Abstract
Complicated schemes of classical breeding and their drawbacks, environmental risks imposed by agrochemicals, decrease of arable land, and coincident escalating damages of pests and pathogens have accentuated the necessity for highly efficient measures to improve crop protection. During co-evolution of host-microbe interactions, antimicrobial peptides (AMPs) have exhibited a brilliant history in protecting host organisms against devastation by invading pathogens. Since the 1980s, a plethora of AMPs has been isolated from and characterized in different organisms. Nevertheless the AMPs expressed in plants render them more resistant to diverse pathogens, a more orchestrated approach based on knowledge of their mechanisms of action and cellular targets, structural toxic principle, and possible impact on immune system of corresponding transgenic plants will considerably improve crop protection strategies against harmful plant diseases. This review outlines the current knowledge on different modes of action of AMPs and then argues the waves of AMPs' ectopic expression on transgenic plants' immune system.
Key words: antimicrobial peptides, durable resistance, gene technology, immune system, metchnikowin, sustainable agriculture
Introduction
Cationic as well as anionic antimicrobial peptides (AMPs) are peptides serving as constitutive or inducible defense barriers against microbial infections in plants, insects, amphibians and mammals including human.1–3 They might additionally have the ability to boost the host immunity by functioning as immunomodulators.4,5 Plenty of AMPs exist to cope with practically all potential infection sources. In general, the amphipathic peptides consist of positively charged residues, predominantly arginine and lysine, or else histidine in acidic setting, and a substantial ratio of hydrophobic amino acids.6,7 The best-known antimicrobial peptide families are (1) linear α-helical peptides comprising cecropins8 and magainins9 exhibiting generally antibacterial activities, (2) multiple Cystein-bridge-containing defensins showing antibacterial and antifungal activities,10,11 (3) Pro-rich peptides with activity against bacteria and filamentous fungi,2,12 and (4) the Gly-rich peptides active mainly against Gram-negative and occasionally Gram-positive bacteria.13,14
Major environmental concerns have been leading to prohibition of a huge part of existing agrochemicals all around the world, and coincident growing demands for sustainable strategies in crop protection have inspired the idea of recruiting AMPs for improvement of plant health.15 This review covers the diverse modes of action, by which AMPs impede assaulting pathogens and overviews the impact of expression of AMPs in corresponding transgenic plants in terms of modulating the plant's different immune pathways.
AMPs; General Aspects
Controlled by only one single gene, AMPs can be produced rather quickly upon infection with narrow energy consumption;16 nonetheless, some are constitutively expressed. Despite the fact that AMPs in insects and mammals may modulate the innate and adaptive immune reactions,17 common persuasion on their most important function is elimination of infectious microorganisms.18,19 Several kinds of classification have been proposed for AMPs; however, consistent with their secondary structures AMPs are generally categorized into four clusters:20
linear α-helical peptides containing cationic amphipathic helices that perform inhibitory activities generally against bacteria. Many peptides of this group have been classified as “pore-forming” such as alamethicin, cecropin, PGLa, magainin, melittin and mastoparan.21,23
cyclic peptides with β-sheet structure that form predominantly β-sheets including coupled β-strands due to the presence of two or more disulfide bonds. Although being antifungal in some cases,11,24 they are often characterized as antibacterial peptides. The β-sheets are stably assembled by either disulfide bonds, as in cases of tachyplesins,25 defensins,26 protegrins,27 and gallerimycin,28 or circling of the peptide backbone, as in cases of polymyxin B,29 tyrocidines,30 arenicins.31
peptides with β-hairpin or looped configuration that include those containing a looped structure due to the presence of a single disulfide bond and/or circling of the peptide chain. Thanatin from Podisus maculiventris is an example of this kind of peptides.32 The best-characterized molecules amongst this group are lantibiotics produced by Gram-positive bacteria.
linear peptides with unusual bias in particular amino acids, e.g., drosocin, metchnikowin, apidaecin, abaecin, formaecin, lebocin, pyrrhocoricin and metalnikowin all rich in proline,12,33 indolicidin rich in tryptophan,34 histatin rich in histidine,35 tritrpticin rich in arginine or tryptophan,36 and diptericins and attacins rich in glycine.33 These peptides, predominantly found in Class Insecta, are active against bacteria and fungi.2,37 The most recognized small Pro-rich AMPs are apidaecins that structurally consist of two domains: the conserved domain in charge of general antibacterial activity, and the variable one responsible for the antibacterial spectrum. They are lethal to many Gram-negative bacteria.38 Of interest, several linear AMPs are amorphous in free solution and fold into their final configuration upon partitioning into biological membranes.39
AMPs; Modes of Action
Although mechanisms of action of antimicrobial peptides have been frequently reviewed33, 38, 40–42, there are yet open questions regarding their heterologous functions. Generally speaking, functions of these peptides vary from membrane permeabilization to actions on an array of intracellular target molecules including immuno-modulatory activities (Table 1).
Table 1.
AMPs | Organism | Target molecule | Outcome |
Native AMPs | Bacteria | Membrane phospholipids/LPS | Prevention of vital microbial homeostasis because of pore formation in membranes64 |
DnaK; receptor/docking/transporter molecule; GroEL | Inhibition of natural ATPase activity; Inhibition of chaperon-assisted protein folding68–70 | ||
Ribosome | Protein synthesis inhibition69 | ||
Fungi | Membrane glycosyl ceramide | Membrane permeabilization779,80 | |
Redox signaling cascade | Induction of ROS, membrane damage, organelle breakdown and cell death24,82 | ||
MAP kinase signaling cascades | Regulation of fungal genes important for overcoming plant defense83 | ||
Chitin in cell wall | Interference with chitin synthesis85,86 | ||
Plants | Diverse molecules | Modification of host gene expression88,89 | |
Induction of cell death in other plants90 | |||
Association with epigenetic somaclonal variation events91 | |||
Conferring zinc tolerance92 | |||
Mammals | Nucleus | Cell cycle impairment in rat retinal neuroblasts81 | |
L-type Ca2+ channel | Blockade of mammalian L-type Ca2+ channel84 | ||
Diverse molecules | Playing as chemokines93,94 and/or induction of chemokine production95 | ||
Inhibition of pro-inflammatory cytokine production induced by LPS96 | |||
Wound healing promotion97 | |||
Inhibitory activities toward tumor cells and HIV-1 reverse transcriptase98 | |||
Modulation of adaptive immune responses4,5 | |||
Transgenic AMPs in plants | Microbes | Diverse molecules | Interference with microbial fitness and virulence establishment2,99 |
Plants | Diverse molecules | Primed status of transgenic plants due to more activated ISR and SAR and higher redox potential2,99,100 | |
Alteration of processes of synthesis, folding, and stabilization of proteins which enter to the secretory pathway101 | |||
Alteration of translational machinery101 | |||
Alteration of components of vesicle-associated transport machinery101 | |||
Improved protection against oxidative stress24,82,99–101 |
Pore-forming activity.
Ability to interact with membranes is a classical countenance of AMPs;43 nonetheless, membrane permeabilization is not an absolute feature. Earlier reports indicate an utter correlation between antibiotic effects of defensins and membrane permeabilization.44,45 Notable hydrophilic positively charged domains facilitate the peptides to interact with the negatively charged microbial surfaces and head groups of bilayer phospholipids leading to cell membrane penetration. Three pore-forming mechanisms are described to explain the effects of α-helical membrane peptides.1,40 A simplistic schematic illustration of different pore formation mechanisms is provided in Figure 1 and a selection of peptides showing different pore-forming mechanisms is given in Table 2. The so-called “carpet-like” mechanism refers to destruction of membrane assembly by collaborative action of peptides.40 Peptides self-associate onto the acidic phospholipid-rich regions of lipid bilayers and once their concentrations reach a certain threshold they permeate into the membrane by mounting the bilayer positive potential.38 The second pore-formation mechanism “barrel-stave”63 is symbolized in alamethicin;60 it inserts into the membrane hydrophobic area and creates a pore by forming trans-membrane helical bundles. In the third mechanism, the “toroidal” model, the peptide builds toroidal pores in lipid bilayers. Pore construction is, intriguingly, managed by the lipid polar head groups and the helix bundles that orient vertically to the membrane exterior. More precisely, the attached peptides aggregate and induce the lipid monolayers to bend continuously through the pore so that both the inserted peptides and the lipid head groups line the water core.1 Pores act as non-selective channels for ions, toxins and metabolites, thus preventing the microbe from maintaining the vital homeostasis.64 Conditional on experimental settings, α-helical membrane peptides can take on different pore-forming mechanisms. For instance, the pore-forming mechanism differs appropriate to the type of membranes and pH, which indicates the essence of experimental settings in the studies on AMPs' modes of action.65 On the other hand, making the Magainin2 tetravalent and octavalent largely increases the pore-forming capability of peptide leading to decreasing the peptide minimal inhibitory concentration to low nanomolar ranges.66
Table 2.
Pore-forming mechanism | Peptide | Origin | Reference |
Carpet-like (detergent-like) | Cecropins | Hyalophora cecropia | 47 |
PGLa | Xenopus laevis | 48 | |
Dermaseptins | Phyllomedusa spp. | 49 | |
Ovispirin | Ovis aries | 50 | |
Latarcins | Lachesana tarabaevi | 51 | |
RL-37 | Macaca mulatta | 52 | |
Toroidal (wormhole) | Mastoparan X | Vespa xanthoptera | 53 |
Magainin 2 | Xenopus laevis | 54, 55 | |
LL-37 | Homo sapiens | 52, 56 | |
Melittin | Xenopus laevis | 57 | |
Piscidin | Morone saxatilis | 58 | |
Barrel-Stave | Pardaxin | Pardarchirus marmoratus | 59 |
Alamethicin | Trichoderma viride | 60 | |
Amphotricin B | Streptomyces nodosus | 61 | |
Ceratotoxin | Ceratitis capitata | 62 |
Inhibition of DNA and protein functions.
It is postulated that the positive charge in the short Pro-rich AMPs boosts bacterial cell access67 and the existing prolines may perhaps inhibit helix formation and hence, toxicity to the host. Nevertheless, apidaecins belonging to short Pro-rich peptides are of distinction by lacking the pore-inducing action.38 Eradication of bacteria by apidaecins commences by an ambiguous interaction of the peptide with an outer membrane component like LPS and DnaK,68 and consequently, its entrance into the periplasmic space. Next, peptide traverses inner membrane specifically by an irrevocable band with either a receptor/docking/transporter molecule69 or the 60-kDa bacterial chaperone GroEL.68 Ultimately, the peptide is displaced into the cell where it runs into its certain target that is either ribosome leading to protein synthesis inhibition69 or DnaK leading to protein folding inhibition.68,70 Evidently, pyrrhocoricin, a relative of apidaecins, inhibits natural ATPase activity and chaperon-assisted protein folding of E. coli's DnaK, whereas it lacks any activity on human HSP70.68,70 In contrast, PR-39 kills bacteria by stopping their DNA and protein syntheses and gives rise to degradation of these components.71 Interestingly, PR-39 does pass through membranes without any apparent damage. The molecule can induce the synthesis of syndecans involved in wound healing72 and hamper the NADPH-dependent redox reactions.73
Prokaryotic DnaK recognizes extended peptide constituents as well as positively charged residues inside and outside of its substrate-binding furrow.74 This might also occur to similar sequence motifs in typical members of Pro-rich peptides family, i.e., pyrrhocoricin, drosocin, apidaecin and metchnikowin. It is evident that metchnikowin can be triggered by both major pathways of fruit fly immune system, imd and Toll,75,76 which makes it unique in terms of extreme immune capacity to almost all potential microbes, e.g., fungi, bacteria and even viruses. As well, obstruction of chaperone-assisted protein folding by Prorich cationic peptides70 prospects a gallant approach to combating microbial infections.
Disturbance of other intracellular targets.
It is documented that plant defensins, contrary to their mammalian and insect orthologs, neither induce ion permeable pores in artificial phospholipidic membranes nor change their electrical status, making evident that these defensins do not interact directly with plasma membrane phospholipids.77,78 Though it was reported that the antifungal defensin NaD1 from Nicotiana alata induces membrane permeabilization, its activity may not only be restricted to the hyphal membrane, but it also enters cells and affects intracellular targets.24
Defensins of different origins exhibit no clear similarities in their modes of mechanism; nevertheless, fungal membrane sphingolipid glycosyl ceramide is the most common key target of a number of defensin-called peptides. Glycosyl ceramide was identified as specific target for the antifungal plant defensin RsAFP2 and the insect defensin-like peptide heliomicin.79 Consistently, a Fusarium graminearum mutant deficient in glycosyl ceramide was resistant to both radish RsAFP2 and alfalfa MsDef1 defensins, corroborating the idea that glycosyl ceramide is also the target of MsDef1.80 On the contrary, pea defensin, Psd1, directs cell cycle impairment and causes Neurospora crassa conidia to undergo endoreduplication. Furthermore, Psd1 regulates interkinetic nuclear migration from Synthesis (S) to Mitosis (M) phase of cell cycle in rat retinal neuroblasts.81 Additionally, some defensins such as RsAFP282 and NaD124 modulate the intracellular signaling cascades, specifically, induction of reactive oxygen species (ROS) that upon accumulation may cause membrane damage, organelle breakdown and eventually cell death. Pertinent support for this modulatory activity was found in certain mutants of F. graminearum disrupted in some MAPKKK(s) genes that were hypersensitive to alfalfa MsDef1, barrel clover MtDef2, and radish RsAFP2. MAP kinase signaling cascades in F. graminearum regulate the fungus sensitivity to plant defensins.83 It is giving proof that plant defensins can act as stimuli to launch MAP kinase signaling cascades involved in regulating the fungal genes important for overcoming the plant defense. It would seem, upon binding of defensins to their receptors, activation of MAPKKK(s) occurs owing to physical interaction and/or phosphorylation by either the receptor itself or intermediary factors or an interlinking kinase.83 Moreover, MsDef1 has been characterized to block the mammalian L-type Ca2+ channel in a manner akin to structurally unrelated antifungal toxin KP4 from Ustilago maydis.84 It is, as well, documented that bamboo defensins-like AMPs, PpAMP1 and PpAMP2, bind to chitin in microbial cell walls,85 and Aspergillus giganteus defensin, AFP, inhibits the chitin biosynthesis in susceptible fungi.86 Consistently, chitin synthase mutants of Fusarium oxysporum and Aspergillus oryzae are less susceptible to AFP. Presumably, AFP causes cell wall stress by interfering with the chitin synthesis and disturbing the cell integrity in sensitive fungi.86
Several lines of evidence from different studies indicate that microbial membrane permeabilization or/and cell wall disruption are within modes of mechanism of defensins.87 However, the issue whether the lytic action (membrane disturbance) is a phenomenon actively processed by AMPs to kill the microbes remains an enigma.
Besides direct elimination of microbes, AMPs have been shown to possess several immuno-modulatory functions such as modification of host gene expression,88,89 induction of cell death in other plants,90 association with epigenetic somaclonal variation events,91 conferring zinc tolerance,92 playing as chemokines,93,94 and/or induction of chemokine production,95 inhibition of proinflammatory cytokine production induced by LPS,96 wound healing promotion,97 inhibitory activities toward tumor cells and HIV-1 reverse transcriptase,98 and modulation of adaptive immune responses, e.g., by activation of human plasmacytoid dendritic cells in some auto-immune diseases.4,5
Modulation of different cascades of immune system in relevant transgenic plants.
There are some reports demonstrating that the host gene profiling alters after introgression of antimicrobial peptides.2,99,100,101 Expression of metchnikowin gene from Drosophila melanogaster in barley to codify a peptide with antimicrobial activity was recruited to improve plant defense against microbial attacks.2 Assessment of metchnikowin effects on powdery mildew fungus during its interaction with transgenic barley provided evidence that the antifungal peptide improves the resistance of plant as if it impedes the development of functional haustorium due to increased rate of hypersensitive response (HR) and development of cell wall apposition (CWA).2 Comprehensive study on possible latent influence of metchnikowin on the defense system of plant revealed that the SAR and ISR pathways as well as redox status of metchnikowin-expressing barley plants are potentiated during interaction with powdery mildew fungus.99 In Phenylpropanoid pathway, the PAL-1 gene expression profile demonstrated that in Bgh challenge the activity of phenylalanine ammonia-lyase is elevated in metchnikowin transgenic plants.99 Similar observation was reported by Distefano et al. (2008) for PAL gene,100 which suggests that highly activated ISR may be one of the causes of higher resistance in these transgenic plants. This suggestion is supported by elevated expression of PR-6 in metchnikowin plants compared with that in wild type individuals.99 The higher level of reactive oxygen species down to expression of antimicrobial peptides24,82,99,100 supports the notion that these peptides play some part of their roles by modulating the redox milieu, which might ultimately lead to cell death.
Examination of susceptibility factors, i.e., MLO and Bax inhibitor-1 in metchnikowin barley concluded that the susceptibility/resistance of those plants is independent of these factors.99 Comparative analysis of gene expression between cecropin A transgenic and wild-type rice plants grown under optimal conditions and during infection of rice with the rice blast fungus Magnaporthe oryzae revealed the overexpression of diverse genes involved in (1) protection against oxidative stress, (2) processes of synthesis, folding and stabilization of proteins that enter into the secretory pathway, (3) translational machinery, and (4) genes encoding components of the vesicle-associated transport machinery in cecropin A rice.101 Together, these reports imply the altered immune status of AMPs-expressing plants.
Using AMPs for Plant Disease Control
As demands for a better control of plant diseases increase, AMPs come into focus.15 To date, a multitude of gene constructions with coding sequences of AMPs have been expressed in planta leading to various extents of protection against fungal and bacterial pathogens (see ref. 99). Insect peptides seem especially suitable owing to their exceptionally broad antimicrobial potential for protecting their hosts against various biotic challenges. Growing knowledge on structure-function relationships and thus elucidation of essential peptide domains will press forward the use of synthetic AMPs in transgenic crop plants. Synthetic analogues of cecropins facilitated their ectopic expression for improvement of plant fitness in biotic stress circumstances.102 Interestingly, early attempts to express cecropin in tobacco for resistance induction against Pseudomonas syringae pv. tabaci were barely successful.103 Short persistence of cecropin B has been ascribed to proteinases in the cytosol mediating proteolysis through an initial endopeptidase cleavage.104 To put off such an interfering process, cecropin B-derived peptides were manipulated to be shorter in length. Alternatively, targeting the mature peptides using signal sequences from different origins into the intercellular spaces, in which proteinases are seldom present, could lead to relatively higher accomplishment.105 Accordingly, the antimicrobial activity of intercellular fluid of metchnikowin expressing barley plants2 and the green fluorescing background of intercellular spaces surrounding the faintly fluorescing barley epidermal cells that transiently express the GFP-fused metchnikowin peptide99 confirm the functionality of the fruit fly-origin signal sequence of metchnikowin peptide, in planta, to secrete the produced peptide into the intercellular space. As another strategy, molecular modeling for engineering the AMPs offers a dominant tool to engender peer synthetic and chimeric peptides with potentially superior properties.
Prospective for Future Endeavors
Dose-effect and synergistic activity.
Though it has been reported that the degree of antimicrobial activity is not dependent on the AMP production level in transgenic plants,106 most of the publications furnish clear evidence for peptides' dose-effect activity.82,100,107,108 Some investigators emphasize the possibility of synergism among different AMPs.109–111 In vivo data for different antibacterial peptides show that defensins and linear peptides work in-synergy,112,113 as exemplified by synergism between LL-37 and human β-defensin HBD-2.114 Consistently, concomitant expression of AMPs in plants usually leads to higher levels of induced resistance than their individual expression.115,116 This finding is reminiscing of the effect known from combining disease resistance genes (gene pyramiding) in traditional breeding, which often results in long-lasting, durable plant protection against pathogens.
Recruiting inducible promoters.
General propensity toward reducing fitness costs117 as well as downgrading the co-evolutionary collapse of resistance to microbes has weighted the generation of plants expressing AMPs on-demand, by exploiting synthetic or native inducible promoters activated upon pathogen attack.2,11,107,118,119 Employment of wounding and/or pathogen-inducible promoters ensures high expression level of the peptide upon mechanical wounding and/or microbial infections. This may assist to avoid the development of pathogenic microbes capable of circumventing induced disease resistance, by e.g., mutation and/or synthesis of proteolytic agents.
Approaching different strategies to alleviate existing drawbacks.
Undesirably, application of AMPs to engineer pathogen resistance in plants suffers from some limitations, namely species- and race-specificity of the peptides,120 slight enhanced resistance,106 induction of infertility,121 and leakage of conferred resistance after a while due to resiliency of disease-causing microbes.38 To alleviate these drawbacks as well as to increase the antimicrobial potency of existing peptides, several approaches have been proposed to follow. Engineering crop plants for disease resistance via chloroplast genome instead of nuclear genome is proposed to achieve high levels of expression and to prevent pollen-mediated escape of transgenes.122 In addition, synthesis/manipulation of peptides for base(s) substitution/deletion and AMPs' chimeric hybridization result in improved disease resistance in plants.120,123,124 Expression of antibody-AMP fusion proteins has been shown to control microbial pathogens, more efficiently and durably.125,126 Also, targeting the AMPs into endoplasmic reticulum instead of intercellular spaces dramatically drops the probability of infertility.121 Moreover, expression of a cocktail of AMPs with different modes of action demotes the possibility of resistance depletion attributable to microbial escape. Notably, insects synthesize concurrently a continuum of low-molecular-mass inhibitors against microbial proteases in company with AMPs.127 It is anticipated that these inhibitors annihilate the digestive action of proteolytic enzymes secreted from plant pathogenic fungi.128 Consequently, coincident transmission/expression of insect AMPs and inhibitors of microbial proteases will possibly avert the selection of pathogens, which can negate the foreign peptides in transgenic plants.
Biosafety remarks.
From the ecological point of view, the issue whether or not transfer of AMPs into plants imperils the mutualistic interactions between plants and beneficial microbes should be addressed. There are reports stating target specificity for AMPs among the kingdom of fungi. The phyla Glomeromycota and Basidiomycota that accommodate many symbiotic fungi might be less sensitive to AMPs than Ascomycota.2,129–131 However some AMPs affect Basidiomycota rather well, this might not be taken as a rule.108,115,119,124,132 Regarding specificity, the activity of metchnikowin on orchid mycorrhiza Piriformospora indica133 has been studied in detail.2 Growth and development of this fungus was not demolished in transgenic plants producing the metchnikowin, whilst ascomycete fungi were impaired.2 Despite the fact that the definite cause for specificity has not been elucidated yet, these observations do prospect a promising approach: utilizing AMPs to diminish the devastating consequences of diseases and pests without affecting the plant's essential mutualistic interactions with beneficial symbionts. Clearly, these symbionts are of vital importance for plants in terms of presenting a better fitness via supporting water and mineral uptake as well as strengthening disease resistance.134 However, it must be stressed that more research is needed to identify differential targets of AMPs in fungi in order to explain AMP's specificity on the molecular level.
AMPs potential for combating viruses and pests.
Since antiviral activities are within the panel of AMP's properties,135–137 it will be interesting to assess the potential of AMPs for controlling countless viral diseases in plants. However, since it is known that Toll pathway, one of the major pathways in immune response in Drosophila, is required for efficient inhibition of virus replication in infected flies,138 expectation to restrain viruses in plants should be considered, critically. Finally, in order to manage the pest damages on plants, one might think of expressing AMPs under the control of plant tissue specific promoters, for instance, those for in-phloem expression to construct some lethal peptides to devastating pests, though the biosafety aspects must be, yet again, well thought-out.
Overall, the provided data on endogenous genes expression in AMPs transgenic plants suggest that antimicrobial genes play their roles in disease resistance in part via modulation of different resistance mechanisms. They might also join forces of various plant immune pathways culminating in a primed status. The provided evidence on the involved pathway(s) in AMPs-induced resistance will improve our knowledge concerning the impacts of antimicrobial peptides, expressed in diverse plant species, on the immune system of transgenic plants. This helps going beyond the current notion that antimicrobial peptides-derived resistance refers solely to the direct noxious effects of these peptides on pathogenic microbes. Certainly, entire clarity of this important issue demands elaborate and comprehensive experiments, namely the use of transcriptomics to explore the impact of transgene expression in plants.
Acknowledgments
The research in my lab is financially supported by grants from Shahid Bahonar University of Kerman (Iran).
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