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. 1992 May 11;20(Suppl):2023–2026. doi: 10.1093/nar/20.suppl.2023

The PIR-International Protein Sequence Database

Winona C Barker 1, David G George 1, Hans-Werner Mewes 2, Akira Tsugita 3
PMCID: PMC333980  PMID: 1375994

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Barker W. C., George D. G., Hunt L. T., Garavelli J. S. The PIR protein sequence database. Nucleic Acids Res. 1991 Apr 25;19 (Suppl):2231–2236. doi: 10.1093/nar/19.suppl.2231. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Barker W. C., George D. G., Hunt L. T. Protein sequence database. Methods Enzymol. 1990;183:31–49. doi: 10.1016/0076-6879(90)83005-t. [DOI] [PubMed] [Google Scholar]
  3. Benson D., Boguski M., Lipman D., Ostell J. The National Center for Biotechnology Information. Genomics. 1990 Feb;6(2):389–391. doi: 10.1016/0888-7543(90)90583-g. [DOI] [PubMed] [Google Scholar]
  4. Burks C., Cassidy M., Cinkosky M. J., Cumella K. E., Gilna P., Hayden J. E., Keen G. M., Kelley T. A., Kelly M., Kristofferson D. GenBank. Nucleic Acids Res. 1991 Apr 25;19 (Suppl):2221–2225. doi: 10.1093/nar/19.suppl.2221. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Dayhoff M. O. The origin and evolution of protein superfamilies. Fed Proc. 1976 Aug;35(10):2132–2138. [PubMed] [Google Scholar]
  6. George D. G., Mewes H. W., Kihara H. A standardized format for sequence data exchange. Protein Seq Data Anal. 1987;1(1):27–39. [PubMed] [Google Scholar]
  7. Guigó R., Johansson A., Smith T. F. Automatic evaluation of protein sequence functional patterns. Comput Appl Biosci. 1991 Jul;7(3):309–315. doi: 10.1093/bioinformatics/7.3.309. [DOI] [PubMed] [Google Scholar]
  8. Kahn P., Cameron G. EMBL Data Library. Methods Enzymol. 1990;183:23–31. doi: 10.1016/0076-6879(90)83004-s. [DOI] [PubMed] [Google Scholar]
  9. Lipman D. J., Pearson W. R. Rapid and sensitive protein similarity searches. Science. 1985 Mar 22;227(4693):1435–1441. doi: 10.1126/science.2983426. [DOI] [PubMed] [Google Scholar]
  10. Merriam J., Ashburner M., Hartl D. L., Kafatos F. C. Toward cloning and mapping the genome of Drosophila. Science. 1991 Oct 11;254(5029):221–225. doi: 10.1126/science.254.5029.221. [DOI] [PubMed] [Google Scholar]
  11. Orcutt B. C., George D. G., Dayhoff M. O. Protein and Nucleic Acid Sequence Database Systems. Annu Rev Biophys Bioeng. 1983;12:419–441. doi: 10.1146/annurev.bb.12.060183.002223. [DOI] [PubMed] [Google Scholar]
  12. Pattabiraman N., Namboodiri K., Lowrey A., Gaber B. P. NRL-3D: a sequence-structure database derived from the protein data bank (PDB) and searchable within the PIR environment. Protein Seq Data Anal. 1990 Oct;3(5):387–405. [PubMed] [Google Scholar]
  13. Pearson P. L. The genome data base (GDB)--a human gene mapping repository. Nucleic Acids Res. 1991 Apr 25;19 (Suppl):2237–2239. doi: 10.1093/nar/19.suppl.2237. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Pearson W. R. Searching protein sequence libraries: comparison of the sensitivity and selectivity of the Smith-Waterman and FASTA algorithms. Genomics. 1991 Nov;11(3):635–650. doi: 10.1016/0888-7543(91)90071-l. [DOI] [PubMed] [Google Scholar]
  15. Seto Y., Ikeuchi Y., Kanehisa M. Fragment peptide library for classification and functional prediction of proteins. Proteins. 1990;8(4):341–351. doi: 10.1002/prot.340080408. [DOI] [PubMed] [Google Scholar]

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