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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Apr 13;68(Pt 5):m595. doi: 10.1107/S1600536812014936

catena-Poly[(aqua­dimethano­lzinc)-μ-furan-2,5-dicarboxyl­ato-κ3 O 2:O 2,O 2′]

Ya-Feng Li a,*, Yue Gao a, Yue Xu a, Xiao-Lin Qin a, Wen-Yuan Gao a
PMCID: PMC3344337  PMID: 22590103

Abstract

In the crystal structure of the title compound, [Zn(C6H2O5)(CH3OH)2(H2O)]n, an infinite chain is formed along the b axis by linking of the Zn(OH2)(CH3OH)2 unit with one carboxyl­ate group of the furan-2,5-dicarboxyl­ate ligand. The ZnII ion is in a distorted octa­hedral environment with one weak coordination [Zn—Ocarboxyl­ate = 2.565 (3) Å] and two meth­anol mol­ecules located in axial positions. In the chain, Owater—H⋯O hydrogen bonds are present, while adjacent chains are linked by Omethanol—H⋯O hydrogen bonds into a layer parallel to (10-2).

Related literature  

For applications and structures of metal-organic framework materials, see: Chui et al. (1999); Corma et al. (2010); Ferey (2008); Li et al. (1999, 2012a ,b ); Ma et al. (2009); Murray et al. (2009); Tranchemontagne et al. (2009).graphic file with name e-68-0m595-scheme1.jpg

Experimental  

Crystal data  

  • [Zn(C6H2O5)(CH4O)2(H2O)]

  • M r = 301.57

  • Monoclinic, Inline graphic

  • a = 10.077 (2) Å

  • b = 8.1235 (16) Å

  • c = 17.101 (3) Å

  • β = 124.86 (3)°

  • V = 1148.7 (6) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 2.17 mm−1

  • T = 293 K

  • 0.10 × 0.10 × 0.10 mm

Data collection  

  • Rigaku R-AXIS RAPID diffractometer

  • Absorption correction: multi-scan (ABSCOR; Higashi, 1995) T min = 0.813, T max = 0.813

  • 10467 measured reflections

  • 2605 independent reflections

  • 1593 reflections with I > 2σ(I)

  • R int = 0.119

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.062

  • wR(F 2) = 0.142

  • S = 1.01

  • 2605 reflections

  • 168 parameters

  • 5 restraints

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.61 e Å−3

  • Δρmin = −0.71 e Å−3

Data collection: PROCESS-AUTO (Rigaku, 1998); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2000); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812014936/is5106sup1.cif

e-68-0m595-sup1.cif (21.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812014936/is5106Isup2.hkl

e-68-0m595-Isup2.hkl (128KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O1W—H1A⋯O1i 0.83 (2) 1.92 (2) 2.745 (5) 171 (5)
O1W—H1B⋯O5ii 0.83 (2) 1.76 (2) 2.571 (5) 165 (5)
O7—H7⋯O4iii 0.82 (2) 1.86 (3) 2.639 (5) 158 (6)
O8—H8⋯O4iv 0.82 (2) 1.88 (3) 2.682 (5) 163 (6)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic.

Acknowledgments

This project was sponsored by the Scientific Research Foundation for the Returned Overseas Team, Chinese Education Ministry.

supplementary crystallographic information

Comment

During past decades, more efforts have made to construct the metal organic framework (MOF) materials due to the potential applications including gas absorption and catalyst reactions (Ma et al., 2009; Murray et al., 2009; Corma et al., 2010). The more attentions have been focused on the MOF based on the phenyl ring with carboxylate groups (Chui et al., 1999; Li et al., 1999; Ferey, 2008; Tranchemontagne et al., 2009). Compared with phenyl ring with carboxylate groups, the 5-membered rings with carboxylate groups as the ligand are rarely studied. Recently, we utilize furan-2,5-dicarboxyl acid as the ligand to constructed the MOFs (Li et al., 2012a,b). In this work, a novel chainlike compound, [Zn(C6H2O5)(H2O)(CH3OH)2]n, (I), is structurally determined.

The asymmetric unit of (I) contains one ZnII cation, one furan-2,5-dicarboxylate anion, one water and two methanol molecules (Fig. 1). The ZnII cation is coordinated by three carboxylate O atoms, one water molecule and two methanol molecules which locate at the axial positions, exhibiting a distorted octahedron. The oxygen of carboxylate [Zn—Ocarboxylate = 2.565 (2) Å] is very weakly ligated to the Zn cation. If excluding this oxygen, the ZnII ion displays a distorted triganol bipyramid geometry but the chain property may not be changed. Only one carboxyl of furan-2,5-dicarboxylate involves in the formation of infinite chain. The carboxyl shows a µ212 coordinated mode.

The ZnII cations are linked by one carboxylate of furan-2,5-dicarboxylate to give rise to an infinite chain (Fig. 2). Owater–H···O hydrogen bonds are intra-chain interactions, while Omethanol–H···O hydrogen bonds inter-chain interactions which are responsible to link the adjacent chains into a layer parallel to the (102) plane (Fig. 3).

Experimental

In a typically synthesized route of (I), furan-2,5-dicarboxyl acid (0.312 g, 2.0 mmol) and Zn(NO3)2.6H2O (0.592 g, 2.0 mmol) were dissolved in DMF (7.8 ml, 0.1 mol) under stirring. Then, 72 ml methanol ann N(et)3 (0.29 ml, 2.0 mmol) were successively added. The mixture with molar ratio of 1 (furan-2,5-dicarboxyl acid): 1 (Zn(NO3)2.6H2O): 1 (N(et)3) was laid under room temperature for 4 days. The colorless block product was collected as a single phase.

Refinement

Water H atoms were located in a difference Fourier map and refined with distance restraints of O—H = 0.82 (2) Å and H···H = 1.37 (2) Å, and with Uiso(H) = 1.2Ueq(O). Hydroxyl H atoms were located in a difference Fourier map and refined with a restraint of O—H = 0.82 (2) Å, and with Uiso(H) = 1.2Ueq(O). The carbon H-atoms were placed in calculated positions [C—H (furan ring) = 0.93 Å and C—H (methyl) = 0.96 Å] and were included in the refinement in the riding-model approximation, with Uiso(H) = 1.2Ueq(C).

Figures

Fig. 1.

Fig. 1.

The asymmetric unit of the title compound, showing the atomic labelling scheme and displacement ellipsoids at the 50% probability level. [Symmetry code: (i) 1 - x, -1/2 + y, 1/2 - z.]

Fig. 2.

Fig. 2.

The stick plot of the title compound, displaying the infinite chain along the [010] direction formed by linking the ZnII ion with one carboxyl of furan-2,5-dicarboxylate.

Fig. 3.

Fig. 3.

The ball-stick packing diagram of the title compound. The adjacent chains are held together by the Omethanol–H···O hydrogen bonds into layers.

Crystal data

[Zn(C6H2O5)(CH4O)2(H2O)] F(000) = 616
Mr = 301.57 Dx = 1.744 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 2000 reflections
a = 10.077 (2) Å θ = 3.2–27.5°
b = 8.1235 (16) Å µ = 2.17 mm1
c = 17.101 (3) Å T = 293 K
β = 124.86 (3)° Block, colorless
V = 1148.7 (6) Å3 0.10 × 0.10 × 0.10 mm
Z = 4

Data collection

Rigaku R-AXIS RAPID diffractometer 2605 independent reflections
Radiation source: fine-focus sealed tube 1593 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.119
Detector resolution: 10.00 pixels mm-1 θmax = 27.5°, θmin = 3.2°
ω scans h = −13→13
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) k = −10→10
Tmin = 0.813, Tmax = 0.813 l = −22→22
10467 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.062 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.142 H atoms treated by a mixture of independent and constrained refinement
S = 1.01 w = 1/[σ2(Fo2) + (0.057P)2] where P = (Fo2 + 2Fc2)/3
2605 reflections (Δ/σ)max < 0.001
168 parameters Δρmax = 0.61 e Å3
5 restraints Δρmin = −0.71 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Zn1 0.44202 (7) 0.83143 (7) 0.20225 (4) 0.0346 (2)
O1 0.6292 (4) 0.8216 (4) 0.3472 (2) 0.0380 (9)
O2 0.5778 (4) 1.0836 (4) 0.3099 (2) 0.0389 (9)
O4 1.1259 (4) 1.3677 (4) 0.7066 (2) 0.0438 (10)
O5 0.9191 (5) 1.4792 (4) 0.5739 (3) 0.0589 (13)
O1W 0.3262 (4) 0.9960 (4) 0.1007 (3) 0.0475 (11)
H1A 0.334 (6) 1.097 (3) 0.110 (3) 0.057*
H1B 0.244 (4) 0.976 (5) 0.047 (2) 0.057*
C1 0.6580 (5) 0.9708 (5) 0.3707 (3) 0.0294 (12)
C2 0.7857 (5) 1.0133 (5) 0.4697 (3) 0.0297 (11)
O3 0.8150 (4) 1.1781 (3) 0.4901 (2) 0.0329 (8)
C3 0.9431 (6) 1.1887 (6) 0.5841 (3) 0.0334 (12)
C5 0.9904 (6) 1.0374 (6) 0.6215 (4) 0.0401 (14)
H5 1.0737 1.0123 0.6841 0.048*
C4 0.8892 (6) 0.9213 (6) 0.5474 (3) 0.0365 (13)
H4 0.8937 0.8071 0.5519 0.044*
C6 0.9997 (6) 1.3588 (6) 0.6231 (4) 0.0382 (13)
O7 0.6257 (4) 0.8255 (5) 0.1789 (3) 0.0463 (10)
H7 0.708 (5) 0.785 (7) 0.224 (3) 0.056*
C7 0.5999 (8) 0.8006 (8) 0.0889 (4) 0.066 (2)
H7A 0.5788 0.6861 0.0722 0.080*
H7B 0.6945 0.8338 0.0923 0.080*
H7C 0.5089 0.8649 0.0414 0.080*
O8 0.2706 (5) 0.8407 (4) 0.2328 (3) 0.0519 (10)
H8 0.225 (6) 0.931 (4) 0.214 (4) 0.062*
C8 0.2859 (9) 0.7722 (8) 0.3147 (5) 0.0660 (19)
H8A 0.3299 0.6631 0.3258 0.079*
H8B 0.1814 0.7675 0.3038 0.079*
H8C 0.3566 0.8399 0.3692 0.079*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Zn1 0.0342 (4) 0.0245 (3) 0.0305 (3) 0.0015 (2) 0.0098 (3) 0.0008 (3)
O1 0.043 (2) 0.0227 (16) 0.0330 (18) −0.0025 (15) 0.0124 (16) −0.0055 (15)
O2 0.040 (2) 0.0242 (17) 0.0311 (19) 0.0018 (15) 0.0075 (17) 0.0067 (15)
O4 0.037 (2) 0.0347 (19) 0.0316 (19) 0.0007 (16) 0.0034 (16) −0.0017 (16)
O5 0.055 (2) 0.0290 (19) 0.042 (2) 0.0009 (18) −0.0027 (19) −0.0061 (18)
O1W 0.050 (2) 0.0228 (17) 0.0315 (19) −0.0047 (17) 0.0005 (17) −0.0004 (16)
C1 0.031 (3) 0.020 (2) 0.031 (3) −0.0002 (19) 0.015 (2) 0.000 (2)
C2 0.029 (3) 0.023 (2) 0.030 (3) −0.003 (2) 0.012 (2) −0.009 (2)
O3 0.0324 (18) 0.0215 (15) 0.0272 (16) −0.0021 (14) 0.0068 (14) −0.0041 (14)
C3 0.028 (2) 0.032 (3) 0.025 (2) −0.004 (2) 0.006 (2) −0.002 (2)
C5 0.033 (3) 0.036 (3) 0.032 (3) 0.000 (2) 0.007 (2) 0.004 (2)
C4 0.036 (3) 0.025 (2) 0.035 (3) −0.001 (2) 0.013 (2) 0.000 (2)
C6 0.036 (3) 0.034 (3) 0.033 (3) −0.003 (2) 0.012 (2) −0.006 (2)
O7 0.041 (2) 0.051 (2) 0.038 (2) 0.0064 (18) 0.0175 (18) 0.0070 (19)
C7 0.071 (5) 0.081 (5) 0.047 (4) 0.019 (4) 0.033 (3) 0.010 (3)
O8 0.048 (2) 0.041 (2) 0.067 (3) 0.0144 (18) 0.033 (2) 0.019 (2)
C8 0.084 (5) 0.054 (4) 0.071 (5) 0.008 (4) 0.051 (4) 0.018 (4)

Geometric parameters (Å, º)

Zn1—O1W 1.962 (3) O3—C3 1.372 (5)
Zn1—O2i 2.022 (3) C3—C5 1.341 (6)
Zn1—O8 2.072 (4) C3—C6 1.499 (6)
Zn1—O1 2.090 (4) C5—C4 1.435 (6)
Zn1—O7 2.105 (4) C5—H5 0.9300
Zn1—O2 2.565 (3) C4—H4 0.9300
O1—C1 1.257 (5) O7—C7 1.421 (7)
O2—C1 1.270 (5) O7—H7 0.817 (19)
O2—Zn1ii 2.022 (3) C7—H7A 0.9600
O4—C6 1.259 (5) C7—H7B 0.9600
O5—C6 1.243 (6) C7—H7C 0.9600
O1W—H1A 0.828 (19) O8—C8 1.430 (7)
O1W—H1B 0.828 (19) O8—H8 0.82 (2)
C1—C2 1.467 (6) C8—H8A 0.9600
C2—C4 1.352 (6) C8—H8B 0.9600
C2—O3 1.372 (5) C8—H8C 0.9600
O1W—Zn1—O2i 127.86 (14) C5—C3—C6 133.7 (4)
O1W—Zn1—O8 92.21 (17) O3—C3—C6 116.3 (4)
O2i—Zn1—O8 90.81 (15) C3—C5—C4 107.5 (4)
O1W—Zn1—O1 138.87 (13) C3—C5—H5 126.2
O2i—Zn1—O1 93.05 (12) C4—C5—H5 126.2
O8—Zn1—O1 91.10 (16) C2—C4—C5 105.3 (4)
O1W—Zn1—O7 89.45 (17) C2—C4—H4 127.3
O2i—Zn1—O7 90.23 (15) C5—C4—H4 127.3
O8—Zn1—O7 176.90 (15) O5—C6—O4 124.6 (4)
O1—Zn1—O7 85.93 (15) O5—C6—C3 119.3 (4)
O1W—Zn1—O2 83.95 (13) O4—C6—C3 116.0 (4)
O2i—Zn1—O2 148.19 (7) C7—O7—Zn1 124.9 (4)
O8—Zn1—O2 88.27 (15) C7—O7—H7 116 (4)
O1—Zn1—O2 55.19 (11) Zn1—O7—H7 111 (4)
O7—Zn1—O2 89.31 (13) O7—C7—H7A 109.5
C1—O1—Zn1 103.2 (3) O7—C7—H7B 109.5
C1—O2—Zn1ii 141.4 (3) H7A—C7—H7B 109.5
C1—O2—Zn1 80.8 (3) O7—C7—H7C 109.5
Zn1ii—O2—Zn1 137.77 (14) H7A—C7—H7C 109.5
Zn1—O1W—H1A 124 (3) H7B—C7—H7C 109.5
Zn1—O1W—H1B 124 (3) C8—O8—Zn1 126.4 (4)
H1A—O1W—H1B 110 (3) C8—O8—H8 117 (5)
O1—C1—O2 120.8 (4) Zn1—O8—H8 107 (4)
O1—C1—C2 119.0 (4) O8—C8—H8A 109.5
O2—C1—C2 120.2 (4) O8—C8—H8B 109.5
C4—C2—O3 110.9 (4) H8A—C8—H8B 109.5
C4—C2—C1 132.8 (4) O8—C8—H8C 109.5
O3—C2—C1 116.3 (4) H8A—C8—H8C 109.5
C3—O3—C2 106.3 (3) H8B—C8—H8C 109.5
C5—C3—O3 110.0 (4)
O1W—Zn1—O1—C1 7.3 (5) O1—C1—C2—O3 177.9 (4)
O2i—Zn1—O1—C1 −178.2 (3) O2—C1—C2—O3 −2.3 (7)
O8—Zn1—O1—C1 −87.3 (3) C4—C2—O3—C3 0.7 (6)
O7—Zn1—O1—C1 91.8 (3) C1—C2—O3—C3 −176.8 (4)
O2—Zn1—O1—C1 −0.2 (3) C2—O3—C3—C5 −1.1 (6)
O1W—Zn1—O2—C1 −174.9 (3) C2—O3—C3—C6 179.2 (4)
O2i—Zn1—O2—C1 4.0 (3) O3—C3—C5—C4 1.0 (6)
O8—Zn1—O2—C1 92.7 (3) C6—C3—C5—C4 −179.3 (6)
O1—Zn1—O2—C1 0.2 (3) O3—C2—C4—C5 −0.1 (6)
O7—Zn1—O2—C1 −85.3 (3) C1—C2—C4—C5 176.8 (5)
O1W—Zn1—O2—Zn1ii 5.4 (3) C3—C5—C4—C2 −0.5 (6)
O2i—Zn1—O2—Zn1ii −175.7 (3) C5—C3—C6—O5 −171.4 (6)
O8—Zn1—O2—Zn1ii −87.0 (3) O3—C3—C6—O5 8.3 (8)
O1—Zn1—O2—Zn1ii −179.5 (3) C5—C3—C6—O4 6.4 (10)
O7—Zn1—O2—Zn1ii 95.0 (3) O3—C3—C6—O4 −174.0 (5)
Zn1—O1—C1—O2 0.4 (6) O1W—Zn1—O7—C7 −52.1 (4)
Zn1—O1—C1—C2 −179.9 (4) O2i—Zn1—O7—C7 75.8 (4)
Zn1ii—O2—C1—O1 179.4 (4) O1—Zn1—O7—C7 168.8 (4)
Zn1—O2—C1—O1 −0.3 (5) O2—Zn1—O7—C7 −136.1 (4)
Zn1ii—O2—C1—C2 −0.4 (8) O1W—Zn1—O8—C8 −167.6 (5)
Zn1—O2—C1—C2 179.9 (5) O2i—Zn1—O8—C8 64.5 (5)
O1—C1—C2—C4 1.1 (9) O1—Zn1—O8—C8 −28.6 (5)
O2—C1—C2—C4 −179.1 (5) O2—Zn1—O8—C8 −83.7 (5)

Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) −x+1, y+1/2, −z+1/2.

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
O1W—H1A···O1ii 0.83 (2) 1.92 (2) 2.745 (5) 171 (5)
O1W—H1B···O5i 0.83 (2) 1.76 (2) 2.571 (5) 165 (5)
O7—H7···O4iii 0.82 (2) 1.86 (3) 2.639 (5) 158 (6)
O8—H8···O4iv 0.82 (2) 1.88 (3) 2.682 (5) 163 (6)

Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) −x+1, y+1/2, −z+1/2; (iii) −x+2, −y+2, −z+1; (iv) x−1, −y+5/2, z−1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: IS5106).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812014936/is5106sup1.cif

e-68-0m595-sup1.cif (21.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812014936/is5106Isup2.hkl

e-68-0m595-Isup2.hkl (128KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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