Abstract
In the title 1:1 adduct, C6H6N2O·C11H8O2, the amide group is slightly twisted out of the plane of the aromatic ring, with a C—C—C—N torsion angle of 25.11 (19)°, whereas the carboxylic acid group is approximately coplanar with the bicylic ring system, with a C—C—C—O torsion angle of 10.9 (2)°. The amide groups from two isonicotinamide molecules form a dimer via N—H⋯O hydrogen bonds. In addition, the 2-naphthanoic acid molecule is hydrogen bonded to the pyridine unit of an isonicotinamide molecule via an O—H⋯N hydrogen bond. This gives rise to a centrosymmetric four-molecule chain, which is cross-linked by further N—H⋯O hydrogen bonds from the amide group.
Related literature
For related compounds, see: Lemmerer et al. (2008 ▶); Aakeröy et al. (2002 ▶); Báthori et al. (2010 ▶). The carboxylic acid–pyridine hydrogen bond is an often used supramolecular synthon, see: Aakeröy & Beatty (2001 ▶).
Experimental
Crystal data
C6H6N2O·C11H8O2
M r = 294.3
Monoclinic,
a = 8.6665 (17) Å
b = 23.752 (5) Å
c = 7.3793 (15) Å
β = 110.33 (3)°
V = 1424.4 (5) Å3
Z = 4
Mo Kα radiation
μ = 0.10 mm−1
T = 173 K
0.48 × 0.45 × 0.08 mm
Data collection
Bruker APEXII CCD area-detector diffractometer
Absorption correction: integration (XPREP; Bruker, 2007 ▶) T min = 0.956, T max = 0.993
7507 measured reflections
2605 independent reflections
2130 reflections with I > 2σ(I)
R int = 0.055
Refinement
R[F 2 > 2σ(F 2)] = 0.041
wR(F 2) = 0.119
S = 1.01
2605 reflections
211 parameters
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.21 e Å−3
Δρmin = −0.20 e Å−3
Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT-Plus (Bruker, 2007 ▶); data reduction: SAINT-Plus and XPREP (Bruker, 2007 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1999 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON (Spek, 2009 ▶).
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811050057/fj2462sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811050057/fj2462Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811050057/fj2462Isup3.mol
Supplementary material file. DOI: 10.1107/S1600536811050057/fj2462Isup4.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N1—H1S⋯O1i | 0.904 (19) | 2.012 (19) | 2.914 (2) | 176 (2) |
| N1—H1A⋯O3ii | 0.862 (18) | 2.123 (18) | 2.9755 (17) | 170 (2) |
| O2—H2⋯N2 | 1.05 (3) | 1.56 (3) | 2.5999 (18) | 170 (2) |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
This work was supported by the University of the Witwatersrand, which is thanked for providing the infrastructure required to do this work.
supplementary crystallographic information
Comment
This co-crystal is part of a larger crystal engineering project involving carboxylic acids and the anti-tuberculosis agent isoniazid. In this project, the pyridine N atom of either nicotinamide, isonicotinamide or isoniazid acts as a hydrogen bond acceptor for carboxylic acid group protons. The carboxylic acid-pyridine hydrogen bond is an often used supramolecular synthon (Aakeröy et al., 2001; Aakeröy et al., 2002; Lemmerer et al., 2008). The co-crystal former ability of isonicotinamide and nicotinamide was investigated by performing density functional theory calculations in a related study (Báthori et al., 2010).
The asymmetric unit of (I) consists of one molecule of isonicotinamide and one molecule of 2-naphthanoic acid, sitting on general positions (Fig. 1). The asymmetric unit is connected by a O—H···N hydrogen bond. The combination of O—H···N and N—H···O hydrogen bonds gives rise to centrosymmetric 4-molecule chains, which are cross-linked by the N—H···O hydrogen bonds (Fig. 2).
Experimental
The compound was prepared by dissolving equimolar amounts of isonicotinamide (0.218 g) and 2-naphthanoic acid (0.308 g) in distilled methanol (15 ml). The mixture was stirred at room temperature under a standard atmosphere for 24 h. Colourless crystals were grown by slow evaporation at ambient conditions from the methanol solvent over a few days.
Refinement
The C-bound H atoms were geometrically placed (aromatic C—H bond lengths of 0.95 Å), and refined as riding with Uiso(H) = 1.2Ueq(C). The N-bound and O-bound H atoms were located in the difference Fourier map and coordinates refined freely as well as their isotropic displacement parameters.
Figures
Fig. 1.
The asymmetric unit of the co-crystal showing the atomic numbering scheme. Displacement ellipsoids are shown at the 50% probability level.
Fig. 2.
Hydrogen bonding diagram of the co-crystal. Intermolecular N—H···O and O—H···O hydrogen bonds are shown as dashed red lines forming centrosymmetric 4-molecule chains.
Crystal data
| C6H6N2O·C11H8O2 | F(000) = 616 |
| Mr = 294.3 | Dx = 1.372 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 5555 reflections |
| a = 8.6665 (17) Å | θ = 1–27.5° |
| b = 23.752 (5) Å | µ = 0.10 mm−1 |
| c = 7.3793 (15) Å | T = 173 K |
| β = 110.33 (3)° | Block, colourless |
| V = 1424.4 (5) Å3 | 0.48 × 0.45 × 0.08 mm |
| Z = 4 |
Data collection
| Bruker APEXII CCD area-detector diffractometer | 2130 reflections with I > 2σ(I) |
| ω scans | Rint = 0.055 |
| Absorption correction: integration (XPREP; Bruker, 2007) | θmax = 25.5°, θmin = 3.0° |
| Tmin = 0.956, Tmax = 0.993 | h = −10→10 |
| 7507 measured reflections | k = −28→27 |
| 2605 independent reflections | l = −8→7 |
Refinement
| Refinement on F2 | 0 restraints |
| Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
| R[F2 > 2σ(F2)] = 0.041 | w = 1/[σ2(Fo2) + (0.0731P)2 + 0.1531P] where P = (Fo2 + 2Fc2)/3 |
| wR(F2) = 0.119 | (Δ/σ)max < 0.001 |
| S = 1.01 | Δρmax = 0.21 e Å−3 |
| 2605 reflections | Δρmin = −0.20 e Å−3 |
| 211 parameters |
Special details
| Experimental. Numerical integration absorption corrections based on indexed crystal faces were applied using the XPREP routine (Bruker, 2004) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | 1.10423 (17) | 0.44738 (6) | 0.71685 (18) | 0.0248 (3) | |
| C2 | 1.08405 (18) | 0.40155 (6) | 0.59333 (19) | 0.0281 (3) | |
| H2A | 1.1769 | 0.3829 | 0.5809 | 0.034* | |
| C3 | 0.92709 (18) | 0.38371 (7) | 0.48958 (19) | 0.0325 (4) | |
| H3 | 0.9143 | 0.3518 | 0.4079 | 0.039* | |
| C4 | 0.81087 (18) | 0.45238 (7) | 0.6185 (2) | 0.0329 (4) | |
| H4 | 0.7157 | 0.4703 | 0.627 | 0.039* | |
| C5 | 0.96357 (17) | 0.47215 (6) | 0.7311 (2) | 0.0292 (3) | |
| H5 | 0.9727 | 0.5025 | 0.8179 | 0.035* | |
| C6 | 1.26979 (17) | 0.47009 (6) | 0.83740 (19) | 0.0271 (3) | |
| N1 | 1.39399 (17) | 0.46082 (6) | 0.77495 (19) | 0.0324 (3) | |
| H1S | 1.496 (2) | 0.4727 (7) | 0.846 (2) | 0.036 (4)* | |
| H1A | 1.375 (2) | 0.4460 (8) | 0.663 (3) | 0.042 (5)* | |
| N2 | 0.79178 (15) | 0.40878 (6) | 0.49762 (16) | 0.0335 (3) | |
| O1 | 1.28451 (13) | 0.49617 (5) | 0.98726 (14) | 0.0371 (3) | |
| C7 | 0.23811 (17) | 0.35294 (6) | 0.12753 (18) | 0.0257 (3) | |
| C8 | 0.25613 (18) | 0.30807 (6) | 0.00900 (19) | 0.0301 (3) | |
| H8 | 0.363 | 0.2962 | 0.0172 | 0.036* | |
| C9 | 0.12123 (18) | 0.28196 (6) | −0.11624 (19) | 0.0313 (4) | |
| H9 | 0.1354 | 0.2517 | −0.1931 | 0.038* | |
| C10 | −0.03974 (17) | 0.29913 (6) | −0.13394 (19) | 0.0267 (3) | |
| C11 | −0.18280 (19) | 0.27324 (7) | −0.2630 (2) | 0.0350 (4) | |
| H11 | −0.1722 | 0.2426 | −0.3407 | 0.042* | |
| C12 | −0.33562 (19) | 0.29162 (7) | −0.2774 (2) | 0.0382 (4) | |
| H12 | −0.4301 | 0.2737 | −0.3652 | 0.046* | |
| C13 | −0.35493 (19) | 0.33669 (7) | −0.1639 (2) | 0.0355 (4) | |
| H13 | −0.4621 | 0.3489 | −0.1745 | 0.043* | |
| C14 | −0.21997 (17) | 0.36309 (6) | −0.0382 (2) | 0.0289 (3) | |
| H14 | −0.2341 | 0.3938 | 0.0371 | 0.035* | |
| C15 | −0.05903 (16) | 0.34512 (6) | −0.01926 (18) | 0.0243 (3) | |
| C16 | 0.08343 (17) | 0.37060 (6) | 0.11132 (18) | 0.0246 (3) | |
| H16 | 0.0717 | 0.4008 | 0.19 | 0.03* | |
| C17 | 0.38436 (18) | 0.38080 (6) | 0.2707 (2) | 0.0302 (3) | |
| O2 | 0.52342 (13) | 0.36681 (6) | 0.25195 (16) | 0.0444 (3) | |
| H2 | 0.624 (3) | 0.3858 (10) | 0.359 (3) | 0.085 (7)* | |
| O3 | 0.37325 (13) | 0.41309 (5) | 0.39438 (14) | 0.0404 (3) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0286 (8) | 0.0233 (7) | 0.0214 (6) | −0.0021 (6) | 0.0072 (6) | 0.0041 (5) |
| C2 | 0.0270 (8) | 0.0301 (8) | 0.0269 (7) | −0.0037 (6) | 0.0091 (6) | −0.0028 (6) |
| C3 | 0.0341 (9) | 0.0365 (9) | 0.0271 (7) | −0.0082 (7) | 0.0109 (6) | −0.0049 (6) |
| C4 | 0.0282 (8) | 0.0393 (9) | 0.0319 (8) | 0.0055 (7) | 0.0112 (6) | 0.0092 (7) |
| C5 | 0.0339 (8) | 0.0251 (8) | 0.0288 (7) | 0.0010 (6) | 0.0112 (6) | 0.0022 (6) |
| C6 | 0.0298 (8) | 0.0236 (8) | 0.0252 (7) | −0.0030 (6) | 0.0061 (6) | 0.0005 (6) |
| N1 | 0.0279 (7) | 0.0398 (8) | 0.0278 (6) | −0.0076 (6) | 0.0076 (5) | −0.0106 (6) |
| N2 | 0.0276 (7) | 0.0444 (9) | 0.0267 (6) | −0.0059 (6) | 0.0069 (5) | 0.0025 (6) |
| O1 | 0.0361 (6) | 0.0413 (7) | 0.0340 (6) | −0.0097 (5) | 0.0121 (5) | −0.0167 (5) |
| C7 | 0.0271 (8) | 0.0270 (8) | 0.0230 (6) | −0.0014 (6) | 0.0087 (6) | 0.0021 (6) |
| C8 | 0.0286 (8) | 0.0304 (8) | 0.0317 (7) | 0.0044 (6) | 0.0112 (6) | −0.0011 (6) |
| C9 | 0.0379 (9) | 0.0264 (8) | 0.0305 (7) | 0.0026 (6) | 0.0130 (7) | −0.0056 (6) |
| C10 | 0.0327 (8) | 0.0213 (7) | 0.0258 (7) | −0.0020 (6) | 0.0098 (6) | 0.0008 (6) |
| C11 | 0.0413 (9) | 0.0280 (8) | 0.0334 (8) | −0.0074 (7) | 0.0099 (7) | −0.0056 (6) |
| C12 | 0.0316 (9) | 0.0385 (10) | 0.0381 (8) | −0.0129 (7) | 0.0038 (7) | −0.0021 (7) |
| C13 | 0.0259 (8) | 0.0379 (9) | 0.0411 (8) | 0.0003 (7) | 0.0098 (6) | 0.0079 (7) |
| C14 | 0.0301 (8) | 0.0261 (8) | 0.0312 (7) | 0.0021 (6) | 0.0115 (6) | 0.0036 (6) |
| C15 | 0.0281 (8) | 0.0207 (7) | 0.0244 (6) | −0.0009 (6) | 0.0095 (6) | 0.0034 (5) |
| C16 | 0.0300 (8) | 0.0206 (7) | 0.0233 (7) | −0.0008 (6) | 0.0093 (6) | −0.0006 (5) |
| C17 | 0.0295 (8) | 0.0356 (9) | 0.0249 (7) | −0.0026 (7) | 0.0088 (6) | 0.0009 (6) |
| O2 | 0.0242 (6) | 0.0654 (9) | 0.0411 (6) | −0.0041 (5) | 0.0081 (5) | −0.0160 (6) |
| O3 | 0.0369 (7) | 0.0517 (8) | 0.0316 (6) | −0.0080 (5) | 0.0107 (5) | −0.0149 (5) |
Geometric parameters (Å, °)
| C1—C5 | 1.390 (2) | C8—H8 | 0.95 |
| C1—C2 | 1.3912 (19) | C9—C10 | 1.415 (2) |
| C1—C6 | 1.501 (2) | C9—H9 | 0.95 |
| C2—C3 | 1.376 (2) | C10—C11 | 1.415 (2) |
| C2—H2A | 0.95 | C10—C15 | 1.4269 (19) |
| C3—N2 | 1.335 (2) | C11—C12 | 1.363 (2) |
| C3—H3 | 0.95 | C11—H11 | 0.95 |
| C4—N2 | 1.339 (2) | C12—C13 | 1.405 (2) |
| C4—C5 | 1.378 (2) | C12—H12 | 0.95 |
| C4—H4 | 0.95 | C13—C14 | 1.366 (2) |
| C5—H5 | 0.95 | C13—H13 | 0.95 |
| C6—O1 | 1.2349 (16) | C14—C15 | 1.4182 (19) |
| C6—N1 | 1.3282 (19) | C14—H14 | 0.95 |
| N1—H1S | 0.904 (19) | C15—C16 | 1.412 (2) |
| N1—H1A | 0.862 (18) | C16—H16 | 0.95 |
| C7—C16 | 1.370 (2) | C17—O3 | 1.2215 (17) |
| C7—C8 | 1.421 (2) | C17—O2 | 1.3029 (18) |
| C7—C17 | 1.493 (2) | O2—H2 | 1.05 (3) |
| C8—C9 | 1.362 (2) | ||
| C5—C1—C2 | 117.82 (13) | C8—C9—C10 | 121.18 (13) |
| C5—C1—C6 | 119.06 (13) | C8—C9—H9 | 119.4 |
| C2—C1—C6 | 123.10 (13) | C10—C9—H9 | 119.4 |
| C3—C2—C1 | 118.72 (14) | C11—C10—C9 | 122.83 (14) |
| C3—C2—H2A | 120.6 | C11—C10—C15 | 118.43 (13) |
| C1—C2—H2A | 120.6 | C9—C10—C15 | 118.73 (13) |
| N2—C3—C2 | 123.51 (14) | C12—C11—C10 | 120.93 (14) |
| N2—C3—H3 | 118.2 | C12—C11—H11 | 119.5 |
| C2—C3—H3 | 118.2 | C10—C11—H11 | 119.5 |
| N2—C4—C5 | 122.39 (14) | C11—C12—C13 | 120.75 (14) |
| N2—C4—H4 | 118.8 | C11—C12—H12 | 119.6 |
| C5—C4—H4 | 118.8 | C13—C12—H12 | 119.6 |
| C4—C5—C1 | 119.62 (14) | C14—C13—C12 | 120.20 (14) |
| C4—C5—H5 | 120.2 | C14—C13—H13 | 119.9 |
| C1—C5—H5 | 120.2 | C12—C13—H13 | 119.9 |
| O1—C6—N1 | 123.36 (14) | C13—C14—C15 | 120.63 (14) |
| O1—C6—C1 | 119.40 (13) | C13—C14—H14 | 119.7 |
| N1—C6—C1 | 117.24 (12) | C15—C14—H14 | 119.7 |
| C6—N1—H1S | 119.8 (10) | C16—C15—C14 | 122.37 (13) |
| C6—N1—H1A | 119.9 (12) | C16—C15—C10 | 118.57 (12) |
| H1S—N1—H1A | 120.1 (15) | C14—C15—C10 | 119.06 (13) |
| C3—N2—C4 | 117.87 (13) | C7—C16—C15 | 121.72 (13) |
| C16—C7—C8 | 119.30 (13) | C7—C16—H16 | 119.1 |
| C16—C7—C17 | 119.37 (13) | C15—C16—H16 | 119.1 |
| C8—C7—C17 | 121.32 (13) | O3—C17—O2 | 123.73 (14) |
| C9—C8—C7 | 120.47 (13) | O3—C17—C7 | 122.62 (13) |
| C9—C8—H8 | 119.8 | O2—C17—C7 | 113.65 (13) |
| C7—C8—H8 | 119.8 | C17—O2—H2 | 111.5 (13) |
| C5—C1—C2—C3 | 1.1 (2) | C15—C10—C11—C12 | −0.2 (2) |
| C6—C1—C2—C3 | 179.67 (12) | C10—C11—C12—C13 | −0.2 (2) |
| C1—C2—C3—N2 | 1.5 (2) | C11—C12—C13—C14 | 0.6 (2) |
| N2—C4—C5—C1 | 1.7 (2) | C12—C13—C14—C15 | −0.6 (2) |
| C2—C1—C5—C4 | −2.6 (2) | C13—C14—C15—C16 | −178.83 (12) |
| C6—C1—C5—C4 | 178.77 (12) | C13—C14—C15—C10 | 0.2 (2) |
| C5—C1—C6—O1 | 23.6 (2) | C11—C10—C15—C16 | 179.24 (12) |
| C2—C1—C6—O1 | −155.01 (14) | C9—C10—C15—C16 | −1.78 (19) |
| C5—C1—C6—N1 | −156.32 (13) | C11—C10—C15—C14 | 0.13 (19) |
| C2—C1—C6—N1 | 25.11 (19) | C9—C10—C15—C14 | 179.11 (12) |
| C2—C3—N2—C4 | −2.4 (2) | C8—C7—C16—C15 | 0.5 (2) |
| C5—C4—N2—C3 | 0.8 (2) | C17—C7—C16—C15 | −178.93 (11) |
| C16—C7—C8—C9 | −1.5 (2) | C14—C15—C16—C7 | −179.74 (12) |
| C17—C7—C8—C9 | 177.85 (13) | C10—C15—C16—C7 | 1.2 (2) |
| C7—C8—C9—C10 | 0.9 (2) | C16—C7—C17—O3 | 11.1 (2) |
| C8—C9—C10—C11 | 179.69 (13) | C8—C7—C17—O3 | −168.30 (14) |
| C8—C9—C10—C15 | 0.8 (2) | C16—C7—C17—O2 | −169.70 (13) |
| C9—C10—C11—C12 | −179.09 (14) | C8—C7—C17—O2 | 10.9 (2) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1S···O1i | 0.904 (19) | 2.012 (19) | 2.914 (2) | 176 (2) |
| N1—H1A···O3ii | 0.862 (18) | 2.123 (18) | 2.9755 (17) | 170 (2) |
| O2—H2···N2 | 1.05 (3) | 1.56 (3) | 2.5999 (18) | 170 (2) |
Symmetry codes: (i) −x+3, −y+1, −z+2; (ii) x+1, y, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: FJ2462).
References
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- Báthori, N. B., Lemmerer, A., Venter, G. A., Bourne, S. A. & Caira, M. R. (2010). Cryst. Growth Des. 11, 75–87.
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- Bruker (2007). APEX2, SAINT-Plus and XPREP Bruker AXS Inc., Madison, Wisconsin, USA.
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811050057/fj2462sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811050057/fj2462Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811050057/fj2462Isup3.mol
Supplementary material file. DOI: 10.1107/S1600536811050057/fj2462Isup4.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


