An association between polymorphism of the heme oxygenase-1 and -2 genes and age-related macular degeneration

Abstract

Iron may be implicated in the generation of oxidative stress by the catalyzing the Haber–Weiss or Fenton reaction. On the other hand, oxidative stress has been implicated in the pathogenesis of age-related macular degeneration (AMD) and heme oxygenase-1 (HO-1), encoded by the HMOX1 gene and heme oxygenase-2 (HO-2), encoded by the HMOX2 gene are important markers of iron-related oxidative stress and its consequences. Therefore, variability of the HMOX1 and HMOX2 genes might be implicated in the pathogenesis of AMD through the modulation of the cellular reaction to oxidative stress. In the present work, we investigated the association between AMD and a G → C transversion at the 19 position in the HMOX1 gene (the 19G>C-HMOX1 polymorphism, rs2071747) and a A → G transition at the −42 + 1444 position in the HMOX2 gene (the −42 + 1444A>G-HMOX2 polymorphism, rs2270363) and its modulation by some environmental factors. 279 patients with AMD and 105 controls were recruited in this study and the polymorphisms were typed by restriction fragment length polymorphism and allele-specific polymerase chain reaction (PCR). We observed an association between the occurrence of dry AMD and the G/A genotype of the −42 + 1444A>G-HMOX2 polymorphism (odds ratio (OR) 2.72), whereas the G/G genotype reduced the risk of dry AMD (OR 0.41). The G/C genotype and the C allele of the 19 G>C-HMOX1 polymorphism and the G/G genotype and the G allele of the −42 + 1444A>G-HMOX2 polymorphism were associated with progression of AMD from dry to wet form (OR 4.83, 5.20, 2.55, 1.69, respectively). On the other hand, the G/G genotype and the G allele of the 19 G>C-HMOX1 polymorphism and the A/G genotype and the A allele of the −42 + 1444A>G-HMOX2 polymorphism protected against AMD progression (OR 0.19, 0.19, 0.34, 0.59, respectively). Therefore, the 19G>C-HMOX1 and the −42 + 1444A>G-HMOX2 polymorphisms may be associated with the occurrence and progression of AMD.

Electronic supplementary material

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Introduction

Age-related macular degeneration (AMD) is an eye disease that results in a progressive and irreversible loss of central vision and is considered as the primary cause of visual impairment, including blindness in the elderly, in industrialized countries [1, 2]. This disease affects the retinal pigment epithelium (RPE), Bruch’s membrane (BM) and choriocapillaries [3, 4]. The etiology of AMD is not fully understood and it is likely underlined by a complex interaction between genetic and environmental factors [5]. The latter are age, smoking, sex, Caucasian ethnicity, chronic sunlight exposure, overweight and obesity and cardiovascular diseases [6–9]. A number of epidemiological studies has indicated AMD as an inherited disease, showing that family members are at an increased risk [10–15].

Several studies on the molecular character of AMD suggest an important role of oxidative stress in its pathology. The retina in general, and macula in particular are highly susceptible to oxidative stress because of elevated oxygen pressure, high metabolic activity, prolonged exposure to UV and blue light, presence of photosensitizers and oxidative phagocytosis of photoreceptors. Also iron overload in the retina may contribute to its oxidative damage by the catalyzing Haber–Weiss and Fenton reactions, producing reactive oxygen species (ROS) [16, 17]. AMD may be exacerbated by retinal iron overload and eyes with macular degeneration showed elevated levels of iron in the RPE, BM and within drusen [18]. Moreover, the concentration of retinal iron increases with age [19].

Several enzymes are important in the formation and reduction of iron-generated ROS. Heme oxygenase-1 (HO-1), encoded by the HMOX1 gene and the closely related heme oxygenase-2 (HO-2), encoded by the HMOX2 gene, convert heme, a powerful pro-oxidant, to biliverdin, which is then changed to bilirubin, a strong antioxidant, by the enzyme biliverdin reductase. Because of this activity, HOs may have an important role in oxidative stress-related diseases, including AMD. HO-1 and HO-2 levels were found to decrease with age in RPE cells from eyes with evidence of neovascular AMD [20].

As HO-1 and HO-2 may be involved in AMD, the variation in the sequence of their genes may also contribute to this disease. Many studies confirmed the association between genetic variability and AMD [21–26]. In the present work we investigated the association between a G → C transversion at the 19 position in the HMOX1 gene (the 19G>C-HMOX1 polymorphism, rs2071747) and an A → G transition at the −42 + 1444 position in the HMOX2 gene (the −42 + 1444A>G-HMOX2 polymorphism, rs2270363) and AMD. We also investigated the modulation of such possible association by some clinical and life-style factors. The 19 G>C-HMOX1 polymorphism is located in the coding region (exon 1) of the HMOX1 gene, while the other polymorphism is in the 5′ flanking region of the HMOX2 gene. We chose polymorphisms with a minor allele frequency ≥3% in an European population. The 19G>C-HMOX1 polymorphism is a non-synonymous mutation resulting in an Asp to His substitution in the 7 codon. Non-synonymous coding polymorphisms along with the polymorphism in the regulatory region of a gene are believed to comprise a group of single nucleotide polymorphisms (SNPs) that may the highest potential phenotypic influence [27].

Materials and methods

Study subjects and data collection

Blood samples were obtained from 279 patients with AMD and from 105 individuals without visual disturbances. Among AMD patients, 101 had dry AMD and the remaining 178—wet form of this disease. The characteristics of patients and controls enrolled in this study are presented in Supplementary Table 1. All patients and controls were examined in the Department of Ophthalmology, Medical University of Warsaw (Warsaw, Poland). They underwent ophthalmic examination, including best-corrected visual acuity, intraocular pressure, slit lamp examination, and fundus examination, performed with a slit lamp equipped with either non-contact or contact fundus lenses. Diagnosis of AMD was confirmed by optical coherence tomography (OCT) and, in some cases, by fluorescein angiography (FA) and indocyanin green angiography (ICG). OCT evaluated retinal thickness, the presence of RPE atrophy, drusen, or subretinal fluid and intraretinal edema; angiography assessed the anatomical status of the retinal vessels, the presence of choroidal neovascularization and leakage. The OCT examinations were performed with Stratus OCT model 3000, software version 4.0 (Oberkochen, Germany). The FA and ICG examinations were performed with a Topcon TRC-50I IX fundus camera equipped with the digital Image Net image system, version 2.14 (Topcon, Tokyo, Japan). The study design was approved by the Bioethics Committee of the Medical University of Warsaw and each subject gave a written informed consent. Each subject was interviewed to provide data on tobacco smoking (never/ever), alcohol use (never/ever) and other risk factors: sex, negative and positive family history for AMD, age, living environment (rural or urban areas). Each subject donated a 5 ml volume venous blood sample, 250 μl of which was used for the extraction of genomic DNA. All samples were coded after collection of blood and completing the questionnaire.

Selection of SNPs for HMOX1 and HMOX2 and primer design

A list of SNPs in the HMOX1 and HMOX2 genes was obtained from the public domain of the National Center for Biotechnology Information at http://www.ncbi.nlm.nih.gov/snp. We chose SNPs with a minor allele frequency not lesser than 3% in the European population. Primers were designed using the HMOX1 and HMOX2 genomic sequence found at http://www.ensembl.org/Homo_sapiens/Gene/Sequence?g=ENSG00000100292;r=22:35776354-35790207 and http://www.ensembl.org/Homo_sapiens/Gene/Sequence?g=ENSG00000103415;r=16:4524719-4560348) and Primer3Plus software (http://www.bioinformatics.nl/cgi-bin/primer3plus/primer3plus.cgi).

DNA extraction and storage

Genomic DNA was prepared by using the commercial AxyPrep™ Blood Genomic DNA Miniprep Kit (Axygen Biosciences, Union City, CA, USA), according to the manufacturer’s instructions. DNA purity and concentrations were determined spectrophotometrically at 260 and 280 nm. The purified genomic DNA was stored in TE buffer (5 mM Tris–HCl, 0.1 mM EDTA, pH 8.5), at −20°C until use.

Genotyping

The genotypes of the 19 G>C-HMOX1 polymorphism were determined by the allele-specific oligonucleotide-PCR method. PCR assay was performed in a total volume of 25 μl containing 50 ng of genomic DNA, 1 U Biotools DNA polymerase (Biotools, Madrid, Spain), 1× reaction buffer (750 mM Tris–HCl, pH 9.0, 500 mM KCl, 200 mM (NH₄)₂SO₄), 0.2 mM of each dNTP, 1.5 mM MgCl₂, 0.25 μM of each primers (Metabion, Martinsried, Germany). Thermal cycling conditions were as follows: initial denaturation step at 95°C for 5 min, 35 cycles at 95°C for 30 s, 60 s at 63°C annealing temperature and 60 s at 72°C. The final extension step was performed for 7 min at 72°C. The following primers were used: allele-specific sense oligonucleotides: 5′-GGATGGAGCGTCCGCAACCCC-3′ for C variant and 5′-GGATGGAGCGTCCGCAACCCG-3′ for G variant and antisense oligonucleotide: 5′-CGCATACCAGGGTGCCAGGCAT-3′. The PCR products (241 bp) were run onto a 3% agarose gel, stained with ethidium bromide and viewed under UV light. Supplementary Fig. 1 presents a representative gel for analysis of this polymorphism.

The polymerase chain reaction-restriction fragment length polymorphism (PCR–RFLP) method was used to determine the genotypes of the −42 + 1444A>G-HMOX2 polymorphism. PCR assay was performed in a total reaction volume of 25 μl containing the same chemicals as in the previous analysis except for primers. 385-bp length fragments containing polymorphic site were amplified using the following primers: sense 5′-GGTGGTGCCACGGTTGACAA-3′ and antisense 5′-GTCCGCCAGCCTCCAGTCAG-3′. The PCR profile contained an initial denaturation step for 5 min at 95°C, 30 cycles at 95°C for 30 s, 30 s at 65°C annealing temperature and 60 s at 72°C and the final extension step for 5 min at 72°C. After amplification, the 385-bp PCR products were analyzed in a 3% agarose gel and digested with 1 μl of FastDigest NlaIII (Hin1II) restriction endonuclease (Fermentas, Hanover, MD, USA) in a final volume of 15 μl for 5 min at 37°C. PCR products with a G at the polymorphic site were digested into two fragments of 211 and 174 bp, while those with an A at this site were not cleaved because of the absence of a NlaIII restriction site. The G/G genotype produced two fragments (211 and 174 bp), whereas the G/A genotype produced three fragments (385, 211, 174 bp) and the homozygote A/A resulted in one fragment of 385 bp. Digested PCR products were separated by electrophoresis on a 8% polyacrylamide gel and visualized by ethidium bromide staining using a GeneRuler ™ 100 bp (Fermentas, Hanover, MD, USA) as a size marker. A representative gel for this polymorphism is presented in Supplementary Fig. 2.

All PCR amplifications were conducted in a C1000 Thermal Cycler (Bio-Rad Laboratories, Hercules, CA, USA). All experiments included positive and negative controls for each polymorphism. We randomly selected 10% of 383 samples for repeated assays and the results were 100% concordant.

Statistical analysis

All statistical analyses were performed using STATISTICA 9.0 software (Statsoft, Tulsa, OK, USA) and SigmaPlot v11.0 software (Systat Software, Inc., San Jose, CA, USA). To compare the distributions of demographic variables and selected risk factors between patients and controls χ² test was used. Hardy–Weinberg equilibrium was checked using χ² test to compare the observed genotype frequencies with the expected frequencies among the case and control subjects. The χ² analysis was also used to test the significance of the differences between distributions of genotypes and alleles in AMD patients and controls. The association between case–control status and each polymorphism, measured by the odds ratio (OR) and its corresponding 95% confidence interval (CI), was estimated using an unconditional multiple logistic regression model, both with and without adjustment for sex, age, smoking habit, living environment (rural vs. urban areas) and family status of AMD. Tobacco smoking habit was categorized in terms of never smokers and smokers, including current and former smokers. Stratified analysis according to age, sex and family status of AMD was also conducted. To study a possible gene–environment interaction, the patients and controls were divided into subgroups depending on sex, family history and age. Unconditional logistic regression analyses were also performed to assess the association between genotypes and risk for AMD after stratification of the individuals according to sex, age and family status of AMD.

Results

The PCR–RFLP and ASO-PCR analyses were successful for all controls, but we were not able to determine the genotypes of both polymorphisms for seven AMD patients.

Characteristics of the study population

The characteristic of the patients and controls is presented in Supplementary Table 1. For six AMD patients we had not information about sex and age. There were significantly more subjects with negative family history for AMD among the controls than patients (96% vs. 80%, P < 0.001). Therefore, these variables were further adjusted for in the multivariate logistic regression model to control for possible confounding of the main effects of the polymorphisms.

Relationship between age, sex, tobacco smoking, living environment and AMD in family and the risk of AMD independent of genotype

We investigated relationship between age, sex, smoking, living environment and family history of AMD and the risk of AMD independently of genotype. We compared controls and AMD patients according to these parameters (Supplementary Table 2). Male sex (OR 1.78, 95% CI 1.05–3.02; P = 0.031), age (7.77, 95% CI 2.73–22.12; P < 0.001) and family history of AMD (OR 6.80, 95% CI 2.02–22.90; P = 0.002) significantly increased the risk of AMD.

Polymorphisms of the HMOX-1 and -2 genes and the risk of AMD

The genotype and allele distributions of the 19G>C-HMOX1 and −42 + 1444A>G-HMOX2 polymorphisms in AMD patients and controls are summarized in Supplementary Table 3. The genotype frequencies were all in agreement with the Hardy–Weinberg equilibrium calculated for the cases and controls (P > 0.05, data not show). As shown in Supplementary Table 3 the difference in the frequency distributions of genotypes between the cases of dry AMD and controls was statistically significant (P < 0.05). A weak association between dry AMD occurrence and the G/A genotype of the −42 + 1444A>G-HMOX2 polymorphism was found, whereas the homozygous variant G/G was associated with a significant reduction in dry AMD risk. Moreover, the A allele of this polymorphism was positively correlated with the occurrence of dry AMD, whereas the G allele had a protective effect against dry AMD. We did not observe any association between the occurrence of AMD its dry or wet form and genotypes/alleles of the other polymorphism.

Additionally, we studied the distribution of genotypes and alleles of the polymorphisms in the group of wet AMD patients in comparison with dry AMD patients (Supplementary Table 4). Such comparison was considered as a measure of AMD progression. The G/C genotype and the C of the 19G>C-HMOX1 polymorphism and the G/G genotype and the G allele of the −42 + 1444A>G-HMOX2 polymorphism increased progression of AMD. Furthermore, the G/G genotype and the G allele of the 19G>C-HMOX1 polymorphism and the G/A genotype and the A allele of the HMOX2 SNP may have a protective effect against disease progression.

Gene–gene interaction and AMD occurrence and progression

We also assessed the association between the occurrence and progression of AMD and combined genotypes of the 19G>C-HMOX1 and −42 + 1444A>G-HMOX2 polymorphisms. The distribution of combined genotypes of these polymorphisms are shown in Supplementary Tables 5 and 6. The presence of the combined G/G–G/A genotype increased the risk of dry AMD, while the presence of the G/G–G/G genotype decreased such risk.

Gene–gene interaction resulted in a slight increase in the AMD progression from dry to wet form with the combined G/G–G/G genotype, whereas the G/G genotype of the 19G>C-HMOX1 polymorphism and the A/G genotype of the 42 + 1444A>G-HMOX2 polymorphism were associated with a protective effect against progression of the disease.

Gene–environment interaction and AMD occurrence and progression

The association between AMD and the 19G>C-HMOX1 and the −42 + 1444A>G-HMOX2 polymorphism was subjected to stratification analysis, but only data for the −42 + 1444A>G-HMOX2 are presented in Supplementary Table 7 because such analysis for other polymorphism did not yield any significant result. In stratification analysis, the G/G genotype was associated with a significantly decreased risk of AMD in subgroups of subjects of 61 years and older, women and subjects with no AMD history in family. Moreover, the G/A genotype was associated with a significantly increased risk of AMD in subgroups of patients older than 61 years, women and subjects with a negative family history for AMD.

Discussion

AMD is the leading cause of irreversible blindness in the elderly in developed countries. As the elderly population grows, age-related diseases, including AMD, become more prevalent [28]. Approximately 25–30 million people globally are affected by AMD and this number is expected to triple over the next 25 years. The development of AMD is a gradual process. Its progression occurs over an extended time frame, with the incidence of the disease increasing dramatically above 70 years old. Aging is associated with changes in the retina, including alterations in RPE cellular size and shape, thickening of BM, thickening of the internal limiting membrane and a decrease in retinal neuronal elements [29]. Generally, two types of AMD can be considered: dry and wet [30], wherein dry AMD accounts for 80–90% and wet AMD for 10–20% of all cases. The majority of vision loss (~90%) is attributed to wet AMD, which is the last and most severe phase of macular degeneration progress [31]. The relationship between dry and wet forms of AMD is not definite and dry AMD may or may not eventually develop into the wet form. It is estimated that dry form progresses to the wet form in approximately 10% of cases. Therefore, our attitude comparing the percentage of wet and dry cases as a marker of the progression of AMD is limited.

Although the etiology and pathogenesis of AMD remain largely unclear, a several genetic factors in combination with environmental and lifestyle factors may be involved in them. Results of several studies have shown that the most recognized factors are advanced age, cigarette smoking, race and diet [8, 9]. In the first stage of our study, we examined the relationship between clinical, environmental and life style parameters and risk of AMD independently of genotype. Our findings suggest that age, sex and family status of AMD are risk factors in the development of the disease. This is in general agreement with results obtained by others [11, 32]. However, we did not find any association between tobacco smoking and AMD. At present we have not any direct explanation of this fact except that tobacco smoking may be one of the factor of AMD pathogenesis and not the sole reason of AMD and the role of this factor depends on the population. Therefore, more detailed characteristics of the population enrolled in the present study might clear this issue.

Mitochondria belong to the major sources of ROS in human lens epithelial cells. A growing body of evidence suggests that mitochondria have a central role in age-related disorders, including retinal diseases. Mitochondria-associated diseases are recognized as a variety of many important clinical entities that develop as a consequence of abnormalities in energy supply, generators of ROS and initiators of apoptotic processes [33].

During the aging, the balance between the generation and clearance of ROS can be disturbed resulting in an oxidative damage to outer segments of photoreceptors and progressive deterioration of the RPE [34]. Several enzymes are important in the formation and reduction of ROS. The HO-1 and HO-2 may have an important role in diseases that involve oxidative stress, including AMD. Frank et al. [20] observed reduction in both HO-1 and HO-2 protein in old age and in RPE cells from eyes with evidence of neovascular AMD. Likewise, Miyamura et al. [35] found an age-related decline in HO-1 mRNA expression in the macula and the periphery of human subjects. Interestingly, an overexpression of HO-1 in photoreceptors protected them from subsequent cellular damage caused by an intense light exposure [36].

In general, the role of genetic variability in AMD has been extensively studied. Numerous case–control studies have confirmed the association between SNPs and AMD [21–26]. Recent studies also report a significant association between the genetic polymorphism of genes encoding antioxidant enzymes and development of AMD [37, 38]. Polymorphisms in the HMOX1 and HMOX2 genes have not been studied in AMD patients so far. The human HMOX-1 gene is located at 22q12 and consists of five exons spanning ~14 kb separated by four introns [39, 40]. We analyzed a G to C transversion located at the +19 cDNA position in the first exon of the HMOX-1 gene. This polymorphism causes change of aspartic acid to histidine at the amino acid position 7 of the HO-1 protein, but the clinical role of this change is unknown. A non-synonymous SNP site with a low gene diversity, relative to other SNP sites in the same gene that do not cause amino acid changes, might constitute a good candidate allele for disease association [41]. Such substitution may directly affect the structure and stability of protein with a serious phenotypic consequences [42, 43]. We found that the occurrence of the G/C genotype and the C allele of the c.19G>C polymorphism of the HMOX1 gene increased the progression of AMD. Other studies showed that this SNP was not associated with Alzheimer’s disease in Japanese population and Parkinson’s disease in German population [44, 45]. The other polymorphism, −42 + 1444A>G-HMOX2, is located in the 5′ flanking region of the gene, consisting of five exons spanning ~12 kb [39, 40]. HO-1 (32 kDa) and HO-2 (36 kDa) share roughly 40% amino acid homology [46].

In summary, our results suggest that the 19G>C polymorphism of the HMOX1 gene and the −42 + 1444A>G polymorphism of the HMOX2 gene may be associated with individual susceptibility to AMD. The identification of SNPs that are associated with variation in gene expression in the retina and in the eye in general might help to identify specific molecular signatures of AMD and ultimately help to improve quality of life of AMD patients.

Conclusion

In conclusion, our findings suggest that the 19G>C-HMOX1 polymorphism and the −42 + 1444A>G-HMOX2 polymorphism may be linked with the development of AMD.

Electronic supplementary material

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