Skip to main content
Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Mar 21;68(Pt 4):o1138–o1139. doi: 10.1107/S1600536812011440

(2S,3R)-tert-Butyl N-[4-(N-benzyl-4-fluoro­benzene­sulfonamido)-3-hy­droxy-1-phenyl­butan-2-yl]carbamate

Marcele Moreth a, Marcus VN de Souza a, James L Wardell b,, Solange M S V Wardell c, Edward R T Tiekink d,*
PMCID: PMC3344084  PMID: 22606087

Abstract

In the title mol­ecule, C28H33FN2O5S, the mean plane about the tertiary amine group (sum of the angles subtended at the sp 2-hybridized N atom = 359.7°) forms a dihedral angle of 16.66 (6)° with the phenyl ring adjacent to the carbamate group. The sulfonamide benzene ring and the hy­droxy group lie to either side of the C2NS plane, whereas the benzyl­phenyl (connected to the N atom) and carbamate substituents lie to the other side. Supra­molecular layers propagating in the ac plane are found in the crystal, linked by hy­droxy–sulfonamide O—H⋯O and carbamate–carbamate N—H⋯O hydrogen bonds along with C—H⋯O and C—H⋯π inter­actions.

Related literature  

For background to tuberculosis (TB) infection, see: de Souza (2006). For the development of β-amino­alcohols for the treatment of patients co-infected with TB and HIV, see: Yendapally & Lee (2008); Ferreira et al. (2009); Cunico et al. (2008, 2011); Gomes et al. (2011).graphic file with name e-68-o1138-scheme1.jpg

Experimental  

Crystal data  

  • C28H33FN2O5S

  • M r = 528.62

  • Monoclinic, Inline graphic

  • a = 5.4116 (1) Å

  • b = 25.5513 (8) Å

  • c = 9.8615 (3) Å

  • β = 101.641 (2)°

  • V = 1335.54 (6) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.17 mm−1

  • T = 120 K

  • 0.50 × 0.24 × 0.18 mm

Data collection  

  • Bruker–Nonius Roper CCD camera on a κ-goniostat diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 2007) T min = 0.654, T max = 0.746

  • 12832 measured reflections

  • 5956 independent reflections

  • 5075 reflections with I > 2σ(I)

  • R int = 0.040

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.042

  • wR(F 2) = 0.103

  • S = 1.01

  • 5956 reflections

  • 343 parameters

  • 3 restraints

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.21 e Å−3

  • Δρmin = −0.33 e Å−3

  • Absolute structure: Flack (1983), 2848 Friedel pairs

  • Flack parameter: 0.06 (6)

Data collection: COLLECT (Hooft, 1998); cell refinement: DENZO (Otwinowski & Minor, 1997) and COLLECT; data reduction: DENZO and COLLECT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812011440/hb6679sup1.cif

e-68-o1138-sup1.cif (25.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812011440/hb6679Isup2.hkl

e-68-o1138-Isup2.hkl (285.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812011440/hb6679Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg1 is the centroid of the C23–C28 ring.

D—H⋯A D—H H⋯A DA D—H⋯A
N2—H2n⋯O4i 0.88 (2) 2.36 (2) 3.179 (2) 154 (2)
O3—H3o⋯O2i 0.84 (2) 2.08 (2) 2.904 (2) 166 (3)
C7—H7A⋯O2i 0.99 2.56 3.405 (3) 143
C22—H22A⋯O4i 0.99 2.57 3.358 (2) 137
C20—H20CCg1ii 0.98 2.78 3.719 (2) 160

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The use of the EPSRC X-ray crystallographic service at the University of Southampton, England, and the valuable assistance of the staff there is gratefully acknowledged. JLW acknowledges support from CAPES (Brazil). Support from the Ministry of Higher Education, Malaysia, High-Impact Research scheme (UM.C/HIR/MOHE/SC/12) is gratefully acknowledged.

supplementary crystallographic information

Comment

Tuberculosis, TB, once again is becoming a worldwide problem due mainly to the increase in numbers of people infected with the HIV virus (de Souza, 2006). In 2010, there were 1.1 million new cases of TB among people living with HIV. Of the 1.8 million HIV-related deaths in 2010, 350,000 were due to TB (www.who.int/hiv/topics/tb/hiv_tb_factsheet_june_2011). Beta-aminoalcohols are actively being considered as a promising class of compounds in the combat of co-infection by TB and HIV, due to its versatility and significant application in anti-TB and anti-HIV treatment (Yendapally et al., 2008; Ferreira et al., 2009; Cunico et al., 2008; Cunico et al., 2011; Gomes et al., 2011). We now wish to report the structure of the title compound, 3, prepared as shown in Fig. 1.

Compound 3, Fig. 2, the tertiary amine is sp2 hybridized as evidenced by the sum of the angles subtended at the N1 atom of 359.7°. The sulfonamide-benzene and benzyl-phenyl rings connected to the N1 atom are almost orthogonal to each other, with the dihedral angle between them being 73.86 (11)°, and lie to either side of the C2NS plane. The hydroxy group is orientated to the same side of the molecule as the sulfonamide-benzene ring, and the carbamate group to the same side as the benzyl-phenyl ring. The dihedral angle between the carbamate group and adjacent phenyl ring is 66.35 (8)°, with the latter approximately parallel with the C2NS plane, forming a dihedral angle of 16.66 (6)°.

In the crystal packing, the hydroxy group forms a hydrogen bond with a sulfonamide-O atom, and the carbamate-N—H and O atoms self-associate, Table 1. These interactions are reinforced by C—H···O and C—H···π interactions, Table 1, to form a supramolecular layer in the ac plane, Fig. 3. Layers stack along the b axis with no specific intermolecular interactions between them, Fig. 4.

Experimental

A solution of (2S,3S)-boc-phenylalanine epoxide, 1, (1.6 mmol) and benzylamine (1.5 mmol) in i-PrOH (10 ml) was refluxed for 16 h. The reaction mixture was rotary evaporated and the crude product, 2, was crystallized from aqueous MeOH. To a solution of 2 in CH2Cl2 (10 ml) was successively added trifluoroacetic acid (2.2 mmol) and DMF (0.2 mmol). The mixture was stirred for 30 min under nitrogen, 4-fluorobenzenesulfonyl chloride (2.0 mmol) was added portion wise, After stirring for 8 h, the reaction mixture was washed with 5% HCl aqueous solution, water, brine, dried over MgSO4 and rotary evaporated to give the title compound, 3, which was recrystallized from EtOH to provide colourless blocks, M.pt: 418–420 K.

1H NMR δ: 7.92–7.88 (m, 2H, Ph); 7.43–7.38 (m, 2H, Ph); 7.32–7.25 (m, 5H, Ph); 7.23–7.19 (m, 2H, Ph); 7.15–7.11 (m, 3H, Ph); 6.60 (d, 1H, JH,H = 8.8, NH); 4.97 (d, 1H, JH,H = 6.0, OH); 4.57 (d, 1H, JH,H = 15.6; H5a); 4,41 (d, 1H, JH,H = 15.6, H5b); 3.51–3.45 (m, 2H, H3 and H2); 3.38–3.32 (m, 1H, H4a); 3.00 (dd, 1H, JH,H = 14.8, 2JH,H = 8.8, H4b); 2.90 (dd, 1H, JH,H = 14.4, 2JH,H = 2.8, H1a); 2.45 (dd, 1H, JH,H = 13.6, 2JH,H = 10.4, H1b); 1.21 (s, 9H, C(CH3)3). 13C NMR δ: 164.2 (d, JC,F= 254.6, C4'); 155.2 (C═ O); 139.4; 136.6 (d, 4JC,F = 2.6, C1'); 136.5; 129.9 (d, 3JC,F = 9.4, C2' and C6'); 128.2, 128.0, 127.8, 116.2 (d, 2JC,F = 22.4, C3' and C5'); 77.4 (C(CH3)3); 71.7 (C3); 54.9 (C2); 51.2 (C5); 50.4 (C4); 35.2 (C1); 28.1 (C(CH3)3).

Refinement

The C-bound H atoms were geometrically placed (C—H = 0.95–1.00 Å) and refined as riding with Uiso(H) = 1.2–1.5Ueq(C). The O-bound H-atom was located in a difference Fourier map and refined with an O—H restraint of 0.84±0.01 Å, and with Uiso(H) = 1.5Ueq(O); the N—H H-atom was treated similarly with N—H = 0.88±0.01 Å and with Uiso(H) = 1.2Ueq(N).

Figures

Fig. 1.

Fig. 1.

Reaction scheme for the synthesis of the title compound, 3.

Fig. 2.

Fig. 2.

The molecular structure of 3 showing displacement ellipsoids at the 50% probability level.

Fig. 3.

Fig. 3.

A view of the supramolecular layer in in the ac plane (I) in 3. The O—H···O, N—H···O, C—H···O and C—H···π interactions are shown as orange, blue, brown and purple dashed lines, respectively.

Fig. 4.

Fig. 4.

A view in projection down the c axis of the stacking of supramolecular layers in 3 along the b axis. The O—H···O, N—H···O, C—H···O and C—H···π interactions are shown as orange, blue, brown and purple dashed lines, respectively.

Crystal data

C28H33FN2O5S F(000) = 560
Mr = 528.62 Dx = 1.315 Mg m3
Monoclinic, P21 Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2yb Cell parameters from 11534 reflections
a = 5.4116 (1) Å θ = 2.9–27.5°
b = 25.5513 (8) Å µ = 0.17 mm1
c = 9.8615 (3) Å T = 120 K
β = 101.641 (2)° Block, colourless
V = 1335.54 (6) Å3 0.50 × 0.24 × 0.18 mm
Z = 2

Data collection

Bruker–Nonius Roper CCD camera on a κ-goniostat diffractometer 5956 independent reflections
Radiation source: Bruker–Nonius FR591 rotating anode 5075 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.040
Detector resolution: 9.091 pixels mm-1 θmax = 27.5°, θmin = 3.2°
φ and ω scans h = −7→6
Absorption correction: multi-scan (SADABS; Sheldrick, 2007) k = −32→33
Tmin = 0.654, Tmax = 0.746 l = −12→12
12832 measured reflections

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042 H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.103 w = 1/[σ2(Fo2) + (0.0535P)2] where P = (Fo2 + 2Fc2)/3
S = 1.01 (Δ/σ)max < 0.001
5956 reflections Δρmax = 0.21 e Å3
343 parameters Δρmin = −0.33 e Å3
3 restraints Absolute structure: Flack (1983), 2848 Friedel pairs
Primary atom site location: structure-invariant direct methods Flack parameter: 0.06 (6)

Special details

Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
S1 0.52180 (9) 0.91034 (2) 0.52242 (6) 0.02540 (14)
F1 1.2856 (3) 0.99049 (6) 0.98111 (16) 0.0480 (4)
O1 0.4439 (3) 0.95265 (6) 0.42835 (19) 0.0382 (4)
O2 0.3377 (3) 0.88381 (6) 0.58349 (18) 0.0320 (4)
O3 0.9825 (3) 0.81562 (6) 0.68221 (15) 0.0258 (3)
H3O 1.088 (4) 0.8377 (8) 0.667 (3) 0.039*
O4 0.4133 (2) 0.69554 (6) 0.41684 (14) 0.0213 (3)
O5 0.6340 (3) 0.65982 (6) 0.26540 (15) 0.0221 (3)
N1 0.6512 (3) 0.86650 (7) 0.44103 (19) 0.0247 (4)
N2 0.8407 (3) 0.70276 (7) 0.44759 (18) 0.0196 (4)
H2N 0.976 (3) 0.6946 (9) 0.415 (2) 0.024*
C1 0.7491 (4) 0.93595 (8) 0.6604 (2) 0.0227 (5)
C2 0.7357 (4) 0.92322 (9) 0.7956 (3) 0.0305 (5)
H2 0.6034 0.9015 0.8134 0.037*
C3 0.9165 (5) 0.94237 (10) 0.9048 (3) 0.0369 (6)
H3 0.9092 0.9344 0.9980 0.044*
C4 1.1047 (5) 0.97287 (9) 0.8743 (3) 0.0335 (6)
C5 1.1211 (4) 0.98673 (10) 0.7422 (3) 0.0333 (6)
H5 1.2540 1.0086 0.7260 0.040*
C6 0.9407 (4) 0.96826 (9) 0.6328 (3) 0.0274 (5)
H6 0.9473 0.9775 0.5402 0.033*
C7 0.7982 (5) 0.88253 (9) 0.3363 (2) 0.0286 (5)
H7A 0.9790 0.8747 0.3714 0.034*
H7B 0.7809 0.9208 0.3209 0.034*
C8 0.7080 (4) 0.85424 (8) 0.2005 (2) 0.0237 (5)
C9 0.4706 (4) 0.86529 (9) 0.1202 (2) 0.0286 (5)
H9 0.3643 0.8901 0.1520 0.034*
C10 0.3890 (4) 0.84028 (10) −0.0058 (2) 0.0294 (5)
H10 0.2262 0.8477 −0.0593 0.035*
C11 0.5432 (4) 0.80475 (9) −0.0538 (2) 0.0299 (5)
H11 0.4876 0.7881 −0.1407 0.036*
C12 0.7775 (5) 0.79355 (10) 0.0244 (3) 0.0353 (6)
H12 0.8841 0.7690 −0.0081 0.042*
C13 0.8579 (4) 0.81823 (10) 0.1514 (2) 0.0311 (5)
H13 1.0195 0.8101 0.2053 0.037*
C14 0.6509 (4) 0.81084 (8) 0.4777 (2) 0.0227 (5)
H14A 0.5950 0.7903 0.3919 0.027*
H14B 0.5254 0.8054 0.5368 0.027*
C15 0.9042 (4) 0.78940 (8) 0.5533 (2) 0.0188 (4)
H15 1.0331 0.7949 0.4949 0.023*
C16 0.8788 (4) 0.73051 (8) 0.5795 (2) 0.0185 (4)
H16 0.7262 0.7251 0.6205 0.022*
C17 0.6120 (4) 0.68657 (8) 0.3804 (2) 0.0184 (4)
C18 0.4078 (4) 0.64183 (8) 0.1668 (2) 0.0216 (5)
C19 0.2370 (4) 0.68815 (9) 0.1142 (2) 0.0282 (5)
H19A 0.3397 0.7173 0.0918 0.042*
H19B 0.1466 0.6992 0.1860 0.042*
H19C 0.1152 0.6778 0.0309 0.042*
C20 0.5227 (4) 0.61986 (10) 0.0506 (2) 0.0308 (5)
H20A 0.6410 0.5918 0.0868 0.046*
H20B 0.6125 0.6477 0.0123 0.046*
H20C 0.3886 0.6059 −0.0223 0.046*
C21 0.2728 (4) 0.59978 (9) 0.2324 (3) 0.0297 (5)
H21A 0.1835 0.6159 0.2989 0.045*
H21B 0.3963 0.5745 0.2804 0.045*
H21C 0.1514 0.5818 0.1603 0.045*
C22 1.1081 (4) 0.70785 (8) 0.6797 (2) 0.0207 (4)
H22A 1.2620 0.7146 0.6427 0.025*
H22B 1.1273 0.7259 0.7700 0.025*
C23 1.0838 (4) 0.64964 (8) 0.7015 (2) 0.0198 (4)
C24 1.2408 (4) 0.61396 (9) 0.6537 (2) 0.0240 (5)
H24 1.3646 0.6263 0.6055 0.029*
C25 1.2194 (4) 0.56056 (10) 0.6754 (3) 0.0312 (5)
H25 1.3294 0.5366 0.6435 0.037*
C26 1.0372 (5) 0.54250 (9) 0.7437 (3) 0.0320 (6)
H26 1.0212 0.5060 0.7582 0.038*
C27 0.8783 (4) 0.57718 (9) 0.7909 (3) 0.0287 (5)
H27 0.7521 0.5645 0.8370 0.034*
C28 0.9026 (4) 0.63017 (9) 0.7710 (2) 0.0236 (5)
H28 0.7944 0.6538 0.8052 0.028*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.0209 (3) 0.0212 (3) 0.0315 (3) −0.0010 (2) −0.0008 (2) 0.0019 (2)
F1 0.0509 (9) 0.0460 (9) 0.0388 (9) −0.0038 (8) −0.0106 (7) −0.0181 (7)
O1 0.0352 (10) 0.0244 (9) 0.0473 (11) 0.0013 (7) −0.0099 (8) 0.0079 (8)
O2 0.0186 (8) 0.0303 (9) 0.0468 (11) −0.0037 (6) 0.0056 (7) −0.0027 (8)
O3 0.0302 (8) 0.0282 (9) 0.0167 (8) −0.0058 (7) −0.0009 (6) −0.0049 (7)
O4 0.0173 (7) 0.0293 (8) 0.0178 (8) −0.0033 (6) 0.0050 (6) −0.0059 (6)
O5 0.0160 (7) 0.0316 (8) 0.0176 (8) −0.0012 (6) 0.0012 (6) −0.0076 (6)
N1 0.0297 (10) 0.0237 (10) 0.0206 (10) −0.0041 (8) 0.0050 (8) 0.0039 (8)
N2 0.0165 (9) 0.0280 (10) 0.0140 (9) −0.0019 (7) 0.0025 (7) −0.0040 (7)
C1 0.0194 (10) 0.0211 (11) 0.0269 (13) 0.0018 (9) 0.0028 (9) −0.0028 (9)
C2 0.0316 (12) 0.0276 (13) 0.0335 (14) −0.0022 (10) 0.0091 (10) 0.0039 (10)
C3 0.0454 (15) 0.0358 (14) 0.0272 (14) 0.0024 (12) 0.0016 (11) −0.0034 (11)
C4 0.0383 (14) 0.0243 (12) 0.0329 (14) 0.0041 (10) −0.0044 (11) −0.0102 (10)
C5 0.0262 (12) 0.0296 (13) 0.0436 (16) −0.0063 (10) 0.0059 (11) −0.0124 (11)
C6 0.0282 (12) 0.0237 (11) 0.0309 (13) −0.0039 (9) 0.0073 (10) −0.0052 (10)
C7 0.0288 (12) 0.0325 (13) 0.0235 (12) −0.0097 (10) 0.0028 (10) 0.0057 (10)
C8 0.0231 (11) 0.0250 (11) 0.0221 (12) −0.0057 (9) 0.0027 (9) 0.0073 (9)
C9 0.0288 (12) 0.0340 (13) 0.0222 (12) 0.0030 (10) 0.0034 (9) 0.0024 (10)
C10 0.0241 (11) 0.0432 (14) 0.0192 (12) −0.0031 (10) −0.0001 (9) 0.0014 (10)
C11 0.0362 (13) 0.0315 (13) 0.0223 (12) −0.0071 (10) 0.0064 (10) 0.0000 (10)
C12 0.0348 (13) 0.0356 (14) 0.0365 (15) 0.0038 (11) 0.0094 (11) −0.0026 (11)
C13 0.0225 (11) 0.0396 (14) 0.0300 (14) 0.0011 (11) 0.0024 (9) 0.0064 (11)
C14 0.0224 (10) 0.0229 (11) 0.0217 (11) −0.0047 (9) 0.0018 (8) 0.0005 (9)
C15 0.0187 (10) 0.0230 (11) 0.0146 (10) −0.0048 (8) 0.0028 (8) −0.0019 (8)
C16 0.0185 (10) 0.0244 (10) 0.0126 (10) −0.0033 (8) 0.0031 (8) −0.0034 (8)
C17 0.0213 (10) 0.0187 (10) 0.0150 (10) −0.0010 (8) 0.0033 (8) 0.0003 (8)
C18 0.0178 (10) 0.0270 (11) 0.0179 (11) −0.0037 (9) −0.0015 (8) −0.0059 (9)
C19 0.0291 (12) 0.0306 (13) 0.0228 (12) 0.0025 (10) 0.0004 (9) 0.0007 (10)
C20 0.0281 (12) 0.0425 (14) 0.0212 (12) −0.0018 (11) 0.0035 (9) −0.0140 (11)
C21 0.0283 (12) 0.0263 (12) 0.0344 (14) −0.0023 (10) 0.0063 (10) −0.0048 (10)
C22 0.0188 (10) 0.0265 (11) 0.0164 (11) −0.0017 (9) 0.0024 (8) −0.0024 (9)
C23 0.0179 (10) 0.0273 (12) 0.0121 (10) 0.0003 (9) −0.0015 (8) −0.0015 (8)
C24 0.0221 (10) 0.0316 (12) 0.0183 (11) −0.0004 (9) 0.0044 (9) −0.0028 (9)
C25 0.0314 (13) 0.0309 (13) 0.0311 (14) 0.0052 (10) 0.0058 (11) −0.0085 (10)
C26 0.0330 (13) 0.0256 (12) 0.0349 (15) −0.0027 (10) 0.0007 (11) −0.0016 (10)
C27 0.0248 (12) 0.0338 (13) 0.0275 (13) −0.0020 (10) 0.0051 (10) 0.0028 (10)
C28 0.0210 (11) 0.0292 (12) 0.0202 (12) 0.0016 (9) 0.0030 (8) 0.0002 (9)

Geometric parameters (Å, º)

S1—O1 1.4313 (17) C12—C13 1.391 (3)
S1—O2 1.4341 (17) C12—H12 0.9500
S1—N1 1.618 (2) C13—H13 0.9500
S1—C1 1.765 (2) C14—C15 1.524 (3)
F1—C4 1.362 (3) C14—H14A 0.9900
O3—C15 1.424 (2) C14—H14B 0.9900
O3—H3O 0.840 (10) C15—C16 1.537 (3)
O4—C17 1.222 (2) C15—H15 1.0000
O5—C17 1.350 (2) C16—C22 1.535 (3)
O5—C18 1.475 (2) C16—H16 1.0000
N1—C14 1.468 (3) C18—C20 1.517 (3)
N1—C7 1.483 (3) C18—C21 1.516 (3)
N2—C17 1.346 (3) C18—C19 1.527 (3)
N2—C16 1.459 (3) C19—H19A 0.9800
N2—H2N 0.877 (10) C19—H19B 0.9800
C1—C2 1.389 (3) C19—H19C 0.9800
C1—C6 1.394 (3) C20—H20A 0.9800
C2—C3 1.390 (3) C20—H20B 0.9800
C2—H2 0.9500 C20—H20C 0.9800
C3—C4 1.363 (4) C21—H21A 0.9800
C3—H3 0.9500 C21—H21B 0.9800
C4—C5 1.371 (4) C21—H21C 0.9800
C5—C6 1.383 (3) C22—C23 1.512 (3)
C5—H5 0.9500 C22—H22A 0.9900
C6—H6 0.9500 C22—H22B 0.9900
C7—C8 1.514 (3) C23—C24 1.392 (3)
C7—H7A 0.9900 C23—C28 1.397 (3)
C7—H7B 0.9900 C24—C25 1.390 (3)
C8—C13 1.377 (3) C24—H24 0.9500
C8—C9 1.395 (3) C25—C26 1.380 (4)
C9—C10 1.388 (3) C25—H25 0.9500
C9—H9 0.9500 C26—C27 1.380 (3)
C10—C11 1.380 (3) C26—H26 0.9500
C10—H10 0.9500 C27—C28 1.378 (3)
C11—C12 1.375 (3) C27—H27 0.9500
C11—H11 0.9500 C28—H28 0.9500
O1—S1—O2 119.38 (10) O3—C15—C16 109.35 (16)
O1—S1—N1 107.57 (11) C14—C15—C16 109.39 (16)
O2—S1—N1 106.73 (10) O3—C15—H15 109.3
O1—S1—C1 106.72 (10) C14—C15—H15 109.3
O2—S1—C1 106.66 (10) C16—C15—H15 109.3
N1—S1—C1 109.56 (10) N2—C16—C22 109.95 (16)
C15—O3—H3O 104.1 (18) N2—C16—C15 109.11 (16)
C17—O5—C18 120.63 (16) C22—C16—C15 112.91 (16)
C14—N1—C7 117.84 (19) N2—C16—H16 108.3
C14—N1—S1 121.78 (15) C22—C16—H16 108.3
C7—N1—S1 120.07 (16) C15—C16—H16 108.3
C17—N2—C16 122.62 (17) O4—C17—N2 125.01 (19)
C17—N2—H2N 119.9 (15) O4—C17—O5 125.03 (18)
C16—N2—H2N 117.3 (15) N2—C17—O5 109.95 (17)
C2—C1—C6 120.7 (2) O5—C18—C20 101.61 (16)
C2—C1—S1 119.32 (17) O5—C18—C21 110.29 (17)
C6—C1—S1 119.95 (18) C20—C18—C21 111.49 (18)
C3—C2—C1 119.8 (2) O5—C18—C19 110.33 (17)
C3—C2—H2 120.1 C20—C18—C19 110.02 (19)
C1—C2—H2 120.1 C21—C18—C19 112.58 (18)
C4—C3—C2 118.1 (2) C18—C19—H19A 109.5
C4—C3—H3 121.0 C18—C19—H19B 109.5
C2—C3—H3 121.0 H19A—C19—H19B 109.5
F1—C4—C3 118.1 (2) C18—C19—H19C 109.5
F1—C4—C5 118.4 (2) H19A—C19—H19C 109.5
C3—C4—C5 123.5 (2) H19B—C19—H19C 109.5
C4—C5—C6 118.8 (2) C18—C20—H20A 109.5
C4—C5—H5 120.6 C18—C20—H20B 109.5
C6—C5—H5 120.6 H20A—C20—H20B 109.5
C5—C6—C1 119.0 (2) C18—C20—H20C 109.5
C5—C6—H6 120.5 H20A—C20—H20C 109.5
C1—C6—H6 120.5 H20B—C20—H20C 109.5
N1—C7—C8 111.22 (18) C18—C21—H21A 109.5
N1—C7—H7A 109.4 C18—C21—H21B 109.5
C8—C7—H7A 109.4 H21A—C21—H21B 109.5
N1—C7—H7B 109.4 C18—C21—H21C 109.5
C8—C7—H7B 109.4 H21A—C21—H21C 109.5
H7A—C7—H7B 108.0 H21B—C21—H21C 109.5
C13—C8—C9 118.4 (2) C23—C22—C16 112.36 (17)
C13—C8—C7 121.49 (19) C23—C22—H22A 109.1
C9—C8—C7 120.1 (2) C16—C22—H22A 109.1
C10—C9—C8 120.3 (2) C23—C22—H22B 109.1
C10—C9—H9 119.8 C16—C22—H22B 109.1
C8—C9—H9 119.8 H22A—C22—H22B 107.9
C11—C10—C9 120.3 (2) C24—C23—C28 118.0 (2)
C11—C10—H10 119.8 C24—C23—C22 121.33 (19)
C9—C10—H10 119.8 C28—C23—C22 120.64 (19)
C12—C11—C10 119.8 (2) C25—C24—C23 121.0 (2)
C12—C11—H11 120.1 C25—C24—H24 119.5
C10—C11—H11 120.1 C23—C24—H24 119.5
C11—C12—C13 119.8 (2) C26—C25—C24 119.6 (2)
C11—C12—H12 120.1 C26—C25—H25 120.2
C13—C12—H12 120.1 C24—C25—H25 120.2
C8—C13—C12 121.3 (2) C25—C26—C27 120.3 (2)
C8—C13—H13 119.3 C25—C26—H26 119.8
C12—C13—H13 119.3 C27—C26—H26 119.8
N1—C14—C15 115.05 (17) C28—C27—C26 119.9 (2)
N1—C14—H14A 108.5 C28—C27—H27 120.0
C15—C14—H14A 108.5 C26—C27—H27 120.0
N1—C14—H14B 108.5 C27—C28—C23 121.1 (2)
C15—C14—H14B 108.5 C27—C28—H28 119.4
H14A—C14—H14B 107.5 C23—C28—H28 119.4
O3—C15—C14 110.10 (17)
O1—S1—N1—C14 −152.35 (16) C7—C8—C13—C12 −177.9 (2)
O2—S1—N1—C14 −23.12 (19) C11—C12—C13—C8 −0.5 (4)
C1—S1—N1—C14 92.00 (18) C7—N1—C14—C15 66.9 (2)
O1—S1—N1—C7 34.24 (19) S1—N1—C14—C15 −106.61 (19)
O2—S1—N1—C7 163.48 (15) N1—C14—C15—O3 62.2 (2)
C1—S1—N1—C7 −81.40 (18) N1—C14—C15—C16 −177.57 (18)
O1—S1—C1—C2 135.22 (18) C17—N2—C16—C22 135.09 (19)
O2—S1—C1—C2 6.6 (2) C17—N2—C16—C15 −100.6 (2)
N1—S1—C1—C2 −108.60 (19) O3—C15—C16—N2 −170.49 (15)
O1—S1—C1—C6 −45.3 (2) C14—C15—C16—N2 68.9 (2)
O2—S1—C1—C6 −173.95 (17) O3—C15—C16—C22 −47.9 (2)
N1—S1—C1—C6 70.89 (19) C14—C15—C16—C22 −168.55 (17)
C6—C1—C2—C3 −0.7 (3) C16—N2—C17—O4 4.3 (3)
S1—C1—C2—C3 178.78 (18) C16—N2—C17—O5 −176.89 (17)
C1—C2—C3—C4 −0.8 (4) C18—O5—C17—O4 4.3 (3)
C2—C3—C4—F1 −178.3 (2) C18—O5—C17—N2 −174.58 (17)
C2—C3—C4—C5 1.8 (4) C17—O5—C18—C20 174.12 (18)
F1—C4—C5—C6 178.8 (2) C17—O5—C18—C21 −67.5 (2)
C3—C4—C5—C6 −1.2 (4) C17—O5—C18—C19 57.5 (2)
C4—C5—C6—C1 −0.3 (3) N2—C16—C22—C23 −56.3 (2)
C2—C1—C6—C5 1.3 (3) C15—C16—C22—C23 −178.44 (17)
S1—C1—C6—C5 −178.21 (18) C16—C22—C23—C24 112.4 (2)
C14—N1—C7—C8 58.6 (3) C16—C22—C23—C28 −67.9 (2)
S1—N1—C7—C8 −127.76 (17) C28—C23—C24—C25 −0.5 (3)
N1—C7—C8—C13 −112.8 (2) C22—C23—C24—C25 179.28 (19)
N1—C7—C8—C9 68.8 (3) C23—C24—C25—C26 0.9 (3)
C13—C8—C9—C10 0.1 (3) C24—C25—C26—C27 −0.4 (3)
C7—C8—C9—C10 178.6 (2) C25—C26—C27—C28 −0.6 (4)
C8—C9—C10—C11 −0.9 (4) C26—C27—C28—C23 1.1 (3)
C9—C10—C11—C12 0.9 (4) C24—C23—C28—C27 −0.5 (3)
C10—C11—C12—C13 −0.2 (4) C22—C23—C28—C27 179.71 (19)
C9—C8—C13—C12 0.6 (3)

Hydrogen-bond geometry (Å, º)

Cg1 is the centroid of the C23–C28 ring.

D—H···A D—H H···A D···A D—H···A
N2—H2n···O4i 0.88 (2) 2.36 (2) 3.179 (2) 154 (2)
O3—H3o···O2i 0.84 (2) 2.08 (2) 2.904 (2) 166 (3)
C7—H7A···O2i 0.99 2.56 3.405 (3) 143
C22—H22A···O4i 0.99 2.57 3.358 (2) 137
C20—H20C···Cg1ii 0.98 2.78 3.719 (2) 160

Symmetry codes: (i) x+1, y, z; (ii) x−1, y, z−1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB6679).

References

  1. Brandenburg, K. (2006). DIAMOND Crystal Impact GbR, Bonn, Germany.
  2. Cunico, W., Ferreira, M. L. G., Ferreira, T. G., Penido, C., Henriques, M. G. M. O., Krettli, L. G., Varotti, F. P. & Krettli, A. U. (2008). Lett. Drug. Des. Discov. 5, 178–181.
  3. Cunico, W., Gomes, C. R. B., Ferreira, M. L. G., Ferreira, T. G., Cardinot, D., de Souza, M. V. N. & Lourenço, M. C. S. (2011). Eur. J. Med. Chem. 46, 974–978. [DOI] [PubMed]
  4. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  5. Ferreira, M. L., Vasconcelos, T. R. A., de Carvalho, E. M., Lourenço, M. C. S., Wardell, S. M. S. V., Wardell, J. L., Ferreira, V. F. & de Souza, M. V. N. (2009). Carbohyd. Res 344, 2042–2047. [DOI] [PubMed]
  6. Flack, H. D. (1983). Acta Cryst. A39, 876–881.
  7. Gomes, C. R. B., Moreth, M., Cardinot, D., Kopke, V., Cunico, W., da Silva Lourenço, M. C. & de Souza, M. V. N. (2011). Chem. Biol. Drug Des. 78, 1031–1034. [DOI] [PubMed]
  8. Hooft, R. W. W. (1998). COLLECT Nonius BV, Delft, The Netherlands.
  9. Otwinowski, Z. & Minor, W. (1997). Methods in Enzymology, Vol. 276, Macromolecular Crystallography, Part A, edited by C. W. Carter Jr & R. M. Sweet, pp. 307–326. New York: Academic Press.
  10. Sheldrick, G. M. (2007). SADABS University of Göttingen, Germany.
  11. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  12. Souza, M. V. N. de (2006). Recent. Pat. Anti-Infect. Drug Discovery, 1, 33–44. [DOI] [PubMed]
  13. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.
  14. Yendapally, R. & Lee, R. E. (2008). Bioorg. Med. Chem. Lett. 18, 1607–1611. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812011440/hb6679sup1.cif

e-68-o1138-sup1.cif (25.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812011440/hb6679Isup2.hkl

e-68-o1138-Isup2.hkl (285.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812011440/hb6679Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

RESOURCES