Skip to main content
Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Dec 3;68(Pt 1):o3. doi: 10.1107/S1600536811050975

4-[(Hy­droxy)(4-methyl­phen­yl)methyl­idene]isochroman-1,3-dione

Akoun Abou a,*, Abdoulaye Djandé b, Adama Saba b, Thierry Chiavassa c, Rita Kakou-Yao a
PMCID: PMC3254283  PMID: 22259535

Abstract

In the title compound, C17H12O4, the six-membered heterocyclic ring adopts a distorted screw-boat conformation. The mol­ecular structure exhibits an S(6) ring motif, owing to an intra­molecular O—H⋯O hydrogen bond. In the crystal, weak C—H⋯O contacts generate an infinite chain along the c axis. There are also π–π stacking inter­actions between neighbouring isochromanedione benzene rings, with a centroid–centroid distance of 3.755 (1) Å, and C—O⋯π inter­actions with an O⋯centroid distance of 3.964 (2) Å.

Related literature

For the biological activity of isochromanones, see: Bianchi et al., (2004); Buntin et al. (2008). For π–π stacking inter­actions, see: Janiak (2000). For hydrogen-bond motifs, see: Bernstein et al. (1995). For ring puckering parameters, see: Cremer & Pople (1975).graphic file with name e-68-000o3-scheme1.jpg

Experimental

Crystal data

  • C17H12O4

  • M r = 280.27

  • Monoclinic, Inline graphic

  • a = 15.6767 (6) Å

  • b = 5.9655 (2) Å

  • c = 14.4589 (4) Å

  • β = 102.961 (1)°

  • V = 1317.74 (8) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.10 mm−1

  • T = 298 K

  • 0.40 × 0.34 × 0.10 mm

Data collection

  • Nonius KappaCCD diffractometer

  • 12419 measured reflections

  • 3304 independent reflections

  • 2684 reflections with I > 2σ(I)

  • R int = 0.053

Refinement

  • R[F 2 > 2σ(F 2)] = 0.057

  • wR(F 2) = 0.150

  • S = 1.08

  • 3304 reflections

  • 193 parameters

  • H-atom parameters constrained

  • Δρmax = 0.20 e Å−3

  • Δρmin = −0.16 e Å−3

Data collection: COLLECT (Hooft, 1998); cell refinement: DENZO/SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO/SCALEPACK; program(s) used to solve structure: SIR2004 (Burla et al., 2005); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97, publCIF (Westrip, 2010) and WinGX (Farrugia, 1999).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811050975/fj2488sup1.cif

e-68-000o3-sup1.cif (24.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811050975/fj2488Isup2.hkl

e-68-000o3-Isup2.hkl (158.8KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811050975/fj2488Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O4—H4⋯O3 0.82 1.75 2.485 (2) 148
C7—H7⋯O2i 0.93 2.57 3.299 (2) 136

Symmetry code: (i) Inline graphic.

Acknowledgments

We thank the Laboratoire de Physique des Inter­actions Ioniques et Spectropôle, Université de Provence, and Université Paul Cézanne, Faculté des Sciences et Techniques de Saint Jérôme, Marseille, France, for the use of their diffractometer.

supplementary crystallographic information

Comment

The title molecule is related to the isochromanone derivatives that are generally known as regulators of plant growth (Bianchi et al., 2004). Depending on their chemical structure and concentration they can act either as inhibitors or stimulators in these processes. Some substituted isochromanones isolated from myxobacteria strains were introduced as anti-fungal agents (Buntin et al., 2008).

The structure of the title compound (I) (Fig. 1) consists of two essentially planar benzene rings with the maximum deviations from the best planes of 0.035 (1) Å for atom C6 (benzene ring C4—C9) and 0.008 (2) Å for atoms C12 and C15 (benzene ring C11—C16). An S(6) ring motifs (Bernstein et al., 1995), arising from the intramolecular hydrogen bond O—H···O, generates a planar pseudo six-membered ring (maximum deviation from planarity being ∓0.055 (2) Å for atoms C1 and C10) to result in a tricyclic ring (Fig. 1). The dihedral angles between two benzene rings is 58.99 (8)° and that between the pseudo six-membered ring and benzene rings are 13.75 (8) ° (ring C4—C9) and 53.96 (8)° (ring C11—C16). The heterocyclic ring O1/C1—C5 adopts a distorted screw-boat conformation as judged from the puckering parameters (Cremer & Pople, 1975): Q = 0.0974 (17) Å, θ = 69.6 (1)° and φ = 132.6 (1)°. Furthermore, intermolecular C—H···O hydrogen bonds (Table 1) link molecules into infinite chains along the [001] (Fig. 2).

The supramolecular aggregation is completed by the presence of C—O···π interactions (O3···Cg3[x,1/2 - y,-3/2 + z] = 3.964 (2) Å, C2—O3···Cg3 = 83.89 (12)°, where Cg3 is the centroid of the benzene ring C11—C16 and π–π stacking between two parallel isochromandione-benzene C4—C9 rings; in the latter, the centroid···centroid distance, (Cg2···Cg2(-x,2 - y,-z) of 3.755 (1) Å), is less than 3.8 Å, the maximum regarded as relevant for π–π interactions (Janiak, 2000) (Fig.3).

Experimental

To a solution of p-Toluoyl chloride (4.10-2 mole) in dried tetrahydrofuran (150 ml), was added dried triethylamine (0.12 mole) and homophtalic anhydride (4.10-2 mole) by small portions over 30 min. The mixture was then refluxed for 3 h and poured in 300 ml of chloroform. The solution was acidified with dilute hydrochloric acid until the pH was 2 - 3. The organic layer was extracted, washed with water, dried over MgSO4 and the solvent removed. The crude product was recrystallized from chloroform-hexane (1/1, v/v) mixture. Yellow crystals of the title compound were obtained in a good yield: 85%; M.pt. 387–388 K.

Refinement

H atoms were placed in calculated positions [O—H = 0.82 Å and C—H = 0.93 (aromatic) or 0.96 Å (methyl group)] and refined using a riding model approximation with Uiso(H) constrained to 1.2 (aromatic) or 1.5 (methyle, O—H) times Ueq of the respective parent atom.

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I) showing the atomic labeling scheme with displacement ellipsoids drawn at the 50% probability level. H atoms are shown as spheres of arbitary radius. Dashed lines indicate an hydrogen bond.

Fig. 2.

Fig. 2.

Crystal packing, viewed down the b axis, showing parallel chains along the c direction. Dashed lines indicate hydrogen bonds. H atoms not involved in hydrogen bonds have been omitted for clarity.

Fig. 3.

Fig. 3.

A view of the crystal packing, showing C—O···π and π–π stacking interactions (dashed lines). The green dots are centroids of rings. H atoms have been omitted for clarity.

Crystal data

C17H12O4 F(000) = 584
Mr = 280.27 Dx = 1.413 Mg m3
Monoclinic, P21/c Melting point = 387–388 K
Hall symbol: -P 2ybc Mo Kα radiation, λ = 0.71073 Å
a = 15.6767 (6) Å Cell parameters from 12419 reflections
b = 5.9655 (2) Å θ = 2.9–29.0°
c = 14.4589 (4) Å µ = 0.10 mm1
β = 102.961 (1)° T = 298 K
V = 1317.74 (8) Å3 Prism, yellow
Z = 4 0.40 × 0.34 × 0.10 mm

Data collection

Nonius KappaCCD diffractometer 2684 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube Rint = 0.053
graphite θmax = 29.0°, θmin = 2.9°
φ and ω scans h = −21→20
12419 measured reflections k = −7→7
3304 independent reflections l = −19→19

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.057 H-atom parameters constrained
wR(F2) = 0.150 w = 1/[σ2(Fo2) + (0.0625P)2 + 0.424P] where P = (Fo2 + 2Fc2)/3
S = 1.08 (Δ/σ)max < 0.001
3304 reflections Δρmax = 0.20 e Å3
193 parameters Δρmin = −0.16 e Å3
0 restraints Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
48 constraints Extinction coefficient: 0.11 (2)
Primary atom site location: structure-invariant direct methods

Special details

Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. The 2 reflections [(-5 2 1), (2 0 0)] whith (Iobs-Icalc)/Sigma(I) superior to 10, are not used in the refinement. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.85227 (9) 0.2252 (2) 0.70711 (8) 0.0608 (4)
C5 0.83327 (9) 0.3569 (2) 0.51682 (9) 0.0361 (3)
C4 0.88171 (10) 0.4900 (3) 0.59015 (10) 0.0420 (4)
O3 0.77485 (10) −0.0788 (3) 0.66859 (10) 0.0690 (4)
O4 0.69333 (9) −0.1556 (2) 0.50349 (10) 0.0632 (4)
H4 0.7147 −0.1802 0.5597 0.095*
C15 0.59439 (11) 0.3609 (3) 0.27099 (12) 0.0484 (4)
H15 0.5656 0.4979 0.2599 0.058*
C1 0.78494 (10) 0.1628 (3) 0.54105 (10) 0.0405 (4)
C6 0.83808 (10) 0.4128 (3) 0.42383 (10) 0.0401 (4)
H6 0.8110 0.3211 0.3738 0.048*
C9 0.92667 (11) 0.6800 (3) 0.57079 (12) 0.0514 (4)
H9 0.9579 0.7670 0.6204 0.062*
C16 0.63851 (10) 0.3071 (3) 0.36170 (12) 0.0454 (4)
H16 0.6403 0.4089 0.4108 0.054*
C11 0.68042 (10) 0.1011 (3) 0.38016 (11) 0.0412 (4)
C10 0.72372 (10) 0.0383 (3) 0.47841 (12) 0.0441 (4)
C12 0.67731 (11) −0.0477 (3) 0.30589 (13) 0.0515 (4)
H12 0.7043 −0.1870 0.3173 0.062*
C8 0.92474 (12) 0.7385 (3) 0.47832 (13) 0.0530 (4)
H8 0.9519 0.8693 0.4648 0.064*
C3 0.89085 (12) 0.4261 (3) 0.68931 (11) 0.0532 (5)
O2 0.93083 (11) 0.5246 (3) 0.75773 (9) 0.0782 (5)
C14 0.59194 (10) 0.2147 (3) 0.19552 (12) 0.0487 (4)
C13 0.63411 (12) 0.0107 (3) 0.21485 (13) 0.0567 (5)
H13 0.6334 −0.0896 0.1654 0.068*
C7 0.88200 (11) 0.6007 (3) 0.40553 (11) 0.0461 (4)
H7 0.8831 0.6360 0.3432 0.055*
C2 0.80260 (12) 0.0934 (3) 0.63907 (12) 0.0504 (4)
C17 0.54283 (14) 0.2771 (4) 0.09711 (14) 0.0719 (6)
H17A 0.4814 0.2511 0.0913 0.108*
H17B 0.5634 0.1874 0.0514 0.108*
H17C 0.5524 0.4327 0.0859 0.108*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0781 (9) 0.0731 (9) 0.0303 (6) 0.0141 (7) 0.0104 (5) 0.0079 (5)
C5 0.0390 (7) 0.0374 (8) 0.0311 (7) 0.0060 (5) 0.0063 (5) −0.0008 (5)
C4 0.0461 (8) 0.0458 (9) 0.0313 (7) 0.0105 (6) 0.0029 (6) −0.0061 (6)
O3 0.0837 (10) 0.0700 (9) 0.0572 (8) 0.0078 (7) 0.0242 (7) 0.0287 (7)
O4 0.0656 (8) 0.0478 (7) 0.0736 (9) −0.0084 (6) 0.0102 (7) 0.0191 (6)
C15 0.0448 (8) 0.0428 (9) 0.0566 (10) 0.0044 (7) 0.0092 (7) 0.0052 (7)
C1 0.0452 (8) 0.0419 (8) 0.0357 (7) 0.0064 (6) 0.0116 (6) 0.0047 (6)
C6 0.0435 (8) 0.0450 (8) 0.0306 (7) −0.0051 (6) 0.0056 (6) −0.0029 (6)
C9 0.0527 (9) 0.0473 (9) 0.0474 (9) −0.0001 (7) −0.0031 (7) −0.0147 (7)
C16 0.0481 (8) 0.0383 (8) 0.0491 (9) 0.0034 (6) 0.0094 (7) −0.0026 (6)
C11 0.0382 (7) 0.0355 (8) 0.0482 (8) −0.0021 (6) 0.0064 (6) 0.0002 (6)
C10 0.0463 (8) 0.0371 (8) 0.0509 (9) 0.0039 (6) 0.0149 (7) 0.0069 (6)
C12 0.0520 (9) 0.0383 (9) 0.0606 (10) 0.0032 (7) 0.0048 (8) −0.0059 (7)
C8 0.0551 (10) 0.0438 (9) 0.0567 (10) −0.0094 (7) 0.0053 (8) −0.0031 (7)
C3 0.0648 (11) 0.0583 (11) 0.0328 (8) 0.0203 (8) 0.0030 (7) −0.0057 (7)
O2 0.1091 (12) 0.0797 (10) 0.0345 (6) 0.0199 (9) −0.0081 (7) −0.0154 (6)
C14 0.0380 (8) 0.0586 (10) 0.0478 (9) −0.0055 (7) 0.0060 (6) 0.0021 (7)
C13 0.0563 (10) 0.0564 (11) 0.0544 (10) −0.0008 (8) 0.0059 (8) −0.0161 (8)
C7 0.0487 (9) 0.0504 (9) 0.0380 (8) −0.0070 (7) 0.0069 (6) 0.0024 (6)
C2 0.0563 (10) 0.0564 (10) 0.0414 (8) 0.0153 (8) 0.0169 (7) 0.0108 (7)
C17 0.0641 (12) 0.0963 (17) 0.0503 (11) −0.0034 (11) 0.0024 (9) 0.0090 (10)

Geometric parameters (Å, °)

O1—C2 1.360 (2) C9—H9 0.9300
O1—C3 1.392 (2) C16—C11 1.391 (2)
C5—C4 1.404 (2) C16—H16 0.9300
C5—C6 1.404 (2) C11—C12 1.386 (2)
C5—C1 1.469 (2) C11—C10 1.479 (2)
C4—C9 1.396 (2) C12—C13 1.383 (3)
C4—C3 1.459 (2) C12—H12 0.9300
O3—C2 1.229 (2) C8—C7 1.384 (2)
O4—C10 1.3316 (19) C8—H8 0.9300
O4—H4 0.8200 C3—O2 1.199 (2)
C15—C16 1.376 (2) C14—C13 1.383 (3)
C15—C14 1.391 (2) C14—C17 1.505 (2)
C15—H15 0.9300 C13—H13 0.9300
C1—C10 1.380 (2) C7—H7 0.9300
C1—C2 1.443 (2) C17—H17A 0.9600
C6—C7 1.372 (2) C17—H17B 0.9600
C6—H6 0.9300 C17—H17C 0.9600
C9—C8 1.376 (3)
C2—O1—C3 124.49 (13) C1—C10—C11 126.59 (14)
C4—C5—C6 116.93 (14) C13—C12—C11 120.05 (16)
C4—C5—C1 119.11 (13) C13—C12—H12 120.0
C6—C5—C1 123.87 (13) C11—C12—H12 120.0
C9—C4—C5 121.33 (14) C9—C8—C7 119.32 (16)
C9—C4—C3 117.80 (15) C9—C8—H8 120.3
C5—C4—C3 120.78 (16) C7—C8—H8 120.3
C10—O4—H4 109.5 O2—C3—O1 115.94 (16)
C16—C15—C14 121.40 (16) O2—C3—C4 126.9 (2)
C16—C15—H15 119.3 O1—C3—C4 117.10 (15)
C14—C15—H15 119.3 C13—C14—C15 117.73 (15)
C10—C1—C2 116.26 (15) C13—C14—C17 121.93 (18)
C10—C1—C5 126.02 (13) C15—C14—C17 120.32 (17)
C2—C1—C5 117.72 (14) C12—C13—C14 121.58 (16)
C7—C6—C5 121.07 (14) C12—C13—H13 119.2
C7—C6—H6 119.5 C14—C13—H13 119.2
C5—C6—H6 119.5 C6—C7—C8 121.13 (15)
C8—C9—C4 119.92 (15) C6—C7—H7 119.4
C8—C9—H9 120.0 C8—C7—H7 119.4
C4—C9—H9 120.0 O3—C2—O1 114.97 (15)
C15—C16—C11 120.24 (16) O3—C2—C1 125.20 (18)
C15—C16—H16 119.9 O1—C2—C1 119.82 (16)
C11—C16—H16 119.9 C14—C17—H17A 109.5
C12—C11—C16 118.97 (15) C14—C17—H17B 109.5
C12—C11—C10 120.72 (14) H17A—C17—H17B 109.5
C16—C11—C10 120.24 (15) C14—C17—H17C 109.5
O4—C10—C1 121.84 (15) H17A—C17—H17C 109.5
O4—C10—C11 111.50 (14) H17B—C17—H17C 109.5
C6—C5—C4—C9 5.1 (2) C16—C11—C12—C13 0.9 (3)
C1—C5—C4—C9 −178.11 (14) C10—C11—C12—C13 177.89 (16)
C6—C5—C4—C3 −171.19 (14) C4—C9—C8—C7 −3.5 (3)
C1—C5—C4—C3 5.6 (2) C2—O1—C3—O2 178.20 (16)
C4—C5—C1—C10 168.82 (15) C2—O1—C3—C4 −4.3 (2)
C6—C5—C1—C10 −14.7 (2) C9—C4—C3—O2 3.0 (3)
C4—C5—C1—C2 −11.4 (2) C5—C4—C3—O2 179.43 (17)
C6—C5—C1—C2 165.14 (14) C9—C4—C3—O1 −174.25 (14)
C4—C5—C6—C7 −5.5 (2) C5—C4—C3—O1 2.2 (2)
C1—C5—C6—C7 177.88 (14) C16—C15—C14—C13 1.2 (2)
C5—C4—C9—C8 −0.7 (2) C16—C15—C14—C17 179.69 (16)
C3—C4—C9—C8 175.73 (16) C11—C12—C13—C14 −1.1 (3)
C14—C15—C16—C11 −1.4 (3) C15—C14—C13—C12 0.1 (3)
C15—C16—C11—C12 0.3 (2) C17—C14—C13—C12 −178.41 (18)
C15—C16—C11—C10 −176.67 (15) C5—C6—C7—C8 1.5 (3)
C2—C1—C10—O4 −10.7 (2) C9—C8—C7—C6 3.2 (3)
C5—C1—C10—O4 169.10 (15) C3—O1—C2—O3 179.33 (15)
C2—C1—C10—C11 165.94 (15) C3—O1—C2—C1 −1.8 (2)
C5—C1—C10—C11 −14.3 (3) C10—C1—C2—O3 8.2 (2)
C12—C11—C10—O4 −52.7 (2) C5—C1—C2—O3 −171.65 (16)
C16—C11—C10—O4 124.25 (16) C10—C1—C2—O1 −170.55 (14)
C12—C11—C10—C1 130.41 (18) C5—C1—C2—O1 9.6 (2)
C16—C11—C10—C1 −52.7 (2)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O4—H4···O3 0.82 1.75 2.485 (2) 148
C7—H7···O2i 0.93 2.57 3.299 (2) 136

Symmetry codes: (i) x, −y+3/2, z−1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: FJ2488).

References

  1. Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573.
  2. Bianchi, D. A., Blanco, N. E., Carrillo, N. & Kaufnam, T. S. (2004). J. Agric. Food Chem. 52, 1923–1927. [DOI] [PubMed]
  3. Buntin, K., Rachid, S., Scharfe, M., Blöcker, H., Weissman, K. J. & Müller, R. (2008). Angew. Chem. Int. Ed. Engl. 47, 4595–4599. [DOI] [PubMed]
  4. Burla, M. C., Caliandro, R., Camalli, M., Carrozzini, B., Cascarano, G. L., De Caro, L., Giacovazzo, C., Polidori, G. & Spagna, R. (2005). J. Appl. Cryst. 38, 381–388.
  5. Cremer, D. & Pople, J. (1975). J. Am. Chem. Soc. 97, 1354–1358.
  6. Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838.
  7. Hooft, R. (1998). COLLECT Nonius BV, Delft, The Netherlands.
  8. Janiak, C. (2000). J. Chem. Soc. Dalton Trans. pp. 3885–3896.
  9. Otwinowski, Z. & Minor, W. (1997). Methods in Enzymology, Vol. 276, Macromolecular Crystallography, Part A, edited by C. W. Carter Jr & R. M. Sweet, pp. 307–326. New York: Academic Press.
  10. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  11. Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]
  12. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811050975/fj2488sup1.cif

e-68-000o3-sup1.cif (24.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811050975/fj2488Isup2.hkl

e-68-000o3-Isup2.hkl (158.8KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811050975/fj2488Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

RESOURCES