Table 2.

Top 20 Bovine Rhodopsin conformations after BiHelix/CombiHelix. The conformation observed in the bovine rhosopsin crystal structure (1u19) is shown in green cells. The helix rotation angles for TM3 and TM6 as observed in opsin crystal structure (2z73) are shown in pink cells.

SCHRNK	SCH-Energy	SBHRNK	SBH-Energy	Eta1	Eta2	Eta3	Eta4	Eta5	Eta6	Eta7	CRmsd
1	250	1	211	0	0	0	0	0	0	0	0.0
2	252	3	246	0	0	0	0	0	330	0	0.7
3	268	12	267	0	0	0	0	150	0	0	1.6
4	284	4	250	0	0	0	0	60	0	0	0.9
5	285	20	275	0	0	0	0	180	0	0	1.7
6	287	11	267	0	0	0	0	300	0	0	0.9
7	292	335	338	0	0	330	0	0	0	0	0.6
8	293	2	241	0	0	0	0	90	0	0	1.2
9	302	5	253	0	0	0	0	330	0	0	0.5
10	305	7	255	0	0	0	0	0	90	0	1.7
11	306	22	275	0	0	0	0	0	300	0	1.2
12	318	71	302	0	0	0	0	180	330	0	1.8
13	320	720	358	0	0	330	30	0	0	0	0.7
14	320	8	262	0	0	0	0	0	270	0	1.7
15	324	37	286	0	0	0	0	210	0	0	1.6
16	325	134	314	0	0	0	0	180	90	0	2.4
17	329	10	264	0	0	0	0	0	0	330	0.5
18	332	13	267	0	0	0	0	0	0	30	0.5
19	332	16	272	0	0	0	0	330	330	0	0.8
20	333	30	282	0	0	0	0	90	90	0	2.0