Abstract
The title molecule, C13H8BrN3O5, is slightly twisted, with the dihedral angle between the two benzene rings being 5.9 (1)°. In the crystal, N—H⋯O hydrogen bonds link the molecules into one-dimensional chains running along [101]. Further stabilization of the crystal structure is provided by π–π interactions [shortest centroid–centroid distance = 3.6467 (17) Å].
Related literature
For background to the biological activity of N-substituted benzamides, their use in synthesis and for related structures, see: Saeed et al. (2011a
▶,b
▶).
Experimental
Crystal data
C13H8BrN3O5
M r = 366.13
Monoclinic,
a = 7.1273 (2) Å
b = 26.6676 (7) Å
c = 7.5428 (2) Å
β = 101.652 (2)°
V = 1404.10 (7) Å3
Z = 4
Mo Kα radiation
μ = 2.96 mm−1
T = 296 K
0.56 × 0.34 × 0.30 mm
Data collection
Bruker APEXII CCD diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.288, T max = 0.471
18250 measured reflections
2476 independent reflections
2007 reflections with I > 2σ(I)
R int = 0.060
Refinement
R[F 2 > 2σ(F 2)] = 0.035
wR(F 2) = 0.108
S = 1.10
2476 reflections
204 parameters
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.25 e Å−3
Δρmin = −0.46 e Å−3
Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97.
Supplementary Material
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811051464/tk5029sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811051464/tk5029Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811051464/tk5029Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N1—H1N⋯O1i | 0.93 (3) | 1.93 (3) | 2.818 (3) | 159 (3) |
Symmetry code: (i)
.
Acknowledgments
Dr Wesley T.-K. Chan, Professor Z.-Y. Zhou and the Hong Kong Polytechnic University are sincerely thanked for helping to collect the X-ray data.
supplementary crystallographic information
Comment
In connection with on-going studies into N-substituted benzamides (Saeed et al., 2011a,b), we recently determined the crystal structure of 3,5-dinitro-N-(1,3-thiazol-2-yl)-benzamide monohydrate (Saeed et al., 2011a). In this paper we present the crystal structure of the title compound (I), Fig. 1.
Intermolecular N1—H1N···O1 hydrogen bonds link the molecules into 1-D chains running along [101], Table 1 and Fig. 2. The dihedral angle between the two phenyl ring planes is 5.9 (1)°. Both nitro groups are slightly twisted, 3.3 (2)° and 4.6 (2)°, respectively, from the benzene ring plane, C2—C7. There are also weak π–π interactions between neighbouring molecules, Table 2.
Experimental
To a 250 ml round flask fitted with a condenser was added ethyl 4-bromoaniline (0.1 mol), dichloromethane (15 ml) and triethylamine(0.5 ml) with magnetic stirring. 3,5-Dinitrobenzoyl chloride (0.1 mol) was added gradually. The reaction mixture was stirred at room temperature for 1 h and then refluxed for 2 h. The product precipitated as a colourless powder, which was washed three times with water and dichloromethane. Recrystallization from ethyl acetate produced the crystals of the title compound.
Refinement
All of the C-bound H atoms are observable in a difference Fourier map but were placed at geometrical positions with C—H = 0.93 Å, and with Uiso(H) = 1.2Ueq(Carrier). The N-bound H-atoms were located from difference Fourier map and refined isotropically.
Figures
Fig. 1.
The title molecule showing at the 50% probability displacement ellipsoids and the atom numbering scheme.
Fig. 2.
The packing diagram projected down the a axis of the compound showing 50% probability displacement ellipsoids. The cyan dotted lines indicate N—H···O hydrogen bonding interactions.
Crystal data
| C13H8BrN3O5 | F(000) = 728 |
| Mr = 366.13 | Dx = 1.732 Mg m−3 |
| Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2yn | Cell parameters from 18250 reflections |
| a = 7.1273 (2) Å | θ = 2.9–25.0° |
| b = 26.6676 (7) Å | µ = 2.96 mm−1 |
| c = 7.5428 (2) Å | T = 296 K |
| β = 101.652 (2)° | Block, colourless |
| V = 1404.10 (7) Å3 | 0.56 × 0.34 × 0.30 mm |
| Z = 4 |
Data collection
| Bruker APEXII CCD diffractometer | 2476 independent reflections |
| Radiation source: fine-focus sealed tube | 2007 reflections with I > 2σ(I) |
| graphite | Rint = 0.060 |
| ω and φ scan | θmax = 25.0°, θmin = 2.9° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −8→8 |
| Tmin = 0.288, Tmax = 0.471 | k = −31→31 |
| 18250 measured reflections | l = −8→8 |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.035 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.108 | w = 1/[σ2(Fo2) + (0.0472P)2 + 0.9282P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.10 | (Δ/σ)max < 0.001 |
| 2476 reflections | Δρmax = 0.25 e Å−3 |
| 204 parameters | Δρmin = −0.46 e Å−3 |
| 0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0074 (12) |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Br1 | 0.80856 (6) | 0.046874 (16) | 0.25109 (7) | 0.0884 (2) | |
| O1 | 0.6333 (3) | 0.28369 (8) | 0.5032 (3) | 0.0569 (6) | |
| O2 | 0.9867 (5) | 0.31665 (12) | 1.3107 (3) | 0.0879 (9) | |
| O3 | 0.9761 (6) | 0.39563 (13) | 1.3387 (4) | 0.1162 (14) | |
| O4 | 0.8205 (5) | 0.50043 (9) | 0.8040 (5) | 0.0986 (10) | |
| O5 | 0.7279 (6) | 0.46522 (10) | 0.5447 (5) | 0.0967 (11) | |
| N1 | 0.8777 (3) | 0.24105 (8) | 0.6787 (3) | 0.0395 (6) | |
| N2 | 0.9563 (5) | 0.35817 (13) | 1.2475 (4) | 0.0651 (9) | |
| N3 | 0.7853 (5) | 0.46389 (11) | 0.7070 (6) | 0.0655 (9) | |
| C1 | 0.7638 (4) | 0.28096 (10) | 0.6368 (4) | 0.0393 (6) | |
| C2 | 0.8027 (3) | 0.32503 (10) | 0.7622 (4) | 0.0341 (6) | |
| C3 | 0.8632 (4) | 0.32045 (10) | 0.9473 (4) | 0.0362 (6) | |
| H3 | 0.8834 | 0.2890 | 1.0013 | 0.043* | |
| C4 | 0.8932 (4) | 0.36369 (11) | 1.0508 (4) | 0.0430 (7) | |
| C5 | 0.8704 (4) | 0.41094 (11) | 0.9800 (4) | 0.0487 (8) | |
| H5 | 0.8934 | 0.4394 | 1.0524 | 0.058* | |
| C6 | 0.8110 (4) | 0.41394 (10) | 0.7935 (5) | 0.0456 (7) | |
| C7 | 0.7736 (4) | 0.37237 (10) | 0.6849 (4) | 0.0405 (6) | |
| H7 | 0.7293 | 0.3759 | 0.5608 | 0.049* | |
| C8 | 0.8647 (4) | 0.19583 (10) | 0.5760 (4) | 0.0392 (6) | |
| C9 | 0.8261 (4) | 0.19669 (12) | 0.3885 (4) | 0.0488 (7) | |
| H9 | 0.8107 | 0.2271 | 0.3268 | 0.059* | |
| C10 | 0.8108 (5) | 0.15204 (15) | 0.2943 (5) | 0.0580 (9) | |
| H10 | 0.7828 | 0.1522 | 0.1685 | 0.070* | |
| C11 | 0.8370 (4) | 0.10718 (13) | 0.3874 (5) | 0.0576 (9) | |
| C12 | 0.8826 (5) | 0.10586 (12) | 0.5729 (5) | 0.0561 (8) | |
| H12 | 0.9045 | 0.0754 | 0.6338 | 0.067* | |
| C13 | 0.8955 (4) | 0.15065 (11) | 0.6683 (4) | 0.0481 (8) | |
| H13 | 0.9247 | 0.1504 | 0.7942 | 0.058* | |
| H1N | 0.958 (4) | 0.2412 (10) | 0.792 (4) | 0.035 (7)* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Br1 | 0.0662 (3) | 0.0737 (3) | 0.1252 (5) | −0.01117 (19) | 0.0187 (3) | −0.0669 (3) |
| O1 | 0.0609 (13) | 0.0435 (11) | 0.0499 (13) | 0.0067 (10) | −0.0278 (11) | −0.0061 (10) |
| O2 | 0.134 (3) | 0.084 (2) | 0.0409 (14) | −0.0258 (18) | 0.0057 (15) | 0.0037 (14) |
| O3 | 0.205 (4) | 0.095 (2) | 0.0539 (16) | −0.049 (2) | 0.038 (2) | −0.0396 (17) |
| O4 | 0.105 (2) | 0.0269 (13) | 0.161 (3) | −0.0038 (13) | 0.020 (2) | −0.0076 (16) |
| O5 | 0.133 (3) | 0.0518 (16) | 0.104 (3) | 0.0173 (17) | 0.022 (2) | 0.0374 (16) |
| N1 | 0.0429 (13) | 0.0309 (12) | 0.0361 (13) | 0.0010 (10) | −0.0123 (11) | −0.0037 (10) |
| N2 | 0.089 (2) | 0.070 (2) | 0.0407 (16) | −0.0319 (17) | 0.0224 (15) | −0.0123 (15) |
| N3 | 0.0619 (19) | 0.0326 (15) | 0.104 (3) | 0.0066 (13) | 0.0229 (18) | 0.0138 (16) |
| C1 | 0.0383 (15) | 0.0335 (14) | 0.0394 (15) | −0.0015 (11) | −0.0079 (12) | 0.0023 (12) |
| C2 | 0.0309 (14) | 0.0294 (13) | 0.0381 (15) | 0.0005 (10) | −0.0024 (11) | 0.0013 (11) |
| C3 | 0.0344 (14) | 0.0323 (13) | 0.0394 (15) | −0.0027 (11) | 0.0016 (11) | 0.0020 (11) |
| C4 | 0.0448 (16) | 0.0465 (16) | 0.0389 (16) | −0.0090 (13) | 0.0116 (13) | −0.0087 (13) |
| C5 | 0.0530 (18) | 0.0356 (15) | 0.060 (2) | −0.0102 (13) | 0.0159 (15) | −0.0130 (14) |
| C6 | 0.0410 (16) | 0.0261 (14) | 0.071 (2) | 0.0006 (11) | 0.0144 (15) | 0.0024 (13) |
| C7 | 0.0370 (15) | 0.0359 (15) | 0.0447 (16) | 0.0038 (12) | −0.0012 (12) | 0.0058 (13) |
| C8 | 0.0331 (14) | 0.0350 (14) | 0.0440 (16) | −0.0016 (11) | −0.0051 (11) | −0.0108 (12) |
| C9 | 0.0471 (17) | 0.0522 (18) | 0.0446 (18) | −0.0024 (14) | 0.0035 (13) | −0.0088 (14) |
| C10 | 0.0495 (19) | 0.075 (2) | 0.0485 (19) | −0.0023 (16) | 0.0085 (15) | −0.0248 (18) |
| C11 | 0.0373 (17) | 0.057 (2) | 0.077 (2) | −0.0065 (14) | 0.0087 (16) | −0.0346 (18) |
| C12 | 0.0495 (19) | 0.0402 (16) | 0.075 (2) | −0.0007 (14) | 0.0032 (16) | −0.0147 (16) |
| C13 | 0.0492 (17) | 0.0358 (15) | 0.0517 (18) | 0.0011 (13) | −0.0077 (14) | −0.0076 (13) |
Geometric parameters (Å, °)
| Br1—C11 | 1.898 (3) | C4—C5 | 1.366 (4) |
| O1—C1 | 1.228 (3) | C5—C6 | 1.387 (5) |
| O2—N2 | 1.208 (4) | C5—H5 | 0.9300 |
| O3—N2 | 1.205 (4) | C6—C7 | 1.372 (4) |
| O4—N3 | 1.214 (4) | C7—H7 | 0.9300 |
| O5—N3 | 1.211 (5) | C8—C9 | 1.385 (4) |
| N1—C1 | 1.337 (4) | C8—C13 | 1.387 (4) |
| N1—C8 | 1.426 (3) | C9—C10 | 1.380 (5) |
| N1—H1N | 0.93 (3) | C9—H9 | 0.9300 |
| N2—C4 | 1.468 (4) | C10—C11 | 1.381 (5) |
| N3—C6 | 1.478 (4) | C10—H10 | 0.9300 |
| C1—C2 | 1.499 (4) | C11—C12 | 1.371 (5) |
| C2—C3 | 1.381 (4) | C12—C13 | 1.388 (4) |
| C2—C7 | 1.388 (4) | C12—H12 | 0.9300 |
| C3—C4 | 1.385 (4) | C13—H13 | 0.9300 |
| C3—H3 | 0.9300 | ||
| C1—N1—C8 | 125.1 (2) | C7—C6—C5 | 122.8 (3) |
| C1—N1—H1N | 116.5 (17) | C7—C6—N3 | 118.2 (3) |
| C8—N1—H1N | 117.7 (17) | C5—C6—N3 | 119.0 (3) |
| O3—N2—O2 | 123.0 (3) | C6—C7—C2 | 119.3 (3) |
| O3—N2—C4 | 118.1 (3) | C6—C7—H7 | 120.3 |
| O2—N2—C4 | 119.0 (3) | C2—C7—H7 | 120.3 |
| O5—N3—O4 | 124.9 (3) | C9—C8—C13 | 120.4 (3) |
| O5—N3—C6 | 117.3 (3) | C9—C8—N1 | 121.2 (3) |
| O4—N3—C6 | 117.7 (4) | C13—C8—N1 | 118.4 (3) |
| O1—C1—N1 | 124.4 (3) | C10—C9—C8 | 119.4 (3) |
| O1—C1—C2 | 118.9 (2) | C10—C9—H9 | 120.3 |
| N1—C1—C2 | 116.7 (2) | C8—C9—H9 | 120.3 |
| C3—C2—C7 | 119.6 (2) | C9—C10—C11 | 119.8 (3) |
| C3—C2—C1 | 123.3 (2) | C9—C10—H10 | 120.1 |
| C7—C2—C1 | 117.1 (2) | C11—C10—H10 | 120.1 |
| C2—C3—C4 | 118.5 (2) | C12—C11—C10 | 121.4 (3) |
| C2—C3—H3 | 120.7 | C12—C11—Br1 | 120.6 (3) |
| C4—C3—H3 | 120.7 | C10—C11—Br1 | 118.0 (3) |
| C5—C4—C3 | 123.7 (3) | C11—C12—C13 | 118.9 (3) |
| C5—C4—N2 | 118.4 (3) | C11—C12—H12 | 120.5 |
| C3—C4—N2 | 117.8 (3) | C13—C12—H12 | 120.5 |
| C4—C5—C6 | 116.0 (3) | C8—C13—C12 | 120.0 (3) |
| C4—C5—H5 | 122.0 | C8—C13—H13 | 120.0 |
| C6—C5—H5 | 122.0 | C12—C13—H13 | 120.0 |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1N···O1i | 0.93 (3) | 1.93 (3) | 2.818 (3) | 159 (3) |
Symmetry codes: (i) x+1/2, −y+1/2, z+1/2.
Table 2 Table 2. π–π interactions (Å, °) Cg1 and Cg2 are centroids of the rings C2-C7 and C8-C13 respectively, CgI···CgJ is the distance between ring centroids. The dihedral angle is that between the planes of the rings I and J. CgI_Perp is the perpendicular distance of CgI from ring J. CgJ_Perp is the perpendicular distance of CgJ from ring I.
| I | J | CgI···CgJ | Dihedral angle | CgI_Perp | CgJ_Perp |
| 1 | 2i | 3.7391 (17) | 6.24 (14) | 3.5945 (11) | -3.6827 (13) |
| 1 | 2ii | 3.6467 (17) | 6.24 (14) | -3.5254 (12) | 3.4038 (13) |
symmetry operators: i: -1/2+x, 1/2-y, 1/2+z ii: 1/2+x, 1/2-y, 1/2+z
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: TK5029).
References
- Bruker (2007). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
- Macrae, C. F., Bruno, I. J., Chisholm, J. A., Edgington, P. R., McCabe, P., Pidcock, E., Rodriguez-Monge, L., Taylor, R., van de Streek, J. & Wood, P. A. (2008). J. Appl. Cryst. 41, 466–470.
- Saeed, S., Jasinski, J. P. & Butcher, R. J. (2011a). Acta Cryst. E67, o279. [DOI] [PMC free article] [PubMed]
- Saeed, S., Rashid, N., Ng, S. W. & Tiekink, E. R. T. (2011b). Acta Cryst. E67, o1194. [DOI] [PMC free article] [PubMed]
- Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811051464/tk5029sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811051464/tk5029Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811051464/tk5029Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


