Abstract
A ribonucleoprotein complex whose RNA complement consists exclusively of small nuclear RNA species (snRNA) has been purified from particles containing heterogenous nuclear RNA (hnRNP) from HeLa cells. This was accomplished by taking advantage of their ability to band at a density of about 1.43 g/cm3 in plain cesium chloride as well as in cesium chloride gradients containing 0.5% sarkosyl without prior aldehyde fixation. After these two steps of equilibrium density centrifugation, these snRNPs were still largely contaminated by free proteins (and especially phosphoproteins). A final step of purification by velocity sedimentation in a sucrose gradient containing 0.5 M cesium chloride and 0.5% sarkosyl was efficient in completely eliminating all free proteins. U1, U2, U4, U5 and U6 species according to the nomenclature of Lerner et al. (Nature, (1980) 283, 220-224) were found in these purified snRNPs, while a significant part of U6 and a small amount of U2 were found in the bottom fraction. 5S species behaved entirely as free RNA and is presumably a contaminant of cytoplasmic origin. Electrophoresis of proteins from snRNP labeled in vivo with (35S) methionine, revealed four bands with migrations corresponding to molecular weights ranging between 10,000 and 14,000 daltons.
Full text
PDF















Images in this article
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Blanchard J. M., Brunel C., Jeanteur P. Characterisation of an endogenous protein kinase activity in ribonucleoprotein structures containing heterogenous nuclear RNA in HeLa cell nuclei. Eur J Biochem. 1977 Sep 15;79(1):117–131. doi: 10.1111/j.1432-1033.1977.tb11790.x. [DOI] [PubMed] [Google Scholar]
- Branlant C., Krol A., Ebel J. P., Lazar E., Gallinaro H., Jacob M., Sri-Widada J., Jeanteur P. Nucleotide sequences of nuclear U1A RNAs from chicken, rat and man. Nucleic Acids Res. 1980 Sep 25;8(18):4143–4154. doi: 10.1093/nar/8.18.4143. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Branlant C., Krol A., Machatt M. A., Ebel J. P. Structural study of ribosomal 23 S RNA from Escherichia coli. FEBS Lett. 1979 Nov 1;107(1):177–181. doi: 10.1016/0014-5793(79)80490-1. [DOI] [PubMed] [Google Scholar]
- Deimel B., Louis C. H., Sekeris C. E. The presence of small molecular weight RNAs in nuclear ribonucleoprotein particles carrying HnRNA. FEBS Lett. 1977 Jan 15;73(1):80–84. [PubMed] [Google Scholar]
- Ducamp C., Jeanteur P. Characterization of nuclear RNP particles from Hela cells. Analysis of protein and RNA constituents. Presence of poly (A). Biochimie. 1973;55(10):1235–1243. doi: 10.1016/s0300-9084(74)80328-7. [DOI] [PubMed] [Google Scholar]
- Epstein P., Reddy R., Henning D., Busch H. The nucleotide sequence of nuclear U6 (4.7 S) RNA. J Biol Chem. 1980 Sep 25;255(18):8901–8906. [PubMed] [Google Scholar]
- Flytzanis C., Alonso A., Louis C., Krieg L., Sekeris C. E. Association of small nuclear RNA with HnRNA isolated from nuclear RNP complexes carrying HnRNA. FEBS Lett. 1978 Dec 1;96(1):201–206. doi: 10.1016/0014-5793(78)81094-1. [DOI] [PubMed] [Google Scholar]
- Guimont-Ducamp C., Sri-Widada J., Jeanteur P. Occurrence of small molecular weight RNAs in Hela nuclear ribonucleoprotein particles containing HnRNA. Biochimie. 1977;59(8-9):755–758. doi: 10.1016/s0300-9084(77)80259-9. [DOI] [PubMed] [Google Scholar]
- Howard E. F. Small nuclear RNA molecules in nuclear ribonucleoprotein complexes from mouse erythroleukemia cells. Biochemistry. 1978 Aug 8;17(16):3228–3236. doi: 10.1021/bi00609a009. [DOI] [PubMed] [Google Scholar]
- Jay E., Bambara R., Padmanabhan R., Wu R. DNA sequence analysis: a general, simple and rapid method for sequencing large oligodeoxyribonucleotide fragments by mapping. Nucleic Acids Res. 1974 Mar;1(3):331–353. doi: 10.1093/nar/1.3.331. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kish V. M., Pederson T. Ribonucleoprotein organization of polyadenylate sequences in HeLa cell heterogeneous nuclear RNA. J Mol Biol. 1975 Jun 25;95(2):227–238. doi: 10.1016/0022-2836(75)90392-7. [DOI] [PubMed] [Google Scholar]
- Kole R., Altman S. Reconstitution of RNase P activity from inactive RNA and protein. Proc Natl Acad Sci U S A. 1979 Aug;76(8):3795–3799. doi: 10.1073/pnas.76.8.3795. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Larsen C. J., Galibert F., Lelong J. C., Boiron M. Caractérisation dans la fraction nucléaire de cellules KB d'un ARN métaboliquement stable de faible poids moléculaire. C R Acad Sci Hebd Seances Acad Sci D. 1967 Mar 13;264(11):1523–1526. [PubMed] [Google Scholar]
- Lelay M. N., Brunel C., Jeanteur P. Peptide mapping of in vivo and in vitro phosphorylated sites of proteins from HeLa hnRNP. FEBS Lett. 1978 Jun 1;90(1):54–56. doi: 10.1016/0014-5793(78)80296-8. [DOI] [PubMed] [Google Scholar]
- Lerner M. R., Boyle J. A., Mount S. M., Wolin S. L., Steitz J. A. Are snRNPs involved in splicing? Nature. 1980 Jan 10;283(5743):220–224. doi: 10.1038/283220a0. [DOI] [PubMed] [Google Scholar]
- Lerner M. R., Steitz J. A. Antibodies to small nuclear RNAs complexed with proteins are produced by patients with systemic lupus erythematosus. Proc Natl Acad Sci U S A. 1979 Nov;76(11):5495–5499. doi: 10.1073/pnas.76.11.5495. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Liautard J. P., Jeanteur P. Purification of histone messenger ribonucleoprotein particles from HeLa cell S-phase polysomes. Characterization of associated proteins. Nucleic Acids Res. 1979 Sep 11;7(1):135–150. doi: 10.1093/nar/7.1.135. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Northemann W., Scheurlen M., Gross V., Heinrich P. C. Circular dichroism of ribonucleoprotein complexes from rat liver nuclei. Biochem Biophys Res Commun. 1977 Jun 20;76(4):1130–1137. doi: 10.1016/0006-291x(77)90973-1. [DOI] [PubMed] [Google Scholar]
- Peacock A. C., Dingman C. W. Resolution of multiple ribonucleic acid species by polyacrylamide gel electrophoresis. Biochemistry. 1967 Jun;6(6):1818–1827. doi: 10.1021/bi00858a033. [DOI] [PubMed] [Google Scholar]
- Raj N. B., Ro-Choi T. S., Busch H. Nuclear ribonucleoprotein complexes containing U1 and U2 RNA. Biochemistry. 1975 Oct 7;14(20):4380–4385. doi: 10.1021/bi00691a006. [DOI] [PubMed] [Google Scholar]
- Reddy R., Ro-Choi T. S., Henning D., Busch H. Primary sequence of U-1 nuclear ribonucleic acid of Novikoff hepatoma ascites cells. J Biol Chem. 1974 Oct 25;249(20):6486–6494. [PubMed] [Google Scholar]
- Rein A. The small molecular weight monodisperse nuclear RNA's in mitotic cells. Biochim Biophys Acta. 1971 Mar 11;232(2):306–313. doi: 10.1016/0005-2787(71)90583-1. [DOI] [PubMed] [Google Scholar]
- Rogers J., Wall R. A mechanism for RNA splicing. Proc Natl Acad Sci U S A. 1980 Apr;77(4):1877–1879. doi: 10.1073/pnas.77.4.1877. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Sekeris C. E., Niessing J. Evidence for the existence of a structural RNA component in the nuclear ribonucleoprotein particles containing heterogeneous RNA. Biochem Biophys Res Commun. 1975 Feb 3;62(3):642–650. doi: 10.1016/0006-291x(75)90447-7. [DOI] [PubMed] [Google Scholar]
- Simoncsits A., Brownlee G. G., Brown R. S., Rubin J. R., Guilley H. New rapid gel sequencing method for RNA. Nature. 1977 Oct 27;269(5631):833–836. doi: 10.1038/269833a0. [DOI] [PubMed] [Google Scholar]
- Spirin A. S. The second Sir Hans Krebs Lecture. Informosomes. Eur J Biochem. 1969 Aug;10(1):20–35. doi: 10.1111/j.1432-1033.1969.tb00651.x. [DOI] [PubMed] [Google Scholar]
- Stark B. C., Kole R., Bowman E. J., Altman S. Ribonuclease P: an enzyme with an essential RNA component. Proc Natl Acad Sci U S A. 1978 Aug;75(8):3717–3721. doi: 10.1073/pnas.75.8.3717. [DOI] [PMC free article] [PubMed] [Google Scholar]
- de Wachter R., Fiers W. Preparative two-dimensional polyacrylamide gel electrophoresis of 32 P-labeled RNA. Anal Biochem. 1972 Sep;49(1):184–197. doi: 10.1016/0003-2697(72)90257-6. [DOI] [PubMed] [Google Scholar]