Abstract
In the title compound, C13H12O2, the dihedral angle between the pyranone and phenyl rings is 57.55 (9)°. In the crystal, the molecules are linked by π–π stacking interactions between the parallel pyranone rings of neighboring molecules with distances of 3.5778 (11) Å and 3.3871 (11) Å between the planes. C—H⋯O interactions also occur.
Related literature
For the bioactivity of 2H-pyran-2-ones, see: Puerta et al. (2005 ▶); Thaisrivongs et al. (1998 ▶); Appendino et al. (2007 ▶). For research on functionalized allenes, see: Fan et al. (2011 ▶); Zhang et al. (2011 ▶); Xu et al. (2012 ▶).
Experimental
Crystal data
C13H12O2
M r = 200.23
Monoclinic,
a = 7.654 (3) Å
b = 6.967 (3) Å
c = 20.629 (8) Å
β = 97.183 (4)°
V = 1091.4 (7) Å3
Z = 4
Mo Kα radiation
μ = 0.08 mm−1
T = 296 K
0.39 × 0.37 × 0.28 mm
Data collection
Bruker SMART CCD area detector diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.969, T max = 0.978
7794 measured reflections
2032 independent reflections
1530 reflections with I > 2σ(I)
R int = 0.021
Refinement
R[F 2 > 2σ(F 2)] = 0.045
wR(F 2) = 0.137
S = 1.04
2032 reflections
138 parameters
H-atom parameters constrained
Δρmax = 0.18 e Å−3
Δρmin = −0.15 e Å−3
Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536812011233/vm2163sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812011233/vm2163Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812011233/vm2163Isup3.cdx
Supplementary material file. DOI: 10.1107/S1600536812011233/vm2163Isup4.cdx
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C8—H8⋯O2i | 0.93 | 2.53 | 3.384 (2) | 152 |
| C13—H13A⋯O2ii | 0.96 | 2.47 | 3.372 (3) | 156 |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
This work was supported by the National Natural Science Foundation of China (No. 21172057).
supplementary crystallographic information
Comment
2H-Pyran-2-one derivatives are highly desirable synthetic targets since they are known to have antimicrobial, antineoplastic, and anti-HIV effects (Puerta et al., 2005; Thaisrivongs et al., 1998; Appendino et al., 2007). During our search for new synthetic methodologies by taking the advantages of the versatile reactivity of functionalized allenes (Fan et al., 2011; Zhang et al., 2011), we developed a novel protocol for the preparation of 2H-pyran-2-ones through an acid-catalyzed domino reaction of 3-hydroxyhexa-4,5-dienoates (Xu et al., 2012). Herein, we would like to report the structure of one of the products we obtained.
In the title compound (Fig. 1), all the bond lengths and bond angles are within normal ranges. All the atoms connected with the pyranone ring are in the pyranone plane with a maximal deviation of 0.052 (2) Å for substituent C12. The dihedral angle between the pyranone ring and the phenyl ring is 57.55 (9)°.
In the crystal structure, the molecules are connected via intermolecular C—H···O hydrogen bonds (Table 1, Fig. 2). The neighboring O1B-pyranone ring, O1D-pyranone ring, O1A-pyranone ring and O1C-pyranone ring [symmetry code: (B) 1 + x, y, z; (C) -x, 1 - y, 1 - z; (D) 1 - x, 1 - y, 1 - z] are parallel with the distance between the O1D ring and O1A ring being 3.5778 (11) Å and the distance between the O1A ring and O1C ring being 3.3871 (11) Å. The short face-to-face separation clearly indicates the existence of π-π stacking between the pyranone rings.
Experimental
To a flask containing methyl 3-hydroxy-4-methyl-3-phenylhexa-4,5-dienoate (1 mmol) were added CH2Cl2 (5 ml) and conc. H2SO4 (0.1 mmol). The solution was stirred at room temperature until completion as monitored by TLC. The reaction was quenched with aqueous NaHCO3, and then extracted with ethyl acetate (5 ml × 3). The combined organic phases were dried, filtered and concentrated under vacuum. The residue was purified by column chromatography on silica gel eluenting with petroleum ether-ethyl acetate (10:1 v/v) to give the title compound as colorless solids with a yield of 90%. Single crystals, suitable for X-ray diffraction analysis, were obtained by slow evaporation of solvent from a petroleum ether-dichloromethane (3:1 v/v) solution.
Refinement
The H atoms were included at calculated positions and were refined as riding atoms: C—H = 0.93 and 0.96 Å for aromatic and methyl H atoms, respectively, with Uiso(H) =x×Ueq (C), where x = 1.5 for methyl H, and x = 1.2 for aromatic H atoms.
Figures
Fig. 1.
Molecular structure of the title compound, with displacement ellipsoids drawn at the 30% probability level.
Fig. 2.
Crystal packing of the title compound, viewed along the b axis. Intermolecular C—H···O hydrogen bonds are shown as dashed lines, only H atoms involved in hydrogen bonds are shown. π-π stacking interactions between the parallel pyranone rings of neighboring molecules are observed.
Crystal data
| C13H12O2 | F(000) = 424 |
| Mr = 200.23 | Dx = 1.219 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 2249 reflections |
| a = 7.654 (3) Å | θ = 2.7–25.9° |
| b = 6.967 (3) Å | µ = 0.08 mm−1 |
| c = 20.629 (8) Å | T = 296 K |
| β = 97.183 (4)° | Block, colourless |
| V = 1091.4 (7) Å3 | 0.39 × 0.37 × 0.28 mm |
| Z = 4 |
Data collection
| Bruker SMART CCD area detector diffractometer | 2032 independent reflections |
| Radiation source: fine-focus sealed tube | 1530 reflections with I > 2σ(I) |
| Graphite monochromator | Rint = 0.021 |
| phi and ω scans | θmax = 25.5°, θmin = 2.7° |
| Absorption correction: multi-scan (SADABS; Bruker, 2007) | h = −9→9 |
| Tmin = 0.969, Tmax = 0.978 | k = −8→8 |
| 7794 measured reflections | l = −24→24 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.045 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.137 | H-atom parameters constrained |
| S = 1.04 | w = 1/[σ2(Fo2) + (0.0659P)2 + 0.2202P] where P = (Fo2 + 2Fc2)/3 |
| 2032 reflections | (Δ/σ)max = 0.001 |
| 138 parameters | Δρmax = 0.18 e Å−3 |
| 0 restraints | Δρmin = −0.15 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)are estimated using the full covariance matrix. The cell e.s.d.'s are takeninto account individually in the estimation of e.s.d.'s in distances, anglesand torsion angles; correlations between e.s.d.'s in cell parameters are onlyused when they are defined by crystal symmetry. An approximate (isotropic)treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR andgoodness of fit S are based on F2, conventional R-factors R are basedon F, with F set to zero for negative F2. The threshold expression ofF2 > σ(F2) is used only for calculating R-factors(gt) etc. and isnot relevant to the choice of reflections for refinement. R-factors basedon F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | 0.2300 (2) | 0.4016 (3) | 0.64903 (8) | 0.0547 (4) | |
| C2 | 0.1478 (3) | 0.5353 (3) | 0.68457 (9) | 0.0749 (6) | |
| H2 | 0.0883 | 0.6385 | 0.6634 | 0.090* | |
| C3 | 0.1541 (3) | 0.5154 (4) | 0.75160 (10) | 0.0907 (8) | |
| H3 | 0.0979 | 0.6049 | 0.7753 | 0.109* | |
| C4 | 0.2425 (3) | 0.3647 (4) | 0.78333 (10) | 0.0894 (7) | |
| H4 | 0.2464 | 0.3523 | 0.8284 | 0.107* | |
| C5 | 0.3249 (3) | 0.2329 (4) | 0.74867 (10) | 0.0831 (7) | |
| H5 | 0.3861 | 0.1315 | 0.7703 | 0.100* | |
| C6 | 0.3180 (3) | 0.2493 (3) | 0.68175 (9) | 0.0651 (5) | |
| H6 | 0.3727 | 0.1575 | 0.6585 | 0.078* | |
| C7 | 0.1397 (2) | 0.2616 (2) | 0.47092 (8) | 0.0506 (4) | |
| C8 | 0.1532 (2) | 0.2625 (2) | 0.54020 (8) | 0.0508 (4) | |
| H8 | 0.1145 | 0.1558 | 0.5615 | 0.061* | |
| C9 | 0.22072 (19) | 0.4138 (2) | 0.57639 (7) | 0.0483 (4) | |
| C10 | 0.2838 (2) | 0.5790 (2) | 0.54428 (8) | 0.0520 (4) | |
| C11 | 0.2706 (2) | 0.5760 (2) | 0.47847 (9) | 0.0553 (4) | |
| C12 | 0.3667 (3) | 0.7471 (3) | 0.58167 (11) | 0.0771 (6) | |
| H12A | 0.4441 | 0.8121 | 0.5558 | 0.116* | |
| H12B | 0.4326 | 0.7029 | 0.6215 | 0.116* | |
| H12C | 0.2764 | 0.8339 | 0.5917 | 0.116* | |
| C13 | 0.3217 (3) | 0.7292 (3) | 0.43413 (11) | 0.0775 (6) | |
| H13A | 0.2281 | 0.8212 | 0.4264 | 0.116* | |
| H13B | 0.3434 | 0.6731 | 0.3934 | 0.116* | |
| H13C | 0.4265 | 0.7920 | 0.4540 | 0.116* | |
| O1 | 0.20108 (14) | 0.42248 (16) | 0.44270 (5) | 0.0546 (3) | |
| O2 | 0.08210 (18) | 0.13534 (19) | 0.43387 (6) | 0.0699 (4) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0496 (9) | 0.0703 (11) | 0.0427 (9) | 0.0008 (8) | 0.0004 (7) | −0.0027 (8) |
| C2 | 0.0710 (12) | 0.0994 (15) | 0.0514 (10) | 0.0218 (11) | −0.0034 (9) | −0.0120 (10) |
| C3 | 0.0787 (14) | 0.141 (2) | 0.0513 (11) | 0.0202 (14) | 0.0051 (10) | −0.0242 (13) |
| C4 | 0.0815 (14) | 0.143 (2) | 0.0420 (10) | −0.0013 (15) | 0.0022 (10) | 0.0023 (13) |
| C5 | 0.0916 (15) | 0.1017 (17) | 0.0535 (12) | 0.0055 (13) | −0.0009 (11) | 0.0162 (11) |
| C6 | 0.0736 (12) | 0.0735 (12) | 0.0476 (10) | 0.0039 (9) | 0.0052 (8) | 0.0042 (9) |
| C7 | 0.0523 (9) | 0.0550 (10) | 0.0451 (9) | 0.0090 (7) | 0.0079 (7) | 0.0006 (8) |
| C8 | 0.0529 (9) | 0.0560 (10) | 0.0439 (9) | 0.0036 (7) | 0.0078 (7) | 0.0037 (7) |
| C9 | 0.0434 (8) | 0.0565 (9) | 0.0443 (9) | 0.0069 (7) | 0.0020 (6) | 0.0004 (7) |
| C10 | 0.0449 (9) | 0.0502 (9) | 0.0600 (10) | 0.0062 (7) | 0.0025 (7) | 0.0014 (8) |
| C11 | 0.0469 (9) | 0.0566 (10) | 0.0640 (11) | 0.0104 (8) | 0.0129 (8) | 0.0110 (8) |
| C12 | 0.0726 (13) | 0.0640 (12) | 0.0910 (15) | −0.0060 (10) | −0.0045 (11) | −0.0075 (10) |
| C13 | 0.0767 (13) | 0.0691 (12) | 0.0903 (15) | 0.0091 (10) | 0.0243 (11) | 0.0282 (11) |
| O1 | 0.0615 (7) | 0.0583 (7) | 0.0452 (6) | 0.0088 (6) | 0.0109 (5) | 0.0054 (5) |
| O2 | 0.0899 (10) | 0.0664 (8) | 0.0532 (7) | −0.0013 (7) | 0.0083 (7) | −0.0133 (6) |
Geometric parameters (Å, º)
| C1—C2 | 1.384 (3) | C7—C8 | 1.420 (2) |
| C1—C6 | 1.387 (2) | C8—C9 | 1.356 (2) |
| C1—C9 | 1.494 (2) | C8—H8 | 0.9300 |
| C2—C3 | 1.384 (3) | C9—C10 | 1.440 (2) |
| C2—H2 | 0.9300 | C10—C11 | 1.349 (2) |
| C3—C4 | 1.370 (3) | C10—C12 | 1.499 (2) |
| C3—H3 | 0.9300 | C11—O1 | 1.369 (2) |
| C4—C5 | 1.366 (3) | C11—C13 | 1.489 (2) |
| C4—H4 | 0.9300 | C12—H12A | 0.9600 |
| C5—C6 | 1.380 (3) | C12—H12B | 0.9600 |
| C5—H5 | 0.9300 | C12—H12C | 0.9600 |
| C6—H6 | 0.9300 | C13—H13A | 0.9600 |
| C7—O2 | 1.212 (2) | C13—H13B | 0.9600 |
| C7—O1 | 1.373 (2) | C13—H13C | 0.9600 |
| C2—C1—C6 | 118.86 (16) | C7—C8—H8 | 118.9 |
| C2—C1—C9 | 121.69 (16) | C8—C9—C10 | 119.63 (15) |
| C6—C1—C9 | 119.41 (15) | C8—C9—C1 | 118.35 (15) |
| C1—C2—C3 | 120.0 (2) | C10—C9—C1 | 122.01 (15) |
| C1—C2—H2 | 120.0 | C11—C10—C9 | 117.62 (15) |
| C3—C2—H2 | 120.0 | C11—C10—C12 | 120.21 (17) |
| C4—C3—C2 | 120.5 (2) | C9—C10—C12 | 122.14 (16) |
| C4—C3—H3 | 119.7 | C10—C11—O1 | 121.97 (15) |
| C2—C3—H3 | 119.7 | C10—C11—C13 | 127.95 (18) |
| C5—C4—C3 | 119.86 (19) | O1—C11—C13 | 110.07 (16) |
| C5—C4—H4 | 120.1 | C10—C12—H12A | 109.5 |
| C3—C4—H4 | 120.1 | C10—C12—H12B | 109.5 |
| C4—C5—C6 | 120.4 (2) | H12A—C12—H12B | 109.5 |
| C4—C5—H5 | 119.8 | C10—C12—H12C | 109.5 |
| C6—C5—H5 | 119.8 | H12A—C12—H12C | 109.5 |
| C5—C6—C1 | 120.39 (19) | H12B—C12—H12C | 109.5 |
| C5—C6—H6 | 119.8 | C11—C13—H13A | 109.5 |
| C1—C6—H6 | 119.8 | C11—C13—H13B | 109.5 |
| O2—C7—O1 | 116.24 (15) | H13A—C13—H13B | 109.5 |
| O2—C7—C8 | 127.79 (16) | C11—C13—H13C | 109.5 |
| O1—C7—C8 | 115.97 (14) | H13A—C13—H13C | 109.5 |
| C9—C8—C7 | 122.13 (15) | H13B—C13—H13C | 109.5 |
| C9—C8—H8 | 118.9 | C11—O1—C7 | 122.68 (13) |
| C6—C1—C2—C3 | −0.1 (3) | C2—C1—C9—C10 | 59.0 (2) |
| C9—C1—C2—C3 | 177.71 (19) | C6—C1—C9—C10 | −123.23 (18) |
| C1—C2—C3—C4 | 0.5 (4) | C8—C9—C10—C11 | 0.7 (2) |
| C2—C3—C4—C5 | −0.1 (4) | C1—C9—C10—C11 | 179.62 (14) |
| C3—C4—C5—C6 | −0.7 (4) | C8—C9—C10—C12 | −177.38 (15) |
| C4—C5—C6—C1 | 1.2 (3) | C1—C9—C10—C12 | 1.5 (2) |
| C2—C1—C6—C5 | −0.8 (3) | C9—C10—C11—O1 | −0.3 (2) |
| C9—C1—C6—C5 | −178.59 (17) | C12—C10—C11—O1 | 177.82 (15) |
| O2—C7—C8—C9 | 179.99 (16) | C9—C10—C11—C13 | 178.38 (16) |
| O1—C7—C8—C9 | 0.7 (2) | C12—C10—C11—C13 | −3.5 (3) |
| C7—C8—C9—C10 | −1.0 (2) | C10—C11—O1—C7 | 0.1 (2) |
| C7—C8—C9—C1 | −179.88 (14) | C13—C11—O1—C7 | −178.77 (14) |
| C2—C1—C9—C8 | −122.10 (19) | O2—C7—O1—C11 | −179.66 (14) |
| C6—C1—C9—C8 | 55.7 (2) | C8—C7—O1—C11 | −0.3 (2) |
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C8—H8···O2i | 0.93 | 2.53 | 3.384 (2) | 152 |
| C13—H13A···O2ii | 0.96 | 2.47 | 3.372 (3) | 156 |
Symmetry codes: (i) −x, −y, −z+1; (ii) x, y+1, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: VM2163).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536812011233/vm2163sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812011233/vm2163Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812011233/vm2163Isup3.cdx
Supplementary material file. DOI: 10.1107/S1600536812011233/vm2163Isup4.cdx
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


