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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Dec 10;68(Pt 1):o96. doi: 10.1107/S1600536811052792

3-(4-Fluoro­phenyl­sulfon­yl)-5-iodo-2,7-dimethyl-1-benzofuran

Pil Ja Seo a, Hong Dae Choi a, Byeng Wha Son b, Uk Lee b,*
PMCID: PMC3254446  PMID: 22259594

Abstract

In the title compound, C16H12FIO3S, the 4-fluoro­phenyl ring makes a dihedral angle of 72.31 (6)° with the mean plane of the benzofuran fragment. In the crystal, mol­ecules are linked by weak C—H⋯O hydrogen bonds, and by an I⋯I contact [3.7764 (3) Å]. The crystal structure also exhibits a weak C—I⋯π [3.901 (3) Å] inter­action and a slipped π–π inter­action between the furan and benzene rings of neighbouring mol­ecules [centroid–centroid distance = 3.845 (3), inter­planar distance = 3.555 (3) and slippage = 1.465 (3) Å].

Related literature

For the biological activity of benzofuran compounds, see: Aslam et al. (2009); Galal et al. (2009); Khan et al. (2005). For natural products with benzofuran rings, see: Akgul & Anil (2003); Soekamto et al. (2003). For related structures, see: Choi et al. (2008, 2011).graphic file with name e-68-00o96-scheme1.jpg

Experimental

Crystal data

  • C16H12FIO3S

  • M r = 430.22

  • Triclinic, Inline graphic

  • a = 7.5839 (2) Å

  • b = 10.2443 (3) Å

  • c = 10.4651 (3) Å

  • α = 79.424 (1)°

  • β = 75.652 (1)°

  • γ = 80.361 (1)°

  • V = 767.94 (4) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 2.24 mm−1

  • T = 173 K

  • 0.32 × 0.30 × 0.18 mm

Data collection

  • Bruker SMART APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2009) T min = 0.534, T max = 0.689

  • 13962 measured reflections

  • 3785 independent reflections

  • 3585 reflections with I > 2σ(I)

  • R int = 0.028

Refinement

  • R[F 2 > 2σ(F 2)] = 0.022

  • wR(F 2) = 0.057

  • S = 1.08

  • 3785 reflections

  • 201 parameters

  • H-atom parameters constrained

  • Δρmax = 0.47 e Å−3

  • Δρmin = −0.72 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811052792/bh2405sup1.cif

e-68-00o96-sup1.cif (23.6KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811052792/bh2405Isup2.hkl

e-68-00o96-Isup2.hkl (185.5KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811052792/bh2405Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C12—H12⋯O3i 0.95 2.54 3.253 (2) 132
C15—H15⋯O2ii 0.95 2.52 3.294 (3) 139

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

supplementary crystallographic information

Comment

Recently, benzofuran derivatives have drawn much attention due to their valuable pharmacological properties such as antibacterial and antifungal, antitumor and antiviral, and antimicrobial activities (Aslam et al., 2009; Galal et al., 2009; Khan et al., 2005). These benzofuran derivatives occur in a wide range of natural products (Akgul & Anil, 2003; Soekamto et al., 2003). As a part of our ongoing study of benzofuran derivatives containing either 3-phenylsulfonyl (Choi et al., 2008) or 3-(4-fluorophenylsulfinyl) (Choi et al., 2011) substituents, we report herein the crystal structure of the title compound.

In the title molecule (Fig. 1), the benzofuran unit is essentially planar, with a mean deviation of 0.007 (2) Å from the least-squares plane defined by the nine constituent atoms. The dihedral angle formed by the 4-fluorophenyl ring and the mean plane of the benzofurn fragment is 72.31 (6)°. The crystal packing (Fig. 2) is stabilized by weak intermolecular C—H···O hydrogen bonds (see Table 1), and by an I···I contact at 3.7764 (3) Å. The crystal packing (Fig. 3) is further stabilized by a weak C—I···π interaction between the iodine and the benzene ring of an adjacent molecule, with a C4—I1···Cg2v [3.901 (3) Å] (Cg2 is the centroid of the C2···C7 benzene ring). The crystal packing (Fig. 3) is also exhibits a weak slipped π–π interaction between the furan and benzene rings of adjacent molecules, with a Cg1···Cg2iv distance of 3.845 (3) Å and an interplanar distance of 3.555 (3) Å resulting in a slippage of 1.465 (3) Å (Cg1 is the centroid of the C1/C2/C7/O1/C8 furan ring).

Experimental

77% 3-chloroperoxybenzoic acid (381 mg, 1.7 mmol) was added in small portions to a stirred solution of 3-(4-fluorophenylsulfanyl)-5-iodo-2,7-dimethyl-1-benzofuran (318 mg, 0.8 mmol) in dichloromethane (30 mL) at 273 K. After being stirred at room temperature for 8 h, the mixture was washed with saturated sodium bicarbonate solution and the organic layer was separated, dried over magnesium sulfate, filtered and concentrated at reduced pressure. The residue was purified by column chromatography (hexane–ethyl acetate, 4:1 v/v) to afford the title compound as a colorless solid [yield 71%, m.p. 430–431 K; Rf = 0.53 (hexane–ethyl acetate, 4:1 v/v)]. Single crystals suitable for X-ray diffraction were prepared by slow evaporation of a solution of the title compound in ethyl acetate at room temperature.

Refinement

All H atoms were positioned geometrically and refined using a riding model, with C—H = 0.95 Å fo the aryl and 0.98 Å for the methylene H atoms. Uiso(H) =1.2Ueq(C) for the aryl and 1.5Ueq(C) for the methyl H atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with displacement ellipsoids at the 50% probability level. H atoms are presented as small spheres of arbitrary radius.

Fig. 2.

Fig. 2.

A view of the C—H···O and I···I interactions (dotted lines) in the crystal structure of the title compound. H atoms non-participating in hydrogen-bonding were omitted for clarity [Symmetry codes: (i) -x+1, -y+1, -z; (ii) -x, -y, -z+2; (iii) -x+1, -y, -z+1].

Fig. 3.

Fig. 3.

A view of the C—I···π and π–π interactions (dotted lines) in the crystal structure of the title compound. H atoms were omitted for clarity [Symmetry codes: (iv) -x, -y+1, -z+1; (v) -x+1, -y+1, -z+1].

Crystal data

C16H12FIO3S Z = 2
Mr = 430.22 F(000) = 420
Triclinic, P1 Dx = 1.861 Mg m3
Hall symbol: -P 1 Melting point: 430 K
a = 7.5839 (2) Å Mo Kα radiation, λ = 0.71073 Å
b = 10.2443 (3) Å Cell parameters from 9929 reflections
c = 10.4651 (3) Å θ = 2.7–28.3°
α = 79.424 (1)° µ = 2.24 mm1
β = 75.652 (1)° T = 173 K
γ = 80.361 (1)° Block, colourless
V = 767.94 (4) Å3 0.32 × 0.30 × 0.18 mm

Data collection

Bruker SMART APEXII CCD diffractometer 3785 independent reflections
Radiation source: rotating anode 3585 reflections with I > 2σ(I)
graphite multilayer Rint = 0.028
Detector resolution: 10.0 pixels mm-1 θmax = 28.3°, θmin = 2.0°
φ and ω scans h = −9→10
Absorption correction: multi-scan (SADABS; Bruker, 2009) k = −13→13
Tmin = 0.534, Tmax = 0.689 l = −13→13
13962 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.022 Hydrogen site location: difference Fourier map
wR(F2) = 0.057 H-atom parameters constrained
S = 1.08 w = 1/[σ2(Fo2) + (0.028P)2 + 0.3904P] where P = (Fo2 + 2Fc2)/3
3785 reflections (Δ/σ)max = 0.001
201 parameters Δρmax = 0.47 e Å3
0 restraints Δρmin = −0.72 e Å3
0 constraints

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
I1 0.458085 (17) 0.514608 (14) 0.182660 (11) 0.03682 (6)
S1 0.09268 (6) 0.13784 (4) 0.70600 (4) 0.02423 (9)
F1 0.7392 (2) −0.17671 (16) 0.86383 (18) 0.0602 (4)
O1 0.07637 (18) 0.50285 (12) 0.77645 (12) 0.0243 (2)
O2 0.1076 (2) 0.12200 (14) 0.56993 (14) 0.0337 (3)
O3 −0.06489 (19) 0.09921 (14) 0.80627 (15) 0.0332 (3)
C1 0.1071 (2) 0.30519 (17) 0.70547 (17) 0.0227 (3)
C2 0.1812 (2) 0.39985 (16) 0.59204 (17) 0.0219 (3)
C3 0.2651 (2) 0.39515 (18) 0.45767 (17) 0.0242 (3)
H3 0.2828 0.3154 0.4195 0.029*
C4 0.3210 (2) 0.51397 (19) 0.38343 (17) 0.0259 (3)
C5 0.2946 (3) 0.63304 (18) 0.43641 (19) 0.0281 (4)
H5 0.3345 0.7114 0.3802 0.034*
C6 0.2110 (3) 0.63949 (17) 0.56963 (19) 0.0261 (3)
C7 0.1583 (2) 0.51938 (17) 0.64268 (17) 0.0226 (3)
C8 0.0489 (2) 0.37130 (17) 0.81325 (18) 0.0242 (3)
C9 0.1834 (3) 0.76435 (19) 0.6319 (2) 0.0358 (4)
H9A 0.2786 0.7597 0.6817 0.054*
H9B 0.0623 0.7723 0.6928 0.054*
H9C 0.1914 0.8425 0.5620 0.054*
C10 −0.0272 (3) 0.3303 (2) 0.95636 (18) 0.0326 (4)
H10A −0.0523 0.2373 0.9712 0.049*
H10B −0.1414 0.3885 0.9853 0.049*
H10C 0.0616 0.3379 1.0077 0.049*
C11 0.2897 (2) 0.04748 (16) 0.75598 (17) 0.0239 (3)
C12 0.2733 (3) −0.02336 (19) 0.88349 (19) 0.0318 (4)
H12 0.1580 −0.0191 0.9453 0.038*
C13 0.4256 (3) −0.1004 (2) 0.9203 (2) 0.0391 (5)
H13 0.4169 −0.1514 1.0067 0.047*
C14 0.5908 (3) −0.1011 (2) 0.8280 (2) 0.0380 (4)
C15 0.6120 (3) −0.0298 (2) 0.7025 (2) 0.0368 (4)
H15 0.7288 −0.0318 0.6425 0.044*
C16 0.4587 (3) 0.0453 (2) 0.66519 (19) 0.0304 (4)
H16 0.4686 0.0951 0.5783 0.037*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
I1 0.03090 (8) 0.05323 (10) 0.02085 (7) −0.00336 (6) −0.00149 (5) 0.00069 (5)
S1 0.0273 (2) 0.02141 (18) 0.0241 (2) −0.00622 (16) −0.00472 (16) −0.00224 (15)
F1 0.0409 (8) 0.0588 (9) 0.0736 (11) 0.0116 (7) −0.0215 (7) 0.0040 (8)
O1 0.0276 (6) 0.0228 (6) 0.0215 (6) −0.0025 (5) −0.0034 (5) −0.0042 (4)
O2 0.0468 (8) 0.0291 (7) 0.0292 (7) −0.0055 (6) −0.0134 (6) −0.0071 (5)
O3 0.0276 (7) 0.0322 (7) 0.0373 (8) −0.0115 (5) −0.0017 (6) 0.0002 (6)
C1 0.0243 (8) 0.0213 (7) 0.0219 (8) −0.0038 (6) −0.0043 (6) −0.0018 (6)
C2 0.0204 (8) 0.0220 (7) 0.0225 (8) −0.0020 (6) −0.0046 (6) −0.0024 (6)
C3 0.0237 (8) 0.0260 (8) 0.0221 (8) −0.0020 (6) −0.0043 (6) −0.0032 (6)
C4 0.0227 (8) 0.0328 (9) 0.0199 (8) −0.0028 (7) −0.0035 (6) −0.0002 (7)
C5 0.0273 (9) 0.0271 (8) 0.0282 (9) −0.0061 (7) −0.0073 (7) 0.0043 (7)
C6 0.0264 (9) 0.0223 (8) 0.0299 (9) −0.0037 (6) −0.0080 (7) −0.0016 (7)
C7 0.0215 (8) 0.0235 (8) 0.0220 (8) −0.0017 (6) −0.0040 (6) −0.0033 (6)
C8 0.0238 (8) 0.0247 (8) 0.0239 (8) −0.0036 (6) −0.0054 (6) −0.0026 (6)
C9 0.0468 (12) 0.0237 (8) 0.0384 (11) −0.0065 (8) −0.0107 (9) −0.0050 (8)
C10 0.0386 (11) 0.0356 (10) 0.0208 (8) −0.0062 (8) −0.0015 (7) −0.0028 (7)
C11 0.0271 (9) 0.0191 (7) 0.0240 (8) −0.0036 (6) −0.0033 (6) −0.0026 (6)
C12 0.0320 (10) 0.0310 (9) 0.0272 (9) −0.0056 (7) −0.0011 (7) 0.0026 (7)
C13 0.0424 (12) 0.0353 (10) 0.0342 (10) −0.0031 (9) −0.0099 (9) 0.0088 (8)
C14 0.0342 (11) 0.0324 (10) 0.0470 (12) 0.0029 (8) −0.0133 (9) −0.0057 (9)
C15 0.0282 (10) 0.0413 (11) 0.0382 (11) −0.0025 (8) −0.0010 (8) −0.0100 (9)
C16 0.0308 (10) 0.0329 (9) 0.0252 (8) −0.0066 (7) −0.0006 (7) −0.0037 (7)

Geometric parameters (Å, °)

I1—C4 2.1000 (17) C6—C9 1.501 (3)
I1—I1i 3.7764 (3) C8—C10 1.475 (2)
S1—O2 1.4372 (14) C9—H9A 0.9800
S1—O3 1.4388 (14) C9—H9B 0.9800
S1—C1 1.7349 (17) C9—H9C 0.9800
S1—C11 1.7633 (19) C10—H10A 0.9800
F1—C14 1.348 (3) C10—H10B 0.9800
O1—C8 1.368 (2) C10—H10C 0.9800
O1—C7 1.375 (2) C11—C12 1.384 (3)
C1—C8 1.364 (2) C11—C16 1.393 (2)
C1—C2 1.447 (2) C12—C13 1.382 (3)
C2—C7 1.390 (2) C12—H12 0.9500
C2—C3 1.398 (2) C13—C14 1.379 (3)
C3—C4 1.388 (2) C13—H13 0.9500
C3—H3 0.9500 C14—C15 1.367 (3)
C4—C5 1.395 (3) C15—C16 1.382 (3)
C5—C6 1.390 (3) C15—H15 0.9500
C5—H5 0.9500 C16—H16 0.9500
C6—C7 1.388 (2)
C4—I1—I1i 159.65 (5) O1—C8—C10 115.71 (15)
O2—S1—O3 119.47 (9) C6—C9—H9A 109.5
O2—S1—C1 106.66 (8) C6—C9—H9B 109.5
O3—S1—C1 108.80 (8) H9A—C9—H9B 109.5
O2—S1—C11 107.68 (9) C6—C9—H9C 109.5
O3—S1—C11 107.59 (9) H9A—C9—H9C 109.5
C1—S1—C11 105.89 (8) H9B—C9—H9C 109.5
C8—O1—C7 107.10 (13) C8—C10—H10A 109.5
C8—C1—C2 107.64 (15) C8—C10—H10B 109.5
C8—C1—S1 125.62 (13) H10A—C10—H10B 109.5
C2—C1—S1 126.74 (13) C8—C10—H10C 109.5
C7—C2—C3 119.58 (16) H10A—C10—H10C 109.5
C7—C2—C1 104.40 (14) H10B—C10—H10C 109.5
C3—C2—C1 136.01 (16) C12—C11—C16 120.97 (18)
C4—C3—C2 116.04 (16) C12—C11—S1 119.54 (14)
C4—C3—H3 122.0 C16—C11—S1 119.47 (14)
C2—C3—H3 122.0 C13—C12—C11 119.60 (18)
C3—C4—C5 123.23 (16) C13—C12—H12 120.2
C3—C4—I1 118.75 (13) C11—C12—H12 120.2
C5—C4—I1 118.01 (13) C14—C13—C12 118.06 (19)
C6—C5—C4 121.44 (16) C14—C13—H13 121.0
C6—C5—H5 119.3 C12—C13—H13 121.0
C4—C5—H5 119.3 F1—C14—C15 118.3 (2)
C7—C6—C5 114.51 (16) F1—C14—C13 118.0 (2)
C7—C6—C9 122.07 (17) C15—C14—C13 123.6 (2)
C5—C6—C9 123.40 (17) C14—C15—C16 118.16 (19)
O1—C7—C6 124.09 (15) C14—C15—H15 120.9
O1—C7—C2 110.72 (14) C16—C15—H15 120.9
C6—C7—C2 125.19 (16) C15—C16—C11 119.55 (19)
C1—C8—O1 110.13 (15) C15—C16—H16 120.2
C1—C8—C10 134.10 (16) C11—C16—H16 120.2
O2—S1—C1—C8 160.36 (16) C3—C2—C7—O1 −178.98 (15)
O3—S1—C1—C8 30.24 (19) C1—C2—C7—O1 −0.15 (19)
C11—S1—C1—C8 −85.14 (18) C3—C2—C7—C6 0.7 (3)
O2—S1—C1—C2 −19.34 (19) C1—C2—C7—C6 179.55 (17)
O3—S1—C1—C2 −149.46 (16) C2—C1—C8—O1 1.5 (2)
C11—S1—C1—C2 95.16 (17) S1—C1—C8—O1 −178.27 (13)
C8—C1—C2—C7 −0.8 (2) C2—C1—C8—C10 −175.6 (2)
S1—C1—C2—C7 178.95 (14) S1—C1—C8—C10 4.7 (3)
C8—C1—C2—C3 177.7 (2) C7—O1—C8—C1 −1.56 (19)
S1—C1—C2—C3 −2.5 (3) C7—O1—C8—C10 176.10 (16)
C7—C2—C3—C4 0.2 (3) O2—S1—C11—C12 −140.80 (15)
C1—C2—C3—C4 −178.18 (19) O3—S1—C11—C12 −10.81 (17)
C2—C3—C4—C5 −0.9 (3) C1—S1—C11—C12 105.39 (16)
C2—C3—C4—I1 177.53 (12) O2—S1—C11—C16 37.34 (17)
I1i—I1—C4—C3 63.4 (2) O3—S1—C11—C16 167.33 (14)
I1i—I1—C4—C5 −118.06 (16) C1—S1—C11—C16 −76.46 (16)
C3—C4—C5—C6 0.8 (3) C16—C11—C12—C13 −1.8 (3)
I1—C4—C5—C6 −177.66 (14) S1—C11—C12—C13 176.32 (16)
C4—C5—C6—C7 0.1 (3) C11—C12—C13—C14 1.4 (3)
C4—C5—C6—C9 178.53 (19) C12—C13—C14—F1 −179.7 (2)
C8—O1—C7—C6 −178.67 (17) C12—C13—C14—C15 0.1 (4)
C8—O1—C7—C2 1.04 (19) F1—C14—C15—C16 178.6 (2)
C5—C6—C7—O1 178.82 (16) C13—C14—C15—C16 −1.2 (3)
C9—C6—C7—O1 0.4 (3) C14—C15—C16—C11 0.8 (3)
C5—C6—C7—C2 −0.8 (3) C12—C11—C16—C15 0.7 (3)
C9—C6—C7—C2 −179.31 (18) S1—C11—C16—C15 −177.42 (15)

Symmetry codes: (i) −x+1, −y+1, −z.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C12—H12···O3ii 0.95 2.54 3.253 (2) 132.
C15—H15···O2iii 0.95 2.52 3.294 (3) 139.

Symmetry codes: (ii) −x, −y, −z+2; (iii) −x+1, −y, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BH2405).

References

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  4. Bruker (2009). APEX2 SADABS and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
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  6. Choi, H. D., Seo, P. J., Son, B. W. & Lee, U. (2011). Acta Cryst. E67, o1082. [DOI] [PMC free article] [PubMed]
  7. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
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  11. Soekamto, N. H., Achmad, S. A., Ghisalberti, E. L., Hakim, E. H. & Syah, Y. M. (2003). Phytochemistry, 64, 831–834. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811052792/bh2405sup1.cif

e-68-00o96-sup1.cif (23.6KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811052792/bh2405Isup2.hkl

e-68-00o96-Isup2.hkl (185.5KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536811052792/bh2405Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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