Skip to main content
Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Oct 22;67(Pt 11):o2983. doi: 10.1107/S1600536811042097

5,5′-Seleno­bis­(2-hy­droxy­benzaldehyde)

Ming-Hu Wu a,*, Wen-Ju Liu b
PMCID: PMC3247385  PMID: 22220003

Abstract

In the title mol­ecule, C14H10O4Se, the dihedral angle between the two benzene rings is 74.6 (1)°. Both hy­droxy­benzaldehyde groups form intra­molecular O—H⋯O hydrogen bonds. In the crystal, pairs of mol­ecules are linked by pairs of weak C—H⋯π(arene) inter­actions, forming centrosymmetric dimers. In addition, mol­ecules are linked by π–π stacking inter­actions, with a centroid–centroid distance of 3.785 (2) Å, forming chains along the c axis.

Related literature

For background to organo-selenium compounds, see: Mukherjee et al. (2006); Phadnis et al. (2005); Braga et al. (2005); Mugesh et al. (2001).graphic file with name e-67-o2983-scheme1.jpg

Experimental

Crystal data

  • C14H10O4Se

  • M r = 321.18

  • Monoclinic, Inline graphic

  • a = 7.7652 (5) Å

  • b = 11.9129 (8) Å

  • c = 13.3353 (9) Å

  • β = 90.304 (1)°

  • V = 1233.58 (14) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 3.05 mm−1

  • T = 296 K

  • 0.30 × 0.20 × 0.20 mm

Data collection

  • Bruker SMART APEX CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2001) T min = 0.461, T max = 0.581

  • 7045 measured reflections

  • 2550 independent reflections

  • 2041 reflections with I > 2σ(I)

  • R int = 0.100

Refinement

  • R[F 2 > 2σ(F 2)] = 0.041

  • wR(F 2) = 0.122

  • S = 1.08

  • 2550 reflections

  • 172 parameters

  • H-atom parameters constrained

  • Δρmax = 0.64 e Å−3

  • Δρmin = −0.54 e Å−3

Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: PLATON.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811042097/lh5352sup1.cif

e-67-o2983-sup1.cif (15.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811042097/lh5352Isup2.hkl

e-67-o2983-Isup2.hkl (125.3KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811042097/lh5352Isup3.cdx

Supplementary material file. DOI: 10.1107/S1600536811042097/lh5352Isup4.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg is the centroid of the C8-C13 ring.

D—H⋯A D—H H⋯A DA D—H⋯A
O1—H1⋯O2 0.82 1.90 2.621 (4) 146
O3—H3A⋯O4 0.82 1.95 2.660 (4) 145
C10—H10⋯Cgi 0.93 2.89 3.763 (3) 158

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors gratefully acknowledge financial support of this work as a project of Guangdong Provincial Department of Education.

supplementary crystallographic information

Comment

The organo-selenium nucleus is one of the most abundant structural nucleus found in natural products and biologically active molecules (e.g., seleno-carbohydrates,selenoamino acids,and seleno-peptides)(Mukherjee et al.,2006; Phadnis et al., 2005; Braga et al., 2005). Moreover, organoselenium compounds have emerged as an exceptional class of structures that exemplify a role in biochemical processes, serving as important therapeutic compounds ranging from antiviral and anticancer agents to a variety of situations where free radicals are involved (Mugesh et al., 2001). We are currently studing the synthesis of a new series of organoselenium compounds, such as selanes, diselenides and macrocyclic Schiff bases containing selenium atoms. Reported herein are the synthesis and X-ray structure of the title compound.

In the molecule (Fig. 1), the dihedral angle between the two benzene rings is 74.6 (1)°. Two intramolecular O—H···O hydrogen bonds are present in the molecule. The Se1—C1 and Se1—C8 bond lengths are the same within experimental error. The Se1—C1—C6—C5 and Se1—C8—C13—C12 torsional angles of -174.5 (2)° and -174.6 (2)°, respectively, indicate a slight deviation of the selenium atoms from the mean planes of the benzene rings.

In the crystal, pairs of molecules are linked by weak C—H···π (arene) interactions (see Table 1, Fig. 2). In addition, molecules are linked by Cg1···Cg2ii (symmetry code (ii): -1/2+x, 1/2-y, 1/2+z) and Cg2···Cg1 iii (symmetry code (iii) : 1/2+x, 1/2-y, -1/2+z) π–π stacking interactions with a centroid-centroid distance of 3.785 (2)Å to form one-dimensional chains along the c axis (Fig. 3). Cg1 and Cg2 are the centroids of the C1-C6 and C8-C13 rings.

Experimental

A mixture of salicylaldehyde (87.93 g, 0.72 mol), selenium dioxide (26.63 g, 0.24 mol)and concentrated hydrochloric acid (132 ml) was stirred for 0.5 h at room temperature. Then, the mixture was further stirred for 50 h at 353 K. The resulting reddish brown solid was filtered, washed with water and ethanol. The obtained yellowish solid was recrystallized with ethyl acetate and etanol (v:v=5:1) to give yellowish crystals of the title compound in yield 20.8%, which are suitable for X-ray analysis.

Refinement

All H atoms were placed in calculated positions (C—H = 0.93 Å, O—H = 0.82Å) and included in a riding-model approximation, with Uiso (H) = 1.2Uiso (C) or 1.5Uiso (O)

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I) with 50% probability displacement ellipsoids for non-H atoms.

Fig. 2.

Fig. 2.

The crystal packing showing the hydrogen bonding interactions as thin solid lines. H atoms not involved in hydrogen bonds have been omitted.

Fig. 3.

Fig. 3.

Part of the crystal structure showing π–π stacking interactions between benzene rings as thin solid lines.

Crystal data

C14H10O4Se F(000) = 640
Mr = 321.18 Dx = 1.729 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 3183 reflections
a = 7.7652 (5) Å θ = 2.3–27.8°
b = 11.9129 (8) Å µ = 3.05 mm1
c = 13.3353 (9) Å T = 296 K
β = 90.304 (1)° Block, yellow
V = 1233.58 (14) Å3 0.30 × 0.20 × 0.20 mm
Z = 4

Data collection

Bruker SMART APEX CCD diffractometer 2550 independent reflections
Radiation source: fine-focus sealed tube 2041 reflections with I > 2σ(I)
graphite Rint = 0.100
φ and ω scans θmax = 26.5°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2001) h = −9→9
Tmin = 0.461, Tmax = 0.581 k = −10→14
7045 measured reflections l = −16→16

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.122 H-atom parameters constrained
S = 1.08 w = 1/[σ2(Fo2) + (0.0633P)2] where P = (Fo2 + 2Fc2)/3
2550 reflections (Δ/σ)max = 0.001
172 parameters Δρmax = 0.64 e Å3
0 restraints Δρmin = −0.54 e Å3

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Se1 0.10731 (4) 0.81234 (3) 0.62308 (2) 0.04535 (18)
C8 0.0015 (4) 0.7027 (3) 0.7079 (2) 0.0347 (7)
C1 0.2434 (4) 0.7156 (3) 0.5393 (2) 0.0334 (6)
C5 0.5117 (4) 0.6774 (2) 0.4565 (2) 0.0340 (7)
C6 0.4134 (4) 0.7406 (3) 0.5238 (2) 0.0356 (7)
H6 0.4640 0.8000 0.5583 0.043*
O1 0.5229 (3) 0.5247 (2) 0.33974 (17) 0.0514 (6)
H1 0.6219 0.5483 0.3355 0.077*
C13 −0.1686 (4) 0.7131 (3) 0.7323 (2) 0.0369 (7)
H13 −0.2337 0.7699 0.7028 0.044*
C3 0.2627 (4) 0.5615 (3) 0.4229 (2) 0.0412 (7)
H3 0.2116 0.5011 0.3901 0.049*
O2 0.7856 (3) 0.6539 (2) 0.38446 (19) 0.0577 (7)
O4 −0.5065 (3) 0.5951 (2) 0.8838 (2) 0.0593 (7)
C4 0.4354 (4) 0.5874 (3) 0.4060 (2) 0.0350 (7)
C12 −0.2473 (4) 0.6400 (3) 0.8007 (2) 0.0366 (7)
C2 0.1688 (4) 0.6257 (3) 0.4884 (2) 0.0389 (7)
H2 0.0534 0.6089 0.4990 0.047*
C7 0.6922 (4) 0.7058 (3) 0.4396 (3) 0.0443 (8)
H7 0.7378 0.7674 0.4733 0.053*
C10 0.0214 (4) 0.5417 (3) 0.8167 (3) 0.0504 (9)
H10 0.0866 0.4834 0.8436 0.060*
C9 0.0956 (4) 0.6158 (3) 0.7512 (3) 0.0463 (8)
H9 0.2115 0.6077 0.7354 0.056*
C11 −0.1501 (4) 0.5530 (3) 0.8433 (3) 0.0456 (8)
O3 −0.2165 (3) 0.4793 (2) 0.9087 (2) 0.0676 (8)
H3A −0.3182 0.4942 0.9183 0.101*
C14 −0.4287 (4) 0.6536 (3) 0.8254 (3) 0.0490 (8)
H14 −0.4889 0.7113 0.7941 0.059*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Se1 0.0460 (2) 0.0397 (2) 0.0505 (3) 0.00471 (13) 0.01921 (17) −0.00162 (15)
C8 0.0277 (15) 0.0413 (18) 0.0351 (15) 0.0014 (12) 0.0057 (12) −0.0033 (13)
C1 0.0240 (14) 0.0430 (16) 0.0332 (15) 0.0034 (12) 0.0040 (12) −0.0008 (14)
C5 0.0275 (15) 0.0406 (17) 0.0339 (14) −0.0006 (12) 0.0046 (12) 0.0039 (13)
C6 0.0374 (16) 0.0373 (17) 0.0320 (15) −0.0022 (13) 0.0003 (13) −0.0048 (14)
O1 0.0497 (13) 0.0560 (15) 0.0485 (13) 0.0027 (11) 0.0165 (11) −0.0142 (12)
C13 0.0354 (16) 0.0412 (17) 0.0341 (15) 0.0065 (13) 0.0019 (13) −0.0070 (14)
C3 0.0424 (17) 0.0436 (18) 0.0376 (16) −0.0076 (14) 0.0034 (14) −0.0079 (15)
O2 0.0352 (14) 0.0726 (17) 0.0653 (16) 0.0044 (12) 0.0168 (12) −0.0026 (15)
O4 0.0416 (14) 0.0705 (18) 0.0661 (16) −0.0140 (12) 0.0206 (12) −0.0110 (14)
C4 0.0287 (14) 0.0457 (18) 0.0306 (14) 0.0029 (13) 0.0023 (12) 0.0015 (14)
C12 0.0291 (15) 0.0434 (18) 0.0373 (16) −0.0036 (13) 0.0032 (13) −0.0113 (14)
C2 0.0253 (15) 0.050 (2) 0.0410 (17) −0.0050 (13) 0.0053 (13) 0.0005 (15)
C7 0.0268 (16) 0.058 (2) 0.0483 (18) −0.0035 (14) 0.0002 (14) 0.0020 (17)
C10 0.0308 (16) 0.049 (2) 0.072 (2) 0.0094 (15) 0.0054 (16) 0.0137 (19)
C9 0.0317 (16) 0.050 (2) 0.058 (2) 0.0061 (14) 0.0081 (15) −0.0037 (17)
C11 0.0453 (18) 0.0418 (19) 0.0496 (18) −0.0030 (15) 0.0058 (15) −0.0008 (17)
O3 0.0511 (15) 0.0664 (18) 0.086 (2) −0.0042 (13) 0.0179 (14) 0.0289 (16)
C14 0.0383 (19) 0.058 (2) 0.0504 (19) −0.0010 (16) 0.0074 (16) −0.0098 (19)

Geometric parameters (Å, °)

Se1—C8 1.916 (3) C3—C4 1.395 (4)
Se1—C1 1.925 (3) C3—H3 0.9300
C8—C13 1.368 (4) O2—C7 1.206 (4)
C8—C9 1.391 (4) O4—C14 1.209 (4)
C1—C6 1.370 (4) C12—C11 1.401 (5)
C1—C2 1.392 (4) C12—C14 1.457 (4)
C5—C4 1.396 (4) C2—H2 0.9300
C5—C6 1.401 (4) C7—H7 0.9300
C5—C7 1.461 (4) C10—C9 1.370 (5)
C6—H6 0.9300 C10—C11 1.386 (5)
O1—C4 1.344 (4) C10—H10 0.9300
O1—H1 0.8200 C9—H9 0.9300
C13—C12 1.403 (5) C11—O3 1.343 (4)
C13—H13 0.9300 O3—H3A 0.8200
C3—C2 1.374 (4) C14—H14 0.9300
C8—Se1—C1 99.96 (14) C11—C12—C13 119.1 (3)
C13—C8—C9 118.3 (3) C11—C12—C14 120.6 (3)
C13—C8—Se1 119.7 (2) C13—C12—C14 120.2 (3)
C9—C8—Se1 121.8 (2) C3—C2—C1 121.2 (3)
C6—C1—C2 119.5 (3) C3—C2—H2 119.4
C6—C1—Se1 119.3 (2) C1—C2—H2 119.4
C2—C1—Se1 121.0 (2) O2—C7—C5 123.8 (3)
C4—C5—C6 119.4 (3) O2—C7—H7 118.1
C4—C5—C7 120.6 (3) C5—C7—H7 118.1
C6—C5—C7 120.0 (3) C9—C10—C11 120.5 (3)
C1—C6—C5 120.5 (3) C9—C10—H10 119.7
C1—C6—H6 119.7 C11—C10—H10 119.7
C5—C6—H6 119.7 C10—C9—C8 121.5 (3)
C4—O1—H1 109.5 C10—C9—H9 119.3
C8—C13—C12 121.5 (3) C8—C9—H9 119.3
C8—C13—H13 119.2 O3—C11—C10 118.4 (3)
C12—C13—H13 119.2 O3—C11—C12 122.6 (3)
C2—C3—C4 119.5 (3) C10—C11—C12 119.0 (3)
C2—C3—H3 120.2 C11—O3—H3A 109.5
C4—C3—H3 120.2 O4—C14—C12 124.7 (4)
O1—C4—C3 118.2 (3) O4—C14—H14 117.7
O1—C4—C5 121.9 (3) C12—C14—H14 117.7
C3—C4—C5 119.9 (3)
C1—Se1—C8—C13 −138.5 (3) C8—C13—C12—C14 179.7 (3)
C1—Se1—C8—C9 45.8 (3) C4—C3—C2—C1 −0.8 (5)
C8—Se1—C1—C6 −131.5 (3) C6—C1—C2—C3 0.0 (5)
C8—Se1—C1—C2 53.3 (3) Se1—C1—C2—C3 175.2 (2)
C2—C1—C6—C5 0.8 (5) C4—C5—C7—O2 −1.6 (5)
Se1—C1—C6—C5 −174.5 (2) C6—C5—C7—O2 178.4 (3)
C4—C5—C6—C1 −0.9 (5) C11—C10—C9—C8 −1.3 (6)
C7—C5—C6—C1 179.2 (3) C13—C8—C9—C10 0.1 (5)
C9—C8—C13—C12 1.3 (5) Se1—C8—C9—C10 175.9 (3)
Se1—C8—C13—C12 −174.6 (2) C9—C10—C11—O3 −179.1 (3)
C2—C3—C4—O1 −178.4 (3) C9—C10—C11—C12 1.1 (6)
C2—C3—C4—C5 0.7 (5) C13—C12—C11—O3 −179.5 (3)
C6—C5—C4—O1 179.2 (3) C14—C12—C11—O3 −0.7 (5)
C7—C5—C4—O1 −0.8 (5) C13—C12—C11—C10 0.2 (5)
C6—C5—C4—C3 0.1 (4) C14—C12—C11—C10 179.0 (3)
C7—C5—C4—C3 −179.9 (3) C11—C12—C14—O4 1.6 (5)
C8—C13—C12—C11 −1.4 (5) C13—C12—C14—O4 −179.5 (3)

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the C8-C13 ring.
D—H···A D—H H···A D···A D—H···A
O1—H1···O2 0.82 1.90 2.621 (4) 146.
O3—H3A···O4 0.82 1.95 2.660 (4) 145.
C10—H10···Cgi 0.93 2.89 3.763 (3) 158

Symmetry codes: (i) −x+2, −y+1, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: LH5352).

References

  1. Braga, A. L., Lüdtke, D. S., Paixao, M. W., Alberto, E. E., Stefabi, H. A. & Juliano, L. (2005). Eur. J. Org. Chem. 20, 4260–4264.
  2. Bruker (2001). SMART, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Mugesh, G., Du Mont, W. W. & Sies, H. (2001). Chem. Rev. 101, 2125–2180. [DOI] [PubMed]
  4. Mukherjee, C., Tiwari, P. & Misra, A. K. (2006). Tetrahedron Lett. 47, 441–445.
  5. Phadnis, P. P. & Mugesh, G. (2005). Org. Biomol. Chem. 3, 2476–2481. [DOI] [PubMed]
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811042097/lh5352sup1.cif

e-67-o2983-sup1.cif (15.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811042097/lh5352Isup2.hkl

e-67-o2983-Isup2.hkl (125.3KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811042097/lh5352Isup3.cdx

Supplementary material file. DOI: 10.1107/S1600536811042097/lh5352Isup4.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

RESOURCES