The added value of quantitative multi-voxel MR spectroscopy in breast magnetic resonance imaging

Abstract

Objective

To determine whether quantitative multivoxel MRS improves the accuracy of MRI in the assessment of breast lesions.

Methods

Twenty-five consecutive patients with 26 breast lesions ≥1 cm assessed as BI-RADS 3 or 4 with mammography underwent quantitative multivoxel MRS and contrast-enhanced MRI. The choline (Cho) concentration was calculated using the unsuppressed water signal as a concentration reference. ROC analysis established the diagnostic accuracy of MRI and MRS in the assessment of breast lesions.

Results

Respective Cho concentrations in 26 breast lesions re-classified by MRI as BI-RADS 2 (n = 5), 3 (n = 8), 4 (n = 5) and 5 (n = 8) were 1.16 ± 0.43 (mean ± SD), 1.43 ± 0.47, 2.98 ± 2.15 and 4.94 ± 3.10 mM. Two BI-RADS 3 lesions and all BI-RADS 4 and 5 lesions were malignant on histopathology and had Cho concentrations between 1.7 and 11.8 mM (4.03 ± 2.72 SD), which were significantly higher (P = 0.01) than that in the 11 benign lesions (0.4–1.5 mM; 1.19 ± 0.33 SD). Furthermore, Cho concentrations in the benign and malignant breast lesions in BI-RADS 3 category differed (P = 0.01). The accuracy of combined multivoxel MRS/breast MRI BI-RADS re-classification (AUC = 1.00) exceeded that of MRI alone (AUC = 0.96 ± 0.03).

Conclusions

These preliminary data indicate that multivoxel MRS improves the accuracy of MRI when using a Cho concentration cut-off ≤1.5 mM for benign lesions.

Key Points

• Quantitative multivoxel MR spectroscopy can improve the accuracy of contrast-enhanced breast MRI.

• Multivoxel-MRS can differentiate breast lesions by using the highest Cho-concentration.

• Multivoxel-MRS can exclude patients with benign breast lesions from further invasive diagnostic procedures.

Introduction

Breast magnetic resonance imaging (MRI) has emerged as an important diagnostic technique. With the use of morphological characteristics and kinetic analysis of the uptake of contrast agents in breast lesions on MRI, the sensitivity of breast MRI approaches 90% whereas the overall specificity of breast MRI varies between 67% and 72% [1–3]. Although the negative predictive value (NPV) of MRI in breast cancer is the highest of all imaging techniques (97%) [4–6], meaning that in most cases a negative breast MRI can safely rule out malignancy, breast MRI alone is still not the perfect technique.

The fourth edition of the Breast Imaging Reporting and Data System (BI-RADS) Atlas includes a new lexicon for breast MRI that promotes the standardisation of lesion descriptors and assessment categories [7]. This lexicon is based on the results of the International Working Group on Breast MRI and the American College of Radiology (ACR) Breast MRI Lexicon Committee and includes a BI-RADS 3 assessment category [7–10]. The guidelines for non-invasive diagnostic tests for breast abnormalities of the Agency for Health Care Research and Quality in the United States (AHRQ) state that the work-up of these probably benign findings is a short-term follow-up or biopsy [11]. At this moment most approaches are intuitive [11, 12]. It can be expected that most patients thus referred for biopsy have a benign lesion.

In addition to morphological and kinetic analysis, metabolic information is considered useful for the assessment of breast lesions. A promising approach to clarifying the precise nature (benign or malignant) of a lesion is the use of a non-invasive MRI method which is referred to as MR spectroscopy [13, 14]. The diagnostic value of MR spectroscopy is typically based on the detection of elevated levels of choline (Cho) compounds. MR spectroscopic studies of the breast have been either single-voxel [13–33] or multivoxel [34–40] investigations. The single-voxel technique has limitations in terms of lesion coverage. The general practice of including either the entire lesion or just its centre in the voxel, may result in the dilution of the elevated Cho levels in vital malignant tumours by the contributing necrotic and cystic tumour areas with low Cho levels, resulting in false-negative results [34, 38].

The multivoxel MR spectroscopic technique [also known as chemical-shift imaging (CSI)] acquires spectroscopic information from a large volume of interest subdivided into an array of voxels and has the potential to perform truly quantitative tissue characterisation [34–40]. This is necessary because Cho signals are not only detected in malignant breast lesions but also in benign breast lesions and normal fibroglandular tissues [13, 14, 17, 23, 25, 36]. Recently, multivoxel MR spectroscopy was used to measure Cho concentrations encountered in breast lesions [38].

The purpose of this study is to determine whether the Cho level measured by quantitative multivoxel MR spectroscopy can increase the accuracy of contrast-enhanced MRI in the assessment of breast lesions.

Materials and methods

Patient population

This prospective study was conducted between July 2009 and July 2010 at the University Medical Center Groningen and was approved by the Medical Ethical Committee of the University of Groningen. Informed consent was obtained from each patient before participation in the study.

Twenty-five consecutive patients (mean age: 48.7 years, age range: 32–69) with 26 breast lesions ≥1 cm assessed as BI-RADS 3 or BI-RADS 4 with mammography underwent multivoxel MR spectroscopy and contrast-enhanced MRI. Patients were excluded if there was a history of breast cancer, a haematoma of the breast or previous breast surgery including breast implants. The final diagnosis of the breast lesions was based on cytology or histology, considered the gold standard. Tissue samples were obtained by ultrasound-guided fine needle aspiration biopsy (FNAB) (n = 3), ultrasound-guided core biopsy (n = 5), MR-guided vacuum-assisted core biopsy (n = 1) or surgery (n = 17).

MR imaging

Magnetic resonance imaging was performed at 1.5 T using a whole-body MRI system (Avanto; Siemens Medical Solutions, Erlangen, Germany) with a dedicated bilateral breast coil and the patient in the prone position. The standard MRI protocol included diffusion-weighted imaging (DWI) with b-values 0, 50, 200, 500, 800 and 1000 s/mm². A T2-weighted turbo spin echo [repetition time (TR)/echo time (TE) 4500/102 ms, FOV 340 mm and slice thickness 4 mm] was performed in the transversal plane. A T1-weighted three-dimensional (3D) DynaVIEWS sequence (TR/TE/FA 4.17 ms/1.29 ms/10°, FOV 340 mm and slice thickness 0.97 mm, in total 1.04 min) in the transversal plane was made before and seven times after intravenous administration of 0.1 mmol/kg DOTAREM (0.5 mmol Gd/mL). The total duration of the dynamic study was approximately 9 min.

Multivoxel MR spectroscopy

The breast lesion was localised on DWI and T2-weighted MR images. After the location of the breast lesion was determined, the transverse and sagittal T2-weighted fast spin-echo series covering both breasts (TR/TE 4500/102 ms) performed without distortion correction were used for MR spectroscopy planning. The spectroscopic imaging protocol [38] included 2D-CSI with point-resolved spectroscopy (PRESS) double spin-echo with phase-encoding gradients between the slice selective 90° pulse and the first slice-selective optimised 180° pulse. 2D-CSI of the breast was performed twice, first without suppression of the water and fat signals (TR/TE 1500/30 ms) to serve as a reference measurement. The second measurement was with suppression of the water and fat signals (TR/TE 1500/135 ms) and with the same receiver gain. The center of k-space was sampled six times in a weighted elliptical fashion resulting in an acquisition time of 4.46 min. The field of view was 8 × 8 cm² to roughly cover the transverse cross-section of the examined breast, subdivided into 144 phase encode steps to yield voxels of 0.67 × 0.67 × 1 cm³ at a slice thickness of 1 cm. In this hybrid CSI technique the volume of interest (VOI), positioned over the suspect lesion, was smaller than the field of view (3 × 3 × 1 cm³) in order to end up with essentially measuring the watery part of the breast (glandular breast tissue, histopathology). Six additional nine-lobe sinc outer volume suppression pulses were applied before excitation, resulting in six outer volume suppression slabs of at least 3-cm thick on all sides of the VOI, and unwanted water and lipid signals were suppressed by band-selective inversion with gradient dephasing (BASING) [38]. Automated volume selective (linear plus higher order) shimming resulted in water-signal linewidths of 6 to 9 Hz for voxels within the VOI.

The multivoxel MR spectroscopy was performed before the T1-weighted images with contrast medium administration to prevent possible interference of metal chelate with the detectability of Cho [41, 42].

Data analysis

MR imaging

Subtracted images were obtained by subtracting pre-contrast images from the post-contrast images using commercially available software (CADstream, Confirma Inc., Kirkland WA, USA). MRI were coded using the ordered categories of the ACR BI-RADS lexicon [7]. The MR images were classified as normal if no enhancement was seen in the expected location of the mammographic finding (BI-RADS 1) or if only homogeneous or stippled enhancement was found in the breast, representing normal enhancing breast parenchyma or fibrocystic changes (BI-RADS 2). The lesions that were detected on the MRI and which corresponded with the area of the mammographic findings were assessed as focus, mass enhancement or non-mass like enhancement. For the enhancing lesions the location, lesion type, shape, border, distribution, internal enhancement and kinetic curves according to the BI-RADS lexicon were assessed and the lesions were classified as BI-RADS 3, 4 or 5 [7].

Multivoxel MR spectroscopy

In the post-processing 12 × 12 phase, encode steps were interpolated into a 16 × 16 matrix, i.e. voxels appearing as 0.5 × 0.5 × 1 cm³. The number of MR spectroscopic peaks fitted included the chemical shift ranges restricted to 3.1–3.3 ppm for Cho, 4.5–5.0 ppm for water and 1.0–1.5 ppm for the main resonance of fat (−CH₂-). Standardised postprocessing protocols were used for processing the raw data automatically, allowing for operator-independent quantifications. The postprocessing protocol for the water and fat suppressed series included Hanning filtering (width 700 ms, center 0 ms), zero filling from 512 to 1024 data points, Fourier transformation, polynomial baseline correction (with the above peak ranges excluded), phase correction and frequency-domain curve fitting to Gaussian lineshapes using the standard Singo software provided by the manufacturer of the MRI system.

For each lesion the highest concentration of the metabolite Cho amongst the various corresponding voxels was calculated from the relative peak areas of the resonances of Cho [N(CH₃)₃ at 3.23 ppm], denoted S _Cho, and water (H₂O at 4.7 ppm) using Eq. (1):

\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$ \left[ {{S_{\text{Cho}}}} \right] = {S_{\text{Cho}}}/{S_{{{{\text{H}}_{{2}}}{\text{O}}}}} \times {\text{TWC}} \times {1}/{\text{M}}{{\text{w}}_{{{{\text{H}}_{{2}}}{\text{O}}}}} \times {n_{{{{\text{H}}_{{2}}}{\text{O}}}}}/{n_{\text{Cho}}} \times {\text{T1sa}}{{\text{t}}_{{{{\text{H}}_{{2}}}{\text{O}}}}}/{\text{T1sa}}{{\text{t}}_{\text{Cho}}} \times {\text{T2sa}}{{\text{t}}_{{{{\text{H}}_{{2}}}{\text{O}}}}}/{\text{T2sa}}{{\text{t}}_{\text{Ch}}} $$\end{document} 1

To express concentrations in molar units (mol/L of tissue volume), literature values were adapted for the tissue water contents (TWC) of voxels containing breast tumour tissue, 82% [28]: the number of protons in the water molecule, \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$ {n_{{{{\text{H}}_{{2}}}{\text{O}}}}} $$\end{document} _, is 2, and that in the Cho group, n _Cho, is 9. \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$ {\text{M}}{{\text{w}}_{{{{\text{H}}_{{2}}}{\text{O}}}}} $$\end{document} represents the molecular weight of water.

The T1 and T2 saturation factors for water and Cho were calculated using literature values for T1 and T2 relaxation times of water and Cho as described elsewhere [38].

Statistical analysis

Breast lesions that MRI classified as BI-RADS 2 were considered benign and BI-RADS 3, 4 and 5 lesions were considered positive for malignancy. Sensitivity, specificity, positive predictive values (PPV), and negative predictive values (NPV) of breast contrast-enhanced MRI were calculated on the basis of final histopathology reports.

The mean and standard deviation of the highest Cho concentration of all benign and malignant lesions were calculated. Differences between the highest Cho measurements of benign and malignant breast lesions were tested for significance using the independent sample T test. A P value <0.05 was considered as statistically significant. Receiver operating characteristics (ROC) analysis was used to quantify the diagnostic accuracy of contrast-enhanced MRI and multivoxel MR spectroscopy in the assessment of breast lesions. Data were analysed in SPSS 16.0 (SPSS, Chicago, IL, USA) and STATA SE version 11.0 (STATA, College Station, TX, USA).

Results

The indication for undergoing mammographic examination was a palpable breast lesion in 17 (68.0%) patients. In 3 (12.0%) patients a suspicious lesion was found during the National Dutch Breast Cancer Screenings Programme. Three (12.0%) patients were screened because of a high risk of breast cancer. Two (8.0%) patients had a mammography because of an enlarged lymph node in the axilla.

Breast lesions

Twenty-six breast lesions were assessed (1 patient had both a mammographic BI-RADS 3 lesion and a BI-RADS 4 lesion in the same breast). Ten (38.5%) out of 26 breast lesions were classified as BI-RADS 3 and 16 (61.5%) breast lesions as BI-RADS 4 on the mammogram. The size of the benign lesions as seen on MRI varied between 10 and 21 mm. For malignant lesions the size was 10 to 80 mm.

MRI BI-RADS classification and multivoxel MR spectroscopy

Magnetic resonance imaging re-classified the 26 breast lesions as BI-RADS 2 (n = 5; 19.2%), BI-RADS 3 (n = 8; 30.8%), BI-RADS 4 (n = 5; 19.2%) and BI-RADS 5 (n = 8; 30.8%). The means of the highest Cho concentrations detected in these BI-RADS categories were 1.16 ± 0.43SD for five BI-RADS 2 lesions, 1.43 ± 0.47SD for eight BI-RADS 3 lesions, 2.98 ± 2.15SD for five BI-RADS 4 lesions and 4.94 ± 3.10SD for eight BI-RADS 5 lesions (Table 1).

Table 1.

MRI BI-RADS classification, number of voxels and the mean and standard deviation (SD) of the highest Cho concentration in benign and malignant breast lesions

MRI BI-RADS classification (number of benign + malignant lesions)	Number of voxels (range)	Highest Cho concentration (mM) (mean ± SD)
		All	Benign	Malignant	P value
5 BI-RADS 2 lesions (5 + 0)	2–6	1.16 ± 0.43	1.16 ± 0.43
8 BI-RADS 3 lesions (6 + 2)	2–6	1.43 ± 0.47	1.22 ± 0.26	2.05 ± 0.35	0.01
5 BI-RADS 4 lesions (0 + 5)	2–7	2.98 ± 2.15		2.98 ± 2.15
8 BI-RADS 5 lesions (0 + 8)	3–14	4.94 ± 3.10		4.94 ± 3.10
Total		1.19 ± 0.33		4.03 ± 2.72	0.01

The five MRI BI-RADS 2 lesions with a mean Cho concentration of 1.16 mM were benign: 3 were fibroadenomas and 2 showed no malignant cells after FNAB.

Two out of eight MRI BI-RADS 3 lesions turned out to be malignant and showed a mean Cho concentration of 2.05 mM. These two breast lesions were an invasive ductal carcinoma and an invasive lobular carcinoma. The other six MRI BI-RADS 3 lesions were benign and had a mean Cho concentration of 1.22 mM. One out of 6 benign breast lesions showed no malignant cells in the FNAB and the histologies of the other five lesions were: 2 fibroadenomas, lobular hyperplasia without atypia, epithelial hyperplasia without atypia and fibrosis with apocrine metaplasia. There was a significant difference in Cho concentration between the benign and malignant breast lesions in the BI-RADS 3 category (P = 0.01).

All five MRI BI-RADS 4 lesions and all eight MRI BI-RADS 5 lesions with a mean Cho concentration of 2.98 mM and 4.94 mM, respectively, showed malignancy after surgery: 10 invasive ductal carcinomas, 2 invasive lobular carcinoma (Fig. 1) and 1 metaplastic carcinoma.

Fig. 1.

Volume of interest (36 voxels of 0.25 cm³ each) centred on an invasive lobular carcinoma in the right breast of a 67-year-old patient and spectral map showing intense water and minor fat peaks in the lesion (a). This array of unsuppressed spectra is shown for the chemical shift range of 0–6 ppm. After application of water and fat suppression intense Cho signals are detected in the whole lesion as shown in green on the metabolic map (b). The highest detected Cho level (the red voxel on the metabolic map) is used for quantification. The sum of all tumour MR spectra together is shown in (c) where the fit for Cho is shown in red (range 2–4.5 ppm)

Furthermore, there was no overlap between the ranges in benign [0.4–1.5 mM (1.19 ± 0.33 SD)] and malignant lesions [1.7–11.8 mM (4.03 ± 2.72 SD)] (Tables 1, 2).

Table 2.

Mammographic and MRI BI-RADS classification, number of voxels, the highest Cho concentration and histopathology for 26 breast lesions

Mammographic BI-RADS category	MRI BI-RADS category	No. of voxels	Highest Cho concentration (mmol/L)	Histopathology
10 BI-RADS 3	4 BI-RADS 2	6	0.4	Fibroadenoma
		2	1.3	Fibroadenoma
		2	1.3	No malignant cells
		4	1.5	No malignant cells
	5 BI-RADS 3	6	1.3	Fibroadenoma
		2	1.3	Fibroadenoma
		4	1.5	Fibrosis with apocrine metaplasia
		4	1.0	Lobular hyperplasia without atypia
		4	0.8	No malignant cells
	1 BI-RADS 4	4	2.4	Invasive ductal carcinoma
16 BI-RADS 4	1 BI-RADS 2	2	1.3	Fibroadenoma
	3 BI-RADS 3	5	1.4	Epithelial hyperplasia without atypia
		2	1.8	Invasive ductal carcinoma
		2	2.3	Invasive lobular carcinoma
	4 BI-RADS 4	2	1.7	Invasive ductal carcinoma
		2	1.8	Invasive ductal carcinoma
		3	2.2	Invasive ductal carcinoma
		7	6.8	Invasive ductal carcinoma
	8 BI-RADS 5	3	2.5	Invasive ductal carcinoma
		4	4.1	Invasive ductal carcinoma
		4	2.4	Invasive ductal carcinoma
		6	4.6	Invasive ductal carcinoma
		4	6.8	Invasive ductal carcinoma
		5	11.8	Invasive lobular carcinoma
		14	3.4	Invasive lobular carcinoma (Fig. 1)
		7	3.9	Metaplastic carcinoma

Breast MRI without multivoxel MR spectroscopy had a sensitivity of 100%, specificity of 45.5%, PPV of 71.4% and NPV of 100%. ROC analysis revealed an area under the curve (AUC) of 0.96 ± 0.03 (95% CI: 0.91–1.00) for the accuracy of breast MRI in the assessment of breast lesions. Using a threshold of the Cho concentration of 1.5 mM as the distinction between benign and malignant lesions, the ROC analysis for multivoxel MR spectroscopy revealed an AUC of 1.00 (95% CI: 1.00–1.00) (Fig. 2).

Fig. 2.

ROC curves for the comparison of breast MRI and multivoxel MR spectroscopy in the assessment of breast lesions. There was a significant difference in the Cho concentrations between all benign and malignant lesions (P = 0.01)

Discussion

Breast MRI is an important diagnostic technique and with an NPV of 97% [4–6] it can safely exclude malignancy. Also, in this study the NPV of breast MRI is very high (100%) and therefore no further invasive diagnostic work-up is needed when breast lesions are assessed as BI-RADS 2 with MRI. However, breast MRI is still not perfect. Today BI-RADS is the communication tool in breast MRI reports and the most difficult breast lesions are those that are classified as BI-RADS 3 with MRI. The probability of a mammographic BI-RADS 3 lesion being cancerous is considered to be less than 2% by AHQR [11], but the acceptable cancer yield is not clearly defined for MRI BI-RADS 3 lesions. There are five articles that included data in the MRI BI-RADS 3 assessment category, with a resulting wide range of cancer yields (0.6–10%) [4, 43–46]. Although the diagnostic work-up of a BI-RADS 3 lesion can be a biopsy (instead of a follow-up breast MRI after 6 months) over 90% of patients who are referred for biopsy have a benign disease.

This present study indicates that the non-invasive quantitative multivoxel MR spectroscopic technique can be an additional tool to contrast-enhanced MRI in the assessment of breast lesions. The accuracy of breast MRI is excellent, but according to our preliminary results multivoxel MR spectroscopy shows an AUC of 1.00. There was no overlap between the outcomes of benign and malignant lesions for the highest Cho concentration, 0.4–1.5 mM and 1.7–11.8 mM, respectively. Cho concentrations over 1.5 mM are not found in benign lesions, such as fibroadenomas. In our study benign breast lesions that were classified as BI-RADS 3 with MRI had a highest Cho concentration ≤1.5 mM and were significantly different (P = 0.01) from the two malignant BI-RADS 3 lesions. In this way patients with benign BI-RADS 3 lesions can be excluded from further invasive diagnostic work-ups. Accordingly, it can be expected that the added value of non-invasive multivoxel MR spectroscopy applies to the MRI-classified BI-RADS 3 lesions.

There are only three previous studies featuring the diagnostic value of combined contrast-enhanced MRI and multivoxel MR spectroscopy in evaluating breast lesions. The conclusion of these three studies is that multivoxel MR spectroscopy appears to be a promising technique for the classification of breast lesions when contrast-enhanced MRI results are equivocal. Since the goal of contrast-enhanced MRI is to reach high sensitivity at the cost of specificity, the metabolic information measured by multivoxel MR spectroscopy may be used to improve the specificity in the diagnosis of breast tumours [34, 36, 37]. In the study of Baek et al. [34] multivoxel MR spectroscopy had a sensitivity of 81%, specificity of 78% and overall accuracy of 81% with the use of ROC analysis. These outcomes show lower sensitivity and specificity than the results in our study. A limitation of the three studies is that the area of the Cho was measured in the lesion and expressed relative to the background noise level (signal-to-noise ratio), which is not a quantitative measurement of Cho [34, 36, 37]. In our quantitative multivoxel MR spectroscopic study the detectability of abnormalities in the Cho level is improved by the measurement of the highest lesion Cho concentration with the ability to analyse the regional distribution of tumour metabolites.

A limitation of our study is that a small patient population is included. Another limitation is that only breast lesions ≥1 cm³ were included, reflecting the limited sensitivity of MR spectroscopy (voxels sixes were 0.25 cm³). Smaller breast lesions will have the problem that the measured lesion Cho levels are reduced by partial volume effects, reducing the changes of being able to demonstrate a malignant Cho profile. In the future, the use of more sensitive MRI systems operating at 3 T and higher may be expected to allow for the inclusion of smaller lesions. Also, in this study the breast lesions were measured by MR spectroscopy with DWI and T2-weighted imaging based positioning of the VOI and not planned on the contrast-enhanced T1-weighted images, acquired after the MR spectroscopy to avoid the likely influence of contrast medium on the measured Cho concentration. This can be a problem if the breast lesion is not visible with the first two sequences (DWI and T2). Furthermore, the methodology of this study has some technical limitations regarding partial volume effects, water and fat suppression, whole breast coverage in acceptable imaging times and quantification. Nevertheless, in this quantitative multivoxel MR spectroscopic study Cho concentrations are measured more accurately and a significant difference (P = 0.01) between benign and malignant lesions for the highest Cho concentration is shown.

In conclusion, this study indicates that the non-invasive quantitative multivoxel MR spectroscopic technique can improve the accuracy of contrast-enhanced MRI in the assessment of breast lesions, especially for breast lesions classified as BI-RADS 3. A Cho concentration over 1.5 mM was not found in benign breast lesions with a volume ≥1 cm³ and therefore these lesions can be excluded from further diagnostic work-up. Nevertheless, larger patient samples are needed to reinforce these conclusions.