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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Mar 17;68(Pt 4):o1085. doi: 10.1107/S1600536812010574

(2E)-1-(2,6-Dichloro-3-fluoro­phen­yl)-3-phenyl­prop-2-en-1-one

Aletti S Praveen a, Hemmige S Yathirajan a, Badiadka Narayana b, Thomas Gerber c, Eric Hosten c, Richard Betz c,*
PMCID: PMC3344040  PMID: 22589949

Abstract

In the title compound, C15H9Cl2FO, the F atom shows positional disorder over two positions, with site-occupancy factors of 0.747 (4) and 0.253 (4). The dihedral angle between the rings is 86.37 (10)°. In the crystal, C—H⋯O contacts connect the mol­ecules into chains along the c axis. The shortest inter-centroid distance between two aromatic systems is 3.6686 (12) Å and is apparent between the halogenated rings.

Related literature  

For pharmaceutical background to chalcones, see: Lin et al. (2002); Modzelewska et al. (2006); Svetaz et al. (2004). For related structures, see: Betz et al. (2012). For graph-set analysis of hydrogen bonds, see: Etter et al. (1990); Bernstein et al. (1995).graphic file with name e-68-o1085-scheme1.jpg

Experimental  

Crystal data  

  • C15H9Cl2FO

  • M r = 295.12

  • Monoclinic, Inline graphic

  • a = 11.3390 (3) Å

  • b = 10.3896 (3) Å

  • c = 11.3930 (3) Å

  • β = 97.078 (1)°

  • V = 1331.95 (6) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.49 mm−1

  • T = 200 K

  • 0.49 × 0.34 × 0.17 mm

Data collection  

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2008) T min = 0.798, T max = 0.920

  • 23002 measured reflections

  • 3329 independent reflections

  • 2742 reflections with I > 2σ(I)

  • R int = 0.025

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.043

  • wR(F 2) = 0.111

  • S = 1.04

  • 3329 reflections

  • 182 parameters

  • H-atom parameters constrained

  • Δρmax = 0.58 e Å−3

  • Δρmin = −0.60 e Å−3

Data collection: APEX2 (Bruker, 2010); cell refinement: SAINT (Bruker, 2010); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812010574/hg5184sup1.cif

e-68-o1085-sup1.cif (21.7KB, cif)

Supplementary material file. DOI: 10.1107/S1600536812010574/hg5184Isup2.cdx

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812010574/hg5184Isup3.hkl

e-68-o1085-Isup3.hkl (163.3KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812010574/hg5184Isup4.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C1—H1⋯O1i 0.95 2.50 3.399 (2) 158
C16—H16⋯O1i 0.95 2.57 3.440 (2) 153

Symmetry code: (i) Inline graphic.

Acknowledgments

ASP thanks the University of Mysore for research facilities.

supplementary crystallographic information

Comment

Substituted chalcones and their derivatives have been reported to possess interesting biological properties such as being antitubercular (Lin et al., 2002), anticancer (Modzelewska et al., 2006) and antifungal agents (Svetaz et al., 2004). The crystal structures of some chalcones such as (2E)-1-(2,6-Dichloro-3-fluorophenyl)-3-(4-fluorophenyl)prop-2-en-1-one (Betz et al., 2012) have been reported in the literature. As part of our ongoing studies on chalcones, the title compound was synthesized and characterized by X-ray diffraction.

The fluorine atom on the halogenated phenyl ring shows rotational disorder over two positions with site occupancy factors of 0.75 and 0.25. The least-squares planes defined by the carbon atoms of the two aromatic moieties intersect at an angle of 86.37 (10)° (Fig. 1).

In the crystal, C–H···O contacts whose range falls by more than 0.1 Å below the sum of van-der-Waals radii of the respective atoms are present. These are supported by one of the vinylic hydrogen atoms and one of the hydrogen atoms of the unsubstituted phenyl ring. In terms of graph-set analysis (Etter et al., 1990; Bernstein et al., 1995), the descriptor for the hydrogen bonds is C11(5)C11(7) on the unary level. Metrical information about these contacts as well as their symmetry is summarized in Table 1. In total, the molecules are connected to chains along the crystallographic c axis. The shortest intercentroid distance between two aromtic systems was measured at 3.6686 (12) Å and is apparent between the halogenated phenyl rings (Fig. 2).

The packing of the title compound in the crystal structure is shown in Figure 3.

Experimental

To a stirred solution of 1-(2,6-dichloro-3-fluorophenyl)ethanone (1 g, 4.8 mmol) and benzaldehyde (0.51 g, 4.8 mmol) in ethanol (10 ml), powdered KOH (0.40 g 7.2 mmol) was added at 0 °C. The reaction mixture was stirred at room temperature for 2 h. After completion of the reaction, the mixture was pourred into ice cold water and subsequently acidified with 1.5 N HCl (pH ~3). The precipitated solid was filtered and dried to afford 1.2 g of the title compound as off-white solid in 86% yield. The single-crystal was grown from a mixture of toluene:acetone (v:v = 1:1) by slow evaporation at room temperature (m.p.: 385–388 K).

Refinement

Carbon-bound H atoms were placed in calculated positions (C—H 0.95 Å) and were included in the refinement in the riding model approximation, with U(H) set to 1.2Ueq(C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, with atom labels and anisotropic displacement ellipsoids (drawn at 50% probability level).

Fig. 2.

Fig. 2.

Intermolecular contacts, viewed along [1 0 0]. Symmetry operators: ix, -y + 1/2, z + 1/2; iix, -y + 1/2, z - 1/2.

Fig. 3.

Fig. 3.

Molecular packing of the title compound, viewed along [0 1 0] (anisotropic displacement ellipsoids drawn at 50% probability level).

Crystal data

C15H9Cl2FO F(000) = 600
Mr = 295.12 Dx = 1.472 Mg m3
Monoclinic, P21/c Melting point = 385–388 K
Hall symbol: -P 2ybc Mo Kα radiation, λ = 0.71073 Å
a = 11.3390 (3) Å Cell parameters from 9971 reflections
b = 10.3896 (3) Å θ = 2.7–28.3°
c = 11.3930 (3) Å µ = 0.49 mm1
β = 97.078 (1)° T = 200 K
V = 1331.95 (6) Å3 Block, colourless
Z = 4 0.49 × 0.34 × 0.17 mm

Data collection

Bruker APEXII CCD diffractometer 3329 independent reflections
Radiation source: fine-focus sealed tube 2742 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.025
φ and ω scans θmax = 28.4°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Bruker, 2008) h = −15→15
Tmin = 0.798, Tmax = 0.920 k = −13→13
23002 measured reflections l = −15→15

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.111 H-atom parameters constrained
S = 1.04 w = 1/[σ2(Fo2) + (0.040P)2 + 0.7737P] where P = (Fo2 + 2Fc2)/3
3329 reflections (Δ/σ)max = 0.001
182 parameters Δρmax = 0.58 e Å3
0 restraints Δρmin = −0.60 e Å3

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq Occ. (<1)
Cl1 0.83699 (6) 0.03537 (6) 0.06241 (5) 0.06914 (19)
Cl2 0.43775 (5) 0.32132 (6) −0.01452 (5) 0.07146 (19)
O1 0.67486 (13) 0.20446 (13) −0.16536 (10) 0.0526 (3)
C1 0.76748 (14) 0.40662 (15) 0.08071 (14) 0.0373 (3)
H1 0.7325 0.3570 0.1374 0.045*
C2 0.75116 (16) 0.36328 (16) −0.03056 (14) 0.0410 (4)
H2 0.7832 0.4114 −0.0901 0.049*
C3 0.68640 (16) 0.24564 (16) −0.06433 (13) 0.0399 (3)
C11 0.83272 (14) 0.52106 (15) 0.12542 (14) 0.0373 (3)
C12 0.89663 (17) 0.59959 (17) 0.05617 (17) 0.0486 (4)
H12 0.8986 0.5798 −0.0250 0.058*
C13 0.95691 (18) 0.70569 (19) 0.1055 (2) 0.0569 (5)
H13 1.0018 0.7574 0.0584 0.068*
C14 0.9526 (2) 0.7373 (2) 0.2222 (2) 0.0622 (6)
H14 0.9937 0.8112 0.2552 0.075*
C15 0.8889 (2) 0.6619 (2) 0.29125 (19) 0.0602 (5)
H15 0.8850 0.6843 0.3715 0.072*
C16 0.83055 (16) 0.55359 (17) 0.24359 (15) 0.0448 (4)
H16 0.7884 0.5007 0.2922 0.054*
C21 0.63217 (16) 0.17125 (15) 0.03024 (13) 0.0407 (4)
C22 0.69437 (18) 0.07128 (16) 0.09046 (15) 0.0467 (4)
C24 0.5310 (2) 0.0283 (2) 0.20019 (19) 0.0693 (7)
H24 0.4966 −0.0210 0.2574 0.083*
C26 0.51877 (18) 0.19772 (19) 0.05775 (16) 0.0492 (4)
C23A 0.6426 (2) 0.00145 (19) 0.17485 (17) 0.0618 (6) 0.747 (4)
C25A 0.4689 (2) 0.1274 (3) 0.14214 (19) 0.0665 (7) 0.747 (4)
H25A 0.3913 0.1478 0.1599 0.080* 0.747 (4)
F1A 0.7017 (2) −0.09064 (16) 0.23597 (15) 0.0758 (7) 0.747 (4)
C23B 0.6426 (2) 0.00145 (19) 0.17485 (17) 0.0618 (6) 0.25
H23B 0.6862 −0.0665 0.2157 0.074* 0.253 (4)
C25B 0.4689 (2) 0.1274 (3) 0.14214 (19) 0.0665 (7) 0.25
F2B 0.3774 (5) 0.1417 (8) 0.1629 (6) 0.099 (3) 0.253 (4)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Cl1 0.0789 (4) 0.0587 (3) 0.0676 (3) 0.0216 (3) −0.0001 (3) 0.0108 (2)
Cl2 0.0627 (3) 0.0829 (4) 0.0700 (4) 0.0201 (3) 0.0129 (3) 0.0075 (3)
O1 0.0774 (9) 0.0498 (7) 0.0311 (6) 0.0050 (6) 0.0081 (6) −0.0060 (5)
C1 0.0450 (8) 0.0320 (7) 0.0358 (7) 0.0024 (6) 0.0077 (6) 0.0041 (6)
C2 0.0523 (9) 0.0386 (8) 0.0327 (7) 0.0025 (7) 0.0077 (6) 0.0057 (6)
C3 0.0512 (9) 0.0373 (8) 0.0311 (7) 0.0084 (7) 0.0051 (6) 0.0000 (6)
C11 0.0393 (8) 0.0319 (7) 0.0403 (8) 0.0043 (6) 0.0031 (6) 0.0045 (6)
C12 0.0544 (10) 0.0406 (9) 0.0516 (10) 0.0008 (8) 0.0098 (8) 0.0096 (7)
C13 0.0501 (10) 0.0430 (9) 0.0763 (14) −0.0047 (8) 0.0025 (9) 0.0187 (9)
C14 0.0637 (12) 0.0423 (10) 0.0743 (14) −0.0108 (9) −0.0161 (10) 0.0041 (9)
C15 0.0760 (14) 0.0490 (11) 0.0522 (11) −0.0091 (10) −0.0054 (10) −0.0057 (9)
C16 0.0537 (10) 0.0392 (8) 0.0409 (8) −0.0021 (7) 0.0027 (7) 0.0004 (7)
C21 0.0568 (10) 0.0352 (8) 0.0291 (7) −0.0053 (7) 0.0009 (6) −0.0041 (6)
C22 0.0665 (11) 0.0360 (8) 0.0354 (8) −0.0068 (8) −0.0030 (7) −0.0018 (6)
C24 0.0934 (17) 0.0662 (14) 0.0480 (11) −0.0410 (13) 0.0068 (11) 0.0041 (10)
C26 0.0567 (10) 0.0520 (10) 0.0385 (8) −0.0074 (8) 0.0036 (7) −0.0054 (7)
C23A 0.0988 (18) 0.0423 (10) 0.0404 (10) −0.0211 (10) −0.0078 (10) 0.0058 (8)
C25A 0.0706 (15) 0.0780 (15) 0.0518 (11) −0.0294 (12) 0.0114 (10) −0.0063 (11)
F1A 0.1208 (17) 0.0477 (9) 0.0571 (10) 0.0024 (9) 0.0037 (10) 0.0182 (7)
C23B 0.0988 (18) 0.0423 (10) 0.0404 (10) −0.0211 (10) −0.0078 (10) 0.0058 (8)
C25B 0.0706 (15) 0.0780 (15) 0.0518 (11) −0.0294 (12) 0.0114 (10) −0.0063 (11)
F2B 0.066 (4) 0.136 (6) 0.103 (5) −0.033 (4) 0.045 (3) −0.012 (4)

Geometric parameters (Å, º)

Cl1—C22 1.727 (2) C14—C15 1.376 (3)
Cl2—C26 1.728 (2) C14—H14 0.9500
O1—C3 1.2198 (19) C15—C16 1.382 (3)
C1—C2 1.337 (2) C15—H15 0.9500
C1—C11 1.459 (2) C16—H16 0.9500
C1—H1 0.9500 C21—C26 1.388 (3)
C2—C3 1.453 (2) C21—C22 1.388 (2)
C2—H2 0.9500 C22—C23A 1.391 (3)
C3—C21 1.516 (2) C24—C23A 1.362 (4)
C11—C16 1.391 (2) C24—C25A 1.370 (4)
C11—C12 1.398 (2) C24—H24 0.9500
C12—C13 1.380 (3) C26—C25A 1.383 (3)
C12—H12 0.9500 C23A—F1A 1.317 (3)
C13—C14 1.377 (3) C25A—H25A 0.9500
C13—H13 0.9500
C2—C1—C11 127.65 (15) C16—C15—H15 120.0
C2—C1—H1 116.2 C15—C16—C11 120.87 (18)
C11—C1—H1 116.2 C15—C16—H16 119.6
C1—C2—C3 122.74 (15) C11—C16—H16 119.6
C1—C2—H2 118.6 C26—C21—C22 117.70 (16)
C3—C2—H2 118.6 C26—C21—C3 121.83 (15)
O1—C3—C2 122.47 (16) C22—C21—C3 120.45 (16)
O1—C3—C21 119.07 (15) C21—C22—C23A 120.0 (2)
C2—C3—C21 118.46 (13) C21—C22—Cl1 120.01 (14)
C16—C11—C12 118.46 (16) C23A—C22—Cl1 119.97 (16)
C16—C11—C1 117.86 (15) C23A—C24—C25A 119.2 (2)
C12—C11—C1 123.68 (15) C23A—C24—H24 120.4
C13—C12—C11 120.13 (18) C25A—C24—H24 120.4
C13—C12—H12 119.9 C25A—C26—C21 121.5 (2)
C11—C12—H12 119.9 C25A—C26—Cl2 119.02 (18)
C14—C13—C12 120.62 (19) C21—C26—Cl2 119.52 (14)
C14—C13—H13 119.7 F1A—C23A—C24 117.6 (2)
C12—C13—H13 119.7 F1A—C23A—C22 120.9 (2)
C15—C14—C13 119.97 (19) C24—C23A—C22 121.5 (2)
C15—C14—H14 120.0 C24—C25A—C26 120.2 (2)
C13—C14—H14 120.0 C24—C25A—H25A 119.9
C14—C15—C16 119.9 (2) C26—C25A—H25A 119.9
C14—C15—H15 120.0
C11—C1—C2—C3 178.53 (15) C26—C21—C22—C23A 0.1 (2)
C1—C2—C3—O1 −177.72 (17) C3—C21—C22—C23A −178.32 (15)
C1—C2—C3—C21 1.8 (2) C26—C21—C22—Cl1 −178.77 (13)
C2—C1—C11—C16 175.07 (17) C3—C21—C22—Cl1 2.8 (2)
C2—C1—C11—C12 −4.7 (3) C22—C21—C26—C25A 0.0 (3)
C16—C11—C12—C13 0.8 (3) C3—C21—C26—C25A 178.42 (17)
C1—C11—C12—C13 −179.44 (16) C22—C21—C26—Cl2 179.90 (12)
C11—C12—C13—C14 −1.6 (3) C3—C21—C26—Cl2 −1.7 (2)
C12—C13—C14—C15 0.8 (3) C25A—C24—C23A—F1A 177.08 (19)
C13—C14—C15—C16 0.8 (3) C25A—C24—C23A—C22 −0.8 (3)
C14—C15—C16—C11 −1.6 (3) C21—C22—C23A—F1A −177.52 (17)
C12—C11—C16—C15 0.8 (3) Cl1—C22—C23A—F1A 1.4 (3)
C1—C11—C16—C15 −178.99 (17) C21—C22—C23A—C24 0.3 (3)
O1—C3—C21—C26 −92.4 (2) Cl1—C22—C23A—C24 179.16 (16)
C2—C3—C21—C26 88.0 (2) C23A—C24—C25A—C26 0.9 (3)
O1—C3—C21—C22 85.9 (2) C21—C26—C25A—C24 −0.5 (3)
C2—C3—C21—C22 −93.60 (19) Cl2—C26—C25A—C24 179.59 (16)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C1—H1···O1i 0.95 2.50 3.399 (2) 158
C16—H16···O1i 0.95 2.57 3.440 (2) 153

Symmetry code: (i) x, −y+1/2, z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HG5184).

References

  1. Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573.
  2. Betz, R., Gerber, T., Hosten, E., Praveen, A. S., Yathirajan, H. S. & Narayana, B. (2012). Acta Cryst. E68, o512. [DOI] [PMC free article] [PubMed]
  3. Bruker (2008). SADABS Bruker Inc., Madison, Wisconsin, USA.
  4. Bruker (2010). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
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  8. Macrae, C. F., Bruno, I. J., Chisholm, J. A., Edgington, P. R., McCabe, P., Pidcock, E., Rodriguez-Monge, L., Taylor, R., van de Streek, J. & Wood, P. A. (2008). J. Appl. Cryst. 41, 466–470.
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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812010574/hg5184sup1.cif

e-68-o1085-sup1.cif (21.7KB, cif)

Supplementary material file. DOI: 10.1107/S1600536812010574/hg5184Isup2.cdx

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812010574/hg5184Isup3.hkl

e-68-o1085-Isup3.hkl (163.3KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812010574/hg5184Isup4.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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