Table 1.
The difference of high-redundancy genes expression between cDNA libraries from C. cupreum.
| Contig no. | Annotation | C1 | C2 | ||
|---|---|---|---|---|---|
| ESTs | % | ESTs | % | ||
| Contig525 | Glyceraldehyde-3-phosphate dehydrogenase | 109 | 7.41 | 14 | 1.69 |
| Contig531 | Coproporphyrinogen oxidase | 72 | 4.89 | 5 | 0.6 |
| Contig30 | Predicted protein | 56 | 3.81 | 0 | 0 |
| Contig433 | C-4 sterol methyl oxidase | 54 | 3.67 | 0 | 0 |
| Contig313 | Predicted protein | 36 | 2.45 | 0 | 0 |
| Contig2 | Pyruvate decarboxylase | 27 | 1.84 | 0 | 0 |
| Contig39 | Predicted protein | 23 | 1.56 | 0 | 0 |
| Contig507 | Xylulose-5-phosphate phosphoketolase | 21 | 1.43 | 3 | 0.36 |
| Contig 152 | Predicted protein | 20 | 1.36 | 16 | 1.93 |
| Contig523 | EF1-alpha translation elongation factor | 19 | 1.29 | 12 | 1.45 |
| Contig42 | Thiazole biosynthetic enzyme | 19 | 1.29 | 2 | 0.24 |
| Contig520 | Actin | 17 | 1.16 | 4 | 0.48 |
| Contig495 | Glutamine synthetase | 17 | 1.16 | 1 | 0.12 |
| Contig517 | Aspartic protease | 16 | 1.09 | 3 | 0.36 |
| Contig317 | Ammonium transporter | 16 | 1.09 | 0 | 0 |
| Contig419 | ATP synthase protein | 16 | 1.09 | 0 | 0 |
| Contig4 | Alcohol dehydrogenase | 15 | 1.02 | 4 | 0.48 |
| Contig474 | β-1,3-exoglucanase | 14 | 0.95 | 2 | 0.24 |
| Contig494 | ATP citrate lyase | 14 | 0.95 | 1 | 0.12 |
| Contig412 | Histone H2B | 13 | 0.88 | 0 | 0 |
| Contig298 | Pyruvate kinase | 13 | 0.88 | 0 | 0 |
| Contig310 | Aspartate aminotransferase | 11 | 0.75 | 1 | 0.12 |
| Contig408 | Heat shock protein 30 | 11 | 0.75 | 0 | 0 |
| Contig489 | ADP-ATP translocase | 11 | 0.75 | 8 | 0.97 |
| Contig165 | MFS monosaccharide transporter | 0 | 0 | 20 | 2.42 |
| Contig162 | Phosphoenolpyruvate carboxykinase | 0 | 0 | 12 | 1.45 |
Relative values (%): ESTs numbers/all ESTs numbers in C1 or C2 library.