Abstract
The eukaryotic oomycetes, or water molds, contain several species that are devastating pathogens of plants and animals. During infection, oomycetes translocate effector proteins into host cells, where they interfere with host-defense responses. For several oomycete effectors (i.e., the RxLR-effectors) it has been shown that their N-terminal polypeptides are important for the delivery into the host. Here we demonstrate that the putative RxLR-like effector, host-targeting protein 1 (SpHtp1), from the fish pathogen Saprolegnia parasitica translocates specifically inside host cells. We further demonstrate that cell-surface binding and uptake of this effector protein is mediated by an interaction with tyrosine-O-sulfate–modified cell-surface molecules and not via phospholipids, as has been reported for RxLR-effectors from plant pathogenic oomycetes. These results reveal an effector translocation route based on tyrosine-O-sulfate binding, which could be highly relevant for a wide range of host–microbe interactions.
Keywords: protein translocation, Phytophthora, Plasmodium
Several prokaryotic and eukaryotic microbial pathogens have evolved delivery mechanisms for pathogenicity effector proteins into host cells. Effectors modulate molecular processes in their hosts to suppress immune responses and thereby help to establish an infection (1–4). For example, pathogenic bacteria have developed a number of secretion systems that allow direct translocation of effector proteins into the cells under attack (5–7). Although bacterial translocation mechanisms are largely well characterized, little is known about how effectors from eukaryotic pathogens are delivered into host cells.
Recently, we found that SpHtp1, a putative effector from the fish pathogenic oomycete, Saprolegnia parasitica, is delivered by the pathogen into cells of a rainbow trout cell line (RTG-2) (8). SpHtp1 contains an Arg-His-Leu-Arg (RHLR) sequence at a position characteristic for the “RxLR motif” found in many putative effectors of plant-pathogenic oomycetes (8). Furthermore, we observed that this protein translocates into fish (RTG-2) cells in the absence of the pathogen, whereas a mutant protein lacking the amino acids 24–68, including the RHLR sequence, was unable to do so (8). However, SpHtp1 lacks the Y-W sequence element (9) that is a common of many structurally characterized oomycete RxLR-effectors (10, 11). Furthermore, with the availability of a large number of S. parasitica sequences (http://www.broadinstitute.org/), it has become apparent that there is no enrichment for a conserved RxLR-sequence within the secretome, as has been observed for Phytophthora spp. and the downy mildews (12, 13). Indeed, S. parasitica is phylogenetically distinct from the Peronosporales (14), in which RxLR-effectors occur abundantly (12, 15). Therefore, it is possible that SpHtp1 is not a conventional, or typical, RxLR-effector.
The most extensively studied group of oomycete effectors are the RxLR-effectors (16–20). Initially it was thought that the host translocation mechanism of these effectors shares similarities with the Plasmodium PEXEL translocation system (21–24). However, it has also been suggested by Kale et al. (19) that RxLR-effectors from plant pathogenic oomycetes are translocated in a pathogen-independent manner through binding to phosphorylated lipids, relying on an intact RxLR-motif that is part of a larger entity within the N-terminal leaders of the corresponding proteins. Yaeno et al. (10) tried to reproduce some of the RxLR-leader to lipid-binding observations made by Kale et al. (19), but were unsuccessful. In order for the PEXEL effectors of Plasmodium to translocate, it was found that the PEXEL-motif is specifically cleaved within the parasite and subsequently N-acetylated (25). Such PEXEL processing was shown to be important for delivery of these effectors into red blood cells via a specific translocon complex containing proteins from both the host and the parasite (25–28). At present it is unclear how oomycete RxLR effectors are translocated and opinions are divided (29).
Results and Discussion
To further investigate the mechanism underlying the translocation activity of SpHtp1 and to evaluate if this mechanism shares similarities to that described for RxLR-effectors found in plant pathogenic oomycetes, we fused the amino acids 24–68, representing a putative leader peptide, to mRFP, resulting in the reporter construct SpHtp124-68mRFP(His)6. Like the full-length protein (8), SpHtp124-68mRFP(His)6 was able to enter trout cells (Fig. 1A). In contrast, mRFP(His)6 alone was not detected in trout cells using identical conditions (Fig. 2 A and K, column 1). Recently, it has been reported that several plant pathogenic oomycete RxLR-effectors enter eukaryotic cells of different origins (i.e., human and plant) in the absence of the pathogen (19). Therefore, we tested if SpHtp124-68mRFP(His)6 is able to enter human cells (HEK293 cell line) and onion epidermal cells. However, no translocation of this protein was observed into HEK293 or onion epidermal cells (Fig. 1 B and C; see SI Appendix, Note 1 for further details), indicating that the translocation of this protein is host cell-specific. Both cell types were not impaired in their trafficking and endocytosis abilities (SI Appendix, Fig. S2).
To investigate whether the observed translocation activity of SpHtp124-68mRFP(His)6 is dependent on a molecule present on the cell surface or based on an intrinsic physical property of this polypeptide, the concentration-dependent uptake into RTG-2 cells after 1 h was analyzed using flow cytometry (Fig. 1 D and E). Plotting mean fluorescence intensity (MFI) values against the respective protein concentration yielded a sigmoid shaped distribution indicative of a saturable entry system, possibly a receptor. The presence of the lag phase rules out a solely diffusion-driven process. The EC50 value for the SpHtp124-68mRFP(His)6 uptake was calculated to be 1.23 μM. Furthermore, Western blot analysis was used to estimate the absolute amount of SpHtp124-68mRFP(His)6 that can be translocated inside the RTG-2 cells after 1-h incubation (Fig. 1F). The results show that SpHtp124-68mRFP(His)6 is not degraded inside the cells and the densitometric analysis of the band detected at 33 kDa led to a value of ∼0.4 pmol that was loaded onto the gel. Using the average volume of a trypsinated RTG-2 cell of 1,770 μm3 (determined by measuring cell diameters and assuming a perfect spherical shape), an average of ∼2.7 × 1013 molecules of SpHtp124-68mRFP(His)6 per cell were found under the given conditions. Therefore, when assuming an average surface accessibility of the cells to the protein solution of 100%, and only a limitation by diffusion, the minimal concentration for the SpHtp124-68mRFP(His)6 corresponding receptor present at any time on the cell surface can be estimated at ∼12 fmol per cell/s.
Recently it was reported that the translocation of some plant pathogenic oomycete and fungal effectors is dependent on RxLR and RxLR-like motifs and their ability to interact with inositol-phosphate derivatives. It has been reported that the phospholipid head-groups inositol-1,3-bisphosphate (I1,3P2) and inositol-1,4-bisphosphate (I1,4P2) are efficient inhibitors of the RxLR-mediated translocation process, exhibiting nano-molar binding constants to the reported polypeptides (19). The translocation activity of the SpHtp1-leader was also dependent on the KRHLR amino acids, because a full-length mRFP fusion protein, SpHtp124-198mRFP(His)6 GGHLG, in which the KRHLR amino acids were mutated to GGHLG did not enter RTG-2 cells (compare Fig. 2 B and C, and K, columns 2 and 3). However, even though the translocation activity is embedded within the protein N terminus and mutation of the KR(HL)R amino acids disabled translocation, the SpHtp1 N-terminal polypeptide did not show any affinity to phospholipids when tested on lipid spot membranes (SI Appendix, Fig. S3A). Similar observations were recently published for the RxLR-effectors AVR3a from Phytophthora infestans, AVR1b from Phytophthora sojae, and AVR1b and AVR3a4 from Phytophthora capsici (10). The authors showed that the RxLR-leaders of these proteins do not bind phospholipids (10), and this directly challenges the mechanism of RxLR-mediated translocation proposed by Kale et al. (19). Furthermore, the SpHtp1 protein construct lacking the N-terminal polypeptide, SpHtp169-198(His)6, did not show any detectable phospholipid binding activity. The full-length protein construct SpHtp124-198(His)6, lacking only the signal peptide did show an interaction on lipid-spot membranes. However, no physical interaction with the I1,3P2 and I1,4P2 head-groups could be detected by isothermal titration calorimetry (ITC) (SI Appendix, Fig. S3B). To investigate if, for example, I1,4P2 might indirectly affect the translocation of SpHtp124-68mRFP(His)6, confocal microscopy and FACS studies were performed. With both approaches no inhibitory effect of I1,4P2 could be detected, even at concentrations exceeding fourfold the amount reported to be sufficient for RxLR-effectors of plant pathogenic oomycetes (Fig. 2 D and K, column 4) (19).
To investigate the mechanism of uptake of SpHtp1, we considered other potential cell-surface chemical modifications. Among them is tyrosine-O-sulfate, a common aryl sulfate modification presented on cell surfaces (30). This modification originates from the attachment of a sulfate group to the tyrosine side chains of proteins during their transit through the Golgi, and can be found in numerous cell-surface proteins. Furthermore, tyrosine sulphation has been shown to be essential for protein–protein associations in diverse pathogen–host interactions (31, 32). For example, the sulphation of four tyrosines in the T-cell HIV-coreceptor CCR5 is necessary for efficient binding of HIV (30). Moreover, the sulphation of two tyrosines in the RBC Duffy protein, the receptor for Plasmodium vivax, is crucial for merozoite invasion (33). Remarkably, translocation of SpHtp124-68mRFP(His)6 was found to be dependent on sulfated modifications present at the RTG-2 cell surfaces, because inhibition of sulfotransferases in the fish cells by NaClO3 (30) reduced the uptake by ∼30-fold (Fig. 2 E and K, column 5). In addition, the enzymatic removal of extracellular sulfate groups from aromatic residues with a type VI sulfatase (34) reduced the translocation of SpHtp124-68mRFP(His)6 by 80% (Fig. 2 F and K, column 6). To show that the RTG-2 cells were not impaired by the NaClO3 or sulfatase treatment, control experiments using the Alexa Fluor 488-labeled lectin wheat germ agglutinin (WGA) were performed (35). Coincubation of SpHtp124-68mRFP(His)6 with WGA on RTG-2 cells lead to overlapping fluorescence signals of both labels (mRFP and Alexa Fluor 488) in vesicular structures close to the nuclei of the cells (SI Appendix, Fig. S4A). Although pretreatment of the RTG-2 cells with either NaClO3 or aryl-sulfatase strongly reduced the uptake of SpHtp124-68mRFP(His)6, in the coincubation experiments the uptake of WGA remained unaffected (SI Appendix, Fig. S4 B–F). In addition, the ability of an antibody that specifically binds tyrosine-O-sulfate to block the SpHtp124-68mRFP(His)6 uptake was tested, and compared with an antibody specific for the very similar tyrosine-phosphate moiety. The RTG-2 cells were preincubated with 10 μg/mL of the respective antibodies at room temperature for 1 h before exposure to 3 μM SpHtp124-68mRFP(His)6. Under these conditions, the antityrosine-phosphate antibody reduced the translocation by ∼20% (Fig. 2 G and K, column 7), and the antityrosine-sulfate specific antibody blocked the uptake by ∼50% (Fig. 2 H and K, column 8). Complementary experiments using the corresponding modified amino acids, H-Tyr(PO3)-OH and H-Tyr(SO3)-OH at a concentration of 5 mM to compete for SpHtp124-68mRFP(His)6 binding to the cells showed that the presence of H-Tyr(PO3)-OH reduced the uptake by ∼20% (Fig. 2 I and K, column), whereas H-Tyr(SO3)-OH under the same conditions blocked the translocation by ∼90% (Fig. 2 J and K, column 10). The discrepancy of the inhibitory effect of the “bulky” tyrosine-sulfate specific antibody and H-Tyr(SO3)-OH probably arises from the fact that, as a large number of different proteins on the cell surface are tyrosine-O-sulfate–modified (36), the antibody will not only bind to the SpHtp1 receptor but also to all other accessible epitopes.
ITC experiments were used to investigate the potential and affinity of the SpHtp1 to interact with the tyrosine-O-sulfate moiety. SpHtp124-68mRFP(His)6 showed an exothermal interaction with an estimated binding constant of 400–500 μM toward H-Tyr(SO3)-OH (Fig. 3A, green trace). In control experiments using tyrosine phosphate, no binding of this compound to SpHtp124-68mRFP(His)6 could be detected under identical conditions (SI Appendix, Fig. S3B). Interestingly, we found that a modification of H-Tyr(SO3)-OH with the hydrophobic fluorenylmethyloxycarbonyl (FMOC) group increased the affinity of this compound toward SpHtp124-68mRFP(His)6 ∼fivefold. For both the full-length construct, SpHtp124-198(His)6 and the N-terminal leader mRFP fusion construct, SpHtp124-68mRFP(His)6, very similar binding constants (and thermodynamic parameters) were obtained with this compound of 144 ± 21.9 μM and 116 ± 16.9 μM, respectively (Fig. 3 A and B). This finding suggests that the protein surface in the SpHtp1 N-terminal polypeptide that is responsible for tyrosine sulfate binding is flanked at least on one side by a hydrophobic surface. Indeed, Fmoc-Tyr(SO3)-OH was also found to be a better inhibitor of the SpHtp124-68mRFP(His)6 translocation into RTG-2 cells than H-Tyr(SO3)-OH (SI Appendix, Fig. S5). Importantly, the replaced mutant protein construct SpHtp124-198mRFP(His)6GGHLG did not show any interaction to Fmoc-Tyr(SO3)-OH, demonstrating that the tyrosine-O-sulfate binding properties reside in the N-terminal polypeptide of SpHtp1 (Fig. 3A, blue trace).
In summary, the N-terminal leader of SpHtp1 is a peptide from S. parasitica that shows host cell-specific translocation. This translocation is independent of phosphoinositol-phosphate, and is instead reliant on sulfate-modified cell-surface molecules. Moreover, our data strongly suggest that the SpHtp1 receptor molecules are tyrosine-O-sulfate modified proteins. Therefore, the translocation of SpHtp1 is clearly different from the process reported for RxLR effectors of plant pathogenic oomycetes (19), which have been reported to bind to phospholipids, and is also distinct from the malaria PEXEL protein translocation process (25–28), because SpHtp1 does not require any pathogen encoded proteins to enter host cells. Tyrosine-O-sulfate–dependent translocation represents a previously undescribed means of effector delivery by oomycetes that may apply to other host-microbe/pest interactions.
Materials and Methods
Detailed descriptions of all methods are given in the SI Appendix.
Live Cell Imaging.
The cells were incubated with the various recombinant protein constructs in the respective cell type-specific media containing 10% fetal calf sera (FCS). Before imaging, the cells were extensively washed. Microscopy was carried out on a Zeiss LMS 510 confocal microscope, applying identical settings for all samples.
Isothermal Titration Calorimetry.
Titration experiments were performed with a MicroCal ITC200 at 20 °C. Titrant stock solutions were always prepared with the same batch of buffer as used for dialysis. Because the initial injection generally delivers inaccurate data, the first step was omitted from the analysis. The collected data were analyzed using the program “Origin” (MicroCal) using the binding models provided by the supplier. Errors correspond to the SD of the nonlinear least-squares fit of the datapoints of the titration curve.
Phospholipid Binding.
The lipid spot membranes were equilibrated for 10 min with PBS containing 0.1% Tween 20 and 5% lipid free BSA before adding the respective protein constructs. Protein incubations were carried out for 20 min at room temperature. Subsequently, the membranes were extensively washed with PBS/Tween/BSA. Antibody detection was performed with a HRP-coupled anti–His-antibody in (PBS)/Tween/BSA at a titer of 1:10,000 using ECL.
FACS.
Equalized cell suspensions were grown to confluent layers. For sulfotransferase inhibition, NaClO3 was added at a final concentration of 70 mM to the medium. After 2 d of growth, the cells were washed and subsequently incubated with the respective protein for 1 h. Subsequently, the cells were dislodged with 1 mL of a trypsin solution and counted. On average a cell concentration of ∼2 × 106 cells/mL was obtained. FACS measurements were performed on an LSR II flow cytometer. From 10,000 counted events, a homogenous population of cells was selected and further analyzed for mRFP fluorescence. Data analysis was carried out using FlowJo v 7.6.
Sample Preparation for Western Blotting.
Samples were prepared as described for the FACS analysis. After trypsination the cells were harvested by centrifugation and resuspended 2× in PBS to remove the excess of trypsin. The wet cell pellets containing ∼2 × 106 cells (∼20 μL) were lysed at 95 °C in 100 μL of Laemmli sample buffer containing 8 M urea, 2% β-mercaptoethanol, and 1 mM PMSF. The sample volume loaded on the gel was 15 μL.
Supplementary Material
Acknowledgments
We thank Kevin MacKenzie and Alastair D. McKinnon of the core microscopy facility of the University of Aberdeen; Sharon Kelly for the usage of the CD-spectrometer; Prof. Ian Booth for the use of the iTC200; and Prof. Neil A. R. Gow for helpful suggestions and discussions. This work is supported by the Biotechnology and Biological Sciences Research Council (S.W., P.R.J.B., I.d.B., K.L.M., C.J.S., and P.v.W.), the Natural Environment Research Council (P.v.W.), the University of Aberdeen (S.G., K.L.M., A.J.P., C.J.S., and P.v.W.), the University of Dundee (P.R.J.B.), Rural and Environment Research and Analysis Directorate (S.C.W.), Deutsche Forschungsgemeinschaft TRR 60/1 (to P.B.), Bundesministerium für Bildung und Forschung (A.M. and P.B.), and The Royal Society (P.v.W.). A.J.P. is a co-principal investigator on one grant that funded the research.
Footnotes
The authors declare no conflict of interest.
This article is a PNAS Direct Submission.
This article contains supporting information online at www.pnas.org/lookup/suppl/doi:10.1073/pnas.1113775109/-/DCSupplemental.
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