Abstract
In the title compound, C12H10N2·C8H6O4, the asymmetric unit contains two halves of 1,2-bis(4-pyridyl)ethene (bpe) molecules and one benzene-1,3-dicarboxylic acid (1,3-H2BDC) molecule. These bpe and 1,3-H2BDC molecules are linked by classical O—H⋯N hydrogen bonds, forming an extended one-dimensional zigzag chain. Each chain is further linked with neighboring ones by π–π interactions between the pyridine and aromatic rings [centroid–centroid distances = 3.9306 (15) Å] and the pyridine rings of pairs of symmetry-related molecules [centroid–centroid distances = 3.5751 (15), 3.7350 (15) and 3.6882 (15) Å], with the formation of a three-dimensional supramolecular framework.
Related literature
For structures and properties of self-assembled supramolecular compounds, see: Lehn (1990 ▶). For hydrogen-bonding interactions and π–π interactions in supramolecular compounds, see: Biradha (2003 ▶); Shan & Jones (2003 ▶); Weyna et al. (2009 ▶).
Experimental
Crystal data
C12H10N2·C8H6O4
M r = 348.35
Triclinic,
a = 6.8331 (14) Å
b = 6.8804 (14) Å
c = 18.618 (4) Å
α = 99.47 (3)°
β = 93.87 (3)°
γ = 102.69 (3)°
V = 837.4 (3) Å3
Z = 2
Mo Kα radiation
μ = 0.10 mm−1
T = 223 K
0.40 × 0.40 × 0.35 mm
Data collection
Rigaku Mercury CCD diffractometer
Absorption correction: multi-scan (REQAB; Jacobson, 1998 ▶) T min = 0.962, T max = 0.967
8280 measured reflections
3054 independent reflections
2153 reflections with I > 2σ(I)
R int = 0.037
Refinement
R[F 2 > 2σ(F 2)] = 0.051
wR(F 2) = 0.137
S = 1.06
3054 reflections
238 parameters
H-atom parameters constrained
Δρmax = 0.23 e Å−3
Δρmin = −0.19 e Å−3
Data collection: CrystalClear (Rigaku, 2001 ▶); cell refinement: CrystalClear; data reduction: CrystalStructure (Rigaku/MSC, 2004 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶).
Supplementary Material
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811043418/rk2306sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811043418/rk2306Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811043418/rk2306Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O1—H1⋯N1i | 0.83 | 1.77 | 2.597 (2) | 176 |
| O3—H3⋯N2 | 0.83 | 1.79 | 2.618 (2) | 176 |
Symmetry code: (i)
.
Acknowledgments
This work was supported by the Research Start-Up Fund for New Staff of Huaibei Normal University (grant No. 600581).
supplementary crystallographic information
Comment
In the past decades, the supramolecular synthesis of multicomponent organic materials has attracted considerable attention due to their functional properties (Lehn, 1990). The facile way of synthesizing these co-crystals is to employ the components containing complementary functional groups such as pyridine and carboxylic acid. Owing to the hydrogen-bonds and π–π stacking between these types of groups, several multicomponent cocrystals containing various network geometries were prepared using these two functional groups (Biradha, 2003; Shan & Jones, 2003; Weyna et al., 2009).
The hydrothermal reaction of 1,2-bis(4-pyridyl)ethene (bpe) with benzene-1,3-dicarboxylic acid (1,3-H2BDC) resulted in the cocrystals of C12H10N2.C8H6O4, I. In I, the asymmetric unit is formed by two halves of bpe molecules and one 1,3-H2BDC molecule (Fig. 1). These molecular units are linked by classical O–H···N hydrogen-bonds (O1–H1···N1iii, O1···N1iii = 2.597 (2)Å; O3–H3···N2, O3···N2 = 2.618 (2)Å) forming an extended one-dimensional zigzag chain (Table 1, Fig. 2). Furthermore, the adjacent one-dimensional chains are interconnected each other through π–π interactions between pairs of molecules [Cg1···Cg1iv = 3.5751 (15)Å; Cg1···Cg3 = 3.9306 (15)Å; Cg2···Cg2v = 3.7350 (15)Å; Cg2···Cg2vi = 3.7350 (15)Å form a three-dimensional framework (Fig. 3). The Cg1, Cg2 and Cg3, are the centroids of the rings N1/C9-C13, N2/C15-C19 and C1-C6. Symmetry codes: (iii) -x+1, y, z; (iv) -x+1, -y+1, -z+2; (v) -x+1, -y+1, -z+1; (vi) -x+2, -y+1, -z+1 .
Experimental
To a 10 mL Pyrex glass tube was loaded 1,2-bis(4-pyridyl)ethene (18 mg, 0.1 mmol), benzene-1,3-dicarboxylic acid (17 mg, 0.1 mmol) and 3 ml of H2O. The tube was sealed and heated in an oven to 423 K for three days, and then cooled to ambient temperature at the rate of 5 K h-1 to form yellow crystals.
Refinement
All H atoms were placed in geometrically idealized positions (C–H = 0.94Å for phenyl, pyridyl and vinyl groups, O–H = 0.83Å for OH group) and constrained to ride on their parent atoms with Uiso(H) = 1.2Ueq(C) and Uiso(H) = 1.5Ueq(O).
Figures
Fig. 1.
The structure of the title compound, showing the atom-numbering scheme. Displacement ellipsoids are presented at the 30% probability level. Symmetry codes: (i) -x+2, -y+2, -z+1; (ii): -x, -y+1, -z+2; (iii) x+1, y, z.
Fig. 2.
The one-dimensional zigzag chain linked by hydrogen-bonding interactions. The blue dashed lines represent the hydrogen-bonds.
Fig. 3.
The three-dimensional supramolecular framework linked by hydrogen-bonding interactions and π–π interactions. The blue and cyan dashed lines represent the hydrogen-bonds and π–π interactions, respectively.
Crystal data
| C12H10N2·C8H6O4 | Z = 2 |
| Mr = 348.35 | F(000) = 364 |
| Triclinic, P1 | Dx = 1.382 Mg m−3 |
| Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
| a = 6.8331 (14) Å | Cell parameters from 2779 reflections |
| b = 6.8804 (14) Å | θ = 3.1–25.4° |
| c = 18.618 (4) Å | µ = 0.10 mm−1 |
| α = 99.47 (3)° | T = 223 K |
| β = 93.87 (3)° | Block, yellow |
| γ = 102.69 (3)° | 0.40 × 0.40 × 0.35 mm |
| V = 837.4 (3) Å3 |
Data collection
| Rigaku Mercury CCD diffractometer | 3054 independent reflections |
| Radiation source: fine-focus sealed tube | 2153 reflections with I > 2σ(I) |
| graphite | Rint = 0.037 |
| φ and ω scans | θmax = 25.3°, θmin = 3.1° |
| Absorption correction: multi-scan (REQAB; Jacobson, 1998) | h = −8→8 |
| Tmin = 0.962, Tmax = 0.967 | k = −7→8 |
| 8280 measured reflections | l = −22→21 |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.051 | H-atom parameters constrained |
| wR(F2) = 0.137 | w = 1/[σ2(Fo2) + (0.0616P)2 + 0.1982P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.06 | (Δ/σ)max < 0.001 |
| 3054 reflections | Δρmax = 0.23 e Å−3 |
| 238 parameters | Δρmin = −0.19 e Å−3 |
| 0 restraints | Extinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.028 (4) |
Special details
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| O1 | −0.1898 (3) | 0.1743 (2) | 0.81468 (9) | 0.0437 (5) | |
| H1 | −0.2835 | 0.1999 | 0.8378 | 0.065* | |
| O2 | −0.2446 (3) | −0.0994 (3) | 0.86694 (10) | 0.0528 (5) | |
| O3 | 0.5207 (2) | 0.0878 (2) | 0.62885 (9) | 0.0417 (4) | |
| H3 | 0.5796 | 0.1779 | 0.6079 | 0.063* | |
| O4 | 0.4236 (3) | 0.3460 (2) | 0.69323 (9) | 0.0495 (5) | |
| N1 | 0.5203 (3) | 0.2721 (3) | 0.88516 (10) | 0.0348 (5) | |
| N2 | 0.6910 (3) | 0.3812 (3) | 0.56392 (10) | 0.0353 (5) | |
| C1 | 0.0121 (3) | −0.0583 (3) | 0.78717 (11) | 0.0306 (5) | |
| C2 | 0.1342 (3) | 0.0735 (3) | 0.75112 (11) | 0.0292 (5) | |
| H2 | 0.1109 | 0.2030 | 0.7507 | 0.035* | |
| C3 | 0.2909 (3) | 0.0166 (3) | 0.71557 (11) | 0.0283 (5) | |
| C4 | 0.3240 (3) | −0.1741 (3) | 0.71652 (11) | 0.0346 (5) | |
| H4 | 0.4293 | −0.2141 | 0.6925 | 0.041* | |
| C5 | 0.2028 (4) | −0.3062 (3) | 0.75262 (12) | 0.0403 (6) | |
| H5 | 0.2260 | −0.4357 | 0.7530 | 0.048* | |
| C6 | 0.0478 (4) | −0.2489 (3) | 0.78806 (12) | 0.0369 (6) | |
| H6 | −0.0337 | −0.3389 | 0.8128 | 0.044* | |
| C7 | −0.1539 (3) | 0.0031 (3) | 0.82700 (12) | 0.0347 (5) | |
| C8 | 0.4193 (3) | 0.1663 (3) | 0.67866 (11) | 0.0327 (5) | |
| C9 | 0.4644 (3) | 0.4451 (4) | 0.88158 (12) | 0.0380 (6) | |
| H9 | 0.5339 | 0.5335 | 0.8533 | 0.046* | |
| C10 | 0.3099 (3) | 0.4988 (3) | 0.91739 (12) | 0.0372 (6) | |
| H10 | 0.2752 | 0.6216 | 0.9132 | 0.045* | |
| C11 | 0.2046 (3) | 0.3725 (3) | 0.95979 (11) | 0.0334 (5) | |
| C12 | 0.2643 (3) | 0.1941 (4) | 0.96377 (12) | 0.0390 (6) | |
| H12 | 0.1989 | 0.1041 | 0.9923 | 0.047* | |
| C13 | 0.4199 (3) | 0.1495 (4) | 0.92569 (12) | 0.0379 (6) | |
| H13 | 0.4568 | 0.0270 | 0.9284 | 0.046* | |
| C14 | 0.0399 (3) | 0.4214 (4) | 1.00081 (13) | 0.0391 (6) | |
| H14 | −0.0139 | 0.3314 | 1.0313 | 0.047* | |
| C15 | 0.7001 (3) | 0.3777 (3) | 0.49225 (12) | 0.0342 (5) | |
| H15 | 0.6506 | 0.2538 | 0.4597 | 0.041* | |
| C16 | 0.7789 (3) | 0.5474 (3) | 0.46388 (12) | 0.0332 (5) | |
| H16 | 0.7805 | 0.5380 | 0.4130 | 0.040* | |
| C17 | 0.8558 (3) | 0.7326 (3) | 0.51039 (12) | 0.0324 (5) | |
| C18 | 0.8411 (3) | 0.7367 (4) | 0.58473 (12) | 0.0383 (6) | |
| H18 | 0.8865 | 0.8590 | 0.6184 | 0.046* | |
| C19 | 0.7600 (3) | 0.5615 (4) | 0.60859 (12) | 0.0404 (6) | |
| H19 | 0.7522 | 0.5677 | 0.6591 | 0.049* | |
| C20 | 0.9500 (3) | 0.9104 (3) | 0.48071 (12) | 0.0353 (5) | |
| H20 | 0.9390 | 0.8969 | 0.4294 | 0.042* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0436 (11) | 0.0443 (10) | 0.0532 (10) | 0.0215 (8) | 0.0243 (8) | 0.0151 (8) |
| O2 | 0.0570 (12) | 0.0512 (11) | 0.0617 (11) | 0.0181 (9) | 0.0331 (9) | 0.0247 (9) |
| O3 | 0.0466 (11) | 0.0339 (9) | 0.0481 (10) | 0.0108 (8) | 0.0249 (8) | 0.0073 (8) |
| O4 | 0.0646 (12) | 0.0296 (10) | 0.0625 (11) | 0.0167 (8) | 0.0341 (9) | 0.0129 (8) |
| N1 | 0.0284 (11) | 0.0395 (11) | 0.0360 (10) | 0.0086 (9) | 0.0060 (8) | 0.0037 (9) |
| N2 | 0.0294 (11) | 0.0360 (11) | 0.0406 (11) | 0.0080 (8) | 0.0077 (8) | 0.0058 (9) |
| C1 | 0.0326 (12) | 0.0319 (12) | 0.0271 (11) | 0.0088 (10) | 0.0034 (9) | 0.0033 (9) |
| C2 | 0.0339 (13) | 0.0262 (11) | 0.0285 (11) | 0.0099 (10) | 0.0037 (9) | 0.0038 (9) |
| C3 | 0.0305 (12) | 0.0267 (11) | 0.0278 (11) | 0.0087 (9) | 0.0033 (9) | 0.0024 (9) |
| C4 | 0.0389 (14) | 0.0348 (13) | 0.0330 (12) | 0.0150 (11) | 0.0077 (10) | 0.0049 (10) |
| C5 | 0.0506 (16) | 0.0309 (13) | 0.0443 (14) | 0.0174 (12) | 0.0113 (11) | 0.0074 (11) |
| C6 | 0.0436 (15) | 0.0317 (12) | 0.0378 (13) | 0.0094 (11) | 0.0097 (10) | 0.0103 (10) |
| C7 | 0.0343 (13) | 0.0349 (13) | 0.0348 (12) | 0.0085 (11) | 0.0055 (10) | 0.0049 (10) |
| C8 | 0.0341 (13) | 0.0335 (13) | 0.0324 (12) | 0.0127 (10) | 0.0082 (9) | 0.0035 (10) |
| C9 | 0.0341 (13) | 0.0397 (14) | 0.0416 (13) | 0.0083 (11) | 0.0118 (10) | 0.0091 (11) |
| C10 | 0.0361 (14) | 0.0354 (13) | 0.0423 (13) | 0.0121 (11) | 0.0096 (10) | 0.0060 (11) |
| C11 | 0.0289 (12) | 0.0397 (13) | 0.0293 (11) | 0.0080 (10) | 0.0022 (9) | 0.0003 (10) |
| C12 | 0.0383 (14) | 0.0419 (14) | 0.0396 (13) | 0.0112 (11) | 0.0115 (10) | 0.0103 (11) |
| C13 | 0.0353 (14) | 0.0399 (13) | 0.0413 (13) | 0.0149 (11) | 0.0059 (10) | 0.0063 (11) |
| C14 | 0.0341 (13) | 0.0451 (14) | 0.0398 (12) | 0.0111 (11) | 0.0133 (10) | 0.0067 (11) |
| C15 | 0.0281 (12) | 0.0332 (13) | 0.0408 (13) | 0.0094 (10) | 0.0055 (9) | 0.0018 (10) |
| C16 | 0.0299 (12) | 0.0346 (13) | 0.0356 (12) | 0.0105 (10) | 0.0035 (9) | 0.0037 (10) |
| C17 | 0.0246 (12) | 0.0319 (12) | 0.0394 (12) | 0.0067 (10) | 0.0016 (9) | 0.0037 (10) |
| C18 | 0.0349 (13) | 0.0347 (13) | 0.0385 (13) | 0.0006 (11) | 0.0038 (10) | −0.0021 (11) |
| C19 | 0.0360 (14) | 0.0473 (15) | 0.0344 (12) | 0.0041 (11) | 0.0074 (10) | 0.0036 (11) |
| C20 | 0.0332 (13) | 0.0345 (12) | 0.0387 (13) | 0.0082 (10) | 0.0028 (10) | 0.0083 (10) |
Geometric parameters (Å, °)
| O1—C7 | 1.307 (3) | C9—C10 | 1.371 (3) |
| O1—H1 | 0.8300 | C9—H9 | 0.9400 |
| O2—C7 | 1.215 (3) | C10—C11 | 1.387 (3) |
| O3—C8 | 1.310 (2) | C10—H10 | 0.9400 |
| O3—H3 | 0.8300 | C11—C12 | 1.387 (3) |
| O4—C8 | 1.215 (3) | C11—C14 | 1.470 (3) |
| N1—C13 | 1.333 (3) | C12—C13 | 1.378 (3) |
| N1—C9 | 1.338 (3) | C12—H12 | 0.9400 |
| N2—C15 | 1.336 (3) | C13—H13 | 0.9400 |
| N2—C19 | 1.343 (3) | C14—C14i | 1.318 (5) |
| C1—C2 | 1.383 (3) | C14—H14 | 0.9400 |
| C1—C6 | 1.387 (3) | C15—C16 | 1.378 (3) |
| C1—C7 | 1.495 (3) | C15—H15 | 0.9400 |
| C2—C3 | 1.390 (3) | C16—C17 | 1.390 (3) |
| C2—H2 | 0.9400 | C16—H16 | 0.9400 |
| C3—C4 | 1.383 (3) | C17—C18 | 1.390 (3) |
| C3—C8 | 1.490 (3) | C17—C20 | 1.463 (3) |
| C4—C5 | 1.382 (3) | C18—C19 | 1.369 (3) |
| C4—H4 | 0.9400 | C18—H18 | 0.9400 |
| C5—C6 | 1.381 (3) | C19—H19 | 0.9400 |
| C5—H5 | 0.9400 | C20—C20ii | 1.333 (4) |
| C6—H6 | 0.9400 | C20—H20 | 0.9400 |
| C7—O1—H1 | 109.5 | C9—C10—H10 | 119.9 |
| C8—O3—H3 | 109.5 | C11—C10—H10 | 119.9 |
| C13—N1—C9 | 117.51 (19) | C10—C11—C12 | 116.8 (2) |
| C15—N2—C19 | 116.9 (2) | C10—C11—C14 | 123.4 (2) |
| C2—C1—C6 | 119.4 (2) | C12—C11—C14 | 119.8 (2) |
| C2—C1—C7 | 121.13 (19) | C13—C12—C11 | 119.7 (2) |
| C6—C1—C7 | 119.4 (2) | C13—C12—H12 | 120.2 |
| C1—C2—C3 | 120.74 (19) | C11—C12—H12 | 120.2 |
| C1—C2—H2 | 119.6 | N1—C13—C12 | 123.1 (2) |
| C3—C2—H2 | 119.6 | N1—C13—H13 | 118.5 |
| C4—C3—C2 | 119.2 (2) | C12—C13—H13 | 118.5 |
| C4—C3—C8 | 122.45 (19) | C14i—C14—C11 | 126.6 (3) |
| C2—C3—C8 | 118.30 (18) | C14i—C14—H14 | 116.7 |
| C5—C4—C3 | 120.3 (2) | C11—C14—H14 | 116.7 |
| C5—C4—H4 | 119.9 | N2—C15—C16 | 123.0 (2) |
| C3—C4—H4 | 119.9 | N2—C15—H15 | 118.5 |
| C6—C5—C4 | 120.3 (2) | C16—C15—H15 | 118.5 |
| C6—C5—H5 | 119.9 | C15—C16—C17 | 120.1 (2) |
| C4—C5—H5 | 119.9 | C15—C16—H16 | 120.0 |
| C5—C6—C1 | 120.1 (2) | C17—C16—H16 | 120.0 |
| C5—C6—H6 | 120.0 | C16—C17—C18 | 116.7 (2) |
| C1—C6—H6 | 120.0 | C16—C17—C20 | 120.1 (2) |
| O2—C7—O1 | 124.3 (2) | C18—C17—C20 | 123.1 (2) |
| O2—C7—C1 | 121.9 (2) | C19—C18—C17 | 119.6 (2) |
| O1—C7—C1 | 113.81 (19) | C19—C18—H18 | 120.2 |
| O4—C8—O3 | 123.6 (2) | C17—C18—H18 | 120.2 |
| O4—C8—C3 | 121.53 (19) | N2—C19—C18 | 123.7 (2) |
| O3—C8—C3 | 114.84 (18) | N2—C19—H19 | 118.2 |
| N1—C9—C10 | 122.7 (2) | C18—C19—H19 | 118.2 |
| N1—C9—H9 | 118.6 | C20ii—C20—C17 | 126.3 (3) |
| C10—C9—H9 | 118.6 | C20ii—C20—H20 | 116.8 |
| C9—C10—C11 | 120.2 (2) | C17—C20—H20 | 116.8 |
Symmetry codes: (i) −x, −y+1, −z+2; (ii) −x+2, −y+2, −z+1.
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1—H1···N1iii | 0.83 | 1.77 | 2.597 (2) | 176. |
| O3—H3···N2 | 0.83 | 1.79 | 2.618 (2) | 176. |
Symmetry codes: (iii) x−1, y, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: RK2306).
References
- Biradha, K. (2003). CrystEngComm, 5, 374–384.
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- Rigaku (2001). CrystalClear Rigaku Corporation, Tokyo, Japan.
- Rigaku/MSC (2004). CrystalStructure Rigaku/MSC, The Woodlands, Texas, USA.
- Shan, N. & Jones, W. (2003). Tetrahedron Lett. 44, 3687–3689.
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811043418/rk2306sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811043418/rk2306Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811043418/rk2306Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report



