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. 1981 Oct 10;9(19):4939–4950. doi: 10.1093/nar/9.19.4939

Structural requirements of polynucleotides for the activation of (2' - 5')An polymerase and protein kinase.

C Baglioni, M A Minks, E De Clercq
PMCID: PMC327490  PMID: 6273790

Abstract

Two enzymatic pathways are involved in the inhibitory effects of double-stranded (ds)RNA on protein synthesis in cell extracts derived from interferon-treated human fibroblasts or HeLa cells, an oligonucleotide polymerase that synthesizes (2'-5')An from ATP and a protein kinase that phosphorylates the alpha subunit of initiation factor eIF-2 as well as a polypeptide of Mr = 72,000. We have now evaluated the activation of both the (2'-5')An polymerase and protein kinase by a large variety of polynucleotides, triple-stranded and synthetic dsRNAs, homopolymers, alternating copolymers, triple-stranded polymers, purine-purine duplexes and purine-pyrimidine duplexes with modifications at either the pyrimidine or ribose moieties. All these polynucleotides have been the subject of previous interferon induction studies. Some polynucleotides, i.e. (I)n.(C)n and mycophage dsRNA, which have been recognized as excellent interferon inducers, were also potent activators of both (2'-5')An polymerase and protein kinase, whereas non-inducers such as (A)n. (X)n and (A)n. (br5U)n did not activate either the kinase or the polymerase. However, some polymers like (I)n.(br5C)n, (difl)n(C)n and (dIcl)n (C)n, while potent interferon inducers and kinase activators, behaved poorly as activators of the (2'-5')An polymerase. Other polymers, i.e. (dAfl)n (U)n and (A)n.(U)nl (I)n, that do not induce interferon, activated the kinase but not the polymerase. Finally, (I)n (s2c)n, a relatively potent interferon inducer, did not activate either kinase or polymerase. These findings indicate that there is no simple relationship between the interferon-inducing ability of dsRNAs and their stimulating effects on (2'-5')An polymerase and protein kinase activity.

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  1. Baglioni C. Interferon-induced enzymatic activities and their role in the antriviral state. Cell. 1979 Jun;17(2):255–264. doi: 10.1016/0092-8674(79)90151-x. [DOI] [PubMed] [Google Scholar]
  2. Burnett J. P., Frank B. H., Douthart R. J. Ionic strength effects on the stability and conformation of Penicillium chrysogenum mycophage double stranded RNA. Nucleic Acids Res. 1975 Jun;2(6):759–771. doi: 10.1093/nar/2.6.759. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Clercq E. D., Edy V. G., Torrence P. F., Waters J. A., Witkop B. Antiviral activity of poly(7-deazainosinic acid)-derived complexes in vitro and in vivo. Mol Pharmacol. 1976 Nov;12(6):1045–1051. [PubMed] [Google Scholar]
  4. Content J., Lebleu B., De Clercq E. Differential effects of various double-stranded RNAs on protein synthesis in rabbit reticulocyte lysates. Biochemistry. 1978 Jan 10;17(1):88–94. doi: 10.1021/bi00594a012. [DOI] [PubMed] [Google Scholar]
  5. De Clercq E., Janik B. Antiviral activity of polynucleotides: poly(2'-fluoro-2'-deoxyuridylic acid). Biochim Biophys Acta. 1973 Sep 28;324(1):50–56. doi: 10.1016/0005-2787(73)90249-9. [DOI] [PubMed] [Google Scholar]
  6. De Clercq E., Stollar B. D., Hobbs J., Fukui T., Kakiuchi N., Ikehara M. Interferon induction by two 2'-modified double-helical RNAs, poly(2'-fluoro-2'-deoxyinosinic acid) x poly(cytidylic acid) and poly(2'-chloro-2'-deoxyinosinic acid) x poly(cytidylic acid). Eur J Biochem. 1980;107(1):279–288. doi: 10.1111/j.1432-1033.1980.tb04648.x. [DOI] [PubMed] [Google Scholar]
  7. De Clercq E., Stollar B. D., Thang M. N. Interferon inducing activity of polyinosinic acid. J Gen Virol. 1978 Jul;40(1):203–212. doi: 10.1099/0022-1317-40-1-203. [DOI] [PubMed] [Google Scholar]
  8. De Clercq E., Torrence P. F., De Somer P., Witkop B. Biological, biochemical, and physicochemical evidence for the existence of the polyadenylic-polyuridylic-polyinosinic acid triplex. J Biol Chem. 1975 Apr 10;250(7):2521–2531. [PubMed] [Google Scholar]
  9. De Clercq E., Torrence P. F., Witkop B. Interferon induction by synthetic polynucleotides: importance of purine N-7 and strandwise rearrangement. Proc Natl Acad Sci U S A. 1974 Jan;71(1):182–186. doi: 10.1073/pnas.71.1.182. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Epstein D. A., Torrence P. F., Friedman R. M. Double-stranded RNA inhibits a phosphoprotein phosphatase present in interferon-treated cells. Proc Natl Acad Sci U S A. 1980 Jan;77(1):107–111. doi: 10.1073/pnas.77.1.107. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Greene J. J., Alderfer J. L., Tazawa I., Tazawa S., Ts'o P. O., O'Malley J. A., Carter W. A. Interferon induction and its dependence on the primary and secondary structure of poly(inosinic acid).poly(cytidylic acid). Biochemistry. 1978 Oct 3;17(20):4214–4220. doi: 10.1021/bi00613a016. [DOI] [PubMed] [Google Scholar]
  12. Hunter T., Hunt T., Jackson R. J., Robertson H. D. The characteristics of inhibition of protein synthesis by double-stranded ribonucleic acid in reticulocyte lysates. J Biol Chem. 1975 Jan 25;250(2):409–417. [PubMed] [Google Scholar]
  13. Ikehara M., Fukui T., Kakiuchi N. Polynucleotides. L. Synthesis and properties of poly (2'-chloro-2'-deoxyadenylic acid) and poly (2'-bromo-2'-deoxyadenylic acid). Nucleic Acids Res. 1977 Dec;4(12):4249–4260. doi: 10.1093/nar/4.12.4249. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Ikehara M., Fukui T., Kakiuchi N. Polynucleotides. LII. Synthesis and properties of poly(2'-deoxy-2'-fluoroadenylic acid). Nucleic Acids Res. 1978 Jun;5(6):1877–1887. doi: 10.1093/nar/5.6.1877. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Ikehara M., Kakiuchi N., Fukui T. Polynucleotides. LVI. Synthesis and properties of poly(2-deoxy-2'-fluoroinosinic acid). Nucleic Acids Res. 1978 Sep;5(9):3315–3324. doi: 10.1093/nar/5.9.3315. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Kakiuchi N., Fukui T., Ikehara M. Polynucleotides. LVII. Synthesis and properties of poly (2'-chloro-2'-deoxyinosinic acid). Nucleic Acids Res. 1979 Jun 11;6(7):2627–2636. doi: 10.1093/nar/6.7.2627. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Kerr I. M., Brown R. E., Ball L. A. Increased sensitivity of cell-free protein synthesis to double-stranded RNA after interferon treatment. Nature. 1974 Jul 5;250(461):57–59. doi: 10.1038/250057a0. [DOI] [PubMed] [Google Scholar]
  18. Minks M. A., Benvin S., Baglioni C. Mechanism of pppA(2'p5'A)n2'p5'AOH synthesis in extracts of interferon-treated HeLa cells. J Biol Chem. 1980 Jun 10;255(11):5031–5035. [PubMed] [Google Scholar]
  19. Minks M. A., Benvin S., Maroney P. A., Baglioni C. Metabolic stability of 2' 5'oligo (A) and activity of 2' 5'oligo (A)-dependent endonuclease in extracts of interferon-treated and control HeLa cells. Nucleic Acids Res. 1979 Feb;6(2):767–780. doi: 10.1093/nar/6.2.767. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. Minks M. A., Benvin S., Maroney P. A., Baglioni C. Synthesis of 2'5'-oligo(A) in extracts of interferon-treated HeLa cells. J Biol Chem. 1979 Jun 25;254(12):5058–5064. [PubMed] [Google Scholar]
  21. Minks M. A., West D. K., Benvin S., Baglioni C. Structural requirements of double-stranded RNA for the activation of 2',5'-oligo(A) polymerase and protein kinase of interferon-treated HeLa cells. J Biol Chem. 1979 Oct 25;254(20):10180–10183. [PubMed] [Google Scholar]
  22. Minks M. A., West D. K., Benvin S., Greene J. J., Ts'o P. O., Baglioni C. Activation of 2',5'-oligo(A) polymerase and protein kinase of interferon-treated HeLa cells by 2'-O-methylated poly (inosinic acid) . poly(cytidylic acid), Correlations with interferon-inducing activity. J Biol Chem. 1980 Jul 10;255(13):6403–6407. [PubMed] [Google Scholar]
  23. Reuss K., Scheit K. H., Saiko O. Induction of interferon by polyribonucleotides containing thiopyrimidines. Nucleic Acids Res. 1976 Oct;3(10):2861–2875. doi: 10.1093/nar/3.10.2861. [DOI] [PMC free article] [PubMed] [Google Scholar]
  24. Schmidt A., Chernajovsky Y., Shulman L., Federman P., Berissi H., Revel M. An interferon-induced phosphodiesterase degrading (2'-5') oligoisoadenylate and the C-C-A terminus of tRNA. Proc Natl Acad Sci U S A. 1979 Oct;76(10):4788–4792. doi: 10.1073/pnas.76.10.4788. [DOI] [PMC free article] [PubMed] [Google Scholar]
  25. Schmidt A., Zilberstein A., Shulman L., Federman P., Berissi H., Revel M. Interferon action: isolation of nuclease F, a translation inhibitor activated by interferon-induced (2'-5') oligo-isoadenylate. FEBS Lett. 1978 Nov 15;95(2):257–264. doi: 10.1016/0014-5793(78)81006-0. [DOI] [PubMed] [Google Scholar]
  26. Stark G. R., Dower W. J., Schimke R. T., Brown R. E., Kerr I. M. 2-5A synthetase: assay, distribution and variation with growth or hormone status. Nature. 1979 Mar 29;278(5703):471–473. doi: 10.1038/278471a0. [DOI] [PubMed] [Google Scholar]
  27. Torrence P. F., De Clercq E. Polyadenylic-polyxanthylic-polyuridylic acid triple helix. Biochemistry. 1977 Mar 22;16(6):1039–1043. doi: 10.1021/bi00625a002. [DOI] [PubMed] [Google Scholar]
  28. Torrence P. F., De Clercq E., Waters J. A., Witkop B. A potent interferon inducer derived from poly (7-deazainosinic acid). Biochemistry. 1974 Oct 8;13(21):4400–4408. doi: 10.1021/bi00718a025. [DOI] [PubMed] [Google Scholar]
  29. Torrence P. F., De Clercq E., Witkop B. The interaction of polyxanthylic acid with polyadenylic acid. Biochim Biophys Acta. 1977 Mar 2;475(1):1–6. doi: 10.1016/0005-2787(77)90332-x. [DOI] [PubMed] [Google Scholar]
  30. Torrence P. F., Friedman R. M. Are double-stranded RNA-directed inhibition of protein synthesis in interferon-treated cells and interferon induction related phenomena? J Biol Chem. 1979 Feb 25;254(4):1259–1267. [PubMed] [Google Scholar]
  31. West D. K., Baglioni C. Induction of interferon in HeLa cells of a protein kinase activated by double-stranded RNA. Eur J Biochem. 1979 Nov;101(2):461–468. doi: 10.1111/j.1432-1033.1979.tb19740.x. [DOI] [PubMed] [Google Scholar]
  32. de Clercq E., Torrence P. F., Stollar B. D., Hobbs J., Fukui T., Kakiuchi N., Ikehara M. Interferon induction by a 2'-modified double-helical RNA, poly(2'-azido-2'-deoxyinosinic acid) . polycytidylic acid. Eur J Biochem. 1978 Aug 1;88(2):341–349. doi: 10.1111/j.1432-1033.1978.tb12455.x. [DOI] [PubMed] [Google Scholar]

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