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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Oct 29;67(Pt 11):o3077. doi: 10.1107/S1600536811044047

2-(4-Methyl­phen­oxy)-5-nitro­pyridine

Shah Bakhtiar Nasir a, Zainal Abidin Fairuz a, Zanariah Abdullah a,, Seik Weng Ng a,b, Edward R T Tiekink a,*
PMCID: PMC3247466  PMID: 22220084

Abstract

The title mol­ecule, C12H10N2O3, is twisted, the dihedral angle between the rings being 61.16 (13)°. The nitro group is approximately coplanar with the pyridine ring to which it is attached [O—N—C—C torsion angle = −178.1 (3)°]. Supra­molecular chains along [010] and mediated by C—H⋯O and π–π [centroid(pyrid­yl)–(benzene) distance = 3.8259 (18) Å] contacts feature in the crystal packing.

Related literature

For the structure of a related nitro-pyridine derivative, see: Nasir et al. (2010).graphic file with name e-67-o3077-scheme1.jpg

Experimental

Crystal data

  • C12H10N2O3

  • M r = 230.22

  • Orthorhombic, Inline graphic

  • a = 7.2818 (18) Å

  • b = 11.977 (2) Å

  • c = 25.362 (5) Å

  • V = 2211.9 (8) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 0.10 mm−1

  • T = 293 K

  • 0.20 × 0.18 × 0.07 mm

Data collection

  • Bruker SMART APEX diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.670, T max = 0.746

  • 15887 measured reflections

  • 1951 independent reflections

  • 1089 reflections with I > 2σ(I)

  • R int = 0.074

Refinement

  • R[F 2 > 2σ(F 2)] = 0.047

  • wR(F 2) = 0.147

  • S = 1.02

  • 1951 reflections

  • 156 parameters

  • H-atom parameters constrained

  • Δρmax = 0.15 e Å−3

  • Δρmin = −0.13 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811044047/hg5116sup1.cif

e-67-o3077-sup1.cif (15.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811044047/hg5116Isup2.hkl

e-67-o3077-Isup2.hkl (96.1KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811044047/hg5116Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C5—H5⋯O(3)i 0.93 2.43 3.135 (3) 132

Symmetry code: (i) Inline graphic.

Acknowledgments

We thank the University of Malaya (grant No. RG027/ 09AFR) for supporting this study.

supplementary crystallographic information

Comment

The synthesis and crystal structure determination of the title compound, (I), was determined in connection with studies of related species (Nasir et al., 2010). In (I), the dihedral angle formed between the pyridyl and benzene rings is 61.16 (13)°, indicating significant twisting in the molecule. The nitro group is co-planar with the pyridyl ring to which it is connected as seen in the value of the O2—N2—C4—C3 torsion angle of -178.1 (3)°.

The most prominent features in the crystal packing are the formation of C—H···O, Table 1, and π–π interactions. The latter occur between the pyridyl and benzene rings with the separation between the ring centroids being 3.8259 (18) Å for symmetry operation 3/2 - x, 1/2 + y, z. These interactions lead to supramolecular chains along the b axis, Fig. 2, which pack as shown in Fig. 3.

Experimental

p-Cresol (2.16 g, 20 mmol) and sodium hydroxide (0.80 g, 20 mmol) were dissolved in water (50 ml) and to the solution was added 2-chloro-5-nitropyridine (3.17 g, 20 mmol) dissolved in THF (50 ml). The mixture was heated for 5 h. Water was added and the organic phase extracted with chloroform. The chloroform solution was dried over sodium sulfate; slow evaporation led to the formation of colourless crystals.

Refinement

Hydrogen atoms were placed at calculated positions (C—H 0.93–0.96 Å) and were treated as riding on their parent carbon atoms, with U(H) set to 1.2–1.5Ueq(C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I) showing the atom-labelling scheme and displacement ellipsoids at the 35% probability level.

Fig. 2.

Fig. 2.

Supramolecular chain along [010] in (I) sustained by C—H···O and π–π interactions, shown as orange and purple dashed lines, respectively.

Fig. 3.

Fig. 3.

Unit-cell contents for (I) shown in projection down the b axis highlighting the packing of supramolecular chains.

Crystal data

C12H10N2O3 F(000) = 960
Mr = 230.22 Dx = 1.383 Mg m3
Orthorhombic, Pbca Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2ab Cell parameters from 1038 reflections
a = 7.2818 (18) Å θ = 3.2–19.7°
b = 11.977 (2) Å µ = 0.10 mm1
c = 25.362 (5) Å T = 293 K
V = 2211.9 (8) Å3 Block, colourless
Z = 8 0.20 × 0.18 × 0.07 mm

Data collection

Bruker SMART APEX diffractometer 1951 independent reflections
Radiation source: fine-focus sealed tube 1089 reflections with I > 2σ(I)
graphite Rint = 0.074
ω scans θmax = 25.0°, θmin = 1.6°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −8→8
Tmin = 0.670, Tmax = 0.746 k = −14→14
15887 measured reflections l = −30→30

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.047 H-atom parameters constrained
wR(F2) = 0.147 w = 1/[σ2(Fo2) + (0.0643P)2 + 0.2807P] where P = (Fo2 + 2Fc2)/3
S = 1.02 (Δ/σ)max = 0.001
1951 reflections Δρmax = 0.15 e Å3
156 parameters Δρmin = −0.13 e Å3
0 restraints Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.0060 (13)

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.5542 (3) 0.41426 (14) 0.32750 (7) 0.0725 (6)
O2 0.8217 (3) 0.59307 (19) 0.54024 (9) 0.1039 (8)
O3 0.7135 (4) 0.74378 (19) 0.50863 (8) 0.1135 (9)
N1 0.6779 (3) 0.41528 (17) 0.41124 (9) 0.0699 (7)
N2 0.7486 (4) 0.6456 (2) 0.50490 (10) 0.0758 (7)
C1 0.6005 (4) 0.4707 (2) 0.37191 (11) 0.0595 (7)
C2 0.5682 (3) 0.5841 (2) 0.37215 (10) 0.0613 (7)
H2 0.5145 0.6191 0.3433 0.074*
C3 0.6168 (4) 0.6439 (2) 0.41563 (10) 0.0648 (7)
H3 0.5978 0.7206 0.4173 0.078*
C4 0.6950 (4) 0.5868 (2) 0.45701 (10) 0.0576 (7)
C5 0.7247 (4) 0.4751 (2) 0.45359 (11) 0.0675 (8)
H5 0.7798 0.4389 0.4819 0.081*
C6 0.5381 (4) 0.2976 (2) 0.32825 (10) 0.0588 (7)
C7 0.6205 (4) 0.2394 (2) 0.28825 (9) 0.0625 (7)
H7 0.6943 0.2759 0.2638 0.075*
C8 0.5920 (4) 0.1252 (2) 0.28494 (10) 0.0639 (7)
H8 0.6459 0.0857 0.2574 0.077*
C9 0.4864 (4) 0.0685 (2) 0.32118 (10) 0.0601 (7)
C10 0.4088 (4) 0.1301 (2) 0.36136 (11) 0.0675 (8)
H10 0.3393 0.0936 0.3868 0.081*
C11 0.4313 (4) 0.2442 (2) 0.36485 (10) 0.0685 (8)
H11 0.3747 0.2844 0.3917 0.082*
C12 0.4559 (4) −0.0556 (2) 0.31771 (12) 0.0854 (9)
H12A 0.4765 −0.0888 0.3517 0.128*
H12B 0.5397 −0.0871 0.2926 0.128*
H12C 0.3320 −0.0700 0.3067 0.128*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0976 (16) 0.0589 (12) 0.0612 (11) 0.0000 (10) −0.0111 (11) 0.0016 (9)
O2 0.142 (2) 0.0885 (16) 0.0806 (14) 0.0159 (14) −0.0259 (15) −0.0119 (13)
O3 0.210 (3) 0.0523 (12) 0.0784 (14) −0.0020 (15) 0.0069 (16) −0.0057 (11)
N1 0.0881 (17) 0.0516 (13) 0.0699 (14) 0.0073 (11) −0.0110 (14) −0.0033 (12)
N2 0.104 (2) 0.0597 (16) 0.0639 (15) −0.0023 (14) 0.0124 (14) −0.0004 (13)
C1 0.0622 (17) 0.0557 (16) 0.0607 (16) 0.0015 (13) 0.0020 (14) 0.0036 (14)
C2 0.0640 (18) 0.0586 (17) 0.0615 (16) 0.0076 (13) 0.0040 (14) 0.0104 (14)
C3 0.0754 (19) 0.0496 (15) 0.0695 (17) 0.0059 (14) 0.0120 (16) 0.0042 (14)
C4 0.0645 (17) 0.0508 (16) 0.0574 (15) −0.0002 (13) 0.0085 (14) −0.0002 (13)
C5 0.081 (2) 0.0566 (17) 0.0650 (17) 0.0056 (15) −0.0076 (15) 0.0019 (14)
C6 0.0642 (18) 0.0568 (17) 0.0555 (16) 0.0006 (13) −0.0087 (14) −0.0002 (13)
C7 0.0632 (17) 0.0729 (18) 0.0513 (15) −0.0010 (14) −0.0007 (13) 0.0029 (14)
C8 0.0646 (17) 0.0730 (19) 0.0541 (15) 0.0055 (15) −0.0050 (14) −0.0100 (14)
C9 0.0536 (16) 0.0654 (18) 0.0614 (16) −0.0024 (14) −0.0105 (14) −0.0089 (14)
C10 0.0596 (17) 0.075 (2) 0.0683 (18) −0.0082 (14) 0.0032 (15) 0.0007 (15)
C11 0.0697 (19) 0.0705 (19) 0.0651 (17) 0.0041 (15) 0.0042 (15) −0.0086 (15)
C12 0.088 (2) 0.071 (2) 0.098 (2) −0.0109 (16) −0.0140 (19) −0.0137 (17)

Geometric parameters (Å, °)

O1—C1 1.356 (3) C6—C11 1.369 (3)
O1—C6 1.403 (3) C6—C7 1.369 (3)
O2—N2 1.217 (3) C7—C8 1.386 (4)
O3—N2 1.208 (3) C7—H7 0.9300
N1—C1 1.324 (3) C8—C9 1.377 (3)
N1—C5 1.336 (3) C8—H8 0.9300
N2—C4 1.457 (3) C9—C10 1.379 (3)
C1—C2 1.379 (3) C9—C12 1.505 (3)
C2—C3 1.361 (3) C10—C11 1.380 (3)
C2—H2 0.9300 C10—H10 0.9300
C3—C4 1.376 (3) C11—H11 0.9300
C3—H3 0.9300 C12—H12A 0.9600
C4—C5 1.358 (3) C12—H12B 0.9600
C5—H5 0.9300 C12—H12C 0.9600
C1—O1—C6 120.4 (2) C7—C6—O1 117.4 (2)
C1—N1—C5 116.4 (2) C6—C7—C8 118.8 (3)
O3—N2—O2 122.5 (3) C6—C7—H7 120.6
O3—N2—C4 118.6 (3) C8—C7—H7 120.6
O2—N2—C4 118.8 (2) C9—C8—C7 122.0 (2)
N1—C1—O1 118.8 (2) C9—C8—H8 119.0
N1—C1—C2 124.3 (3) C7—C8—H8 119.0
O1—C1—C2 116.9 (2) C8—C9—C10 117.3 (2)
C3—C2—C1 118.5 (2) C8—C9—C12 122.0 (2)
C3—C2—H2 120.7 C10—C9—C12 120.7 (3)
C1—C2—H2 120.7 C9—C10—C11 121.9 (3)
C2—C3—C4 117.7 (2) C9—C10—H10 119.0
C2—C3—H3 121.2 C11—C10—H10 119.0
C4—C3—H3 121.2 C6—C11—C10 119.1 (3)
C5—C4—C3 120.4 (3) C6—C11—H11 120.4
C5—C4—N2 119.1 (3) C10—C11—H11 120.4
C3—C4—N2 120.5 (2) C9—C12—H12A 109.5
N1—C5—C4 122.7 (3) C9—C12—H12B 109.5
N1—C5—H5 118.7 H12A—C12—H12B 109.5
C4—C5—H5 118.7 C9—C12—H12C 109.5
C11—C6—C7 120.9 (2) H12A—C12—H12C 109.5
C11—C6—O1 121.5 (2) H12B—C12—H12C 109.5
C5—N1—C1—O1 178.5 (2) C3—C4—C5—N1 −1.2 (4)
C5—N1—C1—C2 0.7 (4) N2—C4—C5—N1 179.4 (2)
C6—O1—C1—N1 18.3 (4) C1—O1—C6—C11 52.0 (3)
C6—O1—C1—C2 −163.8 (2) C1—O1—C6—C7 −133.5 (2)
N1—C1—C2—C3 −0.7 (4) C11—C6—C7—C8 0.9 (4)
O1—C1—C2—C3 −178.6 (2) O1—C6—C7—C8 −173.7 (2)
C1—C2—C3—C4 −0.2 (4) C6—C7—C8—C9 −1.2 (4)
C2—C3—C4—C5 1.1 (4) C7—C8—C9—C10 0.0 (4)
C2—C3—C4—N2 −179.4 (2) C7—C8—C9—C12 −179.8 (2)
O3—N2—C4—C5 −176.4 (3) C8—C9—C10—C11 1.6 (4)
O2—N2—C4—C5 1.3 (4) C12—C9—C10—C11 −178.6 (3)
O3—N2—C4—C3 4.1 (4) C7—C6—C11—C10 0.7 (4)
O2—N2—C4—C3 −178.1 (3) O1—C6—C11—C10 175.0 (2)
C1—N1—C5—C4 0.2 (4) C9—C10—C11—C6 −1.9 (4)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C5—H5···O(3)i 0.93 2.43 3.135 (3) 132

Symmetry codes: (i) −x+3/2, y−1/2, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HG5116).

References

  1. Brandenburg, K. (2006). DIAMOND Crystal Impact GbR, Bonn, Germany.
  2. Bruker (2009). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  4. Nasir, S. B., Abdullah, Z., Fairuz, Z. A., Ng, S. W. & Tiekink, E. R. T. (2010). Acta Cryst. E66, o2428. [DOI] [PMC free article] [PubMed]
  5. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811044047/hg5116sup1.cif

e-67-o3077-sup1.cif (15.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811044047/hg5116Isup2.hkl

e-67-o3077-Isup2.hkl (96.1KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811044047/hg5116Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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