Abstract
In the title compound, C13H14O4S, both C=C double bonds adopt an E conformation. In the crystal, molecules are linked into centrosymmetric R 2 2(14) dimers via pairs of C—H⋯O hydrogen bonds.
Related literature
For the biological activity of phenyl sulfonyl-containing compounds see: De-Benedetti et al. (1985 ▶). For a related structure, see: Li (2011 ▶).
Experimental
Crystal data
C13H14O4S
M r = 266.30
Triclinic,
a = 6.2525 (3) Å
b = 7.8889 (4) Å
c = 14.5049 (7) Å
α = 82.828 (3)°
β = 87.261 (2)°
γ = 72.426 (2)°
V = 676.69 (6) Å3
Z = 2
Mo Kα radiation
μ = 0.24 mm−1
T = 298 K
0.45 × 0.38 × 0.15 mm
Data collection
Bruker APEXII KappaCCD diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.899, T max = 0.965
8948 measured reflections
3084 independent reflections
2621 reflections with I > 2σ(I)
R int = 0.020
Refinement
R[F 2 > 2σ(F 2)] = 0.043
wR(F 2) = 0.147
S = 1.87
3084 reflections
164 parameters
H-atom parameters constrained
Δρmax = 0.29 e Å−3
Δρmin = −0.30 e Å−3
Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶).
Supplementary Material
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812009907/bt5831sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812009907/bt5831Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812009907/bt5831Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C7—H7⋯O3i | 0.93 | 2.32 | 3.212 (2) | 161 |
Symmetry code: (i)
.
Acknowledgments
SA thanks the UGC, India, for financial support.
supplementary crystallographic information
Comment
Phenyl sulfonyl containing compounds show a wide range of biological properties (De-Benedetti et al., 1985).
Fig. 1. shows a displacement ellipsoid plot of the title compound. Both C=C double bonds display an E configuration. The title molecule exhibits structural similarities with the already reported related structure (Li, 2011). The dihedral angle between two planes (C5—C6—S1—O1) and (C1—C6—S1—O2) is 37.32 (6)°. The crystal packing is stabilized by C—H···O intermolecular interactions. The molecules are linked into centrosymmetric R22(14) dimers via C7—H7···O3 hydrogen bonds (Table 1). The packing of the compound is shown in (Fig. 2).
Experimental
LIHMDS (8 ml, 8.4 mmol, 1.06 molar solution in THF) was added drop wise to a 0 °C cooled solution of bisphenyl sulfonyl methane (1 g, 3.4 mmol) in dried THF (15 ml) under argon atmosphere. The reaction mixture was stirred at same temp for 1 h, and then trans ethyl 4-bromo coronate (0.71 g, 3.7 mmol) in dry THF (5 ml) was added dropwise and the reaction mixture was allowed to come to RT and it was stirred under argon atmosphere for 16 h. The reaction mixture was quenched by adding saturated NH4Cl (20 ml) and then extracted with ethyl acetate (2x20 ml) and washed with water (2x20 ml) and sat brine (20 ml). Then, the organic layer was dried over MgSO4. Evaporation of the solvent under vacuum furnished the crude product, the residue was chromatographed (25% ethyl acetate in hexanes) to give analytically pure (2E, 4E)-ethyl 5-(phenyl sulfonyl)penta-2,4-dienote (0.673 g. yield 75%) as a colorless solid.
Refinement
Hydrogen atoms were placed in calculated positions with C–H ranging from 0.93 Å to 0.97Å and refined using a the riding model with fixed isotropic displacement parameters: Uiso(H) = 1.5 Ueq(C) for the methyl group and Uiso(H) = 1.2 Ueq(C) for other groups.
Figures
Fig. 1.
The molecular structure of the title compound with the atom numbering scheme. Displacement ellipsoids are shown at 30% probability level. The H atoms are presented as a small spheres of arbitrary radius. Related atoms have symmetry code: (i) -x + 2, -y, -z + 1.
Fig. 2.
A view of the crystal packing. H atoms not involved in hydrogen bonding(dashed lines)have been omitted for clarity.
Crystal data
| C13H14O4S | Z = 2 |
| Mr = 266.30 | F(000) = 280 |
| Triclinic, P1 | Dx = 1.307 Mg m−3 |
| a = 6.2525 (3) Å | Mo Kα radiation, λ = 0.71073 Å |
| b = 7.8889 (4) Å | Cell parameters from 5946 reflections |
| c = 14.5049 (7) Å | θ = 2.7–28.3° |
| α = 82.828 (3)° | µ = 0.24 mm−1 |
| β = 87.261 (2)° | T = 298 K |
| γ = 72.426 (2)° | Triclinic, colourless |
| V = 676.69 (6) Å3 | 0.45 × 0.38 × 0.15 mm |
Data collection
| Bruker APEXII KappaCCD diffractometer | 3084 independent reflections |
| Radiation source: fine-focus sealed tube | 2621 reflections with I > 2σ(I) |
| Graphite monochromator | Rint = 0.020 |
| Detector resolution: 15.9948 pixels mm-1 | θmax = 28.4°, θmin = 2.7° |
| ω and φ scans | h = −8→8 |
| Absorption correction: multi-scan (SADABS; Bruker, 2008) | k = −10→9 |
| Tmin = 0.899, Tmax = 0.965 | l = −19→19 |
| 8948 measured reflections |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.043 | H-atom parameters constrained |
| wR(F2) = 0.147 | w = 1/[σ2(Fo2) + (0.0551P)2] where P = (Fo2 + 2Fc2)/3 |
| S = 1.87 | (Δ/σ)max = 0.001 |
| 3084 reflections | Δρmax = 0.29 e Å−3 |
| 164 parameters | Δρmin = −0.30 e Å−3 |
| 0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008) |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0173 (18) |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | 1.5671 (3) | −0.0639 (2) | 0.13787 (12) | 0.0577 (4) | |
| H1 | 1.6549 | −0.0001 | 0.1586 | 0.069* | |
| C2 | 1.6638 (3) | −0.2359 (3) | 0.11608 (12) | 0.0670 (5) | |
| H2 | 1.8179 | −0.2881 | 0.1219 | 0.080* | |
| C3 | 1.5361 (3) | −0.3300 (2) | 0.08618 (12) | 0.0634 (5) | |
| H3 | 1.6035 | −0.4465 | 0.0726 | 0.076* | |
| C4 | 1.3103 (3) | −0.2555 (3) | 0.07586 (14) | 0.0714 (5) | |
| H4 | 1.2246 | −0.3206 | 0.0549 | 0.086* | |
| C5 | 1.2088 (3) | −0.0820 (2) | 0.09680 (12) | 0.0612 (4) | |
| H5 | 1.0550 | −0.0299 | 0.0895 | 0.073* | |
| C6 | 1.3387 (2) | 0.0124 (2) | 0.12854 (9) | 0.0446 (3) | |
| C7 | 1.0978 (3) | 0.1812 (2) | 0.27041 (10) | 0.0534 (4) | |
| H7 | 1.1952 | 0.1132 | 0.3169 | 0.064* | |
| C8 | 0.8815 (3) | 0.2378 (2) | 0.29034 (11) | 0.0545 (4) | |
| H8 | 0.7812 | 0.3023 | 0.2441 | 0.065* | |
| C9 | 0.7980 (3) | 0.2008 (2) | 0.38347 (11) | 0.0585 (4) | |
| H9 | 0.9013 | 0.1296 | 0.4271 | 0.070* | |
| C10 | 0.5861 (3) | 0.2604 (2) | 0.41125 (11) | 0.0603 (4) | |
| H10 | 0.4768 | 0.3307 | 0.3697 | 0.072* | |
| C11 | 0.5253 (3) | 0.2140 (3) | 0.50916 (12) | 0.0616 (4) | |
| C12 | 0.2457 (4) | 0.2713 (3) | 0.62613 (15) | 0.0902 (7) | |
| H12A | 0.2830 | 0.1440 | 0.6466 | 0.108* | |
| H12B | 0.3229 | 0.3242 | 0.6655 | 0.108* | |
| C13 | 0.0051 (4) | 0.3538 (4) | 0.63268 (17) | 0.1022 (8) | |
| H13A | −0.0313 | 0.4779 | 0.6084 | 0.153* | |
| H13B | −0.0420 | 0.3436 | 0.6966 | 0.153* | |
| H13C | −0.0704 | 0.2944 | 0.5974 | 0.153* | |
| O1 | 1.0292 (2) | 0.32081 (16) | 0.09966 (8) | 0.0719 (4) | |
| O2 | 1.3810 (2) | 0.30846 (17) | 0.17469 (9) | 0.0749 (4) | |
| O3 | 0.6500 (2) | 0.1095 (2) | 0.56403 (9) | 0.0889 (5) | |
| O4 | 0.3154 (2) | 0.3006 (2) | 0.52876 (8) | 0.0778 (4) | |
| S1 | 1.20983 (6) | 0.22766 (5) | 0.16117 (3) | 0.05254 (19) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0426 (8) | 0.0583 (10) | 0.0721 (10) | −0.0123 (7) | 0.0000 (7) | −0.0144 (8) |
| C2 | 0.0466 (9) | 0.0661 (12) | 0.0762 (11) | 0.0015 (8) | 0.0056 (8) | −0.0106 (9) |
| C3 | 0.0706 (11) | 0.0474 (9) | 0.0635 (9) | −0.0046 (8) | 0.0109 (8) | −0.0111 (7) |
| C4 | 0.0729 (12) | 0.0618 (12) | 0.0873 (12) | −0.0260 (10) | 0.0008 (10) | −0.0236 (10) |
| C5 | 0.0462 (8) | 0.0578 (10) | 0.0782 (11) | −0.0109 (8) | −0.0021 (8) | −0.0140 (8) |
| C6 | 0.0428 (7) | 0.0419 (8) | 0.0454 (7) | −0.0087 (6) | 0.0009 (6) | −0.0020 (6) |
| C7 | 0.0576 (9) | 0.0475 (9) | 0.0494 (8) | −0.0075 (7) | −0.0029 (7) | −0.0041 (6) |
| C8 | 0.0565 (9) | 0.0496 (9) | 0.0516 (8) | −0.0064 (7) | −0.0025 (7) | −0.0074 (7) |
| C9 | 0.0590 (10) | 0.0562 (10) | 0.0548 (9) | −0.0099 (8) | −0.0007 (7) | −0.0047 (7) |
| C10 | 0.0572 (10) | 0.0603 (11) | 0.0552 (9) | −0.0060 (8) | −0.0003 (7) | −0.0046 (8) |
| C11 | 0.0595 (10) | 0.0586 (11) | 0.0615 (10) | −0.0110 (8) | 0.0010 (8) | −0.0047 (8) |
| C12 | 0.0948 (15) | 0.0925 (16) | 0.0674 (11) | −0.0119 (13) | 0.0204 (11) | 0.0019 (11) |
| C13 | 0.0908 (16) | 0.122 (2) | 0.0886 (15) | −0.0233 (15) | 0.0273 (13) | −0.0240 (15) |
| O1 | 0.0726 (8) | 0.0597 (8) | 0.0600 (7) | 0.0108 (6) | −0.0020 (6) | 0.0051 (5) |
| O2 | 0.0824 (9) | 0.0565 (8) | 0.0942 (9) | −0.0331 (7) | 0.0119 (7) | −0.0141 (7) |
| O3 | 0.0740 (9) | 0.1009 (12) | 0.0691 (8) | −0.0048 (8) | −0.0020 (7) | 0.0225 (7) |
| O4 | 0.0705 (8) | 0.0792 (10) | 0.0640 (7) | 0.0013 (7) | 0.0155 (6) | 0.0001 (7) |
| S1 | 0.0557 (3) | 0.0399 (3) | 0.0553 (3) | −0.00635 (19) | 0.00194 (18) | −0.00117 (17) |
Geometric parameters (Å, º)
| C1—C2 | 1.378 (2) | C8—H8 | 0.9300 |
| C1—C6 | 1.378 (2) | C9—C10 | 1.326 (2) |
| C1—H1 | 0.9300 | C9—H9 | 0.9300 |
| C2—C3 | 1.359 (2) | C10—C11 | 1.483 (2) |
| C2—H2 | 0.9300 | C10—H10 | 0.9300 |
| C3—C4 | 1.363 (3) | C11—O3 | 1.195 (2) |
| C3—H3 | 0.9300 | C11—O4 | 1.319 (2) |
| C4—C5 | 1.389 (3) | C12—C13 | 1.451 (3) |
| C4—H4 | 0.9300 | C12—O4 | 1.469 (2) |
| C5—C6 | 1.383 (2) | C12—H12A | 0.9700 |
| C5—H5 | 0.9300 | C12—H12B | 0.9700 |
| C6—S1 | 1.7595 (15) | C13—H13A | 0.9600 |
| C7—C8 | 1.320 (2) | C13—H13B | 0.9600 |
| C7—S1 | 1.7434 (15) | C13—H13C | 0.9600 |
| C7—H7 | 0.9300 | O1—S1 | 1.4294 (12) |
| C8—C9 | 1.452 (2) | O2—S1 | 1.4328 (13) |
| C2—C1—C6 | 119.12 (15) | C8—C9—H9 | 117.4 |
| C2—C1—H1 | 120.4 | C9—C10—C11 | 119.36 (17) |
| C6—C1—H1 | 120.4 | C9—C10—H10 | 120.3 |
| C3—C2—C1 | 120.67 (15) | C11—C10—H10 | 120.3 |
| C3—C2—H2 | 119.7 | O3—C11—O4 | 123.62 (16) |
| C1—C2—H2 | 119.7 | O3—C11—C10 | 124.36 (17) |
| C2—C3—C4 | 120.76 (17) | O4—C11—C10 | 112.01 (15) |
| C2—C3—H3 | 119.6 | C13—C12—O4 | 108.24 (19) |
| C4—C3—H3 | 119.6 | C13—C12—H12A | 110.1 |
| C3—C4—C5 | 119.78 (17) | O4—C12—H12A | 110.1 |
| C3—C4—H4 | 120.1 | C13—C12—H12B | 110.1 |
| C5—C4—H4 | 120.1 | O4—C12—H12B | 110.1 |
| C6—C5—C4 | 119.32 (16) | H12A—C12—H12B | 108.4 |
| C6—C5—H5 | 120.3 | C12—C13—H13A | 109.5 |
| C4—C5—H5 | 120.3 | C12—C13—H13B | 109.5 |
| C1—C6—C5 | 120.34 (15) | H13A—C13—H13B | 109.5 |
| C1—C6—S1 | 119.90 (12) | C12—C13—H13C | 109.5 |
| C5—C6—S1 | 119.71 (11) | H13A—C13—H13C | 109.5 |
| C8—C7—S1 | 123.19 (13) | H13B—C13—H13C | 109.5 |
| C8—C7—H7 | 118.4 | C11—O4—C12 | 115.52 (15) |
| S1—C7—H7 | 118.4 | O1—S1—O2 | 119.36 (8) |
| C7—C8—C9 | 120.95 (15) | O1—S1—C7 | 108.53 (8) |
| C7—C8—H8 | 119.5 | O2—S1—C7 | 107.09 (8) |
| C9—C8—H8 | 119.5 | O1—S1—C6 | 109.53 (7) |
| C10—C9—C8 | 125.22 (16) | O2—S1—C6 | 108.57 (7) |
| C10—C9—H9 | 117.4 | C7—S1—C6 | 102.40 (7) |
| C6—C1—C2—C3 | −0.3 (3) | O3—C11—O4—C12 | 4.5 (3) |
| C1—C2—C3—C4 | 0.9 (3) | C10—C11—O4—C12 | −176.12 (16) |
| C2—C3—C4—C5 | −0.5 (3) | C13—C12—O4—C11 | −171.7 (2) |
| C3—C4—C5—C6 | −0.4 (3) | C8—C7—S1—O1 | −4.46 (18) |
| C2—C1—C6—C5 | −0.7 (2) | C8—C7—S1—O2 | 125.64 (16) |
| C2—C1—C6—S1 | 176.98 (12) | C8—C7—S1—C6 | −120.23 (16) |
| C4—C5—C6—C1 | 1.0 (2) | C1—C6—S1—O1 | 144.75 (14) |
| C4—C5—C6—S1 | −176.61 (14) | C5—C6—S1—O1 | −37.59 (14) |
| S1—C7—C8—C9 | −177.71 (12) | C1—C6—S1—O2 | 12.83 (15) |
| C7—C8—C9—C10 | 176.02 (18) | C5—C6—S1—O2 | −169.51 (12) |
| C8—C9—C10—C11 | −179.12 (15) | C1—C6—S1—C7 | −100.21 (14) |
| C9—C10—C11—O3 | −8.3 (3) | C5—C6—S1—C7 | 77.46 (14) |
| C9—C10—C11—O4 | 172.26 (17) |
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C7—H7···O3i | 0.93 | 2.32 | 3.212 (2) | 161 |
Symmetry code: (i) −x+2, −y, −z+1.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BT5831).
References
- Bruker (2008). APEX2, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA
- De-Benedetti, P. G., Folli, U., Iarossi, D. & Frassineti, C. (1985). J. Chem. Soc. Perkin Trans. 2, pp. 1527–1532.
- Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
- Li, X.-L. (2011). Acta Cryst. E67, o2622. [DOI] [PMC free article] [PubMed]
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812009907/bt5831sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812009907/bt5831Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812009907/bt5831Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


