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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Nov 19;67(Pt 12):o3370–o3371. doi: 10.1107/S1600536811048240

(E)-N′-(3-Hy­droxy-4-meth­oxy­benzyl­idene)-4-meth­oxy­benzohydrazide

Hoong-Kun Fun a,*,, Premrudee Promdet b, Suchada Chantrapromma b,§, Jirapa Horkaew b, Chatchanok Karalai b
PMCID: PMC3239014  PMID: 22199863

Abstract

The title mol­ecule, a benzohydrazide derivative, C16H16N2O4, is twisted with a dihedral angle of 69.97 (5)° between the two benzene rings. An intra­molecular O—H⋯O hydrogen bond generates an S(5) ring motif. In the crystal, mol­ecules are linked by N—H⋯O and weak C—H⋯O hydrogen bonds into a chain along the c axis. C—H⋯π inter­actions are also present.

Related literature

For bond-length data, see: Allen et al. (1987). For details of hydrogen-bond motifs, see: Bernstein et al. (1995). For related structures, see: Fun et al. (2011); Horkaew et al. (2011); Promdet et al. (2011). For background and applications of benzohydrazide derivatives, see: Bedia et al. (2006); Loncle et al. (2004); Melnyk et al. (2006); Raj et al. (2007). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).graphic file with name e-67-o3370-scheme1.jpg

Experimental

Crystal data

  • C16H16N2O4

  • M r = 300.31

  • Monoclinic, Inline graphic

  • a = 12.1323 (19) Å

  • b = 12.9727 (15) Å

  • c = 9.6714 (12) Å

  • β = 113.213 (2)°

  • V = 1398.9 (3) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.10 mm−1

  • T = 100 K

  • 0.58 × 0.30 × 0.07 mm

Data collection

  • Bruker APEX DUO CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2009) T min = 0.942, T max = 0.993

  • 14521 measured reflections

  • 3704 independent reflections

  • 3260 reflections with I > 2σ(I)

  • R int = 0.021

Refinement

  • R[F 2 > 2σ(F 2)] = 0.037

  • wR(F 2) = 0.109

  • S = 1.03

  • 3704 reflections

  • 208 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.39 e Å−3

  • Δρmin = −0.23 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811048240/is5009sup1.cif

e-67-o3370-sup1.cif (19.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811048240/is5009Isup2.hkl

e-67-o3370-Isup2.hkl (181.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811048240/is5009Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg1 is the centroid of the C1–C6 ring.

D—H⋯A D—H H⋯A DA D—H⋯A
O3—H1O3⋯O4 0.87 (2) 2.18 (2) 2.6692 (13) 115.9 (18)
N1—H1N1⋯O1i 0.887 (18) 1.992 (18) 2.8698 (13) 170.0 (16)
C8—H8A⋯O1i 0.93 2.47 3.2780 (15) 145
C15—H15CCg1ii 0.96 2.72 3.5664 (15) 148
C16—H16BCg1iii 0.96 2.76 3.4366 (16) 128

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Acknowledgments

PP thanks the Development and Promotion of Science and Technology Talents Project for a fellowship. JH thanks the Crystal Materials Research Unit, Prince of Songkla University, for financial support. The authors also thank the Prince of Songkla University and Universiti Sains Malaysia for the Research University Grant No. 1001/PFIZIK/811160.

supplementary crystallographic information

Comment

Benzohydrazide derivatives have been reported to possess various biological properties, such as antibacterial and antifungal (Loncle et al., 2004), antitubercular (Bedia et al., 2006), antimalarial (Melnyk et al., 2006) and antiproliferative (Raj et al., 2007) activities. We have previously reported some crystal structures of this type of compounds (Fun et al., 2011; Horkaew et al., 2011; Promdet et al., 2011). The title compound (I) was synthesized in order to study the effect of functional groups to their bioactivities comparing to the closely related structures. (I) was screened for antibacterial and antioxidant activities. Our results show that (I) exhibits moderate antibacterial activity whereas it is inactive for antioxidant activity. The three dimensional structure of (I) was studied in order to gain more details to explain the effect of structure on its bioactivity.

The molecule of the title benzohydrazide derivative (Fig. 1), C16H16N2O4, exists in a trans-configuration with respect to the C8═N2 bond [1.2808 (14) Å] and the torsion angle of N1–N2–C8–C9 is 179.20 (9)°. The molecule is twisted as indicated by the dihedral angle between the two benzene rings being 69.97 (5)°. The middle bridge fragment (O1/C7/N1/N2/C8) is nearly planar with a torsion angle N2–N1–C7–O1 = -0.80 (16)°. The mean plane through this bridge makes dihedral angles of 27.88 (7) and 43.44 (7)° with the C1–C6 and C9–C14 benzene rings, respectively. The methoxy group of 4-methoxyphenyl (at atom C4) is co-planar with its bound benzene ring [torsion angle C15–O2–C4–C5 = -0.76 (16)° and r.m.s 0.0131 (1) Å for the seven non H atoms], whereas the methoxy group of the 3-hydroxy-4-methoxyphenyl (at atom C12) is slight deviated with a torsion angle C16–O4–C12–C13 = 10.02 (15)°. An intramolecular O3—H1O3···O4 hydrogen bond generates an S(5) ring motif (Bernstein et al., 1995). Bond distances are of normal values (Allen et al., 1987) and are comparable with the related structures (Fun et al., 2011; Horkaew et al., 2011; Promdet et al., 2011).

In the crystal packing (Fig. 2), the molecules are linked by N—H···O hydrogen bonds and weak C—H···O interactions (Table 1) into chains along the c axis. These chains are arranged in a face-to-face manner. The crystal is stabilized by N—H···O hydrogen bonds, weak C—H···O and C—H···π interactions (Table 1).

Experimental

The title compound (I) was prepared by dissolving 4-methoxybenzohydrazide (2 mmol, 0.33 g) in ethanol (10 ml). The solution of 3-hydroxy-4-methoxybenzaldehyde (2 mmol, 0.30 g) in ethanol (10 ml) was then added slowly to the reaction. The mixture was refluxed for around 3 hr. The solution was then cooled to room temperature. Colorless plate-shaped single crystals of the title compound suitable for X-ray structure determination were recrystallized from methanol by slow evaporation of the solvent at room temperature after several days (m.p. 491-492 K).

Refinement

Amide and hydroxy H atoms were located in difference maps and refined isotropically [N—H = 0.887 (18) Å and O—H = 0.87 (2) Å]. The remaining H atoms were positioned geometrically and allowed to ride on their parent atoms, with C—H = 0.93 Å for aromatic and CH and 0.96 Å for CH3 atoms. The Uiso values were constrained to be 1.5Ueq of the carrier atom for methyl H atoms and 1.2Ueq for the remaining H atoms. A rotating group model was used for the methyl groups.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, showing 60% probability displacement ellipsoids and the atom-numbering scheme. Hydrogen bond was drawn as a dash line.

Fig. 2.

Fig. 2.

A crystal packing diagram of the title compound viewed along the b axis, showing chains running along the c axis. Hydrogen bonds were drawn as dashed lines.

Crystal data

C16H16N2O4 F(000) = 632
Mr = 300.31 Dx = 1.426 Mg m3
Monoclinic, P21/c Melting point = 491–492 K
Hall symbol: -P 2ybc Mo Kα radiation, λ = 0.71073 Å
a = 12.1323 (19) Å Cell parameters from 3704 reflections
b = 12.9727 (15) Å θ = 1.8–29.0°
c = 9.6714 (12) Å µ = 0.10 mm1
β = 113.213 (2)° T = 100 K
V = 1398.9 (3) Å3 Plate, colorless
Z = 4 0.58 × 0.30 × 0.07 mm

Data collection

Bruker APEX DUO CCD area-detector diffractometer 3704 independent reflections
Radiation source: sealed tube 3260 reflections with I > 2σ(I)
graphite Rint = 0.021
φ and ω scans θmax = 29.0°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2009) h = −15→16
Tmin = 0.942, Tmax = 0.993 k = −17→16
14521 measured reflections l = −13→13

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.109 H atoms treated by a mixture of independent and constrained refinement
S = 1.03 w = 1/[σ2(Fo2) + (0.058P)2 + 0.5751P] where P = (Fo2 + 2Fc2)/3
3704 reflections (Δ/σ)max = 0.001
208 parameters Δρmax = 0.39 e Å3
0 restraints Δρmin = −0.23 e Å3

Special details

Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.29470 (7) 0.79595 (6) 0.37018 (8) 0.01765 (17)
O2 0.47609 (8) 1.16425 (6) 0.09037 (9) 0.02033 (18)
O3 −0.02649 (8) 0.33066 (7) 0.26553 (10) 0.02208 (19)
H1O3 −0.0427 (18) 0.2655 (17) 0.262 (2) 0.049 (6)*
O4 0.05699 (8) 0.16672 (6) 0.17060 (10) 0.02052 (18)
N1 0.24563 (9) 0.72966 (7) 0.13517 (10) 0.01662 (19)
H1N1 0.2597 (15) 0.7299 (13) 0.0519 (19) 0.027 (4)*
N2 0.20136 (8) 0.63908 (7) 0.16926 (10) 0.01754 (19)
C1 0.33802 (9) 0.89609 (8) 0.19231 (11) 0.0143 (2)
C2 0.42433 (10) 0.95553 (8) 0.30308 (11) 0.0169 (2)
H2A 0.4511 0.9355 0.4033 0.020*
C3 0.47027 (10) 1.04352 (8) 0.26570 (11) 0.0175 (2)
H3A 0.5285 1.0818 0.3403 0.021*
C4 0.42906 (9) 1.07495 (8) 0.11550 (12) 0.0158 (2)
C5 0.34465 (9) 1.01566 (8) 0.00388 (11) 0.0162 (2)
H5A 0.3184 1.0355 −0.0964 0.019*
C6 0.29974 (9) 0.92674 (8) 0.04258 (11) 0.0155 (2)
H6A 0.2434 0.8872 −0.0323 0.019*
C7 0.29096 (9) 0.80337 (8) 0.24151 (11) 0.0143 (2)
C8 0.20399 (10) 0.56293 (9) 0.08631 (12) 0.0174 (2)
H8A 0.2331 0.5735 0.0117 0.021*
C9 0.16289 (9) 0.46024 (8) 0.10510 (11) 0.0167 (2)
C10 0.08516 (9) 0.44367 (8) 0.17847 (11) 0.0170 (2)
H10A 0.0565 0.4994 0.2150 0.020*
C11 0.05118 (9) 0.34488 (8) 0.19644 (12) 0.0168 (2)
C12 0.09594 (9) 0.26028 (8) 0.14405 (12) 0.0167 (2)
C13 0.17260 (10) 0.27633 (9) 0.07125 (12) 0.0192 (2)
H13A 0.2022 0.2205 0.0362 0.023*
C14 0.20503 (10) 0.37620 (9) 0.05082 (12) 0.0192 (2)
H14A 0.2554 0.3869 0.0004 0.023*
C15 0.43662 (11) 1.19826 (9) −0.06160 (13) 0.0221 (2)
H15A 0.4779 1.2606 −0.0655 0.033*
H15B 0.3518 1.2110 −0.1008 0.033*
H15C 0.4535 1.1461 −0.1208 0.033*
C16 0.11532 (11) 0.07892 (9) 0.14054 (14) 0.0228 (2)
H16A 0.0817 0.0171 0.1624 0.034*
H16B 0.1995 0.0817 0.2025 0.034*
H16C 0.1039 0.0790 0.0365 0.034*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0231 (4) 0.0179 (4) 0.0150 (3) 0.0017 (3) 0.0108 (3) 0.0010 (3)
O2 0.0243 (4) 0.0178 (4) 0.0183 (4) −0.0057 (3) 0.0077 (3) 0.0011 (3)
O3 0.0220 (4) 0.0190 (4) 0.0318 (4) −0.0008 (3) 0.0175 (3) 0.0007 (3)
O4 0.0227 (4) 0.0151 (4) 0.0284 (4) −0.0019 (3) 0.0150 (3) 0.0001 (3)
N1 0.0227 (4) 0.0154 (4) 0.0144 (4) −0.0033 (3) 0.0100 (3) −0.0004 (3)
N2 0.0195 (4) 0.0164 (4) 0.0166 (4) −0.0041 (3) 0.0070 (3) 0.0013 (3)
C1 0.0175 (5) 0.0137 (4) 0.0136 (4) 0.0006 (4) 0.0082 (4) −0.0006 (3)
C2 0.0209 (5) 0.0175 (5) 0.0125 (4) 0.0000 (4) 0.0066 (4) −0.0009 (4)
C3 0.0197 (5) 0.0172 (5) 0.0147 (4) −0.0028 (4) 0.0058 (4) −0.0029 (4)
C4 0.0172 (5) 0.0145 (5) 0.0176 (5) −0.0006 (4) 0.0088 (4) 0.0002 (4)
C5 0.0183 (5) 0.0170 (5) 0.0130 (4) −0.0004 (4) 0.0059 (4) 0.0011 (4)
C6 0.0168 (5) 0.0159 (5) 0.0131 (4) −0.0014 (4) 0.0053 (4) −0.0014 (3)
C7 0.0144 (4) 0.0150 (5) 0.0148 (4) 0.0015 (4) 0.0071 (4) 0.0006 (3)
C8 0.0190 (5) 0.0183 (5) 0.0149 (4) −0.0017 (4) 0.0067 (4) 0.0015 (4)
C9 0.0174 (5) 0.0171 (5) 0.0134 (4) −0.0021 (4) 0.0037 (4) 0.0007 (4)
C10 0.0160 (5) 0.0170 (5) 0.0170 (4) 0.0008 (4) 0.0055 (4) 0.0001 (4)
C11 0.0138 (4) 0.0193 (5) 0.0168 (4) −0.0004 (4) 0.0057 (4) 0.0007 (4)
C12 0.0164 (5) 0.0155 (5) 0.0176 (4) −0.0020 (4) 0.0060 (4) 0.0003 (4)
C13 0.0220 (5) 0.0177 (5) 0.0203 (5) −0.0009 (4) 0.0109 (4) −0.0020 (4)
C14 0.0229 (5) 0.0196 (5) 0.0186 (5) −0.0038 (4) 0.0117 (4) −0.0009 (4)
C15 0.0252 (5) 0.0206 (5) 0.0209 (5) −0.0015 (4) 0.0096 (4) 0.0056 (4)
C16 0.0274 (6) 0.0153 (5) 0.0298 (6) −0.0013 (4) 0.0158 (5) −0.0019 (4)

Geometric parameters (Å, °)

O1—C7 1.2310 (13) C5—H5A 0.9300
O2—C4 1.3550 (12) C6—H6A 0.9300
O2—C15 1.4246 (13) C8—C9 1.4588 (15)
O3—C11 1.3656 (13) C8—H8A 0.9300
O3—H1O3 0.87 (2) C9—C14 1.3918 (15)
O4—C12 1.3631 (13) C9—C10 1.4024 (15)
O4—C16 1.4300 (14) C10—C11 1.3779 (15)
N1—C7 1.3523 (13) C10—H10A 0.9300
N1—N2 1.3847 (12) C11—C12 1.4046 (15)
N1—H1N1 0.887 (17) C12—C13 1.3858 (15)
N2—C8 1.2808 (14) C13—C14 1.3906 (15)
C1—C6 1.3930 (14) C13—H13A 0.9300
C1—C2 1.3980 (14) C14—H14A 0.9300
C1—C7 1.4877 (14) C15—H15A 0.9600
C2—C3 1.3796 (15) C15—H15B 0.9600
C2—H2A 0.9300 C15—H15C 0.9600
C3—C4 1.3978 (14) C16—H16A 0.9600
C3—H3A 0.9300 C16—H16B 0.9600
C4—C5 1.3907 (14) C16—H16C 0.9600
C5—C6 1.3888 (14)
C4—O2—C15 117.11 (9) C14—C9—C10 119.41 (10)
C11—O3—H1O3 107.6 (13) C14—C9—C8 118.29 (10)
C12—O4—C16 115.78 (9) C10—C9—C8 122.28 (10)
C7—N1—N2 119.91 (9) C11—C10—C9 120.04 (10)
C7—N1—H1N1 121.5 (11) C11—C10—H10A 120.0
N2—N1—H1N1 116.8 (11) C9—C10—H10A 120.0
C8—N2—N1 113.42 (9) O3—C11—C10 119.06 (10)
C6—C1—C2 118.77 (10) O3—C11—C12 120.68 (10)
C6—C1—C7 123.40 (9) C10—C11—C12 120.25 (10)
C2—C1—C7 117.83 (9) O4—C12—C13 125.55 (10)
C3—C2—C1 120.90 (9) O4—C12—C11 114.57 (9)
C3—C2—H2A 119.6 C13—C12—C11 119.88 (10)
C1—C2—H2A 119.6 C12—C13—C14 119.76 (10)
C2—C3—C4 119.85 (9) C12—C13—H13A 120.1
C2—C3—H3A 120.1 C14—C13—H13A 120.1
C4—C3—H3A 120.1 C13—C14—C9 120.64 (10)
O2—C4—C5 124.53 (9) C13—C14—H14A 119.7
O2—C4—C3 115.62 (9) C9—C14—H14A 119.7
C5—C4—C3 119.85 (10) O2—C15—H15A 109.5
C6—C5—C4 119.82 (9) O2—C15—H15B 109.5
C6—C5—H5A 120.1 H15A—C15—H15B 109.5
C4—C5—H5A 120.1 O2—C15—H15C 109.5
C5—C6—C1 120.78 (9) H15A—C15—H15C 109.5
C5—C6—H6A 119.6 H15B—C15—H15C 109.5
C1—C6—H6A 119.6 O4—C16—H16A 109.5
O1—C7—N1 123.74 (10) O4—C16—H16B 109.5
O1—C7—C1 121.37 (9) H16A—C16—H16B 109.5
N1—C7—C1 114.89 (9) O4—C16—H16C 109.5
N2—C8—C9 122.15 (10) H16A—C16—H16C 109.5
N2—C8—H8A 118.9 H16B—C16—H16C 109.5
C9—C8—H8A 118.9
C7—N1—N2—C8 −154.92 (10) N1—N2—C8—C9 179.20 (9)
C6—C1—C2—C3 0.60 (16) N2—C8—C9—C14 −158.09 (11)
C7—C1—C2—C3 −178.84 (10) N2—C8—C9—C10 20.44 (16)
C1—C2—C3—C4 0.97 (17) C14—C9—C10—C11 0.05 (15)
C15—O2—C4—C5 −0.76 (16) C8—C9—C10—C11 −178.47 (9)
C15—O2—C4—C3 179.62 (10) C9—C10—C11—O3 −178.69 (9)
C2—C3—C4—O2 177.65 (10) C9—C10—C11—C12 1.23 (15)
C2—C3—C4—C5 −2.00 (16) C16—O4—C12—C13 10.02 (15)
O2—C4—C5—C6 −178.16 (10) C16—O4—C12—C11 −170.42 (9)
C3—C4—C5—C6 1.45 (16) O3—C11—C12—O4 −1.02 (14)
C4—C5—C6—C1 0.14 (16) C10—C11—C12—O4 179.07 (9)
C2—C1—C6—C5 −1.16 (16) O3—C11—C12—C13 178.58 (10)
C7—C1—C6—C5 178.25 (10) C10—C11—C12—C13 −1.34 (16)
N2—N1—C7—O1 −0.80 (16) O4—C12—C13—C14 179.72 (10)
N2—N1—C7—C1 178.78 (9) C11—C12—C13—C14 0.17 (16)
C6—C1—C7—O1 −155.95 (10) C12—C13—C14—C9 1.11 (16)
C2—C1—C7—O1 23.46 (15) C10—C9—C14—C13 −1.22 (16)
C6—C1—C7—N1 24.46 (14) C8—C9—C14—C13 177.35 (10)
C2—C1—C7—N1 −156.13 (10)

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C1–C6 ring.
D—H···A D—H H···A D···A D—H···A
O3—H1O3···O4 0.87 (2) 2.18 (2) 2.6692 (13) 115.9 (18)
N1—H1N1···O1i 0.887 (18) 1.992 (18) 2.8698 (13) 170.0 (16)
C8—H8A···O1i 0.93 2.47 3.2780 (15) 145
C15—H15C···Cg1ii 0.96 2.72 3.5664 (15) 148
C16—H16B···Cg1iii 0.96 2.76 3.4366 (16) 128

Symmetry codes: (i) x, −y+3/2, z−1/2; (ii) −x+1, −y+2, −z; (iii) x, y−1, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: IS5009).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811048240/is5009sup1.cif

e-67-o3370-sup1.cif (19.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811048240/is5009Isup2.hkl

e-67-o3370-Isup2.hkl (181.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811048240/is5009Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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