
H11B 0.7910 0.8525 0.1257 0.053*
H11C 0.5747 0.8562 0.1156 0.053*
C12 0.69861 (19) 0.47456 (14) 0.24581 (13) 0.0212 (3)
C13 0.7727 (2) 0.44175 (16) 0.34553 (15) 0.0279 (3)
H13 0.7234 0.4647 0.4267 0.033*
C14 0.9203 (2) 0.37478 (19) 0.32442 (18) 0.0364 (4)
H14 0.9728 0.3513 0.3916 0.044*
C15 0.9921 (2) 0.34180 (18) 0.20595 (18) 0.0371 (4)
H15 1.0931 0.2956 0.1912 0.045*
C16 0.9148 (2) 0.37706 (17) 0.11057 (15) 0.0323 (3)
C17 0.7679 (2) 0.44305 (16) 0.12597 (14) 0.0265 (3)
H17 0.7163 0.4660 0.0582 0.032*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.02052 (17) 0.02127 (17) 0.01861 (17) 0.00476 (12) 0.00231 (12) 0.00675 (13)
F1 0.0390 (6) 0.0602 (7) 0.0312 (5) 0.0154 (5) 0.0133 (4) −0.0012 (5)
O1 0.0280 (5) 0.0234 (5) 0.0305 (5) 0.0062 (4) 0.0071 (4) 0.0132 (4)
O2 0.0254 (5) 0.0253 (5) 0.0263 (5) 0.0054 (4) 0.0083 (4) 0.0105 (4)
O3 0.0276 (5) 0.0333 (6) 0.0225 (5) 0.0072 (4) −0.0016 (4) 0.0088 (4)
C1 0.0224 (6) 0.0212 (6) 0.0211 (6) 0.0070 (5) 0.0040 (5) 0.0082 (5)
C2 0.0199 (6) 0.0214 (6) 0.0233 (7) 0.0074 (5) 0.0030 (5) 0.0075 (5)
C3 0.0311 (7) 0.0235 (7) 0.0232 (7) 0.0088 (6) 0.0043 (6) 0.0089 (6)
C4 0.0373 (8) 0.0306 (8) 0.0239 (7) 0.0141 (6) 0.0031 (6) 0.0072 (6)
C5 0.0328 (8) 0.0263 (7) 0.0276 (7) 0.0100 (6) −0.0015 (6) 0.0011 (6)
C6 0.0216 (7) 0.0214 (7) 0.0355 (8) 0.0060 (5) 0.0012 (6) 0.0059 (6)
C7 0.0215 (7) 0.0234 (7) 0.0275 (7) 0.0074 (5) 0.0042 (5) 0.0101 (6)
C8 0.0249 (7) 0.0252 (7) 0.0265 (7) 0.0089 (6) 0.0054 (6) 0.0114 (6)
C9 0.0783 (14) 0.0416 (10) 0.0234 (8) 0.0234 (10) 0.0089 (8) 0.0094 (7)
C10 0.0287 (8) 0.0220 (7) 0.0509 (10) 0.0028 (6) 0.0031 (7) 0.0084 (7)
C11 0.0464 (10) 0.0374 (9) 0.0293 (8) 0.0127 (7) 0.0115 (7) 0.0190 (7)
C12 0.0200 (6) 0.0190 (6) 0.0210 (6) 0.0029 (5) 0.0022 (5) 0.0047 (5)
C13 0.0271 (7) 0.0314 (7) 0.0268 (7) 0.0066 (6) 0.0045 (6) 0.0133 (6)
C14 0.0308 (8) 0.0410 (9) 0.0430 (9) 0.0128 (7) 0.0014 (7) 0.0209 (8)
C15 0.0266 (8) 0.0329 (8) 0.0458 (10) 0.0119 (6) 0.0031 (7) 0.0061 (7)
C16 0.0261 (7) 0.0310 (8) 0.0265 (7) 0.0044 (6) 0.0055 (6) −0.0027 (6)
C17 0.0260 (7) 0.0278 (7) 0.0194 (6) 0.0039 (6) 0.0019 (5) 0.0038 (6)

Geometric parameters (Å, °)

S1—O2 1.4380 (10) C9—H9A 0.9800
S1—O3 1.4380 (10) C9—H9B 0.9800
S1—C1 1.7345 (14) C9—H9C 0.9800
S1—C12 1.7672 (14) C10—H10A 0.9800
F1—C16 1.3526 (18) C10—H10B 0.9800
O1—C8 1.3622 (18) C10—H10C 0.9800
O1—C7 1.3813 (17) C11—H11A 0.9800
C1—C8 1.3619 (19) C11—H11B 0.9800
C1—C2 1.4500 (19) C11—H11C 0.9800
C2—C7 1.3917 (19) C12—C13 1.385 (2)
C2—C3 1.3965 (19) C12—C17 1.3920 (19)
C3—C4 1.387 (2) C13—C14 1.386 (2)
C3—H3 0.9500 C13—H13 0.9500
C4—C5 1.407 (2) C14—C15 1.387 (2)
C4—C9 1.510 (2) C14—H14 0.9500
C5—C6 1.389 (2) C15—C16 1.370 (2)
C5—H5 0.9500 C15—H15 0.9500
C6—C7 1.387 (2) C16—C17 1.375 (2)
C6—C10 1.497 (2) C17—H17 0.9500
C8—C11 1.482 (2)
O2—S1—O3 119.31 (6) C4—C9—H9C 109.5
O2—S1—C1 107.39 (6) H9A—C9—H9C 109.5
O3—S1—C1 109.06 (7) H9B—C9—H9C 109.5
O2—S1—C12 107.29 (6) C6—C10—H10A 109.5
O3—S1—C12 107.42 (6) C6—C10—H10B 109.5
C1—S1—C12 105.55 (6) H10A—C10—H10B 109.5
C8—O1—C7 107.03 (11) C6—C10—H10C 109.5
C8—C1—C2 107.76 (12) H10A—C10—H10C 109.5
C8—C1—S1 126.11 (11) H10B—C10—H10C 109.5
C2—C1—S1 126.13 (10) C8—C11—H11A 109.5
C7—C2—C3 119.43 (13) C8—C11—H11B 109.5
C7—C2—C1 104.13 (12) H11A—C11—H11B 109.5
C3—C2—C1 136.43 (13) C8—C11—H11C 109.5
C4—C3—C2 118.13 (14) H11A—C11—H11C 109.5
C4—C3—H3 120.9 H11B—C11—H11C 109.5
C2—C3—H3 120.9 C13—C12—C17 122.22 (13)
C3—C4—C5 120.14 (14) C13—C12—S1 119.21 (11)
C3—C4—C9 120.40 (15) C17—C12—S1 118.57 (11)
C5—C4—C9 119.45 (14) C12—C13—C14 118.59 (14)
C6—C5—C4 123.35 (14) C12—C13—H13 120.7
C6—C5—H5 118.3 C14—C13—H13 120.7
C4—C5—H5 118.3 C13—C14—C15 120.51 (15)
C7—C6—C5 114.29 (14) C13—C14—H14 119.7
C7—C6—C10 121.84 (15) C15—C14—H14 119.7
C5—C6—C10 123.87 (14) C16—C15—C14 118.77 (15)
O1—C7—C6 124.66 (13) C16—C15—H15 120.6
O1—C7—C2 110.69 (12) C14—C15—H15 120.6
C6—C7—C2 124.65 (14) F1—C16—C15 118.52 (14)
C1—C8—O1 110.39 (12) F1—C16—C17 118.28 (15)
C1—C8—C11 134.46 (14) C15—C16—C17 123.20 (15)
O1—C8—C11 115.15 (13) C16—C17—C12 116.71 (14)
C4—C9—H9A 109.5 C16—C17—H17 121.6
C4—C9—H9B 109.5 C12—C17—H17 121.6
H9A—C9—H9B 109.5
O2—S1—C1—C8 −158.08 (13) C1—C2—C7—O1 −0.78 (15)
O3—S1—C1—C8 −27.46 (15) C3—C2—C7—C6 −0.4 (2)
C12—S1—C1—C8 87.68 (14) C1—C2—C7—C6 178.54 (14)
O2—S1—C1—C2 21.36 (14) C2—C1—C8—O1 −0.35 (16)
O3—S1—C1—C2 151.98 (12) S1—C1—C8—O1 179.17 (10)
C12—S1—C1—C2 −92.88 (13) C2—C1—C8—C11 179.45 (16)
C8—C1—C2—C7 0.68 (15) S1—C1—C8—C11 −1.0 (3)
S1—C1—C2—C7 −178.84 (10) C7—O1—C8—C1 −0.13 (16)
C8—C1—C2—C3 179.38 (16) C7—O1—C8—C11 −179.98 (12)
S1—C1—C2—C3 −0.1 (2) O2—S1—C12—C13 −26.71 (13)
C7—C2—C3—C4 1.3 (2) O3—S1—C12—C13 −156.14 (11)
C1—C2—C3—C4 −177.26 (15) C1—S1—C12—C13 87.59 (12)
C2—C3—C4—C5 −1.3 (2) O2—S1—C12—C17 153.52 (11)
C2—C3—C4—C9 177.35 (15) O3—S1—C12—C17 24.09 (13)
C3—C4—C5—C6 0.5 (2) C1—S1—C12—C17 −92.18 (12)
C9—C4—C5—C6 −178.17 (16) C17—C12—C13—C14 −0.3 (2)
C4—C5—C6—C7 0.3 (2) S1—C12—C13—C14 179.97 (12)
C4—C5—C6—C10 −179.86 (15) C12—C13—C14—C15 0.1 (2)
C8—O1—C7—C6 −178.73 (14) C13—C14—C15—C16 0.2 (3)
C8—O1—C7—C2 0.60 (15) C14—C15—C16—F1 179.97 (15)
C5—C6—C7—O1 178.85 (13) C14—C15—C16—C17 −0.4 (3)
C10—C6—C7—O1 −1.0 (2) F1—C16—C17—C12 179.90 (13)
C5—C6—C7—C2 −0.4 (2) C15—C16—C17—C12 0.3 (2)
C10—C6—C7—C2 179.80 (13) C13—C12—C17—C16 0.0 (2)
C3—C2—C7—O1 −179.75 (12) S1—C12—C17—C16 179.81 (11)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C3—H3···O2i 0.95 2.60 3.4890 (18) 156
C13—H13···O2i 0.95 2.51 3.4482 (18) 170
C17—H17···O3ii 0.95 2.41 3.3432 (18) 168

Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1, −y+1, −z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: TK5019).

References

  1. Akgul, Y. Y. & Anil, H. (2003). Phytochemistry, 63, 939–943. [DOI] [PubMed]
  2. Aslam, S. N., Stevenson, P. C., Kokubun, T. & Hall, D. R. (2009). Microbiol. Res. 164, 191–195. [DOI] [PubMed]
  3. Brandenburg, K. (1998). DIAMOND Crystal Impact GbR, Bonn, Germany.
  4. Bruker (2009). APEX2, SADABS and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  5. Choi, H. D., Seo, P. J., Son, B. W. & Lee, U. (2010). Acta Cryst. E66, o1813. [DOI] [PMC free article] [PubMed]
  6. Choi, H. D., Seo, P. J., Son, B. W. & Lee, U. (2011). Acta Cryst. E67, o1468. [DOI] [PMC free article] [PubMed]
  7. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  8. Galal, S. A., Abd El-All, A. S., Abdallah, M. M. & El-Diwani, H. I. (2009). Bioorg. Med. Chem. Lett 19, 2420–2428. [DOI] [PubMed]
  9. Khan, M. W., Alam, M. J., Rashid, M. A. & Chowdhury, R. (2005). Bioorg. Med. Chem 13, 4796–4805. [DOI] [PubMed]
  10. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  11. Soekamto, N. H., Achmad, S. A., Ghisalberti, E. L., Hakim, E. H. & Syah, Y. M. (2003). Phytochemistry, 64, 831–834. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811048525/tk5019sup1.cif

e-67-o3359-sup1.cif (24.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811048525/tk5019Isup2.hkl

e-67-o3359-Isup2.hkl (170KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811048525/tk5019Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

RESOURCES