Abstract
The title compound, C12H16ClNO2S, adopts an L-shaped conformation, with the central C—S—N—C torsion angle being −78.0 (2)°. The cyclohexyl ring adopts a chair conformation. In the crystal, adjacent molecules are connected by pairs of N—H⋯O hydrogen bonds around an inversion centre, forming cyclic dimers [graph set R 2 2(8)].
Related literature
For background to the pharmacological uses of sulfonamides, see: Korolkovas (1988 ▶); Mandell & Sande (1992 ▶). For related structures, see: Sharif et al. (2011 ▶); Khan et al. (2010 ▶); John et al. (2010 ▶). For ring conformational analysis, see: Cremer & Pople (1975 ▶).
Experimental
Crystal data
C12H16ClNO2S
M r = 273.78
Monoclinic,
a = 11.1226 (5) Å
b = 6.2490 (2) Å
c = 19.8635 (9) Å
β = 96.505 (2)°
V = 1371.73 (10) Å3
Z = 4
Mo Kα radiation
μ = 0.42 mm−1
T = 296 K
0.29 × 0.15 × 0.11 mm
Data collection
Bruker APEXII CCD diffractometer
12714 measured reflections
3365 independent reflections
2075 reflections with I > 2σ(I)
R int = 0.030
Refinement
R[F 2 > 2σ(F 2)] = 0.053
wR(F 2) = 0.150
S = 1.03
3365 reflections
157 parameters
1 restraint
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.39 e Å−3
Δρmin = −0.25 e Å−3
Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON (Spek, 2009 ▶).
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812001870/hg5164sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812001870/hg5164Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812001870/hg5164Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
---|---|---|---|---|
N1—H1N⋯O1i | 0.85 (4) | 2.05 (4) | 2.891 (4) | 170 (3) |
Symmetry code: (i) .
Acknowledgments
The authors are grateful to the Higher Education Commission (HEC), Pakistan, for providing funds for the single-crystal XRD facilities at GC University Lahore.
supplementary crystallographic information
Comment
Sulfonamide group containing drugs are extensively used for the treatment of certain infections caused by Gram-positive and Gram-negative microorganisms (Korolkovas, 1988; Mandell & Sande, 1992). In continuation of our on going structural studies of cyclohexylamine and sulfonamides synthesis (John et al., 2010; Khan et al., 2010; Sharif et al., 2011), herein the crystal structure of title compound (I) is described.
In (I), (Fig. 1), the S atom has a distorted tetrahedral geometry within a CNO2 donor set [maximum deviation: O—S—O = 119.45 (12)°]. The central C6–S1–N1–C7 torsion angle is -78.0 (2)°. The C7–C12 cyclohexyl ring adopts a chair conformation, with puckering parameters (Cremer & Pople, 1975) Q = 0.536 (4) Å, θ = 180.0 (4) °, φ = 196 (16) °.
In the crystal, two adjacent molecules are linked by a pair of N—H···O hydrogen bonds, forming an inversion dimer with an R22(8) ring motif (Table 1, Fig. 2).
Experimental
To 115 µl (1 mmol) of cyclohexylamine in 10 ml distilled water, was added 211 mg (1 mmol) of 4-chlorobenzenesulfonyl chloride while maintaining the pH of reaction mixture at 8 by using 3% sodium carbonate solution. Consumption of the reactants was confirmed by TLC. The pH of reaction mixture was adjusted by 3 N HCl at 3. Precipitates formed, washed with water and crystallized from methanol.
Refinement
The NH H–atom was located in a difference Fourier map and isotropically refined with a distance restraint: N—H = 0.86 (2) Å. C-bound H atoms were placed in calculated positions with C—H distances in the range 0.93–0.98 Å and and were refined using a riding model with Uiso(H) = 1.2Ueq(C). In the final refinement two low angle reflections evidently effected by the beam stop were omitted, i.e. 0 0 2 and 1 0 0.
Figures
Fig. 1.
The title molecule, showing the atom numbering scheme. Displacement ellipsoids for non-H atoms are drawn at the 30% probability level.
Fig. 2.
The crystal packing of (I) down b axis, showing the molecules are linked into dimers by pairs of N—H ··· O hydrogen bonds, forming R22(8) graph-set motif. Hydrogen atoms not involved in hydrogen bonding have been omitted for clarity.
Crystal data
C12H16ClNO2S | F(000) = 576 |
Mr = 273.78 | Dx = 1.326 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71069 Å |
Hall symbol: -P 2ybc | Cell parameters from 3062 reflections |
a = 11.1226 (5) Å | θ = 2.6–21.6° |
b = 6.2490 (2) Å | µ = 0.42 mm−1 |
c = 19.8635 (9) Å | T = 296 K |
β = 96.505 (2)° | Needle, light brown |
V = 1371.73 (10) Å3 | 0.29 × 0.15 × 0.11 mm |
Z = 4 |
Data collection
Bruker APEXII CCD diffractometer | 2075 reflections with I > 2σ(I) |
Radiation source: sealed tube | Rint = 0.030 |
graphite | θmax = 28.3°, θmin = 3.4° |
φ and ω scans | h = −14→14 |
12714 measured reflections | k = −6→8 |
3365 independent reflections | l = −26→26 |
Refinement
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.053 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.150 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0613P)2 + 0.526P] where P = (Fo2 + 2Fc2)/3 |
3365 reflections | (Δ/σ)max < 0.001 |
157 parameters | Δρmax = 0.39 e Å−3 |
1 restraint | Δρmin = −0.24 e Å−3 |
Special details
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.97047 (9) | 0.63719 (19) | 0.09885 (6) | 0.1159 (5) | |
S1 | 0.67445 (5) | 0.02579 (10) | 0.26455 (3) | 0.0538 (2) | |
O1 | 0.57744 (18) | −0.0412 (3) | 0.21563 (11) | 0.0788 (8) | |
O2 | 0.75531 (17) | −0.1301 (3) | 0.29647 (11) | 0.0710 (7) | |
N1 | 0.61305 (18) | 0.1518 (3) | 0.32146 (11) | 0.0527 (7) | |
C1 | 0.7127 (2) | 0.3981 (4) | 0.19816 (13) | 0.0581 (9) | |
C2 | 0.7777 (3) | 0.5312 (4) | 0.16141 (14) | 0.0650 (9) | |
C3 | 0.8901 (3) | 0.4698 (5) | 0.14686 (14) | 0.0654 (10) | |
C4 | 0.9396 (2) | 0.2788 (5) | 0.16961 (16) | 0.0733 (11) | |
C5 | 0.8750 (2) | 0.1454 (4) | 0.20712 (14) | 0.0606 (9) | |
C6 | 0.7611 (2) | 0.2037 (4) | 0.22098 (12) | 0.0465 (7) | |
C7 | 0.6789 (2) | 0.2145 (4) | 0.38711 (12) | 0.0541 (8) | |
C8 | 0.7329 (3) | 0.4325 (5) | 0.38666 (16) | 0.0829 (11) | |
C9 | 0.7924 (4) | 0.4979 (7) | 0.45609 (18) | 0.1069 (17) | |
C10 | 0.7084 (4) | 0.4802 (9) | 0.5084 (2) | 0.117 (2) | |
C11 | 0.6528 (5) | 0.2674 (10) | 0.50951 (18) | 0.135 (2) | |
C12 | 0.5920 (4) | 0.1970 (7) | 0.44002 (17) | 0.1033 (16) | |
H1 | 0.63600 | 0.43810 | 0.20780 | 0.0700* | |
H1N | 0.555 (3) | 0.234 (6) | 0.3060 (19) | 0.1390* | |
H2 | 0.74580 | 0.66260 | 0.14640 | 0.0780* | |
H4 | 1.01630 | 0.23970 | 0.15970 | 0.0880* | |
H5 | 0.90830 | 0.01600 | 0.22310 | 0.0730* | |
H7 | 0.74450 | 0.11150 | 0.39850 | 0.0650* | |
H8A | 0.67010 | 0.53500 | 0.37150 | 0.0990* | |
H8B | 0.79270 | 0.43550 | 0.35470 | 0.0990* | |
H9A | 0.86230 | 0.40740 | 0.46850 | 0.1280* | |
H9B | 0.82060 | 0.64450 | 0.45420 | 0.1280* | |
H10A | 0.75200 | 0.51000 | 0.55240 | 0.1410* | |
H10B | 0.64520 | 0.58700 | 0.49970 | 0.1410* | |
H11A | 0.59300 | 0.26840 | 0.54140 | 0.1620* | |
H11B | 0.71460 | 0.16380 | 0.52540 | 0.1620* | |
H12A | 0.56470 | 0.05020 | 0.44260 | 0.1240* | |
H12B | 0.52180 | 0.28630 | 0.42710 | 0.1240* |
Atomic displacement parameters (Å2)
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0867 (7) | 0.1367 (9) | 0.1293 (9) | −0.0197 (6) | 0.0339 (6) | 0.0505 (7) |
S1 | 0.0456 (4) | 0.0438 (3) | 0.0725 (4) | −0.0069 (3) | 0.0087 (3) | −0.0065 (3) |
O1 | 0.0634 (12) | 0.0815 (13) | 0.0904 (14) | −0.0310 (10) | 0.0034 (11) | −0.0211 (11) |
O2 | 0.0691 (12) | 0.0436 (9) | 0.1030 (15) | 0.0083 (9) | 0.0210 (11) | 0.0082 (9) |
N1 | 0.0393 (11) | 0.0562 (12) | 0.0629 (13) | 0.0041 (9) | 0.0071 (10) | 0.0035 (10) |
C1 | 0.0540 (15) | 0.0589 (15) | 0.0637 (16) | 0.0058 (13) | 0.0169 (13) | 0.0006 (12) |
C2 | 0.0704 (18) | 0.0594 (15) | 0.0664 (16) | 0.0034 (14) | 0.0132 (15) | 0.0056 (13) |
C3 | 0.0553 (16) | 0.0765 (18) | 0.0646 (16) | −0.0132 (15) | 0.0076 (13) | 0.0050 (14) |
C4 | 0.0398 (14) | 0.091 (2) | 0.090 (2) | −0.0036 (15) | 0.0118 (15) | 0.0011 (18) |
C5 | 0.0418 (14) | 0.0602 (15) | 0.0793 (18) | 0.0021 (12) | 0.0048 (13) | 0.0025 (13) |
C6 | 0.0410 (12) | 0.0461 (12) | 0.0514 (13) | −0.0033 (10) | 0.0015 (10) | −0.0093 (10) |
C7 | 0.0463 (14) | 0.0565 (14) | 0.0597 (15) | 0.0112 (12) | 0.0063 (12) | 0.0059 (12) |
C8 | 0.095 (2) | 0.082 (2) | 0.0727 (19) | −0.0204 (19) | 0.0134 (18) | −0.0077 (16) |
C9 | 0.106 (3) | 0.119 (3) | 0.095 (3) | −0.014 (2) | 0.009 (2) | −0.038 (2) |
C10 | 0.092 (3) | 0.178 (5) | 0.082 (2) | 0.019 (3) | 0.009 (2) | −0.049 (3) |
C11 | 0.132 (4) | 0.216 (6) | 0.059 (2) | −0.014 (4) | 0.018 (2) | 0.022 (3) |
C12 | 0.100 (3) | 0.141 (3) | 0.072 (2) | −0.027 (2) | 0.023 (2) | 0.021 (2) |
Geometric parameters (Å, °)
Cl1—C3 | 1.731 (4) | C10—C11 | 1.468 (8) |
S1—O1 | 1.431 (2) | C11—C12 | 1.531 (6) |
S1—O2 | 1.425 (2) | C1—H1 | 0.9300 |
S1—N1 | 1.594 (2) | C2—H2 | 0.9300 |
S1—C6 | 1.762 (3) | C4—H4 | 0.9300 |
N1—C7 | 1.475 (3) | C5—H5 | 0.9300 |
N1—H1N | 0.85 (4) | C7—H7 | 0.9800 |
C1—C2 | 1.366 (4) | C8—H8A | 0.9700 |
C1—C6 | 1.384 (4) | C8—H8B | 0.9700 |
C2—C3 | 1.370 (5) | C9—H9A | 0.9700 |
C3—C4 | 1.370 (4) | C9—H9B | 0.9700 |
C4—C5 | 1.374 (4) | C10—H10A | 0.9700 |
C5—C6 | 1.376 (3) | C10—H10B | 0.9700 |
C7—C12 | 1.510 (5) | C11—H11A | 0.9700 |
C7—C8 | 1.489 (4) | C11—H11B | 0.9700 |
C8—C9 | 1.517 (5) | C12—H12A | 0.9700 |
C9—C10 | 1.478 (6) | C12—H12B | 0.9700 |
O1—S1—O2 | 119.45 (12) | C5—C4—H4 | 120.00 |
O1—S1—N1 | 106.00 (12) | C4—C5—H5 | 120.00 |
O1—S1—C6 | 105.28 (12) | C6—C5—H5 | 120.00 |
O2—S1—N1 | 108.77 (12) | N1—C7—H7 | 108.00 |
O2—S1—C6 | 107.29 (11) | C8—C7—H7 | 108.00 |
N1—S1—C6 | 109.82 (11) | C12—C7—H7 | 108.00 |
S1—N1—C7 | 123.29 (16) | C7—C8—H8A | 109.00 |
S1—N1—H1N | 114 (3) | C7—C8—H8B | 109.00 |
C7—N1—H1N | 116 (3) | C9—C8—H8A | 109.00 |
C2—C1—C6 | 120.0 (2) | C9—C8—H8B | 109.00 |
C1—C2—C3 | 119.6 (3) | H8A—C8—H8B | 108.00 |
Cl1—C3—C2 | 119.2 (2) | C8—C9—H9A | 109.00 |
C2—C3—C4 | 121.1 (3) | C8—C9—H9B | 109.00 |
Cl1—C3—C4 | 119.7 (2) | C10—C9—H9A | 109.00 |
C3—C4—C5 | 119.5 (2) | C10—C9—H9B | 109.00 |
C4—C5—C6 | 119.9 (2) | H9A—C9—H9B | 108.00 |
S1—C6—C1 | 120.05 (17) | C9—C10—H10A | 109.00 |
S1—C6—C5 | 119.92 (19) | C9—C10—H10B | 109.00 |
C1—C6—C5 | 120.0 (2) | C11—C10—H10A | 109.00 |
N1—C7—C8 | 113.5 (2) | C11—C10—H10B | 109.00 |
C8—C7—C12 | 111.2 (3) | H10A—C10—H10B | 108.00 |
N1—C7—C12 | 107.7 (2) | C10—C11—H11A | 109.00 |
C7—C8—C9 | 112.1 (3) | C10—C11—H11B | 109.00 |
C8—C9—C10 | 111.9 (4) | C12—C11—H11A | 109.00 |
C9—C10—C11 | 112.3 (4) | C12—C11—H11B | 109.00 |
C10—C11—C12 | 113.0 (4) | H11A—C11—H11B | 108.00 |
C7—C12—C11 | 110.8 (4) | C7—C12—H12A | 110.00 |
C2—C1—H1 | 120.00 | C7—C12—H12B | 109.00 |
C6—C1—H1 | 120.00 | C11—C12—H12A | 109.00 |
C1—C2—H2 | 120.00 | C11—C12—H12B | 109.00 |
C3—C2—H2 | 120.00 | H12A—C12—H12B | 108.00 |
C3—C4—H4 | 120.00 | ||
O1—S1—N1—C7 | 168.78 (18) | C1—C2—C3—Cl1 | 178.7 (2) |
O2—S1—N1—C7 | 39.2 (2) | Cl1—C3—C4—C5 | −179.3 (2) |
C6—S1—N1—C7 | −78.0 (2) | C2—C3—C4—C5 | 0.6 (5) |
N1—S1—C6—C5 | 135.6 (2) | C3—C4—C5—C6 | 0.6 (4) |
O2—S1—C6—C1 | −165.3 (2) | C4—C5—C6—S1 | 176.1 (2) |
N1—S1—C6—C1 | −47.2 (2) | C4—C5—C6—C1 | −1.1 (4) |
O1—S1—C6—C1 | 66.5 (2) | N1—C7—C8—C9 | 176.1 (3) |
O2—S1—C6—C5 | 17.5 (2) | C12—C7—C8—C9 | 54.6 (4) |
O1—S1—C6—C5 | −110.7 (2) | N1—C7—C12—C11 | −178.0 (3) |
S1—N1—C7—C12 | −144.8 (2) | C8—C7—C12—C11 | −53.2 (4) |
S1—N1—C7—C8 | 91.8 (2) | C7—C8—C9—C10 | −54.4 (4) |
C6—C1—C2—C3 | 0.7 (4) | C8—C9—C10—C11 | 53.3 (5) |
C2—C1—C6—S1 | −176.7 (2) | C9—C10—C11—C12 | −53.2 (6) |
C2—C1—C6—C5 | 0.5 (4) | C10—C11—C12—C7 | 53.0 (5) |
C1—C2—C3—C4 | −1.3 (4) |
Hydrogen-bond geometry (Å, °)
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···O1i | 0.85 (4) | 2.05 (4) | 2.891 (4) | 170 (3) |
Symmetry codes: (i) −x+1, y+1/2, −z+1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HG5164).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812001870/hg5164sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812001870/hg5164Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812001870/hg5164Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report