Abstract
In title compound, C16H9ClO4, the coumarin ring system is approximately planar [maximum deviation = 0.056 (1) Å] and is oriented with respect to the benzene ring at an angle of 22.60 (7)°. Intermolecular C—H⋯O hydrogen bonding is present in the crystal.
Related literature
For the biochemical properties of related compounds, see: Kontogiorgis & Hadjipavlou-Litina (2005 ▶); Finn et al. (2002 ▶); Gursoy & Karali (2003 ▶); Borges et al. (2005 ▶). For the synthesis, see: Zhou et al. (2008 ▶).
Experimental
Crystal data
C16H9ClO4
M r = 300.68
Monoclinic,
a = 15.7586 (6) Å
b = 7.0694 (2) Å
c = 12.7167 (6) Å
β = 113.037 (5)°
V = 1303.70 (9) Å3
Z = 4
Mo Kα radiation
μ = 0.31 mm−1
T = 135 K
0.35 × 0.30 × 0.25 mm
Data collection
Agilent Xcalibur Eos diffractometer
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011 ▶) T min = 0.99, T max = 1.00
5907 measured reflections
2662 independent reflections
2059 reflections with I > 2σ(I)
R int = 0.025
Refinement
R[F 2 > 2σ(F 2)] = 0.040
wR(F 2) = 0.092
S = 1.04
2662 reflections
190 parameters
H-atom parameters constrained
Δρmax = 0.22 e Å−3
Δρmin = −0.25 e Å−3
Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: OLEX2 (Dolomanov et al., 2009 ▶); software used to prepare material for publication: OLEX2.
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812003376/xu5453sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812003376/xu5453Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812003376/xu5453Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C3—H3⋯O2i | 0.95 | 2.34 | 3.061 (2) | 133 |
Symmetry code: (i)
.
Acknowledgments
This work was supported by the Applied Basic Research Program of Sichuan Provincial Science and Technology Department, China (grant No. 2009JY0113). The authors thank Mr Z.–H. Mao and Mr D.–B. Luo of the Analytical and Testing Center, Sichuan University, for assistance with the data collection.
supplementary crystallographic information
Comment
The coumarins and derivatives have demonstrated an ever-increasing variety of uses, including platelet anti-aggregating activity, anti-inflammatory activity (Kontogiorgis & Hadjipavlou-Litina, 2005), anti-tumor activity (Finn et al., 2002), anti-bacterials (Gursoy & Karali, 2003), and antiviral effect (Borges et al., 2005). So the title compound was synthesized according to the published method (Zhou et al., 2008). We report here the crystal structure of the title compound. In the title compound (Fig. 1), the dihedral angle between the planes of coumarin and benzene ring is 22.60 (7)°. The packing view of the title compound is shown in Fig. 2, weak intermolecular C—H···O hydrogen bonding is present in the crystal (Table 1).
Experimental
2-Oxo-2H-chromene-3-carboxylic acid (0.02 mol) was added to 10 ml sulfurous oxychloride. The mixture was refluxed for 3 h, and then the resultant was removed with simple distillation to give 2-oxo-2H-chromene-3-carbonyl chloride (3.95 g). The compound can be used directly without purification. The solution of 4-chlorophenol (0.0165 mol) dissolved in dried methyl dichloride (15 ml) was added dropwise to a solution of 2-oxo-2H-chromene-3-acyl chloride (0.015 mol) dissolved in methyl dichloride (20 ml) and triethylamine (2.5 ml) at room temperature. The reaction mixture was refluxed for 6 h, (mornitored by TLC). The mixture was then neutralized with 5% HCl and washed with saturated NaHCO3 and brine respectively. The organic phase was dried over Na2SO4 and evaporated under the reduced pressure. The resulting residue was purified by column chromatography (ethyl acetate: petroleum ether) to give the pure compound. Single crystals suitable for X-ray analysis were obtained by slow evaporation of a mixed solvent (methyl dichloride: methanol) at room temperature.
Refinement
All H atoms were placed in calculated positions and refined in the riding model approximation, with C—H = 0.95 Å. The hydrogen atoms were refined in the riding model with Uiso(H) = 1.2Ueq(C).
Figures
Fig. 1.
The molecular structure of the title compound with the atom numbering, showing displacement ellipsoids at the 30% probability level.
Fig. 2.
A packing diagram of the title compound.
Crystal data
| C16H9ClO4 | F(000) = 616 |
| Mr = 300.68 | Dx = 1.532 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.7107 Å |
| a = 15.7586 (6) Å | Cell parameters from 1865 reflections |
| b = 7.0694 (2) Å | θ = 3.2–29.0° |
| c = 12.7167 (6) Å | µ = 0.31 mm−1 |
| β = 113.037 (5)° | T = 135 K |
| V = 1303.70 (9) Å3 | Block, colorless |
| Z = 4 | 0.35 × 0.30 × 0.25 mm |
Data collection
| Agilent Xcalibur Eos diffractometer | 2662 independent reflections |
| Radiation source: Enhance (Mo) X-ray Source | 2059 reflections with I > 2σ(I) |
| Graphite monochromator | Rint = 0.025 |
| Detector resolution: 16.0874 pixels mm-1 | θmax = 26.4°, θmin = 3.2° |
| ω scans | h = −19→13 |
| Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011) | k = −8→8 |
| Tmin = 0.99, Tmax = 1.00 | l = −15→15 |
| 5907 measured reflections |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.092 | H-atom parameters constrained |
| S = 1.04 | w = 1/[σ2(Fo2) + (0.0338P)2 + 0.3053P] where P = (Fo2 + 2Fc2)/3 |
| 2662 reflections | (Δ/σ)max < 0.001 |
| 190 parameters | Δρmax = 0.22 e Å−3 |
| 0 restraints | Δρmin = −0.25 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Cl1 | 0.43760 (4) | 0.34411 (8) | 0.78566 (6) | 0.04706 (19) | |
| O1 | 0.06760 (8) | 0.42742 (17) | 0.78729 (10) | 0.0207 (3) | |
| O2 | 0.08852 (9) | 0.22946 (18) | 0.93513 (11) | 0.0261 (3) | |
| O3 | −0.19477 (9) | 0.33623 (17) | 0.87422 (11) | 0.0257 (3) | |
| O4 | −0.05715 (9) | 0.31077 (18) | 1.01368 (11) | 0.0282 (3) | |
| C1 | 0.32829 (13) | 0.3605 (3) | 0.78930 (18) | 0.0278 (5) | |
| C2 | 0.25165 (13) | 0.3316 (3) | 0.69014 (17) | 0.0268 (4) | |
| H2 | 0.2583 | 0.2995 | 0.6212 | 0.032* | |
| C3 | 0.16458 (13) | 0.3502 (2) | 0.69216 (16) | 0.0224 (4) | |
| H3 | 0.1108 | 0.3305 | 0.6249 | 0.027* | |
| C4 | 0.15761 (12) | 0.3978 (2) | 0.79363 (15) | 0.0198 (4) | |
| C5 | 0.23437 (13) | 0.4279 (3) | 0.89344 (15) | 0.0233 (4) | |
| H5 | 0.2278 | 0.4620 | 0.9621 | 0.028* | |
| C6 | 0.32111 (13) | 0.4072 (3) | 0.89098 (17) | 0.0281 (4) | |
| H6 | 0.3750 | 0.4249 | 0.9585 | 0.034* | |
| C7 | 0.03900 (13) | 0.3290 (2) | 0.85939 (15) | 0.0194 (4) | |
| C8 | −0.06155 (12) | 0.3544 (2) | 0.82490 (15) | 0.0189 (4) | |
| C9 | −0.09937 (13) | 0.3309 (2) | 0.91268 (16) | 0.0216 (4) | |
| C10 | −0.25169 (13) | 0.3560 (2) | 0.76084 (16) | 0.0235 (4) | |
| C11 | −0.21523 (13) | 0.3850 (2) | 0.67830 (16) | 0.0218 (4) | |
| C12 | −0.11740 (13) | 0.3840 (2) | 0.71464 (15) | 0.0199 (4) | |
| H12 | −0.0910 | 0.4045 | 0.6600 | 0.024* | |
| C13 | −0.27666 (14) | 0.4046 (3) | 0.56409 (17) | 0.0276 (4) | |
| H13 | −0.2535 | 0.4265 | 0.5065 | 0.033* | |
| C14 | −0.37008 (14) | 0.3924 (3) | 0.53509 (18) | 0.0338 (5) | |
| H14 | −0.4114 | 0.4052 | 0.4575 | 0.041* | |
| C15 | −0.40409 (14) | 0.3612 (3) | 0.6193 (2) | 0.0352 (5) | |
| H15 | −0.4688 | 0.3515 | 0.5985 | 0.042* | |
| C16 | −0.34558 (14) | 0.3440 (3) | 0.73263 (19) | 0.0305 (5) | |
| H16 | −0.3692 | 0.3243 | 0.7900 | 0.037* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Cl1 | 0.0280 (3) | 0.0510 (4) | 0.0715 (4) | 0.0092 (3) | 0.0296 (3) | 0.0160 (3) |
| O1 | 0.0195 (7) | 0.0249 (7) | 0.0200 (7) | 0.0019 (6) | 0.0102 (5) | 0.0047 (5) |
| O2 | 0.0250 (7) | 0.0309 (7) | 0.0226 (7) | 0.0051 (6) | 0.0096 (6) | 0.0066 (6) |
| O3 | 0.0240 (7) | 0.0298 (7) | 0.0276 (7) | −0.0018 (6) | 0.0147 (6) | −0.0031 (6) |
| O4 | 0.0325 (8) | 0.0361 (8) | 0.0192 (7) | −0.0040 (7) | 0.0134 (6) | −0.0015 (6) |
| C1 | 0.0216 (10) | 0.0223 (10) | 0.0436 (12) | 0.0038 (8) | 0.0173 (9) | 0.0083 (9) |
| C2 | 0.0328 (11) | 0.0231 (10) | 0.0310 (11) | 0.0017 (9) | 0.0196 (9) | 0.0028 (8) |
| C3 | 0.0259 (10) | 0.0196 (9) | 0.0216 (10) | −0.0023 (8) | 0.0093 (8) | 0.0005 (7) |
| C4 | 0.0201 (9) | 0.0168 (8) | 0.0244 (10) | 0.0017 (8) | 0.0107 (8) | 0.0038 (7) |
| C5 | 0.0257 (10) | 0.0230 (10) | 0.0208 (10) | −0.0012 (8) | 0.0086 (8) | 0.0015 (7) |
| C6 | 0.0210 (10) | 0.0264 (10) | 0.0318 (11) | −0.0004 (9) | 0.0049 (9) | 0.0061 (8) |
| C7 | 0.0256 (10) | 0.0195 (9) | 0.0149 (9) | −0.0018 (8) | 0.0099 (8) | −0.0030 (7) |
| C8 | 0.0222 (9) | 0.0155 (9) | 0.0222 (9) | −0.0010 (8) | 0.0122 (8) | −0.0020 (7) |
| C9 | 0.0241 (10) | 0.0180 (9) | 0.0265 (11) | −0.0027 (8) | 0.0140 (8) | −0.0034 (8) |
| C10 | 0.0228 (10) | 0.0181 (9) | 0.0297 (11) | −0.0006 (8) | 0.0105 (8) | −0.0037 (8) |
| C11 | 0.0223 (10) | 0.0167 (9) | 0.0267 (10) | 0.0012 (8) | 0.0098 (8) | −0.0018 (7) |
| C12 | 0.0253 (10) | 0.0156 (8) | 0.0216 (9) | −0.0006 (8) | 0.0123 (8) | −0.0017 (7) |
| C13 | 0.0285 (11) | 0.0224 (10) | 0.0292 (11) | 0.0039 (9) | 0.0083 (9) | 0.0004 (8) |
| C14 | 0.0257 (11) | 0.0289 (11) | 0.0376 (12) | 0.0066 (9) | 0.0025 (9) | 0.0002 (9) |
| C15 | 0.0192 (10) | 0.0266 (11) | 0.0554 (14) | 0.0038 (9) | 0.0098 (10) | −0.0021 (10) |
| C16 | 0.0249 (11) | 0.0255 (10) | 0.0450 (13) | 0.0011 (9) | 0.0178 (10) | −0.0019 (9) |
Geometric parameters (Å, º)
| Cl1—C1 | 1.7450 (19) | C6—H6 | 0.9500 |
| O1—C4 | 1.404 (2) | C7—C8 | 1.480 (2) |
| O1—C7 | 1.361 (2) | C8—C9 | 1.466 (2) |
| O2—C7 | 1.201 (2) | C8—C12 | 1.349 (2) |
| O3—C9 | 1.388 (2) | C10—C11 | 1.395 (3) |
| O3—C10 | 1.375 (2) | C10—C16 | 1.382 (3) |
| O4—C9 | 1.202 (2) | C11—C12 | 1.426 (3) |
| C1—C2 | 1.378 (3) | C11—C13 | 1.402 (3) |
| C1—C6 | 1.381 (3) | C12—H12 | 0.9500 |
| C2—H2 | 0.9500 | C13—H13 | 0.9500 |
| C2—C3 | 1.388 (3) | C13—C14 | 1.373 (3) |
| C3—H3 | 0.9500 | C14—H14 | 0.9500 |
| C3—C4 | 1.379 (2) | C14—C15 | 1.390 (3) |
| C4—C5 | 1.385 (2) | C15—H15 | 0.9500 |
| C5—H5 | 0.9500 | C15—C16 | 1.379 (3) |
| C5—C6 | 1.387 (3) | C16—H16 | 0.9500 |
| C7—O1—C4 | 118.58 (13) | C12—C8—C9 | 120.99 (17) |
| C10—O3—C9 | 122.99 (14) | O3—C9—C8 | 115.83 (16) |
| C2—C1—Cl1 | 119.13 (16) | O4—C9—O3 | 116.77 (16) |
| C2—C1—C6 | 121.90 (18) | O4—C9—C8 | 127.39 (18) |
| C6—C1—Cl1 | 118.94 (16) | O3—C10—C11 | 120.82 (17) |
| C1—C2—H2 | 120.4 | O3—C10—C16 | 117.30 (17) |
| C1—C2—C3 | 119.20 (18) | C16—C10—C11 | 121.88 (19) |
| C3—C2—H2 | 120.4 | C10—C11—C12 | 117.83 (17) |
| C2—C3—H3 | 120.6 | C10—C11—C13 | 118.25 (18) |
| C4—C3—C2 | 118.79 (17) | C13—C11—C12 | 123.85 (18) |
| C4—C3—H3 | 120.6 | C8—C12—C11 | 121.38 (17) |
| C3—C4—O1 | 115.54 (16) | C8—C12—H12 | 119.3 |
| C3—C4—C5 | 122.29 (17) | C11—C12—H12 | 119.3 |
| C5—C4—O1 | 122.01 (16) | C11—C13—H13 | 119.8 |
| C4—C5—H5 | 120.7 | C14—C13—C11 | 120.33 (19) |
| C4—C5—C6 | 118.56 (17) | C14—C13—H13 | 119.8 |
| C6—C5—H5 | 120.7 | C13—C14—H14 | 120.0 |
| C1—C6—C5 | 119.26 (18) | C13—C14—C15 | 119.9 (2) |
| C1—C6—H6 | 120.4 | C15—C14—H14 | 120.0 |
| C5—C6—H6 | 120.4 | C14—C15—H15 | 119.4 |
| O1—C7—C8 | 109.68 (15) | C16—C15—C14 | 121.15 (19) |
| O2—C7—O1 | 123.86 (17) | C16—C15—H15 | 119.4 |
| O2—C7—C8 | 126.34 (17) | C10—C16—H16 | 120.8 |
| C9—C8—C7 | 117.88 (16) | C15—C16—C10 | 118.43 (19) |
| C12—C8—C7 | 120.95 (16) | C15—C16—H16 | 120.8 |
| Cl1—C1—C2—C3 | −178.09 (13) | C7—C8—C9—O3 | −173.49 (15) |
| Cl1—C1—C6—C5 | 177.43 (14) | C7—C8—C9—O4 | 7.9 (3) |
| O1—C4—C5—C6 | −175.94 (16) | C7—C8—C12—C11 | 172.06 (16) |
| O1—C7—C8—C9 | −154.96 (14) | C9—O3—C10—C11 | −4.4 (2) |
| O1—C7—C8—C12 | 29.9 (2) | C9—O3—C10—C16 | 174.89 (16) |
| O2—C7—C8—C9 | 28.8 (3) | C9—C8—C12—C11 | −2.9 (3) |
| O2—C7—C8—C12 | −146.26 (18) | C10—O3—C9—O4 | −179.14 (15) |
| O3—C10—C11—C12 | 3.0 (2) | C10—O3—C9—C8 | 2.1 (2) |
| O3—C10—C11—C13 | −179.87 (15) | C10—C11—C12—C8 | 0.6 (3) |
| O3—C10—C16—C15 | −179.25 (16) | C10—C11—C13—C14 | −1.0 (3) |
| C1—C2—C3—C4 | 0.3 (3) | C11—C10—C16—C15 | 0.1 (3) |
| C2—C1—C6—C5 | −0.8 (3) | C11—C13—C14—C15 | 0.3 (3) |
| C2—C3—C4—O1 | 175.57 (15) | C12—C8—C9—O3 | 1.6 (2) |
| C2—C3—C4—C5 | 0.1 (3) | C12—C8—C9—O4 | −177.06 (18) |
| C3—C4—C5—C6 | −0.7 (3) | C12—C11—C13—C14 | 175.89 (18) |
| C4—O1—C7—O2 | 6.5 (2) | C13—C11—C12—C8 | −176.34 (16) |
| C4—O1—C7—C8 | −169.80 (14) | C13—C14—C15—C16 | 0.7 (3) |
| C4—C5—C6—C1 | 1.0 (3) | C14—C15—C16—C10 | −0.8 (3) |
| C6—C1—C2—C3 | 0.1 (3) | C16—C10—C11—C12 | −176.25 (17) |
| C7—O1—C4—C3 | 126.23 (16) | C16—C10—C11—C13 | 0.8 (3) |
| C7—O1—C4—C5 | −58.3 (2) |
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C3—H3···O2i | 0.95 | 2.34 | 3.061 (2) | 133 |
Symmetry code: (i) x, −y+1/2, z−1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: XU5453).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812003376/xu5453sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812003376/xu5453Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812003376/xu5453Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


