Abstract
The RNA binding sites of the protein complex of L7/12 dimers and L10, and of protein L11, occur within the 5'-one third of 23S RNA. Binding of the L7/12-L10 protein complex to the 23S RNA is stimulated by protein L11 and vice-versa. This is the second example to be established of mutual stimulation of RNA binding by two ribosomal proteins or protein complexes, and suggests that this may be an important principle governing ribosomal protein-RNA assembly. When the L7/12-L10 complex is bound to the RNA, L10 becomes strongly resistant to trypsin. Since the L7/12 dimer does not bind specifically to the 23S RNA, this suggests that L10 constitutes a major RNA binding site of the protein complex. Only one of the L7/12 dimers is bound strongly in the (L7/12-L10)-23S RNA complex; the other can dissociate with no concurrent loss of L10.
Full text
PDFImages in this article
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Brimacombe R., Stöffler G., Wittmann H. G. Ribosome structure. Annu Rev Biochem. 1978;47:217–249. doi: 10.1146/annurev.bi.47.070178.001245. [DOI] [PubMed] [Google Scholar]
- Clegg C., Hayes D. Identification of neighbouring proteins in the ribosomes of Escherichia coli. A topographical study with the cross-linking reagent dimethyl suberimidate. Eur J Biochem. 1974 Feb 15;42(1):21–28. doi: 10.1111/j.1432-1033.1974.tb03309.x. [DOI] [PubMed] [Google Scholar]
- Dijk J., Littlechild J., Garrett R. A. The RNA binding properties of "native" protein-protein complexes isolated from the Escherichia coli ribosome. FEBS Lett. 1977 May 15;77(2):295–300. doi: 10.1016/0014-5793(77)80255-x. [DOI] [PubMed] [Google Scholar]
- Dijk J., Littlechild J. Purification of ribosomal proteins from Escherichia coli under nondenaturing conditions. Methods Enzymol. 1979;59:481–502. doi: 10.1016/0076-6879(79)59109-5. [DOI] [PubMed] [Google Scholar]
- Donner D., Villems R., Liljas A., Kurland C. G. Guanosinetriphosphatase activity dependent on elongation factor Tu and ribosomal protein L7/L12. Proc Natl Acad Sci U S A. 1978 Jul;75(7):3192–3195. doi: 10.1073/pnas.75.7.3192. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Fuenteun J., Monier R., Garrett R., Le Bret M., Le Pecq J. B. Effect of 50 S subunit proteins L5, L18 and L25 on the fluorescence of 5 S RNA-bound ethidium bromide. J Mol Biol. 1975 Apr 25;93(4):535–541. doi: 10.1016/0022-2836(75)90245-4. [DOI] [PubMed] [Google Scholar]
- Jaenicke L. A rapid micromethod for the determination of nitrogen and phosphate in biological material. Anal Biochem. 1974 Oct;61(2):623–627. doi: 10.1016/0003-2697(74)90429-1. [DOI] [PubMed] [Google Scholar]
- Kaltschmidt E., Wittmann H. G. Ribosomal proteins. VII. Two-dimensional polyacrylamide gel electrophoresis for fingerprinting of ribosomal proteins. Anal Biochem. 1970 Aug;36(2):401–412. doi: 10.1016/0003-2697(70)90376-3. [DOI] [PubMed] [Google Scholar]
- Kühlbrandt W., Garrett R. A. A ribonucleoprotein core in the 50 S ribosomal subunit of Escherichia coli. FEBS Lett. 1978 Oct 15;94(2):207–212. doi: 10.1016/0014-5793(78)80939-9. [DOI] [PubMed] [Google Scholar]
- Laemmli U. K., Favre M. Maturation of the head of bacteriophage T4. I. DNA packaging events. J Mol Biol. 1973 Nov 15;80(4):575–599. doi: 10.1016/0022-2836(73)90198-8. [DOI] [PubMed] [Google Scholar]
- Littlechild J., Dijk J., Garrett R. A. The identification of new RNA-binding proteins in the Escherichia coli ribosome. FEBS Lett. 1977 Mar 1;74(2):292–294. doi: 10.1016/0014-5793(77)80867-3. [DOI] [PubMed] [Google Scholar]
- Maassen J. A., Möller W. Elongation factor G-dependent binding of a photoreactive GTP analogue to Escherichia coli ribosomes results in labeling of protein L11. J Biol Chem. 1978 Apr 25;253(8):2777–2783. [PubMed] [Google Scholar]
- Maassen J. A., Möller W. Identification by photo-affinity labeling of the proteins in Escherichia coli ribosomes involved in elongation factor G-dependent GDP binding. Proc Natl Acad Sci U S A. 1974 Apr;71(4):1277–1280. doi: 10.1073/pnas.71.4.1277. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Morrison C. A., Tischendorf G., Stöffler G., Garrett R. A. Accessibility of proteins in 50S ribosomal subunits of Escherichia coli to antibodies: an ultracentrifugation study. Mol Gen Genet. 1977 Mar 16;151(3):245–252. doi: 10.1007/BF00268787. [DOI] [PubMed] [Google Scholar]
- Osterberg R., Sjöberg B., Pettersson I., Liljas A., Kurland C. G. Small-angle x-ray scattering study of the protein complex of L7/L12 and L10 from Escherichia coli ribosomes. FEBS Lett. 1977 Jan 15;73(1):22–24. doi: 10.1016/0014-5793(77)80006-9. [DOI] [PubMed] [Google Scholar]
- Pettersson I., Hardy S. J., Liljas A. The ribosomal protein L8 is a complex L7/L12 and L10. FEBS Lett. 1976 Apr 15;64(1):135–138. doi: 10.1016/0014-5793(76)80267-0. [DOI] [PubMed] [Google Scholar]
- Spierer P., Zimmermann R. A. Stoichiometry, cooperativity, and stability of interactions between 5S RNA and proteins L5, L18, and L25 from the 50S ribosomal subunit of Escherichia coli. Biochemistry. 1978 Jun 27;17(13):2474–2479. doi: 10.1021/bi00606a002. [DOI] [PubMed] [Google Scholar]
- Spillmann S., Dohme F., Nierhaus K. H. Assembly in vitro of the 50 S subunit from Escherichia coli ribosomes: proteins essential for the first heat-dependent conformational change. J Mol Biol. 1977 Sep 25;115(3):513–523. doi: 10.1016/0022-2836(77)90168-1. [DOI] [PubMed] [Google Scholar]
- Strycharz W. A., Nomura M., Lake J. A. Ribosomal proteins L7/L12 localized at a single region of the large subunit by immune electron microscopy. J Mol Biol. 1978 Dec 5;126(2):123–140. doi: 10.1016/0022-2836(78)90355-8. [DOI] [PubMed] [Google Scholar]
- Tischendorf G. W., Zeichhardt H., Stöffler G. Architecture of the Escherichia coli ribosome as determined by immune electron microscopy. Proc Natl Acad Sci U S A. 1975 Dec;72(12):4820–4824. doi: 10.1073/pnas.72.12.4820. [DOI] [PMC free article] [PubMed] [Google Scholar]