Table IV.
LD between significant SNPs and index SNPs in different populations
| Region | SNP pair | The present study |
The HapMap project |
||||||||||
| AA |
BB |
NG |
CEU |
CHB |
YRI |
||||||||
| r2 | D′ | r2 | D′ | r2 | D′ | r2 | D′ | r2 | D′ | r2 | D′ | ||
| 6q25.1 | rs2046210–rs9397435 | 0.06 | 1.00 | 0.06 | 1.00 | 0.04 | 1.00 | 0.10 | 1.00 | 0.86 | 1.00 | 0.04 | 1.00 |
| 10q26 | rs2981578–rs1219648 | 0.13 | 0.98 | 0.08 | 1.00 | 0.05 | 1.00 | 0.85 | 1.00 | 0.32 | 0.83 | 0.06 | 1.00 |
| rs2981578–rs2981582 | 0.16 | 0.99 | 0.08 | 0.94 | 0.05 | 0.90 | 0.85 | 1.00 | 0.15 | 0.67 | 0.08 | 1.00 | |
| rs1219648–rs2981582 | 0.38 | 0.67 | 0.37 | 0.67 | 0.31 | 0.63 | 1.00 | 1.00 | 0.64 | 0.93 | 0.28 | 0.60 | |
| 16q12 | rs3803662–rs3104793 | 0.08 | 0.33 | 0.15 | 0.50 | 0.35 | 0.87 | 0.14 | 0.53 | 0.44 | 0.89 | 0.49 | 0.81 |
AA, African American; BB, Barbadian; CEU, Utah residents with Northern and Western European ancestry from the CEPH collection; CHB, Han Chinese in Beijing, China; JPT, Japanese in Tokyo, Japan; NG, Nigerian; YRI, Yoruba in Ibadan, Nigeria.