Abstract
In the title compound, C15H20N2O3, the piperidine ring adopts a chair conformation, although the amide N atom is almost planar (bond angle sum = 359.7°). The molecule adopts an E conformation about the C=N bond, which allows for the formation of an intramolecular O—H⋯N hydrogen bond. In the crystal, molecules are linked by C—H⋯O interations, resulting in C(6) chains propagating in [010].
Related literature
For a related structure, see: Tas et al. (2007 ▶). For standard bond lengths, see: Allen et al. 1987) ▶.
Experimental
Crystal data
C15H20N2O3
M r = 276.33
Monoclinic,
a = 15.732 (3) Å
b = 9.1890 (18) Å
c = 10.414 (2) Å
β = 97.24 (3)°
V = 1493.5 (5) Å3
Z = 4
Mo Kα radiation
μ = 0.09 mm−1
T = 293 K
0.28 × 0.23 × 0.22 mm
Data collection
Enraf–Nonius CAD-4 diffractometer
Absorption correction: ψ scan (North et al., 1968) ▶ T min = 0.976, T max = 0.981
3098 measured reflections
2922 independent reflections
1750 reflections with I > 2σ(I)
R int = 0.032
3 standard reflections every 200 reflections intensity decay: 1%
Refinement
R[F 2 > 2σ(F 2)] = 0.065
wR(F 2) = 0.174
S = 1.09
2922 reflections
183 parameters
H-atom parameters constrained
Δρmax = 0.21 e Å−3
Δρmin = −0.16 e Å−3
Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97.
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811049750/hb6521sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811049750/hb6521Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811049750/hb6521Isup3.cdx
Supplementary material file. DOI: 10.1107/S1600536811049750/hb6521Isup4.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O1—H1⋯N1 | 0.82 | 1.87 | 2.592 (3) | 146 |
| C15—H15B⋯O2i | 0.96 | 2.56 | 3.475 (5) | 160 |
Symmetry code: (i)
.
Acknowledgments
We are grateful to the Fundamental Research Funds for the Central Universities (ZYGX2009J085) and the China Postdoctoral Science Foundation (20110491380) for support.
supplementary crystallographic information
Comment
The cystal structure of the Schiff base N-(1-ethoxycarbonyl)piperidine-4-yl)-3,5-di-t-butylsalicylaldimine, derived from ethyl 4-aminopiperidine-1-carboxylate and 3,5-di-tert-butylsalicylaldehyde, has been reported before (Tas et al., 2007). There are two tert butyl subsitituents on the 3- and 5- positons, as compared with the title compound. The molecular structure of title compound (I), Fig. 1, possesses an E configuration about C7=N1 double bond, and the bond length 1.268 (3) Å is in the normal range. (Allen et al. 1987). The C13=O2 double bond 1.208 (4) Å. The C2—O1, N2—C13 and C13—O3 single bond lengths are 1.352 (3), 1.343 (4) and 1.347 (4) Å, respectively. All these bond lengths is comparable to that observed in the reference compound. (Tas et al., 2007) The torsion angle of C9—C8—N1—C7 and C12—C8—N1—C7 is -108.8 (3) ° and 131.3 (3) °. The Rms deviation of phenyl ring is 0.0072 Å, and the Rms of six-member piperidine ring of chair conformation is 0.2282 Å. The The dihedral angle between phenyl plane and piperidine ring in title compound is 77.58 (10) °. There is an intramolecular hydrogen bond, O1—H1···N1, together with one kind of intermolecular hydrogen bond C15—H15B···O2 in the crystal structure of title compound. All these hydrogen bonds the molecule to form an extended network along b axis, Fig. 2.
Experimental
The title compound was prepared by stirring a mixture of salicylaldehyde (122 mg, 1 mmol) and ethyl 4-aminopiperidine-1-carboxylate (172 mg, 1 mmol) in methanol (15 ml) for 3 h at room temperature. After keeping the solution in air for 4 d, yellow block-shaped crystals of (I) were formed. The crystals were isolated, washed three times with methanol and dried in a vacuum desiccator containing anhydrous CaCl2.
Refinement
All the H atoms, were placed in idealized positions (C—H = 0.93- 0.96 Å, O—H = 0.82 Å) and refined as riding with Uiso(H) = 1.2Ueq(C) and Uiso(H) = 1.5Ueq(O).
Figures
Fig. 1.
The structure of the title compound (I) showing 35% probability displacement ellipsoids.
Fig. 2.
The crystal packing of (I), viewed along the b axis. Hydrogen bonds are shown as dashed lines.
Crystal data
| C15H20N2O3 | F(000) = 592 |
| Mr = 276.33 | Dx = 1.229 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 1428 reflections |
| a = 15.732 (3) Å | θ = 2.5–24.2° |
| b = 9.1890 (18) Å | µ = 0.09 mm−1 |
| c = 10.414 (2) Å | T = 293 K |
| β = 97.24 (3)° | Block, yellow |
| V = 1493.5 (5) Å3 | 0.28 × 0.23 × 0.22 mm |
| Z = 4 |
Data collection
| Enraf–Nonius CAD-4 diffractometer | 1750 reflections with I > 2σ(I) |
| Radiation source: fine-focus sealed tube | Rint = 0.032 |
| graphite | θmax = 26.0°, θmin = 1.3° |
| ω/2θ scan | h = −19→19 |
| Absorption correction: ψ scan (North et al., 1968) | k = −11→0 |
| Tmin = 0.976, Tmax = 0.981 | l = 0→12 |
| 3098 measured reflections | 3 standard reflections every 200 reflections |
| 2922 independent reflections | intensity decay: 1% |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.065 | H-atom parameters constrained |
| wR(F2) = 0.174 | w = 1/[σ2(Fo2) + (0.0611P)2 + 0.6373P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.09 | (Δ/σ)max < 0.001 |
| 2922 reflections | Δρmax = 0.21 e Å−3 |
| 183 parameters | Δρmin = −0.16 e Å−3 |
| 0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.022 (3) |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | −0.07284 (18) | 0.1352 (3) | 0.1715 (3) | 0.0491 (7) | |
| C2 | −0.11096 (19) | 0.0759 (3) | 0.2735 (3) | 0.0503 (7) | |
| C3 | −0.19939 (19) | 0.0618 (3) | 0.2628 (3) | 0.0619 (8) | |
| H3 | −0.2248 | 0.0232 | 0.3312 | 0.074* | |
| C4 | −0.2494 (2) | 0.1047 (4) | 0.1517 (3) | 0.0632 (9) | |
| H4 | −0.3087 | 0.0962 | 0.1460 | 0.076* | |
| C5 | −0.2130 (2) | 0.1602 (4) | 0.0488 (3) | 0.0661 (9) | |
| H5 | −0.2471 | 0.1874 | −0.0268 | 0.079* | |
| C6 | −0.1251 (2) | 0.1749 (4) | 0.0594 (3) | 0.0624 (8) | |
| H6 | −0.1003 | 0.2124 | −0.0100 | 0.075* | |
| C7 | 0.01943 (18) | 0.1592 (3) | 0.1838 (3) | 0.0515 (7) | |
| H7 | 0.0431 | 0.2014 | 0.1153 | 0.062* | |
| C8 | 0.16035 (17) | 0.1521 (3) | 0.2946 (3) | 0.0526 (7) | |
| H8 | 0.1725 | 0.2147 | 0.2228 | 0.063* | |
| C9 | 0.2061 (2) | 0.0066 (4) | 0.2873 (3) | 0.0645 (9) | |
| H9A | 0.1913 | −0.0348 | 0.2017 | 0.077* | |
| H9B | 0.1865 | −0.0601 | 0.3496 | 0.077* | |
| C10 | 0.3033 (2) | 0.0227 (4) | 0.3151 (3) | 0.0677 (9) | |
| H10A | 0.3300 | −0.0725 | 0.3170 | 0.081* | |
| H10B | 0.3242 | 0.0792 | 0.2469 | 0.081* | |
| C11 | 0.2866 (2) | 0.2392 (4) | 0.4458 (3) | 0.0680 (9) | |
| H11A | 0.3062 | 0.3029 | 0.3813 | 0.082* | |
| H11B | 0.3038 | 0.2814 | 0.5305 | 0.082* | |
| C12 | 0.18953 (18) | 0.2265 (3) | 0.4225 (3) | 0.0557 (8) | |
| H12A | 0.1697 | 0.1713 | 0.4923 | 0.067* | |
| H12B | 0.1644 | 0.3229 | 0.4224 | 0.067* | |
| C13 | 0.37125 (18) | 0.0361 (4) | 0.5437 (3) | 0.0584 (8) | |
| C14 | 0.4508 (2) | −0.1707 (5) | 0.6252 (4) | 0.0828 (11) | |
| H14A | 0.4184 | −0.1817 | 0.6980 | 0.099* | |
| H14B | 0.5018 | −0.1140 | 0.6531 | 0.099* | |
| C15 | 0.4747 (3) | −0.3153 (5) | 0.5780 (5) | 0.1084 (15) | |
| H15A | 0.4240 | −0.3724 | 0.5553 | 0.163* | |
| H15B | 0.5117 | −0.3639 | 0.6449 | 0.163* | |
| H15C | 0.5040 | −0.3031 | 0.5032 | 0.163* | |
| N1 | 0.06833 (14) | 0.1243 (3) | 0.2853 (2) | 0.0528 (6) | |
| N2 | 0.32588 (16) | 0.0948 (3) | 0.4385 (2) | 0.0626 (7) | |
| O1 | −0.06447 (13) | 0.0300 (2) | 0.38413 (19) | 0.0671 (6) | |
| H1 | −0.0133 | 0.0389 | 0.3780 | 0.101* | |
| O2 | 0.38554 (15) | 0.0953 (3) | 0.6478 (2) | 0.0837 (8) | |
| O3 | 0.39911 (13) | −0.0984 (3) | 0.5189 (2) | 0.0702 (7) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0515 (17) | 0.0451 (16) | 0.0500 (17) | 0.0037 (13) | 0.0037 (13) | 0.0011 (13) |
| C2 | 0.0551 (18) | 0.0422 (16) | 0.0534 (17) | 0.0012 (13) | 0.0065 (14) | −0.0017 (14) |
| C3 | 0.0563 (19) | 0.061 (2) | 0.070 (2) | −0.0036 (15) | 0.0119 (16) | −0.0025 (17) |
| C4 | 0.0478 (17) | 0.064 (2) | 0.078 (2) | 0.0019 (15) | 0.0065 (17) | −0.0118 (18) |
| C5 | 0.059 (2) | 0.069 (2) | 0.066 (2) | 0.0056 (17) | −0.0080 (17) | −0.0065 (17) |
| C6 | 0.063 (2) | 0.070 (2) | 0.0534 (18) | 0.0038 (16) | 0.0041 (15) | 0.0062 (16) |
| C7 | 0.0537 (17) | 0.0496 (17) | 0.0518 (17) | −0.0005 (14) | 0.0089 (14) | 0.0064 (14) |
| C8 | 0.0487 (16) | 0.0589 (18) | 0.0506 (17) | 0.0013 (14) | 0.0076 (13) | 0.0110 (14) |
| C9 | 0.063 (2) | 0.071 (2) | 0.0567 (18) | 0.0102 (16) | −0.0036 (15) | −0.0106 (16) |
| C10 | 0.065 (2) | 0.079 (2) | 0.0577 (19) | 0.0233 (18) | 0.0004 (16) | 0.0001 (17) |
| C11 | 0.059 (2) | 0.062 (2) | 0.080 (2) | −0.0032 (16) | −0.0050 (17) | −0.0067 (18) |
| C12 | 0.0566 (18) | 0.0505 (17) | 0.0603 (18) | 0.0047 (14) | 0.0087 (14) | 0.0013 (15) |
| C13 | 0.0370 (15) | 0.077 (2) | 0.060 (2) | −0.0037 (15) | 0.0008 (14) | 0.0034 (18) |
| C14 | 0.060 (2) | 0.105 (3) | 0.079 (2) | 0.005 (2) | −0.0110 (18) | 0.025 (2) |
| C15 | 0.080 (3) | 0.099 (3) | 0.135 (4) | 0.015 (2) | −0.029 (3) | 0.034 (3) |
| N1 | 0.0464 (14) | 0.0562 (15) | 0.0551 (15) | 0.0019 (11) | 0.0036 (11) | 0.0084 (12) |
| N2 | 0.0598 (16) | 0.0654 (17) | 0.0588 (16) | 0.0088 (13) | −0.0075 (12) | −0.0021 (14) |
| O1 | 0.0574 (13) | 0.0852 (16) | 0.0590 (13) | −0.0027 (11) | 0.0085 (10) | 0.0187 (12) |
| O2 | 0.0713 (16) | 0.113 (2) | 0.0625 (15) | −0.0005 (14) | −0.0089 (12) | −0.0106 (15) |
| O3 | 0.0568 (13) | 0.0798 (16) | 0.0697 (14) | 0.0101 (12) | −0.0085 (11) | 0.0118 (12) |
Geometric parameters (Å, °)
| C1—C6 | 1.389 (4) | C10—N2 | 1.450 (4) |
| C1—C2 | 1.394 (4) | C10—H10A | 0.9700 |
| C1—C7 | 1.458 (4) | C10—H10B | 0.9700 |
| C2—O1 | 1.352 (3) | C11—N2 | 1.470 (4) |
| C2—C3 | 1.388 (4) | C11—C12 | 1.520 (4) |
| C3—C4 | 1.373 (4) | C11—H11A | 0.9700 |
| C3—H3 | 0.9300 | C11—H11B | 0.9700 |
| C4—C5 | 1.375 (4) | C12—H12A | 0.9700 |
| C4—H4 | 0.9300 | C12—H12B | 0.9700 |
| C5—C6 | 1.380 (4) | C13—O2 | 1.208 (4) |
| C5—H5 | 0.9300 | C13—N2 | 1.343 (4) |
| C6—H6 | 0.9300 | C13—O3 | 1.347 (4) |
| C7—N1 | 1.268 (3) | C14—O3 | 1.449 (4) |
| C7—H7 | 0.9300 | C14—C15 | 1.482 (6) |
| C8—N1 | 1.461 (3) | C14—H14A | 0.9700 |
| C8—C12 | 1.516 (4) | C14—H14B | 0.9700 |
| C8—C9 | 1.525 (4) | C15—H15A | 0.9600 |
| C8—H8 | 0.9800 | C15—H15B | 0.9600 |
| C9—C10 | 1.527 (4) | C15—H15C | 0.9600 |
| C9—H9A | 0.9700 | O1—H1 | 0.8200 |
| C9—H9B | 0.9700 | ||
| C6—C1—C2 | 118.5 (3) | N2—C10—H10B | 109.7 |
| C6—C1—C7 | 120.7 (3) | C9—C10—H10B | 109.7 |
| C2—C1—C7 | 120.8 (3) | H10A—C10—H10B | 108.2 |
| O1—C2—C3 | 117.9 (3) | N2—C11—C12 | 110.1 (3) |
| O1—C2—C1 | 122.2 (3) | N2—C11—H11A | 109.6 |
| C3—C2—C1 | 119.9 (3) | C12—C11—H11A | 109.6 |
| C4—C3—C2 | 120.2 (3) | N2—C11—H11B | 109.6 |
| C4—C3—H3 | 119.9 | C12—C11—H11B | 109.6 |
| C2—C3—H3 | 119.9 | H11A—C11—H11B | 108.2 |
| C3—C4—C5 | 120.8 (3) | C8—C12—C11 | 111.2 (2) |
| C3—C4—H4 | 119.6 | C8—C12—H12A | 109.4 |
| C5—C4—H4 | 119.6 | C11—C12—H12A | 109.4 |
| C4—C5—C6 | 119.1 (3) | C8—C12—H12B | 109.4 |
| C4—C5—H5 | 120.5 | C11—C12—H12B | 109.4 |
| C6—C5—H5 | 120.5 | H12A—C12—H12B | 108.0 |
| C5—C6—C1 | 121.5 (3) | O2—C13—N2 | 124.8 (3) |
| C5—C6—H6 | 119.3 | O2—C13—O3 | 123.8 (3) |
| C1—C6—H6 | 119.3 | N2—C13—O3 | 111.3 (3) |
| N1—C7—C1 | 121.8 (3) | O3—C14—C15 | 107.4 (3) |
| N1—C7—H7 | 119.1 | O3—C14—H14A | 110.2 |
| C1—C7—H7 | 119.1 | C15—C14—H14A | 110.2 |
| N1—C8—C12 | 108.9 (2) | O3—C14—H14B | 110.2 |
| N1—C8—C9 | 108.2 (2) | C15—C14—H14B | 110.2 |
| C12—C8—C9 | 110.3 (2) | H14A—C14—H14B | 108.5 |
| N1—C8—H8 | 109.8 | C14—C15—H15A | 109.5 |
| C12—C8—H8 | 109.8 | C14—C15—H15B | 109.5 |
| C9—C8—H8 | 109.8 | H15A—C15—H15B | 109.5 |
| C8—C9—C10 | 111.9 (3) | C14—C15—H15C | 109.5 |
| C8—C9—H9A | 109.2 | H15A—C15—H15C | 109.5 |
| C10—C9—H9A | 109.2 | H15B—C15—H15C | 109.5 |
| C8—C9—H9B | 109.2 | C7—N1—C8 | 120.2 (2) |
| C10—C9—H9B | 109.2 | C13—N2—C10 | 125.9 (3) |
| H9A—C9—H9B | 107.9 | C13—N2—C11 | 120.3 (3) |
| N2—C10—C9 | 109.9 (3) | C10—N2—C11 | 113.6 (2) |
| N2—C10—H10A | 109.7 | C2—O1—H1 | 109.5 |
| C9—C10—H10A | 109.7 | C13—O3—C14 | 116.0 (3) |
| C6—C1—C2—O1 | 177.8 (3) | C9—C8—C12—C11 | 53.5 (3) |
| C7—C1—C2—O1 | −4.2 (4) | N2—C11—C12—C8 | −55.7 (4) |
| C6—C1—C2—C3 | −1.9 (4) | C1—C7—N1—C8 | −179.1 (3) |
| C7—C1—C2—C3 | 176.2 (3) | C12—C8—N1—C7 | 131.3 (3) |
| O1—C2—C3—C4 | −179.0 (3) | C9—C8—N1—C7 | −108.8 (3) |
| C1—C2—C3—C4 | 0.6 (4) | O2—C13—N2—C10 | −175.8 (3) |
| C2—C3—C4—C5 | 0.9 (5) | O3—C13—N2—C10 | 4.1 (4) |
| C3—C4—C5—C6 | −1.2 (5) | O2—C13—N2—C11 | −2.3 (5) |
| C4—C5—C6—C1 | 0.0 (5) | O3—C13—N2—C11 | 177.6 (3) |
| C2—C1—C6—C5 | 1.6 (5) | C9—C10—N2—C13 | 115.9 (3) |
| C7—C1—C6—C5 | −176.5 (3) | C9—C10—N2—C11 | −58.0 (4) |
| C6—C1—C7—N1 | 179.7 (3) | C12—C11—N2—C13 | −115.3 (3) |
| C2—C1—C7—N1 | 1.8 (4) | C12—C11—N2—C10 | 59.0 (4) |
| N1—C8—C9—C10 | −172.0 (2) | O2—C13—O3—C14 | −1.6 (4) |
| C12—C8—C9—C10 | −53.0 (3) | N2—C13—O3—C14 | 178.5 (3) |
| C8—C9—C10—N2 | 54.5 (4) | C15—C14—O3—C13 | −179.8 (3) |
| N1—C8—C12—C11 | 172.1 (2) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1—H1···N1 | 0.82 | 1.87 | 2.592 (3) | 146 |
| C15—H15B···O2i | 0.96 | 2.56 | 3.475 (5) | 160 |
Symmetry codes: (i) −x+1, y−1/2, −z+3/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB6521).
References
- Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.
- Enraf–Nonius (1989). CAD-4 Software Enraf–Nonius, Delft, The Netherlands.
- Harms, K. & Wocadlo, S. (1995). XCAD4 University of Marburg, Germany.
- North, A. C. T., Phillips, D. C. & Mathews, F. S. (1968). Acta Cryst. A24, 351–359.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Tas, E., Ucar, I., Kasumov, V. T., Kilic, A. & Bulut, A. (2007). Spectrochim. Acta Part A, 68, 463–468. [DOI] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811049750/hb6521sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811049750/hb6521Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811049750/hb6521Isup3.cdx
Supplementary material file. DOI: 10.1107/S1600536811049750/hb6521Isup4.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


