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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Feb 29;68(Pt 3):o901. doi: 10.1107/S1600536812007829

N-(2-Hy­droxy­eth­yl)-5-(4-meth­oxy­phen­yl)-4H-pyrazole-3-carboxamide

Guangqian Han a, Jiaguo Lv b,*, Ju Zhu b, Youjun Zhou b, Defeng Wu a,*
PMCID: PMC3297946  PMID: 22412749

Abstract

In the title compound, C13H15N3O3, the dihedral angle between the benzene and pyrazole rings is 7.7 (1)° and the O—C—C—N torsion angle of the side chain is 74.1 (2)°. In the crystal, mol­ecules are linked by O—H⋯O, N—H⋯O and N—H⋯N hydrogen bonds.

Related literature  

For the biological activities of pyrazole derivatives, see: Qi et al. (2011). For a related structure, see: Shi & Xie (2011).graphic file with name e-68-0o901-scheme1.jpg

Experimental  

Crystal data  

  • C13H15N3O3

  • M r = 261.28

  • Monoclinic, Inline graphic

  • a = 21.82 (5) Å

  • b = 10.08 (2) Å

  • c = 12.28 (3) Å

  • β = 110.53 (3)°

  • V = 2531 (11) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 0.10 mm−1

  • T = 293 K

  • 0.20 × 0.15 × 0.06 mm

Data collection  

  • Bruker SMART CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2000) T min = 0.980, T max = 0.994

  • 5292 measured reflections

  • 2366 independent reflections

  • 1841 reflections with I > 2σ(I)

  • R int = 0.074

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.054

  • wR(F 2) = 0.156

  • S = 1.05

  • 2366 reflections

  • 175 parameters

  • H-atom parameters constrained

  • Δρmax = 0.26 e Å−3

  • Δρmin = −0.30 e Å−3

Data collection: SMART (Bruker, 2000); cell refinement: SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812007829/hb6641sup1.cif

e-68-0o901-sup1.cif (16.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812007829/hb6641Isup2.hkl

e-68-0o901-Isup2.hkl (116.4KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812007829/hb6641Isup3.cdx

Supplementary material file. DOI: 10.1107/S1600536812007829/hb6641Isup4.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O3—H3⋯O2i 0.82 1.88 2.668 (5) 162
N3—H3B⋯N2ii 0.86 2.54 3.318 (7) 151
N1—H1D⋯O3ii 0.86 1.90 2.739 (5) 166

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

supplementary crystallographic information

Experimental

A mixture of diethyl oxalate (0.1 mol), 1-(4-methoxyphenyl)ethanone (0.05 mol) and sodium ethylate (400 ml 0.1 mol) were stirred for 8 h at room temperature. It was then poured into diluted acetic acid and was further stirred for 20 min and then filtered to give the yellow solid and dried. Then this dried solid and hydrazine (0.05 mol) in ethanol (200 ml) refluxed for 3.5 h and then stood for 8 h yielded the yellow solid. The solid (0.004 mol) subsequently was reacted with ethanolamine (20 ml) for 4 h at 80 °C in the presence of pyridine (20 ml). The mixture was then poured into ice cold water to afford the white solid. The compound was recrystallized from methanol as colourless slabs. Yield: 0.75 g, 70.7%. M. p.: 470 K.

Refinement

All hydrogen atoms were placed in calculated positions using a riding model, with d(C—H) = 0.93 Å for aromatic, 0.97 Å for CH2 and 0.96 Å for CH3 atoms, and with Uiso(H) = 1.2–1.5Ueq(C, O).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, with 30% probability displacement ellipsoids for non-H atoms.

Fig. 2.

Fig. 2.

Hydrogen bonds in the title compound.

Crystal data

C13H15N3O3 Dx = 1.372 Mg m3
Mr = 261.28 Melting point: 470 K
Monoclinic, C2/c Mo Kα radiation, λ = 0.71073 Å
a = 21.82 (5) Å Cell parameters from 925 reflections
b = 10.08 (2) Å θ = 3.1–26.4°
c = 12.28 (3) Å µ = 0.10 mm1
β = 110.53 (3)° T = 293 K
V = 2531 (11) Å3 Slab, colorless
Z = 8 0.20 × 0.15 × 0.06 mm
F(000) = 1104

Data collection

Bruker SMART CCD diffractometer 2366 independent reflections
Radiation source: fine-focus sealed tube 1841 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.074
phi and ω scans θmax = 25.5°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2000) h = −26→10
Tmin = 0.980, Tmax = 0.994 k = −12→12
5292 measured reflections l = −13→14

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.054 H-atom parameters constrained
wR(F2) = 0.156 w = 1/[σ2(Fo2) + (0.0917P)2 + 0.0958P] whereP = (Fo2 + 2Fc2)/3
S = 1.05 (Δ/σ)max < 0.001
2366 reflections Δρmax = 0.26 e Å3
175 parameters Δρmin = −0.30 e Å3
0 restraints Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.0026 (8)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
N1 0.29642 (7) 0.24543 (15) 0.29533 (13) 0.0426 (4)
H1D 0.3331 0.2866 0.3241 0.051*
N2 0.25083 (7) 0.24377 (15) 0.34610 (13) 0.0433 (4)
N3 0.13697 (7) 0.21072 (15) 0.39238 (13) 0.0414 (4)
H3B 0.1720 0.2410 0.4441 0.050*
O1 0.44500 (7) 0.12084 (15) −0.06540 (14) 0.0593 (5)
O2 0.09398 (6) 0.09459 (14) 0.22772 (11) 0.0526 (4)
O3 0.09522 (7) 0.10663 (15) 0.58747 (12) 0.0575 (4)
H3 0.0904 0.0361 0.6168 0.086*
C1 0.42987 (12) 0.0298 (2) −0.15960 (19) 0.0621 (6)
H1A 0.4244 −0.0573 −0.1329 0.093*
H1B 0.4649 0.0286 −0.1898 0.093*
H1C 0.3901 0.0567 −0.2197 0.093*
C2 0.40166 (9) 0.13059 (18) −0.00812 (17) 0.0435 (5)
C3 0.34387 (9) 0.06118 (19) −0.03558 (17) 0.0470 (5)
H3A 0.3312 0.0034 −0.0986 0.056*
C4 0.30463 (9) 0.0776 (2) 0.03073 (18) 0.0455 (5)
H4 0.2660 0.0292 0.0120 0.055*
C5 0.32117 (8) 0.16408 (18) 0.12430 (15) 0.0387 (4)
C6 0.37895 (10) 0.23460 (19) 0.14879 (18) 0.0481 (5)
H6 0.3909 0.2949 0.2100 0.058*
C7 0.41911 (10) 0.2177 (2) 0.08479 (19) 0.0512 (6)
H7 0.4581 0.2649 0.1041 0.061*
C8 0.27897 (9) 0.17627 (17) 0.19481 (15) 0.0382 (4)
C9 0.21809 (9) 0.12518 (19) 0.17982 (16) 0.0416 (5)
H9 0.1924 0.0720 0.1192 0.050*
C10 0.20311 (8) 0.17037 (18) 0.27537 (16) 0.0386 (4)
C11 0.14091 (8) 0.15331 (17) 0.29704 (15) 0.0377 (4)
C12 0.07505 (9) 0.22326 (18) 0.41093 (16) 0.0400 (5)
H12A 0.0407 0.2374 0.3362 0.048*
H12B 0.0769 0.3015 0.4579 0.048*
C13 0.05641 (9) 0.10679 (19) 0.46890 (16) 0.0426 (5)
H13A 0.0105 0.1126 0.4600 0.051*
H13B 0.0630 0.0250 0.4329 0.051*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
N1 0.0394 (8) 0.0550 (10) 0.0340 (9) −0.0095 (7) 0.0135 (7) −0.0065 (7)
N2 0.0441 (9) 0.0540 (10) 0.0343 (9) −0.0066 (7) 0.0169 (7) −0.0064 (7)
N3 0.0376 (8) 0.0561 (10) 0.0301 (8) −0.0080 (7) 0.0114 (7) −0.0086 (7)
O1 0.0660 (10) 0.0645 (10) 0.0627 (10) −0.0145 (7) 0.0417 (9) −0.0168 (7)
O2 0.0388 (8) 0.0742 (10) 0.0420 (8) −0.0095 (6) 0.0107 (6) −0.0206 (7)
O3 0.0585 (9) 0.0622 (10) 0.0378 (8) −0.0229 (7) −0.0006 (7) 0.0077 (6)
C1 0.0806 (16) 0.0644 (14) 0.0562 (14) −0.0077 (12) 0.0429 (13) −0.0116 (11)
C2 0.0514 (11) 0.0425 (10) 0.0417 (11) −0.0008 (8) 0.0229 (9) 0.0007 (8)
C3 0.0550 (12) 0.0480 (11) 0.0410 (11) −0.0055 (9) 0.0205 (10) −0.0091 (9)
C4 0.0432 (10) 0.0507 (11) 0.0427 (11) −0.0080 (8) 0.0152 (9) −0.0054 (9)
C5 0.0413 (10) 0.0416 (10) 0.0336 (10) 0.0009 (8) 0.0134 (8) 0.0027 (8)
C6 0.0537 (12) 0.0507 (11) 0.0441 (11) −0.0116 (9) 0.0225 (10) −0.0121 (9)
C7 0.0520 (12) 0.0549 (12) 0.0527 (13) −0.0147 (9) 0.0257 (10) −0.0094 (10)
C8 0.0418 (10) 0.0413 (9) 0.0301 (10) −0.0004 (8) 0.0108 (8) −0.0003 (7)
C9 0.0403 (10) 0.0514 (11) 0.0318 (10) −0.0060 (8) 0.0110 (8) −0.0068 (8)
C10 0.0367 (9) 0.0458 (10) 0.0320 (9) −0.0017 (7) 0.0102 (8) −0.0015 (8)
C11 0.0379 (10) 0.0443 (10) 0.0298 (9) −0.0006 (8) 0.0106 (8) −0.0013 (7)
C12 0.0388 (10) 0.0486 (11) 0.0320 (10) 0.0018 (8) 0.0118 (8) −0.0009 (8)
C13 0.0390 (10) 0.0499 (11) 0.0355 (10) −0.0082 (8) 0.0087 (8) −0.0044 (8)

Geometric parameters (Å, º)

N1—N2 1.347 (3) C3—H3A 0.9300
N1—C8 1.351 (3) C4—C5 1.386 (4)
N1—H1D 0.8600 C4—H4 0.9300
N2—C10 1.324 (3) C5—C6 1.385 (4)
N3—C11 1.336 (4) C5—C8 1.474 (3)
N3—C12 1.452 (4) C6—C7 1.378 (4)
N3—H3B 0.8600 C6—H6 0.9300
O1—C2 1.366 (3) C7—H7 0.9300
O1—C1 1.422 (4) C8—C9 1.376 (4)
O2—C11 1.230 (3) C9—C10 1.400 (4)
O3—C13 1.405 (4) C9—H9 0.9300
O3—H3 0.8200 C10—C11 1.482 (4)
C1—H1A 0.9600 C12—C13 1.502 (4)
C1—H1B 0.9600 C12—H12A 0.9700
C1—H1C 0.9600 C12—H12B 0.9700
C2—C3 1.377 (4) C13—H13A 0.9700
C2—C7 1.383 (4) C13—H13B 0.9700
C3—C4 1.383 (3)
N2—N1—C8 113.55 (19) C5—C6—H6 119.2
N2—N1—H1D 123.2 C6—C7—C2 120.2 (2)
C8—N1—H1D 123.2 C6—C7—H7 119.9
C10—N2—N1 104.0 (2) C2—C7—H7 119.9
C11—N3—C12 121.65 (15) N1—C8—C9 105.35 (16)
C11—N3—H3B 119.2 N1—C8—C5 123.1 (2)
C12—N3—H3B 119.2 C9—C8—C5 131.5 (2)
C2—O1—C1 117.42 (19) C8—C9—C10 105.33 (19)
C13—O3—H3 109.5 C8—C9—H9 127.3
O1—C1—H1A 109.5 C10—C9—H9 127.3
O1—C1—H1B 109.5 N2—C10—C9 111.8 (2)
H1A—C1—H1B 109.5 N2—C10—C11 120.4 (2)
O1—C1—H1C 109.5 C9—C10—C11 127.62 (17)
H1A—C1—H1C 109.5 O2—C11—N3 121.4 (2)
H1B—C1—H1C 109.5 O2—C11—C10 121.6 (2)
O1—C2—C3 125.3 (2) N3—C11—C10 116.86 (16)
O1—C2—C7 115.5 (2) N3—C12—C13 115.33 (17)
C3—C2—C7 119.21 (18) N3—C12—H12A 108.4
C2—C3—C4 119.9 (2) C13—C12—H12A 108.4
C2—C3—H3A 120.1 N3—C12—H12B 108.4
C4—C3—H3A 120.1 C13—C12—H12B 108.4
C3—C4—C5 121.9 (2) H12A—C12—H12B 107.5
C3—C4—H4 119.0 O3—C13—C12 109.12 (19)
C5—C4—H4 119.0 O3—C13—H13A 109.9
C6—C5—C4 117.09 (18) C12—C13—H13A 109.9
C6—C5—C8 122.5 (2) O3—C13—H13B 109.9
C4—C5—C8 120.3 (2) C12—C13—H13B 109.9
C7—C6—C5 121.7 (2) H13A—C13—H13B 108.3
C7—C6—H6 119.2

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
O3—H3···O2i 0.82 1.88 2.668 (5) 162
N3—H3B···N2ii 0.86 2.54 3.318 (7) 151
N1—H1D···O3ii 0.86 1.90 2.739 (5) 166

Symmetry codes: (i) x, −y, z+1/2; (ii) −x+1/2, −y+1/2, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB6641).

References

  1. Bruker (2000). SMART, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Qi, J. J., Zhu, J., Liu, X. F., Ding, L. L., Zheng, C. H., Han, G. Q., Lv, J. G. & Zhou, Y. J. (2011). Bioorg. Med. Chem. Lett. 21, 5822–5825. [DOI] [PubMed]
  3. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  4. Shi, C.-X. & Xie, Y.-M. (2011). Acta Cryst. E67, o1084. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812007829/hb6641sup1.cif

e-68-0o901-sup1.cif (16.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812007829/hb6641Isup2.hkl

e-68-0o901-Isup2.hkl (116.4KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812007829/hb6641Isup3.cdx

Supplementary material file. DOI: 10.1107/S1600536812007829/hb6641Isup4.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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