Skip to main content
Nucleic Acids Research logoLink to Nucleic Acids Research
. 1980 Feb 11;8(3):507–527. doi: 10.1093/nar/8.3.507

Repeating oligonucleosomal units. A new element of chromatin structure.

A V Itkes, B O Glotov, L G Nikolaev, S R Preem, E S Severin
PMCID: PMC327286  PMID: 7443535

Abstract

Supranucleosomal chromatin structure has been analysed by the use of histone H1 polymers crosslinked in nuclei and extended chromatin with bifunctional reagents methyl-4-mercaptobutyrimidate (MMB) and dimethyl suberimidate dihydrochloride. Almost pure H1 homopolymers were obtained in milligram amounts and examined for the distribution in molecular weights. The H1 homopolymer molecules both from nuclei and chromatin have been found to be integer multiples of an elementary structure (called "clisone") consisting of 12 histone H1 molecules. This finding strongly suggests that nucleosomal chains of chromatin are not uniform but rather organized as repeating oligonucleosomal units each consisting of 12 nucleosomes. Correlation between oligonucleosomal structures in nuclei and chromatin implies that a linearized nucleosomal chain retains the information on chromatin superstructure. The relation of the disclosed 12-nucleosome units to superbeads (nucleomeres) and other structures is discussed.

Full text

PDF
507

Images in this article

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Bonner W. M. Proximity and accessibility studies of histones in nuclei and free nucleosomes. Nucleic Acids Res. 1978 Jan;5(1):71–85. doi: 10.1093/nar/5.1.71. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Bram S., Butler-Browne G., Bradbury E. M., Baldwin J., Reiss C., Ibel K. Chromatin neutron and X-ray diffraction studies and high resolution melting of DNA-histone complexes. Biochimie. 1974;56(6-7):987–994. doi: 10.1016/s0300-9084(74)80519-5. [DOI] [PubMed] [Google Scholar]
  3. Dupraw E. J. THE ORGANIZATION OF NUCLEI AND CHROMOSOMES IN HONEYBEE EMBRYONIC CELLS. Proc Natl Acad Sci U S A. 1965 Jan;53(1):161–168. doi: 10.1073/pnas.53.1.161. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Felsenfeld G. Chromatin. Nature. 1978 Jan 12;271(5641):115–122. doi: 10.1038/271115a0. [DOI] [PubMed] [Google Scholar]
  5. Finch J. T., Klug A. Solenoidal model for superstructure in chromatin. Proc Natl Acad Sci U S A. 1976 Jun;73(6):1897–1901. doi: 10.1073/pnas.73.6.1897. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. GALL J. Chromosome fibers from an interphase nucleus. Science. 1963 Jan 11;139(3550):120–121. doi: 10.1126/science.139.3550.120. [DOI] [PubMed] [Google Scholar]
  7. Glotov B. O., Itkes A. V., Nikolaev L. G., Severin E. S. Evidence for the close proximity of histones H1 and H3 in chromatin of intact nuclei. FEBS Lett. 1978 Jul 1;91(1):149–152. doi: 10.1016/0014-5793(78)80037-4. [DOI] [PubMed] [Google Scholar]
  8. Glotov B. O., Nikolaev L. G., Severin E. S. Histone H1--DNA interaction. On the mechanism of DNA strands crosslinking by histone H1. Nucleic Acids Res. 1978 Jul;5(7):2587–2605. doi: 10.1093/nar/5.7.2587. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Goodwin G. H., Nicolas R. H., Johns E. W. A quantitative analysis of histone H1 in rabbit thymus nuclei. Biochem J. 1977 Nov 1;167(2):485–488. doi: 10.1042/bj1670485. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Hardison R. C., Eichner M. E., Chalkley R. An approach to histone nearest neighbours in extended chromatin. Nucleic Acids Res. 1975 Oct;2(10):1751–1770. doi: 10.1093/nar/2.10.1751. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Hardison R. C., Zeitler D. P., Murphy J. M., Chalkley R. Histone neighbors in nuclei and extended chromatin. Cell. 1977 Oct;12(2):417–427. doi: 10.1016/0092-8674(77)90118-0. [DOI] [PubMed] [Google Scholar]
  12. Kiryanov G. I., Manamshjan T. A., Polyakov V. Y., Fais D., Chentsov J. S. Levels of granular organization of chromatin fibres. FEBS Lett. 1976 Sep 1;67(3):323–327. doi: 10.1016/0014-5793(76)80557-1. [DOI] [PubMed] [Google Scholar]
  13. Kornberg R. D. Structure of chromatin. Annu Rev Biochem. 1977;46:931–954. doi: 10.1146/annurev.bi.46.070177.004435. [DOI] [PubMed] [Google Scholar]
  14. Laemmli U. K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 1970 Aug 15;227(5259):680–685. doi: 10.1038/227680a0. [DOI] [PubMed] [Google Scholar]
  15. Oudet P., Spadafora C., Chambon P. Nucleosome structure II: structure of the SV40 minichromosome and electron microscopic evidence for reversible transitions of the nucleosome structure. Cold Spring Harb Symp Quant Biol. 1978;42(Pt 1):301–312. doi: 10.1101/sqb.1978.042.01.032. [DOI] [PubMed] [Google Scholar]
  16. Panyim S., Chalkley R. High resolution acrylamide gel electrophoresis of histones. Arch Biochem Biophys. 1969 Mar;130(1):337–346. doi: 10.1016/0003-9861(69)90042-3. [DOI] [PubMed] [Google Scholar]
  17. Renz M. Heterogeneity of the chromosome fiber. Nucleic Acids Res. 1979 Jun 25;6(8):2761–2767. doi: 10.1093/nar/6.8.2761. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. Renz M., Nehls P., Hozier J. Involvement of histone H1 in the organization of the chromosome fiber. Proc Natl Acad Sci U S A. 1977 May;74(5):1879–1883. doi: 10.1073/pnas.74.5.1879. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Shaw B. R., Herman T. M., Kovacic R. T., Beaudreau G. S., Van Holde K. E. Analysis of subunit organization in chicken erythrocyte chromatin. Proc Natl Acad Sci U S A. 1976 Feb;73(2):505–509. doi: 10.1073/pnas.73.2.505. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. Traut R. R., Bollen A., Sun T. T., Hershey J. W., Sundberg J., Pierce L. R. Methyl 4-mercaptobutyrimidate as a cleavable cross-linking reagent and its application to the Escherichia coli 30S ribosome. Biochemistry. 1973 Aug 14;12(17):3266–3273. doi: 10.1021/bi00741a019. [DOI] [PubMed] [Google Scholar]
  21. Walker J. M., Parker B. M., Johns E. W. Isolation and partial sequence of the cyanogen bromide peptides from calf thymus non-histone chromosomal protein HMG 1. Int J Pept Protein Res. 1978 Nov;12(5):269–276. doi: 10.1111/j.1399-3011.1978.tb02897.x. [DOI] [PubMed] [Google Scholar]
  22. Whitlock J. P., Jr, Simpson R. T. Preparation and physical characterization of a homogeneous population of monomeric nucleosomes from HeLa cells. Nucleic Acids Res. 1976 Sep;3(9):2255–2266. doi: 10.1093/nar/3.9.2255. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Worcel A. Molecular architecture of the chromatin fiber. Cold Spring Harb Symp Quant Biol. 1978;42(Pt 1):313–324. doi: 10.1101/sqb.1978.042.01.033. [DOI] [PubMed] [Google Scholar]

Articles from Nucleic Acids Research are provided here courtesy of Oxford University Press

RESOURCES