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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Dec 23;68(Pt 1):o240. doi: 10.1107/S160053681105447X

5-Bromo-1-(prop-2-en-1-yl)-2,3-dihydro-1H-indole-2,3-dione

Khalil Maamri a, Hafid Zouihri b, El Mokhtar Essassi a, Seik Weng Ng c,d,*
PMCID: PMC3254571  PMID: 22259522

Abstract

In the title compound, C11H8BrNO2, the nine-membered fused-ring is nearly planar [maximum deviation = 0.022 (2) Å] and the allyl group is arched over the nine-membered fused-ring at a dihedral angle of 89.2 (1)°. Weak inter­molecular C—H⋯O hydrogen bonding is present in the crystal structure.

Related literature

For a related mol­ecule, see: Abdel-Hamid et al. (2009).graphic file with name e-68-0o240-scheme1.jpg

Experimental

Crystal data

  • C11H8BrNO2

  • M r = 266.09

  • Orthorhombic, Inline graphic

  • a = 31.3411 (5) Å

  • b = 7.8995 (1) Å

  • c = 8.2716 (1) Å

  • V = 2047.87 (5) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 3.99 mm−1

  • T = 293 K

  • 0.17 × 0.14 × 0.13 mm

Data collection

  • Bruker APEX DUO diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.550, T max = 0.625

  • 50850 measured reflections

  • 2983 independent reflections

  • 2345 reflections with I > 2σ(I)

  • R int = 0.035

Refinement

  • R[F 2 > 2σ(F 2)] = 0.029

  • wR(F 2) = 0.091

  • S = 1.06

  • 2983 reflections

  • 136 parameters

  • H-atom parameters constrained

  • Δρmax = 0.43 e Å−3

  • Δρmin = −0.63 e Å−3

Data collection: APEX2 (Bruker, 2010); cell refinement: SAINT (Bruker, 2010); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681105447X/xu5413sup1.cif

e-68-0o240-sup1.cif (14.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681105447X/xu5413Isup2.hkl

e-68-0o240-Isup2.hkl (146.5KB, hkl)

Supplementary material file. DOI: 10.1107/S160053681105447X/xu5413Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C2—H2⋯O1i 0.93 2.41 3.273 (2) 154
C11—H11A⋯O2ii 0.93 2.46 3.358 (3) 163

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

We thank Université Mohammed V-Agdal and the University of Malaya for supporting this study.

supplementary crystallographic information

Comment

We are interested in the pharmaceutical properites of isatin derivatives; the allyl group 1-(prop-2-en-1-yl)-2,3-dihydro-1H-indole-2,3-dione, whose crystal structure was recently reported (Abdel-Hamid et al., 2009), is a substituent that can undergo a variety of chemical transformation. The bromo-substituted title compound (Scheme I) features a planar fused-ring; the allyl group is arched over the five-membered ring (dihedral angle between allyl plane and nine-membered fused-ring 89.2 (1)°) (Fig. 1).

Experimental

To a solution of 5-bromo-isatin (1g, 4.4 mmole) in N,N-dimethylformamide (50 ml) was added allyl bromide (1.50 g, 12.5 mmol) potassium carbonate (1 g, 7.4 mmol) along with a catalytic quantity of tetra-n-butylammonium bromide. The mixture was stirred for 48 h. The reaction was monitored by thin layer chromatography. The mixture was filtered and the solution evaporated under vacuum. The solid residue was recrystallized from ethanol to afford the title compound as red crystals.

Refinement

Carbon-bound H-atoms were placed in calculated positions (C–H 0.93–0.97 Å) and were included in the refinement in the riding model approximation, with U(H) set to 1.2U(C).

Omitted was the 2 0 0 reflection.

Figures

Fig. 1.

Fig. 1.

Thermal ellipsoid plot (Barbour, 2001) of C11H8BrNO2 at the 50% probability level; hydrogen atoms are drawn as spheres of arbitrary radius.

Crystal data

C11H8BrNO2 F(000) = 1056
Mr = 266.09 Dx = 1.726 Mg m3
Orthorhombic, Pccn Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ab 2ac Cell parameters from 9894 reflections
a = 31.3411 (5) Å θ = 2.6–31.7°
b = 7.8995 (1) Å µ = 3.99 mm1
c = 8.2716 (1) Å T = 293 K
V = 2047.87 (5) Å3 Prism, red
Z = 8 0.17 × 0.14 × 0.13 mm

Data collection

Bruker APEX DUO diffractometer 2983 independent reflections
Radiation source: fine-focus sealed tube 2345 reflections with I > 2σ(I)
graphite Rint = 0.035
ω scans θmax = 30.0°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −44→44
Tmin = 0.550, Tmax = 0.625 k = −6→11
50850 measured reflections l = −11→11

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.091 H-atom parameters constrained
S = 1.06 w = 1/[σ2(Fo2) + (0.0456P)2 + 1.4798P] where P = (Fo2 + 2Fc2)/3
2983 reflections (Δ/σ)max = 0.001
136 parameters Δρmax = 0.43 e Å3
0 restraints Δρmin = −0.63 e Å3

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Br1 0.241206 (6) 0.49599 (3) 0.59089 (3) 0.03615 (9)
O1 0.12709 (5) 0.94850 (17) 0.22127 (18) 0.0334 (3)
O2 0.06568 (4) 0.77943 (19) 0.00288 (18) 0.0360 (3)
N1 0.09810 (5) 0.5408 (2) 0.10576 (18) 0.0237 (3)
C1 0.13156 (5) 0.5079 (2) 0.2140 (2) 0.0204 (3)
C2 0.14721 (6) 0.3526 (2) 0.2635 (2) 0.0253 (3)
H2 0.1358 0.2520 0.2242 0.030*
C3 0.18068 (6) 0.3522 (2) 0.3744 (2) 0.0270 (4)
H3 0.1919 0.2497 0.4098 0.032*
C4 0.19752 (6) 0.5033 (2) 0.4327 (2) 0.0250 (3)
C5 0.18246 (5) 0.6597 (2) 0.3816 (2) 0.0229 (3)
H5 0.1943 0.7602 0.4192 0.027*
C6 0.14914 (5) 0.6589 (2) 0.2724 (2) 0.0200 (3)
C7 0.12453 (5) 0.7978 (2) 0.2011 (2) 0.0229 (3)
C8 0.09146 (5) 0.7101 (2) 0.0887 (2) 0.0256 (4)
C9 0.07183 (6) 0.4118 (2) 0.0275 (2) 0.0295 (4)
H9A 0.0894 0.3138 0.0044 0.035*
H9B 0.0615 0.4560 −0.0748 0.035*
C10 0.03449 (6) 0.3572 (3) 0.1269 (3) 0.0342 (4)
H10 0.0177 0.2706 0.0850 0.041*
C11 0.02314 (7) 0.4189 (3) 0.2666 (3) 0.0379 (5)
H11A 0.0389 0.5057 0.3135 0.046*
H11B −0.0008 0.3762 0.3193 0.046*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Br1 0.02822 (13) 0.04590 (15) 0.03435 (13) 0.00097 (8) −0.00721 (7) 0.00370 (8)
O1 0.0391 (8) 0.0187 (6) 0.0424 (8) 0.0006 (6) 0.0109 (6) 0.0018 (6)
O2 0.0273 (6) 0.0407 (8) 0.0400 (8) 0.0049 (6) −0.0013 (6) 0.0119 (6)
N1 0.0215 (7) 0.0233 (7) 0.0264 (7) −0.0038 (6) −0.0012 (6) −0.0004 (6)
C1 0.0190 (7) 0.0200 (7) 0.0223 (7) −0.0026 (6) 0.0031 (6) −0.0009 (6)
C2 0.0287 (9) 0.0173 (7) 0.0300 (9) −0.0020 (6) 0.0035 (7) −0.0015 (6)
C3 0.0280 (8) 0.0237 (8) 0.0292 (8) 0.0033 (7) 0.0042 (7) 0.0033 (7)
C4 0.0205 (7) 0.0303 (9) 0.0240 (8) −0.0001 (6) 0.0014 (6) 0.0017 (7)
C5 0.0215 (7) 0.0233 (8) 0.0238 (8) −0.0034 (6) 0.0037 (6) −0.0021 (6)
C6 0.0191 (7) 0.0167 (7) 0.0241 (8) −0.0021 (6) 0.0054 (6) −0.0009 (6)
C7 0.0233 (8) 0.0193 (7) 0.0261 (8) −0.0006 (6) 0.0087 (6) 0.0013 (6)
C8 0.0203 (7) 0.0282 (8) 0.0283 (9) −0.0002 (6) 0.0059 (6) 0.0041 (7)
C9 0.0274 (9) 0.0330 (9) 0.0280 (9) −0.0077 (7) −0.0016 (7) −0.0066 (7)
C10 0.0303 (9) 0.0370 (10) 0.0353 (10) −0.0142 (8) −0.0030 (8) −0.0007 (8)
C11 0.0307 (10) 0.0483 (13) 0.0348 (10) −0.0133 (9) 0.0031 (8) 0.0024 (9)

Geometric parameters (Å, °)

Br1—C4 1.8950 (19) C4—C5 1.388 (2)
O1—C7 1.205 (2) C5—C6 1.381 (2)
O2—C8 1.207 (2) C5—H5 0.9300
N1—C8 1.361 (2) C6—C7 1.465 (2)
N1—C1 1.403 (2) C7—C8 1.555 (3)
N1—C9 1.461 (2) C9—C10 1.494 (3)
C1—C2 1.383 (2) C9—H9A 0.9700
C1—C6 1.400 (2) C9—H9B 0.9700
C2—C3 1.393 (3) C10—C11 1.304 (3)
C2—H2 0.9300 C10—H10 0.9300
C3—C4 1.392 (3) C11—H11A 0.9300
C3—H3 0.9300 C11—H11B 0.9300
C8—N1—C1 111.23 (14) C1—C6—C7 107.00 (15)
C8—N1—C9 123.58 (16) O1—C7—C6 130.50 (18)
C1—N1—C9 125.10 (15) O1—C7—C8 124.55 (17)
C2—C1—C6 120.94 (16) C6—C7—C8 104.94 (14)
C2—C1—N1 128.18 (15) O2—C8—N1 127.52 (18)
C6—C1—N1 110.88 (14) O2—C8—C7 126.57 (17)
C1—C2—C3 117.64 (16) N1—C8—C7 105.90 (15)
C1—C2—H2 121.2 N1—C9—C10 113.51 (16)
C3—C2—H2 121.2 N1—C9—H9A 108.9
C2—C3—C4 120.78 (17) C10—C9—H9A 108.9
C2—C3—H3 119.6 N1—C9—H9B 108.9
C4—C3—H3 119.6 C10—C9—H9B 108.9
C5—C4—C3 121.93 (17) H9A—C9—H9B 107.7
C5—C4—Br1 118.89 (13) C11—C10—C9 126.42 (19)
C3—C4—Br1 119.16 (13) C11—C10—H10 116.8
C6—C5—C4 116.90 (16) C9—C10—H10 116.8
C6—C5—H5 121.5 C10—C11—H11A 120.0
C4—C5—H5 121.5 C10—C11—H11B 120.0
C5—C6—C1 121.79 (15) H11A—C11—H11B 120.0
C5—C6—C7 131.16 (15)
C8—N1—C1—C2 179.10 (18) N1—C1—C6—C7 1.88 (19)
C9—N1—C1—C2 2.4 (3) C5—C6—C7—O1 −0.6 (3)
C8—N1—C1—C6 −0.8 (2) C1—C6—C7—O1 176.84 (19)
C9—N1—C1—C6 −177.57 (16) C5—C6—C7—C8 −179.54 (17)
C6—C1—C2—C3 0.6 (3) C1—C6—C7—C8 −2.06 (17)
N1—C1—C2—C3 −179.32 (17) C1—N1—C8—O2 178.62 (17)
C1—C2—C3—C4 0.1 (3) C9—N1—C8—O2 −4.6 (3)
C2—C3—C4—C5 −1.1 (3) C1—N1—C8—C7 −0.51 (19)
C2—C3—C4—Br1 177.05 (14) C9—N1—C8—C7 176.28 (15)
C3—C4—C5—C6 1.4 (3) O1—C7—C8—O2 3.5 (3)
Br1—C4—C5—C6 −176.78 (12) C6—C7—C8—O2 −177.56 (17)
C4—C5—C6—C1 −0.7 (2) O1—C7—C8—N1 −177.40 (17)
C4—C5—C6—C7 176.46 (17) C6—C7—C8—N1 1.59 (18)
C2—C1—C6—C5 −0.3 (3) C8—N1—C9—C10 −90.0 (2)
N1—C1—C6—C5 179.64 (15) C1—N1—C9—C10 86.3 (2)
C2—C1—C6—C7 −178.08 (16) N1—C9—C10—C11 3.6 (3)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C2—H2···O1i 0.93 2.41 3.273 (2) 154
C11—H11A···O2ii 0.93 2.46 3.358 (3) 163

Symmetry codes: (i) x, y−1, z; (ii) x, −y+3/2, z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: XU5413).

References

  1. Abdel-Hamid, M. K., Bremner, J. B., Coates, J., Keller, P. A., Miländer, C., Torkamani, Y. S., Skelton, B. W., White, A. H. & Willis, A. C. (2009). Tetrahedron Lett. 50, 6947–6950.
  2. Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191.
  3. Bruker (2010). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  4. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681105447X/xu5413sup1.cif

e-68-0o240-sup1.cif (14.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681105447X/xu5413Isup2.hkl

e-68-0o240-Isup2.hkl (146.5KB, hkl)

Supplementary material file. DOI: 10.1107/S160053681105447X/xu5413Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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