Abstract
In the title compound, C16H15Br2NO2·CH4O, the mean planes of the substituted cyclohexa-2,5-dien-1-one and phenyl rings are almost parallel [dihedral angle = 7.84 (4)°]. The crystal packing is stabilized by N—H⋯O hydrogen bonds generating infinite [101] chains. The methanol solvent molecules are connected with the main species by O—H⋯O interactions.
Related literature
For background to bromophenols and their bioactivity, see: Liu et al. (2011 ▶). For related structures, see: Palmer et al. (1973 ▶); Li et al. (1995 ▶); Huang et al. (2006 ▶). For structural and theoretical aspects on the keto-enol equilibrium of salicylaldehyde Schiff bases, see: Chatziefthimiou et al. (2006 ▶).
Experimental
Crystal data
C16H15Br2NO2·CH4O
M r = 445.15
Monoclinic,
a = 8.752 (6) Å
b = 16.308 (10) Å
c = 13.001 (8) Å
β = 104.047 (6)°
V = 1800 (2) Å3
Z = 4
Mo Kα radiation
μ = 4.52 mm−1
T = 296 K
0.25 × 0.22 × 0.20 mm
Data collection
Bruker APEXII CCD diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.337, T max = 0.406
8282 measured reflections
3292 independent reflections
1674 reflections with I > 2σ(I)
R int = 0.072
Refinement
R[F 2 > 2σ(F 2)] = 0.051
wR(F 2) = 0.133
S = 1.00
3292 reflections
211 parameters
H-atom parameters constrained
Δρmax = 0.62 e Å−3
Δρmin = −0.60 e Å−3
Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811052895/zq2143sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811052895/zq2143Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811052895/zq2143Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
---|---|---|---|---|
N1—H1⋯O1i | 0.86 | 1.93 | 2.731 (7) | 154 |
O3—H3⋯O1ii | 0.82 | 2.05 | 2.786 (8) | 150 |
Symmetry codes: (i) ; (ii)
.
Acknowledgments
This project was sponsored by the ShanDong Province Science & Technology Innovation Foundation (People’s Republic of China).
supplementary crystallographic information
Comment
The 2,3-dibromo-4-hydroxy-5-methoxybenzaldehyde acts as an important precursor for the synthesis of bromophenols, which have been reported to possess a variety of biological activities (Liu et al., 2011). As an extension of our work on the 2,3-dibromo-4-hydroxy-5-methoxybenzaldehyde, the title compound was synthesized by condensing 2,3-dibromo-4-hydroxy-5-methoxybenzaldehyde with phenethylamine, and attempts to investigate its biological activities were carried out.
In the crystal structure of the title compound, C16H15Br2NO2.CH4O, the mean planes of the substituted cyclohexa-2,5-dien-1-one and phenyl rings are almost parallel [dihedral angle = 7.84 (4)°]. Difference Fourier maps clearly showed that the N1 atom is protonated rather than the O1 atom indicating a methylidenecyclohexa-2,5-dien-1-one skeleton (Palmer et al., 1973; Huang et al., 2006; Chatziefthimiou et al., 2006). The N1 and O1 atoms are connected via a short intermolecular N—H···O hydrogen bond [N1···O1i = 2.731 (7) Å; (i) = x - 1/2, -y + 3/2, z - 1/2] generating infinite one-dimensional [101] chains (Chatziefthimiou et al., 2006). The solvent molecules of methanol are connected with the main species by O3—H3···O1ii interactions [O3···O1ii = 2.786 (8) Å; (ii) = x - 1, y, z].
Experimental
2,3-Dibromo-4-hydroxy-5-methoxybenzaldehyde (0.31 g) and phenethylamine (0.12 g) were dissolved in methanol (20 ml). The mixture was stirred at room temperature for 30 min to give a clear solution. Keeping the solution in air for 5 days, yellow block-shaped single crystals suitable for X-ray diffraction analysis were obtained at the bottom of the vessel.
Refinement
All H atoms were placed in geometrical positions and constrained to ride on their parent atoms, with C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C) for aromatic H atoms, with C—H = 0.97 Å and Uiso(H) = 1.2Ueq(C) for methylene H atoms, with C—H = 0.96 Å and Uiso(H) = 1.5Ueq(C) for methyl H atoms, and with N—H = 0.86 Å and Uiso(H) = 1.2Ueq(C) for the amino H atom.
Figures
Fig. 1.
Molecular structure of the title compound. Displacement ellipsoids are drawn at the 30% probability level.
Fig. 2.
Different views of the crystal packing showing N–H···O and O–H···O hydrogen bonds (dashed lines).
Crystal data
C16H15Br2NO2·CH4O | Z = 4 |
Mr = 445.15 | F(000) = 888 |
Monoclinic, P21/n | Dx = 1.643 Mg m−3 |
Hall symbol: -P 2yn | Mo Kα radiation, λ = 0.71073 Å |
a = 8.752 (6) Å | µ = 4.52 mm−1 |
b = 16.308 (10) Å | T = 296 K |
c = 13.001 (8) Å | Block, yellow |
β = 104.047 (6)° | 0.25 × 0.22 × 0.20 mm |
V = 1800 (2) Å3 |
Data collection
Bruker APEXII CCD diffractometer | 3292 independent reflections |
Radiation source: fine-focus sealed tube | 1674 reflections with I > 2σ(I) |
graphite | Rint = 0.072 |
φ and ω scans | θmax = 25.5°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | h = −10→10 |
Tmin = 0.337, Tmax = 0.406 | k = −19→14 |
8282 measured reflections | l = −12→15 |
Refinement
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.051 | H-atom parameters constrained |
wR(F2) = 0.133 | w = 1/[σ2(Fo2) + (0.0388P)2 + 2.4528P] where P = (Fo2 + 2Fc2)/3 |
S = 1.00 | (Δ/σ)max = 0.001 |
3292 reflections | Δρmax = 0.62 e Å−3 |
211 parameters | Δρmin = −0.60 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008) |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0103 (10) |
Special details
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
x | y | z | Uiso*/Ueq | ||
Br1 | 0.50517 (10) | 0.54245 (5) | 0.37790 (6) | 0.0638 (3) | |
Br2 | 0.78645 (10) | 0.65471 (6) | 0.52622 (6) | 0.0728 (3) | |
O1 | 0.9067 (5) | 0.7788 (3) | 0.3957 (3) | 0.0515 (13) | |
O2 | 0.8183 (6) | 0.8146 (3) | 0.1919 (3) | 0.0544 (13) | |
O3 | 0.1533 (9) | 0.8797 (5) | 0.3731 (6) | 0.129 (3) | |
H3 | 0.1090 | 0.8384 | 0.3873 | 0.193* | |
N1 | 0.3484 (6) | 0.6175 (3) | 0.0466 (4) | 0.0429 (15) | |
H1 | 0.3848 | 0.6572 | 0.0162 | 0.051* | |
C1 | 0.5918 (7) | 0.6306 (4) | 0.3183 (5) | 0.0401 (17) | |
C2 | 0.7125 (8) | 0.6750 (4) | 0.3797 (5) | 0.0404 (17) | |
C3 | 0.7919 (8) | 0.7392 (4) | 0.3400 (5) | 0.0373 (16) | |
C4 | 0.7342 (7) | 0.7544 (4) | 0.2277 (5) | 0.0363 (16) | |
C5 | 0.6117 (7) | 0.7126 (4) | 0.1670 (5) | 0.0385 (17) | |
H5 | 0.5764 | 0.7260 | 0.0956 | 0.046* | |
C6 | 0.5359 (7) | 0.6489 (4) | 0.2093 (5) | 0.0347 (16) | |
C7 | 0.4111 (7) | 0.6048 (4) | 0.1455 (5) | 0.0375 (16) | |
H7 | 0.3694 | 0.5623 | 0.1778 | 0.045* | |
C8 | 0.2192 (8) | 0.5689 (5) | −0.0177 (5) | 0.054 (2) | |
H8A | 0.1369 | 0.6054 | −0.0553 | 0.065* | |
H8B | 0.1749 | 0.5342 | 0.0283 | 0.065* | |
C9 | 0.2756 (8) | 0.5160 (5) | −0.0969 (6) | 0.061 (2) | |
H9A | 0.3238 | 0.5506 | −0.1410 | 0.074* | |
H9B | 0.3551 | 0.4781 | −0.0591 | 0.074* | |
C10 | 0.1429 (8) | 0.4687 (5) | −0.1657 (6) | 0.0500 (19) | |
C11 | 0.0749 (9) | 0.4913 (5) | −0.2688 (6) | 0.061 (2) | |
H11 | 0.1126 | 0.5374 | −0.2968 | 0.074* | |
C12 | −0.0470 (10) | 0.4476 (6) | −0.3314 (7) | 0.080 (3) | |
H12 | −0.0906 | 0.4644 | −0.4007 | 0.096* | |
C13 | −0.1036 (10) | 0.3802 (6) | −0.2923 (7) | 0.070 (3) | |
H13 | −0.1845 | 0.3497 | −0.3348 | 0.084* | |
C14 | −0.0414 (9) | 0.3580 (5) | −0.1913 (7) | 0.067 (2) | |
H14 | −0.0813 | 0.3124 | −0.1636 | 0.080* | |
C15 | 0.0808 (8) | 0.4018 (5) | −0.1279 (6) | 0.055 (2) | |
H15 | 0.1215 | 0.3854 | −0.0581 | 0.066* | |
C17 | 0.2388 (12) | 0.8606 (7) | 0.3029 (8) | 0.108 (4) | |
H17A | 0.3099 | 0.9047 | 0.2992 | 0.162* | |
H17B | 0.1695 | 0.8520 | 0.2342 | 0.162* | |
H17C | 0.2979 | 0.8115 | 0.3254 | 0.162* | |
C16 | 0.7803 (10) | 0.8284 (5) | 0.0801 (6) | 0.075 (3) | |
H16A | 0.7963 | 0.7788 | 0.0444 | 0.112* | |
H16B | 0.8468 | 0.8708 | 0.0639 | 0.112* | |
H16C | 0.6721 | 0.8449 | 0.0568 | 0.112* |
Atomic displacement parameters (Å2)
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.0743 (6) | 0.0668 (6) | 0.0470 (5) | −0.0142 (5) | 0.0082 (4) | 0.0219 (4) |
Br2 | 0.0894 (7) | 0.0934 (7) | 0.0260 (4) | −0.0155 (5) | −0.0043 (4) | 0.0126 (4) |
O1 | 0.059 (3) | 0.059 (3) | 0.031 (3) | −0.010 (3) | 0.001 (2) | −0.010 (2) |
O2 | 0.072 (3) | 0.058 (3) | 0.031 (3) | −0.023 (3) | 0.008 (3) | −0.003 (2) |
O3 | 0.127 (6) | 0.181 (8) | 0.090 (5) | −0.085 (6) | 0.049 (5) | −0.052 (6) |
N1 | 0.047 (3) | 0.048 (4) | 0.029 (3) | −0.004 (3) | 0.001 (3) | −0.001 (3) |
C1 | 0.039 (4) | 0.047 (4) | 0.033 (4) | 0.008 (3) | 0.008 (3) | 0.006 (3) |
C2 | 0.051 (4) | 0.046 (4) | 0.023 (3) | 0.007 (4) | 0.006 (3) | 0.003 (3) |
C3 | 0.042 (4) | 0.041 (4) | 0.028 (4) | 0.003 (3) | 0.007 (3) | −0.006 (3) |
C4 | 0.043 (4) | 0.038 (4) | 0.029 (4) | −0.001 (3) | 0.012 (3) | 0.001 (3) |
C5 | 0.041 (4) | 0.048 (4) | 0.022 (3) | 0.003 (3) | −0.001 (3) | 0.001 (3) |
C6 | 0.036 (4) | 0.038 (4) | 0.029 (4) | 0.002 (3) | 0.006 (3) | 0.000 (3) |
C7 | 0.043 (4) | 0.040 (4) | 0.031 (4) | 0.002 (3) | 0.011 (3) | 0.002 (3) |
C8 | 0.051 (4) | 0.067 (5) | 0.042 (4) | −0.008 (4) | 0.009 (4) | −0.009 (4) |
C9 | 0.047 (5) | 0.081 (6) | 0.057 (5) | −0.012 (4) | 0.014 (4) | −0.024 (4) |
C10 | 0.040 (4) | 0.057 (5) | 0.051 (5) | 0.001 (4) | 0.007 (4) | −0.020 (4) |
C11 | 0.076 (6) | 0.060 (5) | 0.046 (5) | −0.005 (5) | 0.012 (5) | −0.008 (4) |
C12 | 0.085 (7) | 0.089 (7) | 0.052 (5) | 0.006 (6) | −0.008 (5) | −0.019 (5) |
C13 | 0.060 (6) | 0.070 (6) | 0.073 (7) | 0.001 (5) | 0.004 (5) | −0.033 (5) |
C14 | 0.062 (5) | 0.062 (6) | 0.080 (7) | −0.007 (4) | 0.022 (5) | −0.018 (5) |
C15 | 0.055 (5) | 0.060 (5) | 0.048 (5) | −0.006 (4) | 0.010 (4) | −0.009 (4) |
C17 | 0.111 (9) | 0.129 (9) | 0.095 (8) | −0.031 (7) | 0.048 (7) | −0.020 (7) |
C16 | 0.096 (7) | 0.081 (6) | 0.043 (5) | −0.031 (5) | 0.010 (5) | 0.012 (4) |
Geometric parameters (Å, °)
Br1—C1 | 1.878 (7) | C8—H8B | 0.9700 |
Br2—C2 | 1.886 (6) | C9—C10 | 1.497 (9) |
O1—C3 | 1.263 (7) | C9—H9A | 0.9700 |
O2—C4 | 1.374 (7) | C9—H9B | 0.9700 |
O2—C16 | 1.428 (8) | C10—C15 | 1.363 (10) |
O3—C17 | 1.350 (10) | C10—C11 | 1.377 (9) |
O3—H3 | 0.8200 | C11—C12 | 1.373 (10) |
N1—C7 | 1.286 (7) | C11—H11 | 0.9300 |
N1—C8 | 1.465 (8) | C12—C13 | 1.355 (11) |
N1—H1 | 0.8600 | C12—H12 | 0.9300 |
C1—C2 | 1.366 (9) | C13—C14 | 1.344 (11) |
C1—C6 | 1.414 (8) | C13—H13 | 0.9300 |
C2—C3 | 1.422 (9) | C14—C15 | 1.380 (10) |
C3—C4 | 1.445 (8) | C14—H14 | 0.9300 |
C4—C5 | 1.352 (8) | C15—H15 | 0.9300 |
C5—C6 | 1.414 (8) | C17—H17A | 0.9600 |
C5—H5 | 0.9300 | C17—H17B | 0.9600 |
C6—C7 | 1.399 (8) | C17—H17C | 0.9600 |
C7—H7 | 0.9300 | C16—H16A | 0.9600 |
C8—C9 | 1.514 (9) | C16—H16B | 0.9600 |
C8—H8A | 0.9700 | C16—H16C | 0.9600 |
C4—O2—C16 | 116.5 (5) | C8—C9—H9A | 109.3 |
C17—O3—H3 | 109.5 | C10—C9—H9B | 109.3 |
C7—N1—C8 | 124.5 (6) | C8—C9—H9B | 109.3 |
C7—N1—H1 | 117.7 | H9A—C9—H9B | 108.0 |
C8—N1—H1 | 117.7 | C15—C10—C11 | 116.6 (7) |
C2—C1—C6 | 120.3 (6) | C15—C10—C9 | 121.1 (7) |
C2—C1—Br1 | 119.8 (5) | C11—C10—C9 | 122.3 (7) |
C6—C1—Br1 | 119.9 (5) | C12—C11—C10 | 121.9 (8) |
C1—C2—C3 | 123.7 (6) | C12—C11—H11 | 119.0 |
C1—C2—Br2 | 121.6 (5) | C10—C11—H11 | 119.0 |
C3—C2—Br2 | 114.7 (5) | C13—C12—C11 | 120.0 (8) |
O1—C3—C2 | 124.0 (6) | C13—C12—H12 | 120.0 |
O1—C3—C4 | 121.7 (6) | C11—C12—H12 | 120.0 |
C2—C3—C4 | 114.3 (6) | C14—C13—C12 | 119.1 (8) |
C5—C4—O2 | 125.2 (6) | C14—C13—H13 | 120.4 |
C5—C4—C3 | 122.5 (6) | C12—C13—H13 | 120.4 |
O2—C4—C3 | 112.3 (5) | C13—C14—C15 | 121.0 (8) |
C4—C5—C6 | 121.6 (6) | C13—C14—H14 | 119.5 |
C4—C5—H5 | 119.2 | C15—C14—H14 | 119.5 |
C6—C5—H5 | 119.2 | C10—C15—C14 | 121.2 (7) |
C7—C6—C5 | 121.3 (6) | C10—C15—H15 | 119.4 |
C7—C6—C1 | 121.1 (6) | C14—C15—H15 | 119.4 |
C5—C6—C1 | 117.6 (6) | O3—C17—H17A | 109.5 |
N1—C7—C6 | 126.3 (6) | O3—C17—H17B | 109.5 |
N1—C7—H7 | 116.9 | H17A—C17—H17B | 109.5 |
C6—C7—H7 | 116.9 | O3—C17—H17C | 109.5 |
N1—C8—C9 | 111.2 (6) | H17A—C17—H17C | 109.5 |
N1—C8—H8A | 109.4 | H17B—C17—H17C | 109.5 |
C9—C8—H8A | 109.4 | O2—C16—H16A | 109.5 |
N1—C8—H8B | 109.4 | O2—C16—H16B | 109.5 |
C9—C8—H8B | 109.4 | H16A—C16—H16B | 109.5 |
H8A—C8—H8B | 108.0 | O2—C16—H16C | 109.5 |
C10—C9—C8 | 111.5 (6) | H16A—C16—H16C | 109.5 |
C10—C9—H9A | 109.3 | H16B—C16—H16C | 109.5 |
Hydrogen-bond geometry (Å, °)
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1i | 0.86 | 1.93 | 2.731 (7) | 154. |
O3—H3···O1ii | 0.82 | 2.05 | 2.786 (8) | 150. |
Symmetry codes: (i) x−1/2, −y+3/2, z−1/2; (ii) x−1, y, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: ZQ2143).
References
- Bruker (2004). APEX2, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
- Chatziefthimiou, S. D., Lazarou, Y. G., Hadjoudis, E., Dziembowska, T. & Mavridis, I. M. (2006). J. Phys. Chem. B, 110, 23701. [DOI] [PubMed]
- Huang, S.-P., Li, H.-T., Shi, H.-P. & Tan, G.-F. (2006). Acta Cryst. E62, o1541–o1542.
- Li, S., Lundquist, K., Soubbotin, N. & Stomberg, R. (1995). Acta Cryst. C51, 2366–2369.
- Liu, M., Hansen, P. E. & Lin, X. (2011). Mar. Drugs, 9, 1273–1292. [DOI] [PMC free article] [PubMed]
- Palmer, K. J., Wong, R. Y. & Jurd, L. (1973). Acta Cryst. B29, 1509–1514.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811052895/zq2143sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811052895/zq2143Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536811052895/zq2143Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report