Abstract
In the title compound, C16H13NOS, the seven-membered ring adopts a distorted half-chair conformation. In the crystal, molecules are linked by N—H⋯O hydrogen bonds, forming chains running along the b axis. The crystal packing is further stabilized by C—H⋯O interactions.
Related literature
For the pharmaceutical properties of thiazepin derivatives, see: Tomascovic et al. (2000 ▶); Rajsner et al. (1971 ▶); Metys et al. (1965 ▶). For the conformation of thiazepin derivatives, see: Sridevi et al. (2011 ▶).
Experimental
Crystal data
C16H13NOS
M r = 267.33
Orthorhombic,
a = 10.7711 (9) Å
b = 7.8736 (7) Å
c = 31.610 (3) Å
V = 2680.7 (4) Å3
Z = 8
Mo Kα radiation
μ = 0.23 mm−1
T = 293 K
0.2 × 0.2 × 0.2 mm
Data collection
Bruker KappaCCD APEXII diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.980, T max = 0.990
13085 measured reflections
3306 independent reflections
2643 reflections with I > 2σ(I)
R int = 0.028
Refinement
R[F 2 > 2σ(F 2)] = 0.039
wR(F 2) = 0.112
S = 1.04
3306 reflections
180 parameters
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.35 e Å−3
Δρmin = −0.22 e Å−3
Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶).
Supplementary Material
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811042991/bt5678sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811042991/bt5678Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811042991/bt5678Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N—H⋯Oi | 0.872 (18) | 1.996 (18) | 2.8480 (16) | 165.4 (16) |
| C14—H14⋯Oii | 0.93 | 2.57 | 3.485 (2) | 167 |
| C16—H16⋯O | 0.93 | 2.60 | 3.397 (2) | 144 |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
SA thanks the UGC, India, for financial support.
supplementary crystallographic information
Comment
The title compound is used as an intermediate for the synthesis of dosulepin, which is an antidepressant of the tricyclic family. Dosulepin prevents reabsorbing of serotonin and noradrenaline in the brain, helps to prolong the mood lightening effect of any released noradrenaline and serotonin, thus relieving depression. The dibenzo[c,e]thiazepin derivatives exhibit chiroptical properties (Tomascovic et al., 2000). Dibenzo[b,e]thiazepin-5,5-dioxide derivatives possess antihistaminic and antiallergenic activities (Rajsner et al., 1971). Benzene thiazepin derivatives are identified as a new type of effective antihistaminic compounds (Metys et al., 1965). Considering the wide range of biological activities of the thiazepin derivatives, we determined the crystal structure of the title compound. The seven membered thiazepin ring adopts a distorted half-chair conformation (Sridevi et al., 2011). Crystal structure and crystal packing of the molecule were stabilized by intra (C16—H16···O) and Inter (N—H···O, C14—H14···O) molecular interaction.
Experimental
A mixture of (z)-methyl2-(bromomethyl)-3-phenylacrylate (2 mmol) and O-aminothiophenol(2 mmol) in the presence of potassium tert-butoxide (2,4 mmol) in dry THF (10 ml) was stirred at room temperature for 1 h. After the completion of the reaction as indicated by TLC, the reaction mixture was concentrated and the resulting crude mass was diluted with water (20 ml) and extracted with ethyl acetate (3X20ml). The organic layer was washed with brine (2X20ml) and dried over anhydrous sodium sulfate. The organic layer was concentrated, which provided a crude mass (Z)-methyl 2-((2-aminnophyenylthio)methyl)-3-phenylacrylate.The crude product was treated with a catalytic amount of p-toluene sulphonic acid (0.4 mmol),in p-xylene(10 ml), under reflux conditions for 12 h. After the completion of the reaction as indicated by TLC, the reaction mixture was concentrated under reduced pressure and worked up as mentioned previously, which successfully provide the crude final product. The final product was purified by column chromatography on silica gel to afford the title compound in good yield(71%).
Refinement
H atoms (except H10 and the amino H atom which were freely refined) were refined with fixed individual displacement parameters [U(H) = 1.2 Ueq(C)] using a riding model with C-H ranging from 0.93Å to 0.97Å.
Figures
Fig. 1.
The molecular structure of the title compound, showing 30% probability displacement ellipsoids for non-H atoms. H atoms have been omitted for clarity.
Fig. 2.
A view of the crystal packing H atoms not involved in hydrogen bonding (dashed lines) have been omitted for clarity.
Crystal data
| C16H13NOS | F(000) = 1120 |
| Mr = 267.33 | Dx = 1.325 Mg m−3 |
| Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ac 2ab | Cell parameters from 8725 reflections |
| a = 10.7711 (9) Å | θ = 2.8–29.1° |
| b = 7.8736 (7) Å | µ = 0.23 mm−1 |
| c = 31.610 (3) Å | T = 293 K |
| V = 2680.7 (4) Å3 | Orthorhombic, colourless |
| Z = 8 | 0.2 × 0.2 × 0.2 mm |
Data collection
| Bruker KappaCCD APEXII diffractometer | 3306 independent reflections |
| Radiation source: fine-focus sealed tube | 2643 reflections with I > 2σ(I) |
| graphite | Rint = 0.028 |
| Detector resolution: 15.9948 pixels mm-1 | θmax = 28.3°, θmin = 1.3° |
| ω scans | h = −14→7 |
| Absorption correction: multi-scan (APEX2; Bruker, 2004) | k = −5→10 |
| Tmin = 0.980, Tmax = 0.990 | l = −23→42 |
| 13085 measured reflections |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.112 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.04 | w = 1/[σ2(Fo2) + (0.0544P)2 + 0.6524P] where P = (Fo2 + 2Fc2)/3 |
| 3306 reflections | (Δ/σ)max = 0.002 |
| 180 parameters | Δρmax = 0.35 e Å−3 |
| 0 restraints | Δρmin = −0.22 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| H10 | 1.0606 (16) | −0.099 (2) | 0.6162 (5) | 0.048 (5)* | |
| H | 0.8379 (16) | 0.440 (2) | 0.6294 (5) | 0.042 (4)* | |
| S | 0.90221 (4) | 0.20135 (6) | 0.529568 (12) | 0.04764 (14) | |
| O | 0.73812 (10) | 0.16660 (13) | 0.64118 (3) | 0.0435 (3) | |
| N | 0.88207 (11) | 0.35628 (15) | 0.61960 (4) | 0.0351 (3) | |
| C8 | 0.90106 (16) | 0.01129 (19) | 0.56317 (5) | 0.0461 (4) | |
| H8A | 0.8216 | −0.0458 | 0.5605 | 0.055* | |
| H8B | 0.9653 | −0.0665 | 0.5538 | 0.055* | |
| C7 | 0.92280 (14) | 0.05759 (17) | 0.60855 (4) | 0.0359 (3) | |
| C6 | 0.83940 (13) | 0.19642 (17) | 0.62461 (4) | 0.0333 (3) | |
| C1 | 1.11685 (15) | 0.3856 (2) | 0.53349 (5) | 0.0445 (4) | |
| H1 | 1.1331 | 0.3404 | 0.5069 | 0.053* | |
| C5 | 0.98953 (13) | 0.39991 (16) | 0.59611 (4) | 0.0332 (3) | |
| C2 | 1.19757 (16) | 0.5031 (2) | 0.55064 (6) | 0.0494 (4) | |
| H2 | 1.2669 | 0.5381 | 0.5354 | 0.059* | |
| C4 | 1.07215 (15) | 0.51731 (19) | 0.61325 (5) | 0.0432 (4) | |
| H4 | 1.0580 | 0.5614 | 0.6401 | 0.052* | |
| C9 | 1.01129 (14) | 0.33387 (17) | 0.55554 (4) | 0.0359 (3) | |
| C16 | 0.98687 (17) | 0.1038 (2) | 0.70536 (5) | 0.0515 (4) | |
| H16 | 0.9123 | 0.1553 | 0.6980 | 0.062* | |
| C11 | 1.05193 (15) | 0.01041 (19) | 0.67530 (5) | 0.0412 (3) | |
| C3 | 1.17543 (16) | 0.5686 (2) | 0.59035 (6) | 0.0494 (4) | |
| H3 | 1.2300 | 0.6476 | 0.6019 | 0.059* | |
| C13 | 1.2089 (2) | −0.0450 (3) | 0.72861 (7) | 0.0690 (6) | |
| H13 | 1.2840 | −0.0947 | 0.7362 | 0.083* | |
| C14 | 1.1430 (2) | 0.0472 (3) | 0.75774 (7) | 0.0667 (6) | |
| H14 | 1.1730 | 0.0599 | 0.7851 | 0.080* | |
| C10 | 1.01213 (15) | −0.01630 (18) | 0.63123 (5) | 0.0400 (3) | |
| C12 | 1.16375 (17) | −0.0644 (2) | 0.68770 (6) | 0.0555 (4) | |
| H12 | 1.2087 | −0.1283 | 0.6683 | 0.067* | |
| C15 | 1.0318 (2) | 0.1210 (3) | 0.74614 (6) | 0.0626 (5) | |
| H15 | 0.9867 | 0.1830 | 0.7659 | 0.075* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| S | 0.0540 (3) | 0.0560 (3) | 0.0329 (2) | −0.00587 (19) | −0.00722 (17) | −0.00413 (17) |
| O | 0.0376 (6) | 0.0446 (6) | 0.0483 (6) | −0.0052 (5) | 0.0072 (5) | −0.0052 (5) |
| N | 0.0361 (7) | 0.0308 (6) | 0.0385 (6) | 0.0026 (5) | 0.0060 (5) | −0.0043 (5) |
| C8 | 0.0582 (10) | 0.0399 (8) | 0.0403 (8) | −0.0077 (7) | 0.0035 (7) | −0.0108 (6) |
| C7 | 0.0417 (8) | 0.0298 (6) | 0.0361 (7) | −0.0036 (6) | 0.0064 (6) | −0.0030 (5) |
| C6 | 0.0345 (7) | 0.0355 (7) | 0.0299 (6) | −0.0014 (6) | −0.0017 (5) | −0.0031 (5) |
| C1 | 0.0500 (9) | 0.0433 (8) | 0.0401 (8) | 0.0036 (7) | 0.0095 (7) | 0.0038 (7) |
| C5 | 0.0341 (7) | 0.0283 (6) | 0.0372 (7) | 0.0031 (5) | 0.0010 (6) | 0.0020 (5) |
| C2 | 0.0441 (9) | 0.0434 (8) | 0.0607 (10) | −0.0010 (7) | 0.0135 (8) | 0.0078 (7) |
| C4 | 0.0464 (9) | 0.0358 (7) | 0.0472 (9) | −0.0032 (7) | 0.0022 (7) | −0.0056 (6) |
| C9 | 0.0388 (8) | 0.0343 (7) | 0.0345 (7) | 0.0022 (6) | −0.0006 (6) | 0.0018 (5) |
| C16 | 0.0490 (10) | 0.0629 (10) | 0.0425 (9) | 0.0091 (8) | −0.0011 (7) | −0.0004 (8) |
| C11 | 0.0413 (8) | 0.0367 (7) | 0.0457 (8) | 0.0010 (6) | 0.0020 (7) | 0.0063 (6) |
| C3 | 0.0447 (9) | 0.0383 (8) | 0.0652 (11) | −0.0079 (7) | 0.0023 (8) | −0.0021 (7) |
| C13 | 0.0549 (11) | 0.0700 (13) | 0.0821 (14) | 0.0031 (10) | −0.0195 (10) | 0.0156 (11) |
| C14 | 0.0707 (13) | 0.0733 (13) | 0.0561 (11) | −0.0123 (11) | −0.0206 (10) | 0.0097 (10) |
| C10 | 0.0448 (9) | 0.0311 (7) | 0.0442 (8) | 0.0034 (6) | 0.0101 (7) | −0.0017 (6) |
| C12 | 0.0491 (10) | 0.0524 (10) | 0.0649 (11) | 0.0090 (8) | 0.0010 (8) | 0.0075 (8) |
| C15 | 0.0678 (13) | 0.0746 (12) | 0.0454 (9) | 0.0002 (10) | −0.0033 (9) | −0.0049 (9) |
Geometric parameters (Å, °)
| S—C9 | 1.7728 (15) | C2—H2 | 0.9300 |
| S—C8 | 1.8352 (17) | C4—C3 | 1.387 (2) |
| O—C6 | 1.2326 (17) | C4—H4 | 0.9300 |
| N—C6 | 1.3493 (18) | C16—C15 | 1.384 (2) |
| N—C5 | 1.4174 (18) | C16—C11 | 1.391 (2) |
| N—H | 0.872 (18) | C16—H16 | 0.9300 |
| C8—C7 | 1.498 (2) | C11—C12 | 1.397 (2) |
| C8—H8A | 0.9700 | C11—C10 | 1.473 (2) |
| C8—H8B | 0.9700 | C3—H3 | 0.9300 |
| C7—C10 | 1.334 (2) | C13—C14 | 1.371 (3) |
| C7—C6 | 1.503 (2) | C13—C12 | 1.390 (3) |
| C6—O | 1.2326 (17) | C13—H13 | 0.9300 |
| C1—C2 | 1.381 (2) | C14—C15 | 1.381 (3) |
| C1—C9 | 1.394 (2) | C14—H14 | 0.9300 |
| C1—H1 | 0.9300 | C10—H10 | 0.962 (18) |
| C5—C4 | 1.393 (2) | C12—H12 | 0.9300 |
| C5—C9 | 1.4037 (19) | C15—H15 | 0.9300 |
| C2—C3 | 1.378 (2) | ||
| C9—S—C8 | 102.50 (7) | C5—C4—H4 | 119.9 |
| C6—N—C5 | 124.46 (12) | C1—C9—C5 | 118.98 (14) |
| C6—N—H | 118.7 (11) | C1—C9—S | 118.75 (12) |
| C5—N—H | 116.6 (11) | C5—C9—S | 122.04 (11) |
| C7—C8—S | 110.78 (10) | C15—C16—C11 | 120.80 (17) |
| C7—C8—H8A | 109.5 | C15—C16—H16 | 119.6 |
| S—C8—H8A | 109.5 | C11—C16—H16 | 119.6 |
| C7—C8—H8B | 109.5 | C16—C11—C12 | 117.75 (16) |
| S—C8—H8B | 109.5 | C16—C11—C10 | 125.11 (15) |
| H8A—C8—H8B | 108.1 | C12—C11—C10 | 117.14 (15) |
| C10—C7—C8 | 121.42 (14) | C2—C3—C4 | 120.34 (16) |
| C10—C7—C6 | 124.53 (13) | C2—C3—H3 | 119.8 |
| C8—C7—C6 | 114.01 (13) | C4—C3—H3 | 119.8 |
| O—C6—N | 121.94 (13) | C14—C13—C12 | 120.12 (19) |
| O—C6—N | 121.94 (13) | C14—C13—H13 | 119.9 |
| O—C6—C7 | 122.26 (13) | C12—C13—H13 | 119.9 |
| O—C6—C7 | 122.26 (13) | C13—C14—C15 | 119.60 (19) |
| N—C6—C7 | 115.79 (12) | C13—C14—H14 | 120.2 |
| C2—C1—C9 | 120.89 (15) | C15—C14—H14 | 120.2 |
| C2—C1—H1 | 119.6 | C7—C10—C11 | 131.02 (14) |
| C9—C1—H1 | 119.6 | C7—C10—H10 | 115.1 (11) |
| C4—C5—C9 | 119.65 (13) | C11—C10—H10 | 113.9 (11) |
| C4—C5—N | 118.61 (13) | C13—C12—C11 | 121.10 (18) |
| C9—C5—N | 121.68 (13) | C13—C12—H12 | 119.5 |
| C3—C2—C1 | 119.96 (15) | C11—C12—H12 | 119.5 |
| C3—C2—H2 | 120.0 | C14—C15—C16 | 120.63 (19) |
| C1—C2—H2 | 120.0 | C14—C15—H15 | 119.7 |
| C3—C4—C5 | 120.17 (15) | C16—C15—H15 | 119.7 |
| C3—C4—H4 | 119.9 | ||
| C9—S—C8—C7 | 32.87 (13) | C4—C5—C9—C1 | 1.0 (2) |
| S—C8—C7—C10 | −126.73 (14) | N—C5—C9—C1 | 178.07 (13) |
| S—C8—C7—C6 | 50.98 (16) | C4—C5—C9—S | −173.34 (11) |
| O—O—C6—N | 0.0 (4) | N—C5—C9—S | 3.70 (19) |
| O—O—C6—C7 | 0.0 (3) | C8—S—C9—C1 | 120.08 (13) |
| C5—N—C6—O | −171.54 (13) | C8—S—C9—C5 | −65.54 (13) |
| C5—N—C6—O | −171.54 (13) | C15—C16—C11—C12 | −0.2 (3) |
| C5—N—C6—C7 | 8.2 (2) | C15—C16—C11—C10 | 179.74 (17) |
| C10—C7—C6—O | −92.01 (19) | C1—C2—C3—C4 | −0.1 (3) |
| C8—C7—C6—O | 90.37 (16) | C5—C4—C3—C2 | −0.4 (3) |
| C10—C7—C6—O | −92.01 (19) | C12—C13—C14—C15 | −0.2 (3) |
| C8—C7—C6—O | 90.37 (16) | C8—C7—C10—C11 | 178.60 (15) |
| C10—C7—C6—N | 88.27 (18) | C6—C7—C10—C11 | 1.1 (3) |
| C8—C7—C6—N | −89.35 (16) | C16—C11—C10—C7 | 11.7 (3) |
| C6—N—C5—C4 | −135.93 (15) | C12—C11—C10—C7 | −168.36 (17) |
| C6—N—C5—C9 | 47.0 (2) | C14—C13—C12—C11 | 0.7 (3) |
| C9—C1—C2—C3 | 1.1 (2) | C16—C11—C12—C13 | −0.5 (3) |
| C9—C5—C4—C3 | 0.0 (2) | C10—C11—C12—C13 | 179.57 (17) |
| N—C5—C4—C3 | −177.16 (14) | C13—C14—C15—C16 | −0.4 (3) |
| C2—C1—C9—C5 | −1.6 (2) | C11—C16—C15—C14 | 0.6 (3) |
| C2—C1—C9—S | 172.96 (12) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N—H···Oi | 0.872 (18) | 1.996 (18) | 2.8480 (16) | 165.4 (16) |
| C14—H14···Oii | 0.93 | 2.57 | 3.485 (2) | 167. |
| C16—H16···O | 0.93 | 2.60 | 3.397 (2) | 144. |
Symmetry codes: (i) −x+3/2, y+1/2, z; (ii) x+1/2, y, −z+3/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BT5678).
References
- Bruker (2004). APEX2, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
- Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
- Metys, J., Metysova, J. & Votava, Z. (1965). Acta Biol. Med. Ger. 15, 871–873. [PubMed]
- Rajsner, M., Protiva, M. & Metysova, J. (1971). Czech. Patent Appl. CS 143737.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]
- Sridevi, D., Bhaskaran, S., Usha, G., Murugan, G. & Bakthadoss, M. (2011). Acta Cryst. E67, o243. [DOI] [PMC free article] [PubMed]
- Tomascovic, L. L., Arneri, R. S., Brundic, A. H., Nagl, A., Mintas, M. & Sandtrom, J. (2000). Helv. Chim. Acta, 83, 479–493.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811042991/bt5678sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811042991/bt5678Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811042991/bt5678Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


