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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Oct 29;67(Pt 11):o3088. doi: 10.1107/S1600536811044321

2-(2-Meth­oxy­phen­oxy)pyrazine

Shah Bakhtiar Nasir a, Zainal Abidin Fairuz a, Zanariah Abdullah a,, Seik Weng Ng a,b, Edward R T Tiekink a,*
PMCID: PMC3247475  PMID: 22220093

Abstract

A significant twist is observed in the title molecule, C11H10N2O2, as seen in the dihedral angle between the pyrazine and benzene rings of 72.79 (8)°. The meth­oxy group is almost coplanar with the benzene ring to which it is attached [C—O—C—C torsion angle = 175.83 (15)°]. Centrosymmetric dimers are formed in the crystal structure which are held together by weak π–π inter­actions between pyrazine rings [centroid–centroid distance = 3.8534 (10) Å].

Related literature

For the structure of a related pyrimidine derivative, see: Aznan Akhmad et al. (2010).graphic file with name e-67-o3088-scheme1.jpg

Experimental

Crystal data

  • C11H10N2O2

  • M r = 202.21

  • Monoclinic, Inline graphic

  • a = 7.7497 (10) Å

  • b = 5.8826 (8) Å

  • c = 21.845 (3) Å

  • β = 92.459 (2)°

  • V = 995.0 (2) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.10 mm−1

  • T = 293 K

  • 0.35 × 0.3 × 0.2 mm

Data collection

  • Bruker SMART APEX diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.789, T max = 0.862

  • 7364 measured reflections

  • 1743 independent reflections

  • 1262 reflections with I > 2σ(I)

  • R int = 0.041

Refinement

  • R[F 2 > 2σ(F 2)] = 0.039

  • wR(F 2) = 0.107

  • S = 1.03

  • 1743 reflections

  • 138 parameters

  • H-atom parameters constrained

  • Δρmax = 0.13 e Å−3

  • Δρmin = −0.13 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811044321/hg5121sup1.cif

e-67-o3088-sup1.cif (14.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811044321/hg5121Isup2.hkl

e-67-o3088-Isup2.hkl (85.9KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811044321/hg5121Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Acknowledgments

We thank the University of Malaya (grant No. RG027/09AFR) for supporting this study.

supplementary crystallographic information

Comment

As a part of an on-going synthetic and structural study of N-heterocyclic derivatives (Aznan Akhmad et al., 2010), the title compound, (I), was investigated. In (I), Fig. 1, the benzene ring is almost orthogonal to the pyrazine ring, forming a dihedral angle of 72.79 (8)°. The methoxy substituent is co-planar to the benzene ring to which it is connected: the C11—O2—C10—C5 torsion angle is 175.83 (15)°. In the crystal structure, centrosymmetrically related pyrazine rings associate via weak π–π interactions [centroid···centroidi distance = 3.8534 (10) Å for i: 1 - x, -y, 1 - z]. The dimeric aggregates stack along the b axis, Fig. 2.

Experimental

o-Methoxyphenol (2.50 g, 20 mmol) and sodium hydroxide (0.80 g, 20 mmol) were dissolved in water (50 ml) and to the solution was added 2-chloropyrazine (2.28 g, 20 mmol) dissolved in THF (50 ml). The mixture was heated for 6 h. Water was added and the organic phase extracted with chloroform. The chloroform solution was dried over sodium sulfate; slow evaporation led to the formation of colourless crystals.

Refinement

Hydrogen atoms were placed at calculated positions (C—H 0.93–0.96 Å) and were treated as riding on their parent carbon atoms, with U(H) set to 1.2–1.5Ueq(C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I) showing the atom-labelling scheme and displacement ellipsoids at the 35% probability level.

Fig. 2.

Fig. 2.

Unit-cell contents for (I) shown in projection down the b axis. The π–π interactions are shown as purple dashed lines.

Crystal data

C11H10N2O2 F(000) = 424
Mr = 202.21 Dx = 1.350 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 1739 reflections
a = 7.7497 (10) Å θ = 2.8–27.3°
b = 5.8826 (8) Å µ = 0.10 mm1
c = 21.845 (3) Å T = 293 K
β = 92.459 (2)° Block, colourless
V = 995.0 (2) Å3 0.35 × 0.3 × 0.2 mm
Z = 4

Data collection

Bruker SMART APEX diffractometer 1743 independent reflections
Radiation source: fine-focus sealed tube 1262 reflections with I > 2σ(I)
graphite Rint = 0.041
ω scans θmax = 25.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −9→8
Tmin = 0.789, Tmax = 0.862 k = −6→6
7364 measured reflections l = −25→25

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.039 H-atom parameters constrained
wR(F2) = 0.107 w = 1/[σ2(Fo2) + (0.051P)2 + 0.0981P] where P = (Fo2 + 2Fc2)/3
S = 1.03 (Δ/σ)max = 0.001
1743 reflections Δρmax = 0.13 e Å3
138 parameters Δρmin = −0.13 e Å3
0 restraints Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.105 (7)

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.44004 (16) 0.13299 (17) 0.62993 (5) 0.0618 (4)
O2 0.56589 (16) 0.4818 (2) 0.69804 (6) 0.0658 (4)
N1 0.58582 (17) 0.3536 (2) 0.56159 (6) 0.0505 (4)
N2 0.7704 (2) −0.0324 (2) 0.53106 (8) 0.0716 (5)
C1 0.5605 (2) 0.1567 (2) 0.58683 (7) 0.0455 (4)
C2 0.6494 (2) −0.0375 (3) 0.57169 (8) 0.0626 (5)
H2 0.6235 −0.1744 0.5905 0.075*
C3 0.7991 (2) 0.1687 (3) 0.50551 (9) 0.0609 (5)
H3 0.8842 0.1806 0.4770 0.073*
C4 0.7080 (2) 0.3568 (3) 0.51984 (8) 0.0535 (5)
H4 0.7310 0.4928 0.5001 0.064*
C5 0.3345 (2) 0.3184 (3) 0.64234 (7) 0.0487 (4)
C6 0.1658 (3) 0.3139 (3) 0.62125 (8) 0.0637 (5)
H6 0.1254 0.1940 0.5969 0.076*
C7 0.0555 (2) 0.4879 (4) 0.63627 (9) 0.0711 (6)
H7 −0.0593 0.4862 0.6219 0.085*
C8 0.1162 (3) 0.6618 (3) 0.67224 (9) 0.0674 (6)
H8 0.0420 0.7789 0.6824 0.081*
C9 0.2854 (2) 0.6670 (3) 0.69370 (8) 0.0571 (5)
H9 0.3249 0.7873 0.7181 0.068*
C10 0.3965 (2) 0.4947 (3) 0.67918 (7) 0.0484 (4)
C11 0.6363 (3) 0.6667 (3) 0.73229 (10) 0.0794 (6)
H11A 0.7582 0.6441 0.7394 0.119*
H11B 0.5817 0.6761 0.7708 0.119*
H11C 0.6166 0.8052 0.7098 0.119*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0810 (9) 0.0387 (6) 0.0682 (8) 0.0039 (5) 0.0331 (7) 0.0021 (5)
O2 0.0604 (8) 0.0644 (8) 0.0725 (8) 0.0036 (6) 0.0023 (6) −0.0089 (6)
N1 0.0558 (9) 0.0438 (8) 0.0529 (8) 0.0063 (6) 0.0124 (7) 0.0032 (6)
N2 0.0788 (12) 0.0533 (9) 0.0851 (11) 0.0142 (8) 0.0294 (9) −0.0049 (8)
C1 0.0516 (10) 0.0403 (9) 0.0450 (9) 0.0003 (7) 0.0088 (7) −0.0039 (7)
C2 0.0779 (13) 0.0399 (9) 0.0716 (12) 0.0082 (8) 0.0209 (10) 0.0004 (8)
C3 0.0575 (11) 0.0613 (11) 0.0655 (11) 0.0062 (9) 0.0200 (9) −0.0036 (9)
C4 0.0531 (10) 0.0532 (10) 0.0551 (10) 0.0039 (8) 0.0130 (8) 0.0054 (8)
C5 0.0584 (11) 0.0415 (9) 0.0479 (9) 0.0004 (8) 0.0209 (8) 0.0017 (7)
C6 0.0681 (13) 0.0671 (12) 0.0569 (11) −0.0133 (10) 0.0153 (9) −0.0117 (9)
C7 0.0531 (12) 0.0906 (15) 0.0703 (12) 0.0018 (10) 0.0112 (9) −0.0025 (12)
C8 0.0642 (13) 0.0642 (12) 0.0758 (13) 0.0118 (10) 0.0244 (10) −0.0003 (10)
C9 0.0637 (12) 0.0478 (10) 0.0612 (11) −0.0007 (8) 0.0204 (9) −0.0056 (8)
C10 0.0539 (10) 0.0449 (9) 0.0476 (9) −0.0006 (8) 0.0153 (7) 0.0024 (7)
C11 0.0816 (15) 0.0739 (14) 0.0819 (14) −0.0131 (11) −0.0062 (11) −0.0045 (11)

Geometric parameters (Å, °)

O1—C1 1.3611 (18) C5—C6 1.368 (2)
O1—C5 1.3969 (18) C5—C10 1.386 (2)
O2—C10 1.361 (2) C6—C7 1.382 (3)
O2—C11 1.416 (2) C6—H6 0.9300
N1—C1 1.3013 (19) C7—C8 1.362 (3)
N1—C4 1.343 (2) C7—H7 0.9300
N2—C2 1.319 (2) C8—C9 1.374 (3)
N2—C3 1.331 (2) C8—H8 0.9300
C1—C2 1.382 (2) C9—C10 1.376 (2)
C2—H2 0.9300 C9—H9 0.9300
C3—C4 1.356 (2) C11—H11A 0.9600
C3—H3 0.9300 C11—H11B 0.9600
C4—H4 0.9300 C11—H11C 0.9600
C1—O1—C5 118.61 (11) C5—C6—H6 120.1
C10—O2—C11 117.50 (14) C7—C6—H6 120.1
C1—N1—C4 115.09 (13) C8—C7—C6 119.45 (19)
C2—N2—C3 116.06 (14) C8—C7—H7 120.3
N1—C1—O1 120.31 (13) C6—C7—H7 120.3
N1—C1—C2 123.27 (14) C7—C8—C9 120.97 (17)
O1—C1—C2 116.42 (14) C7—C8—H8 119.5
N2—C2—C1 121.24 (16) C9—C8—H8 119.5
N2—C2—H2 119.4 C8—C9—C10 120.18 (17)
C1—C2—H2 119.4 C8—C9—H9 119.9
N2—C3—C4 122.03 (16) C10—C9—H9 119.9
N2—C3—H3 119.0 O2—C10—C9 125.19 (16)
C4—C3—H3 119.0 O2—C10—C5 116.11 (14)
N1—C4—C3 122.29 (15) C9—C10—C5 118.71 (17)
N1—C4—H4 118.9 O2—C11—H11A 109.5
C3—C4—H4 118.9 O2—C11—H11B 109.5
C6—C5—C10 120.86 (15) H11A—C11—H11B 109.5
C6—C5—O1 118.58 (15) O2—C11—H11C 109.5
C10—C5—O1 120.38 (16) H11A—C11—H11C 109.5
C5—C6—C7 119.83 (17) H11B—C11—H11C 109.5
C4—N1—C1—O1 179.84 (14) O1—C5—C6—C7 175.72 (14)
C4—N1—C1—C2 −1.0 (2) C5—C6—C7—C8 −0.3 (3)
C5—O1—C1—N1 5.6 (2) C6—C7—C8—C9 0.1 (3)
C5—O1—C1—C2 −173.59 (15) C7—C8—C9—C10 −0.2 (3)
C3—N2—C2—C1 −0.7 (3) C11—O2—C10—C9 −4.0 (2)
N1—C1—C2—N2 1.7 (3) C11—O2—C10—C5 175.83 (15)
O1—C1—C2—N2 −179.10 (16) C8—C9—C10—O2 −179.69 (16)
C2—N2—C3—C4 −0.8 (3) C8—C9—C10—C5 0.5 (2)
C1—N1—C4—C3 −0.5 (3) C6—C5—C10—O2 179.48 (14)
N2—C3—C4—N1 1.5 (3) O1—C5—C10—O2 4.4 (2)
C1—O1—C5—C6 106.12 (17) C6—C5—C10—C9 −0.7 (2)
C1—O1—C5—C10 −78.74 (19) O1—C5—C10—C9 −175.73 (13)
C10—C5—C6—C7 0.6 (3)

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HG5121).

References

  1. Aznan Akhmad, M. A., Abdullah, Z., Fairuz, Z. A., Ng, S. W. & Tiekink, E. R. T. (2010). Acta Cryst. E66, o2400. [DOI] [PMC free article] [PubMed]
  2. Brandenburg, K. (2006). DIAMOND Crystal Impact GbR, Bonn, Germany.
  3. Bruker (2009). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  4. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  5. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811044321/hg5121sup1.cif

e-67-o3088-sup1.cif (14.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811044321/hg5121Isup2.hkl

e-67-o3088-Isup2.hkl (85.9KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811044321/hg5121Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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