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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Mar 3;68(Pt 4):o961. doi: 10.1107/S1600536812008914

2-(2H-1,3-Benzodioxol-5-yl)-1,3-benzo­thia­zole

D Lakshmanan a, S Murugavel b,*, R Selvakumar c, M Bakthadoss c,
PMCID: PMC3343939  PMID: 22590020

Abstract

In the title compound, C14H9O2S, the benzothia­zole unit is oriented at a dihedral angle of 7.1 (1)° with respect to the benzodioxole unit. The dioxole ring adopts flattened envelope conformation with the methyl­ene C atom at the flap. The crystal packing is stabilized by π–π inter­actions [centroid–centroid distances = 3.705 (1) and 3.752 (1) Å], C—H⋯π inter­actions and a short S⋯S contact of 3.485 (1) Å.

Related literature  

For background to the applications of benzothia­zoles in the chemical industry, see: Bradshaw et al. (2002); Delmas et al. (2002); Hutchinson et al. (2002). For the pharmacological activity of benzothia­zole derivatives, see: Repiĉ et al. (2001); Schwartz et al. (1992). For ring puckering analysis, see: Cremer & Pople (1975). For related structures, see: Baryala et al. (2010); Zhang et al. (2008).graphic file with name e-68-0o961-scheme1.jpg

Experimental  

Crystal data  

  • C14H9NO2S

  • M r = 255.28

  • Orthorhombic, Inline graphic

  • a = 6.3356 (2) Å

  • b = 16.3222 (5) Å

  • c = 22.0471 (7) Å

  • V = 2279.91 (12) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 0.28 mm−1

  • T = 293 K

  • 0.25 × 0.23 × 0.18 mm

Data collection  

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.934, T max = 0.952

  • 15338 measured reflections

  • 3135 independent reflections

  • 2243 reflections with I > 2σ(I)

  • R int = 0.027

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.039

  • wR(F 2) = 0.105

  • S = 1.02

  • 3135 reflections

  • 163 parameters

  • H-atom parameters constrained

  • Δρmax = 0.29 e Å−3

  • Δρmin = −0.24 e Å−3

Data collection: APEX2 (Bruker, 2004); cell refinement: APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812008914/gk2459sup1.cif

e-68-0o961-sup1.cif (21.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812008914/gk2459Isup2.hkl

e-68-0o961-Isup2.hkl (150.8KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812008914/gk2459Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg1 is the centroid of the dioxole ring and Cg2 is the centroid of the C2–C7 benzene ring.

D—H⋯A D—H H⋯A DA D—H⋯A
C5—H5⋯Cg1i 0.93 2.79 3.624 (2) 150
C14—H14BCg2ii 0.97 2.84 3.580 (2) 134

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors thank Dr Babu Vargheese, SAIF, IIT, Madras, India, for his help with the data collection.

supplementary crystallographic information

Comment

Benzothiazoles are remarkable heterocyclic ring systems. They possess therapeutic value, are synthetic intermediates in the preparation of medicinal compounds and find numerous applications in chemical industry (Bradshaw et al., 2002; Hutchinson et al., 2002; Delmas et al., 2002). Benzothiazole nucleus is associated with several pharmacological activities such as anti-tumor (Repiĉ et al., 2001) and antimicrobial (Schwartz et al., 1992). In view of this biological importance, the crystal structure of the title compound has been determined and the results are presented here.

Fig. 1. shows a displacement ellipsoid plot of (I), with the atom numbering scheme. The benzothiazole moiety is essentially planar [maximum deviation = -0.016 (1) Å for the C14 atom] and lies at an angle 7.1 (1)° with respect to the benzodioxole unit. The dioxole (O1/O2/C11/C12/C14) ring adopts an envelope conformation with the C14 (displacement = 0.03 (18) Å) atom as the flap atom and with puckering parameters (Cremer & Pople, 1975), q2 = 0.0882 (16) Å and φ2 = 143.8 (1)°. The geometric parameters of the title molecule agree well with those reported for similar structures (Baryala et al., 2010; Zhang et al., 2008).

The crystal packing is stabilized by π—π interactions with Cg3···Cg4i and Cg1···Cg4i seperations of 3.705 (1) Å and 3.752 (1) Å, respectively (Fig. 2; Cg1, Cg3 and Cg4 are the centroids of the N1/S1/C1/C2/C7 thiazole ring, C2–C7 benzene ring and C8–C13 benzene ring, respectively, symmetry code as in Fig. 2). The crystal packing (Fig. 3) is further stabilized by a short contact S1···S1iii [3.485 (1) Å; symmetry code: (iii) = -x, 1 - y, 1 - z], which is shorter than the sum of the van der Waals radii of these atoms [3.60 Å].

Experimental

A mixture of benzo[d][1,3]dioxole-5-carbaldehyde (0.15 g, 1 mmol), 2-aminobenzenethiol (0.125 g, 1 mmol), H2O2 (0.013 g, 0.4 mmol) and NH4Ce(NO3)6 (0.053 g, 0.1 mmol) was heated at 50°C for 12 h. After completion of the reaction, the reaction mixture was dissolved in EtOH and then poured into ice–water. The products were filtered, washed with ice-water, and subsequently dried. Recystallization of the product from ethyl acetate: hexanes (1: 10) yielded colourless crystals of the title compound (0.22 g; yield: 91%).

Refinement

All the H atoms were positioned geometrically, with C–H = 0.93–0.97 Å and constrained to ride on their parent atom, with Uiso(H) =1.5Ueq for methyl H atoms and 1.2Ueq(C) for other H atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with the atom numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are presented as a small spheres of arbitrary radius.

Fig. 2.

Fig. 2.

A view of the π···π interactions (dotted lines) in the crystal structure of the title compound. Cg1, Cg2, Cg3 and Cg4 are the centroids of the N1/S1/C1/C2/C7 thiazole ring, O1/O2/C11/C12/C14 dioxole ring, C2–C7 benzene ring and C8–C13 benzene ring, respectively [symmetry codes: (i)1 + x, y, z; (ii) -1 + x, y, z].

Fig. 3.

Fig. 3.

Part of the crystal structure showing a short S···S contact [symmetry code: (iii) = -x, 1 - y, 1 - z].

Crystal data

C14H9NO2S F(000) = 1056
Mr = 255.28 Dx = 1.487 Mg m3
Orthorhombic, Pbca Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2ab Cell parameters from 3185 reflections
a = 6.3356 (2) Å θ = 2.7–29.5°
b = 16.3222 (5) Å µ = 0.28 mm1
c = 22.0471 (7) Å T = 293 K
V = 2279.91 (12) Å3 Block, colourless
Z = 8 0.25 × 0.23 × 0.18 mm

Data collection

Bruker APEXII CCD diffractometer 3135 independent reflections
Radiation source: fine-focus sealed tube 2243 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.027
Detector resolution: 10.0 pixels mm-1 θmax = 29.5°, θmin = 2.7°
ω scans h = −7→8
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) k = −22→19
Tmin = 0.934, Tmax = 0.952 l = −30→30
15338 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.105 H-atom parameters constrained
S = 1.02 w = 1/[σ2(Fo2) + (0.0459P)2 + 0.5885P] where P = (Fo2 + 2Fc2)/3
3135 reflections (Δ/σ)max < 0.001
163 parameters Δρmax = 0.29 e Å3
0 restraints Δρmin = −0.24 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C2 0.3453 (2) 0.55583 (8) 0.34631 (6) 0.0361 (3)
C3 0.5016 (3) 0.53503 (10) 0.30472 (7) 0.0467 (4)
H3 0.5044 0.5591 0.2665 0.056*
C4 0.6519 (3) 0.47847 (11) 0.32101 (8) 0.0536 (4)
H4 0.7554 0.4637 0.2932 0.064*
C5 0.6523 (3) 0.44284 (10) 0.37826 (9) 0.0540 (4)
H5 0.7562 0.4049 0.3882 0.065*
C6 0.5011 (3) 0.46295 (10) 0.42024 (8) 0.0497 (4)
H6 0.5013 0.4393 0.4586 0.060*
C7 0.3482 (2) 0.51935 (9) 0.40395 (7) 0.0389 (3)
C1 0.0600 (2) 0.61568 (8) 0.38384 (6) 0.0352 (3)
C8 −0.1316 (2) 0.66515 (9) 0.38831 (6) 0.0361 (3)
C9 −0.2413 (3) 0.67047 (10) 0.44268 (6) 0.0426 (4)
H9 −0.1896 0.6427 0.4764 0.051*
C10 −0.4255 (3) 0.71583 (10) 0.44857 (7) 0.0482 (4)
H10 −0.4971 0.7194 0.4853 0.058*
C11 −0.4962 (2) 0.75501 (9) 0.39779 (7) 0.0423 (3)
C14 −0.6822 (3) 0.82343 (13) 0.32904 (9) 0.0610 (5)
H14A −0.8035 0.7967 0.3110 0.073*
H14B −0.6977 0.8821 0.3238 0.073*
C12 −0.3898 (2) 0.74996 (9) 0.34317 (7) 0.0399 (3)
C13 −0.2079 (2) 0.70649 (9) 0.33649 (7) 0.0395 (3)
H13 −0.1373 0.7041 0.2996 0.047*
N1 0.17928 (19) 0.61002 (7) 0.33610 (5) 0.0374 (3)
O1 −0.6701 (2) 0.80397 (8) 0.39209 (6) 0.0589 (3)
O2 −0.49343 (19) 0.79602 (7) 0.30038 (5) 0.0559 (3)
S1 0.13899 (7) 0.55612 (3) 0.445920 (18) 0.05001 (14)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C2 0.0354 (8) 0.0350 (7) 0.0380 (7) −0.0045 (6) −0.0022 (6) −0.0013 (5)
C3 0.0491 (10) 0.0484 (9) 0.0426 (8) −0.0004 (8) 0.0053 (7) −0.0030 (6)
C4 0.0486 (10) 0.0508 (9) 0.0613 (11) 0.0041 (8) 0.0078 (8) −0.0119 (8)
C5 0.0499 (10) 0.0412 (9) 0.0710 (12) 0.0092 (8) −0.0066 (9) −0.0042 (8)
C6 0.0515 (10) 0.0455 (8) 0.0523 (9) 0.0040 (8) −0.0069 (8) 0.0062 (7)
C7 0.0387 (8) 0.0389 (7) 0.0391 (7) −0.0033 (6) −0.0013 (6) 0.0022 (6)
C1 0.0336 (7) 0.0396 (7) 0.0323 (6) −0.0061 (6) −0.0033 (6) 0.0018 (5)
C8 0.0326 (7) 0.0390 (7) 0.0367 (7) −0.0043 (6) −0.0021 (6) −0.0033 (5)
C9 0.0443 (9) 0.0464 (8) 0.0372 (7) −0.0018 (7) 0.0001 (7) −0.0014 (6)
C10 0.0477 (9) 0.0531 (9) 0.0439 (8) 0.0007 (8) 0.0093 (7) −0.0072 (7)
C11 0.0368 (8) 0.0372 (7) 0.0528 (8) 0.0005 (7) 0.0023 (7) −0.0094 (6)
C14 0.0496 (11) 0.0653 (12) 0.0680 (12) 0.0174 (9) −0.0045 (9) −0.0032 (9)
C12 0.0391 (8) 0.0368 (7) 0.0439 (8) −0.0016 (7) −0.0050 (6) −0.0027 (6)
C13 0.0381 (8) 0.0429 (8) 0.0375 (7) −0.0013 (7) 0.0011 (6) −0.0020 (6)
N1 0.0378 (7) 0.0409 (6) 0.0334 (6) 0.0007 (5) −0.0006 (5) 0.0012 (5)
O1 0.0511 (8) 0.0612 (7) 0.0644 (8) 0.0187 (6) 0.0052 (6) −0.0041 (6)
O2 0.0511 (7) 0.0618 (7) 0.0549 (7) 0.0179 (6) −0.0032 (6) 0.0060 (5)
S1 0.0452 (3) 0.0662 (3) 0.0386 (2) 0.0075 (2) 0.00557 (17) 0.01540 (17)

Geometric parameters (Å, º)

C2—C3 1.392 (2) C8—C9 1.388 (2)
C2—N1 1.3926 (18) C8—C13 1.412 (2)
C2—C7 1.403 (2) C9—C10 1.388 (2)
C3—C4 1.374 (2) C9—H9 0.9300
C3—H3 0.9300 C10—C11 1.365 (2)
C4—C5 1.390 (3) C10—H10 0.9300
C4—H4 0.9300 C11—O1 1.3668 (19)
C5—C6 1.372 (3) C11—C12 1.383 (2)
C5—H5 0.9300 C14—O2 1.424 (2)
C6—C7 1.384 (2) C14—O1 1.428 (2)
C6—H6 0.9300 C14—H14A 0.9700
C7—S1 1.7243 (16) C14—H14B 0.9700
C1—N1 1.2991 (18) C12—C13 1.361 (2)
C1—C8 1.461 (2) C12—O2 1.3731 (18)
C1—S1 1.7517 (14) C13—H13 0.9300
C3—C2—N1 125.86 (13) C10—C9—H9 118.8
C3—C2—C7 118.93 (14) C8—C9—H9 118.8
N1—C2—C7 115.20 (13) C11—C10—C9 116.70 (14)
C4—C3—C2 118.99 (15) C11—C10—H10 121.7
C4—C3—H3 120.5 C9—C10—H10 121.7
C2—C3—H3 120.5 C10—C11—O1 127.88 (15)
C3—C4—C5 121.33 (16) C10—C11—C12 121.77 (15)
C3—C4—H4 119.3 O1—C11—C12 110.34 (14)
C5—C4—H4 119.3 O2—C14—O1 108.49 (14)
C6—C5—C4 120.75 (16) O2—C14—H14A 110.0
C6—C5—H5 119.6 O1—C14—H14A 110.0
C4—C5—H5 119.6 O2—C14—H14B 110.0
C5—C6—C7 118.21 (15) O1—C14—H14B 110.0
C5—C6—H6 120.9 H14A—C14—H14B 108.4
C7—C6—H6 120.9 C13—C12—O2 128.00 (14)
C6—C7—C2 121.78 (15) C13—C12—C11 122.54 (14)
C6—C7—S1 129.07 (12) O2—C12—C11 109.44 (13)
C2—C7—S1 109.16 (11) C12—C13—C8 116.84 (14)
N1—C1—C8 125.25 (13) C12—C13—H13 121.6
N1—C1—S1 115.30 (11) C8—C13—H13 121.6
C8—C1—S1 119.43 (10) C1—N1—C2 110.70 (12)
C9—C8—C13 119.81 (14) C11—O1—C14 105.23 (13)
C9—C8—C1 120.58 (13) C12—O2—C14 105.57 (13)
C13—C8—C1 119.60 (13) C7—S1—C1 89.62 (7)
C10—C9—C8 122.34 (14)
N1—C2—C3—C4 −178.02 (14) O1—C11—C12—C13 178.48 (13)
C7—C2—C3—C4 1.1 (2) C10—C11—C12—O2 −179.03 (14)
C2—C3—C4—C5 −1.0 (3) O1—C11—C12—O2 0.01 (18)
C3—C4—C5—C6 0.4 (3) O2—C12—C13—C8 178.89 (14)
C4—C5—C6—C7 0.2 (3) C11—C12—C13—C8 0.7 (2)
C5—C6—C7—C2 −0.1 (2) C9—C8—C13—C12 −0.3 (2)
C5—C6—C7—S1 179.51 (13) C1—C8—C13—C12 178.46 (13)
C3—C2—C7—C6 −0.5 (2) C8—C1—N1—C2 −178.07 (12)
N1—C2—C7—C6 178.66 (14) S1—C1—N1—C2 0.36 (15)
C3—C2—C7—S1 179.79 (12) C3—C2—N1—C1 179.57 (14)
N1—C2—C7—S1 −1.03 (16) C7—C2—N1—C1 0.45 (17)
N1—C1—C8—C9 −176.37 (14) C10—C11—O1—C14 −175.20 (17)
S1—C1—C8—C9 5.26 (19) C12—C11—O1—C14 5.84 (18)
N1—C1—C8—C13 4.9 (2) O2—C14—O1—C11 −9.44 (19)
S1—C1—C8—C13 −173.44 (11) C13—C12—O2—C14 175.75 (16)
C13—C8—C9—C10 −0.4 (2) C11—C12—O2—C14 −5.88 (18)
C1—C8—C9—C10 −179.06 (14) O1—C14—O2—C12 9.48 (19)
C8—C9—C10—C11 0.5 (2) C6—C7—S1—C1 −178.68 (15)
C9—C10—C11—O1 −178.94 (14) C2—C7—S1—C1 0.98 (11)
C9—C10—C11—C12 −0.1 (2) N1—C1—S1—C7 −0.81 (12)
C10—C11—C12—C13 −0.6 (2) C8—C1—S1—C7 177.71 (11)

Hydrogen-bond geometry (Å, º)

Cg1 is the centroid of the dioxole ring and Cg2 is the centroid of the C2–C7 benzene ring.

D—H···A D—H H···A D···A D—H···A
C5—H5···Cg1i 0.93 2.79 3.624 (2) 150
C14—H14B···Cg2ii 0.97 2.84 3.580 (2) 134

Symmetry codes: (i) x, −y−3/2, z−1/2; (ii) x−1, −y−1/2, z−1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: GK2459).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812008914/gk2459sup1.cif

e-68-0o961-sup1.cif (21.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812008914/gk2459Isup2.hkl

e-68-0o961-Isup2.hkl (150.8KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812008914/gk2459Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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