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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Apr 21;68(Pt 5):m641–m642. doi: 10.1107/S160053681201642X

catena-Poly[[(2-amino-1,3-benzothia­zole-6-carboxyl­ato-κ2 O,O′)(2,2′-bipyridyl-κ2 N,N′)cadmium]-μ-2-amino-1,3-benzothia­zole-6-carboxyl­ato-κ3 N 1:O,O′]

Dan Gao a, Xin Fang a,*, Ke-Ke Zhang a, Li-Mao Cai a, Jun-Dong Wang a
PMCID: PMC3344366  PMID: 22590132

Abstract

In the title coordination polymer, [Cd(C8H5N2O2S)2(C10H8N2)]n, the CdII ion is coordinated by a bidentate 2,2-bipyridyl ligand, two O,O′-chelating 2-amino-1,3-benzothia­zole-6-carboxyl­ate (ABTC) ligands and one N-bonded ABTC ligand. The resulting CdN3O4 coordination polyhedron approximates to a very distorted penta­gonal bipramid with one O and one N atom in axial positions. One of the ABTC ligands is bridging to an adjacent metal atom, generating an infinite chain propagating in [100]. A three-dimensional network is constructed from N—H⋯O and N—H⋯N hydrogen bonds and aromatic π–π stacking inter­actions [centroid–centroid separations = 3.641 (2) and 3.682 (3) Å].

Related literature  

For our recent work on the design and sythesis of benzothia­zole coordination networks, see: Fang et al. (2010 ▶); Lei et al. (2010 ▶). For the synthesis of the ligand, see: Das et al. (2003 ▶).graphic file with name e-68-0m641-scheme1.jpg

Experimental  

Crystal data  

  • [Cd(C8H5N2O2S)2(C10H8N2)]

  • M r = 640.87

  • Triclinic, Inline graphic

  • a = 9.977 (2) Å

  • b = 11.715 (2) Å

  • c = 11.734 (2) Å

  • α = 65.28 (3)°

  • β = 77.52 (3)°

  • γ = 77.15 (3)°

  • V = 1202.8 (4) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 1.13 mm−1

  • T = 173 K

  • 0.27 × 0.18 × 0.13 mm

Data collection  

  • Rigaku Saturn 724 CCD area-detector diffractometer

  • Absorption correction: numerical (NUMABS; Higashi, 2000 ▶) T min = 0.837, T max = 1.000

  • 10158 measured reflections

  • 5296 independent reflections

  • 5015 reflections with I > 2σ(I)

  • R int = 0.037

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.040

  • wR(F 2) = 0.088

  • S = 1.08

  • 5296 reflections

  • 352 parameters

  • H-atom parameters constrained

  • Δρmax = 1.50 e Å−3

  • Δρmin = −0.72 e Å−3

Data collection: CrystalClear (Rigaku, 2007 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEX (McArdle, 1995 ▶); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681201642X/hb6715sup1.cif

e-68-0m641-sup1.cif (29.6KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681201642X/hb6715Isup2.hkl

e-68-0m641-Isup2.hkl (259.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Selected bond lengths (Å).

Cd1—N3 2.345 (3)
Cd1—O3i 2.372 (2)
Cd1—O1 2.381 (3)
Cd1—N1 2.391 (3)
Cd1—O2 2.415 (3)
Cd1—O4i 2.422 (2)
Cd1—N2 2.484 (3)

Symmetry code: (i) Inline graphic.

Table 2. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A D⋯A D—H⋯A
N6—H6A⋯O3ii 0.88 2.10 2.917 (4) 155
N6—H6B⋯O3iii 0.88 2.12 2.996 (4) 173
N4—H4A⋯O4i 0.88 2.25 3.101 (4) 162
N4—H4B⋯N5iv 0.88 2.21 3.066 (4) 163

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic.

Acknowledgments

The authors gratefully acknowledge financial support from the Foundations of Fuzhou University (2010-XQ-06) and the Education Department of Fujian Province (JA11020).

supplementary crystallographic information

Comment

As part of our ongoing studies of benzothiaole-based coordination networks (Fang et al., 2010; Lei et al., 2010), we now report the structure of a coordination polymer of cadmium and 2-amino-1,3-benzothiazole-6-carboxylate (ABTC) with 2,2'-bipyridine (bpy) as second ligand.

The polymer is a triclinic system crystal and it crystallizes in the space group of P-1. In the asymmetric unit (Fig. 1), center Cd (II) is seven-coordinated with (κ1, κ2)-µ2 coordination model, where one bpy provides two N atoms, one ABTC affords two O atoms, and the another ABTC affords two O atoms and one N atom of thiazole. The four Cd—O bonds are Cd1—O1, Cd1—O2, Cd1—O3, and Cd1—O4, with distance of 2.380 (7) Å, 2.415 (7) Å, 2.371 (3) Å, and 2.422 (6) Å, respectively. The three Cd—N bonds are Cd1—N1, Cd1—N2, and Cd1—N3, with distance of 2.390 (8) Å, 2.484 (1) Å, and 2.345 (6) Å, respectively, where the Cd1—N2 distance is slightly longer than common distance of Cd and N.

The asymmetric units are forming chains extending along the a axis (Fig. 2), through the one ABTC coordinated to two Cd(II) simultaneously by O from carboxylate and N from thiazole ring, respectively. Furthermore, three-dimensional supermolecular net (Fig. 3) are constructed by hydrogen bonds, as listed in Table 1, and π-π interactions [between thiazole and benzene rings (with certroid-centroid distance of 3.682 (3) Å and centroid-ring plane distance of 3.350 (9) and 3.404 (3) Å), and between the thiazole and bpy rings (with certroid-centroid distance of 3.641 (2) Å and centroid-ring plane distance of 3.478 (9) and 3.331 (7) Å)].

Experimental

The 2-aminobenzothiazole-6-carboxylic acid ligand was obtained by hydrolyzing of ethyl-2-amion-1,3-benzothiazole-6-carboxylate (Das et al. 2003). The mixture of cadmium carbonate (0.0172 g, 0.1 mol), 2-aminobenzothiazole-6-carboxylic acid (0.0388 g, 0.2 mol), 2,2'-bipyridine (0.0160 g, 0.1 mol) and H2O (8 ml) was sealed in a 23 ml stainless-steel reactor with Teflon liner and heated (283 K per hour) from room temperature to 423 K and kept at 423 K for 4 days, then cooled (279 K per hour) to room temperature. Colorless prisms were obtained.

Refinement

All hydrogen atoms were positioned geometrically and refined in a riding model approximation with Uiso (H) = 1.2 Ueq (C) or Ueq (N).

Figures

Fig. 1.

Fig. 1.

The coordination environment of Cd atom, drawn with 50% probability displacement ellipsoids. [Symmetry codes: (i)1 + x,y,z; (ii)-1 + x,y,z]

Fig. 2.

Fig. 2.

A Chain formed by Cd1—N3 bond. H atoms are omitted.

Fig. 3.

Fig. 3.

Three-dimensional net with hydrogen bonds and π-π interactions. H atoms are omitted except those forming hydrogen bonds.

Crystal data

[Cd(C8H5N2O2S)2(C10H8N2)] Z = 2
Mr = 640.87 F(000) = 656.0
Triclinic, P1 Dx = 1.770 Mg m−3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 9.977 (2) Å Cell parameters from 4682 reflections
b = 11.715 (2) Å θ = 3.1–27.6°
c = 11.734 (2) Å µ = 1.13 mm−1
α = 65.28 (3)° T = 173 K
β = 77.52 (3)° Prism, colourless
γ = 77.15 (3)° 0.27 × 0.18 × 0.13 mm
V = 1202.8 (4) Å3

Data collection

Rigaku Saturn 724 CCD area-detector diffractometer 5296 independent reflections
Radiation source: fine-focus sealed tube 5015 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.037
Detector resolution: 28.5714 pixels mm-1 θmax = 27.6°, θmin = 3.6°
dtprofit.ref scans h = −12→12
Absorption correction: numerical (NUMABS; Higashi, 2000) k = −14→15
Tmin = 0.837, Tmax = 1.000 l = −14→15
10158 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.088 H-atom parameters constrained
S = 1.08 w = 1/[σ2(Fo2) + (0.0263P)2 + 2.5814P] where P = (Fo2 + 2Fc2)/3
5296 reflections (Δ/σ)max = 0.001
352 parameters Δρmax = 1.50 e Å−3
0 restraints Δρmin = −0.72 e Å−3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Cd1 0.30365 (2) 0.70429 (2) 0.09531 (2) 0.01412 (8)
S2 0.41833 (9) 0.83130 (8) −0.62591 (8) 0.01725 (17)
O1 0.3596 (3) 0.7157 (2) −0.1166 (2) 0.0248 (6)
O2 0.2554 (3) 0.8927 (3) −0.0912 (2) 0.0271 (6)
N1 0.1528 (3) 0.8327 (3) 0.1983 (3) 0.0155 (6)
N2 0.2833 (3) 0.5972 (3) 0.3298 (3) 0.0180 (6)
N5 0.3521 (3) 1.0786 (3) −0.6983 (3) 0.0158 (6)
N6 0.4267 (3) 1.0043 (3) −0.8634 (3) 0.0213 (6)
H6A 0.4161 1.0813 −0.9227 0.026*
H6B 0.4567 0.9382 −0.8844 0.026*
S1 0.06488 (8) 0.34375 (7) 0.19139 (8) 0.01547 (16)
N3 0.1635 (3) 0.5537 (3) 0.1288 (3) 0.0140 (5)
N4 0.3306 (3) 0.3686 (3) 0.1717 (3) 0.0178 (6)
H4A 0.3994 0.4110 0.1563 0.021*
H4B 0.3471 0.2856 0.1940 0.021*
O4 −0.4784 (2) 0.5623 (2) 0.1301 (2) 0.0175 (5)
O3 −0.4823 (2) 0.7664 (2) 0.0858 (2) 0.0172 (5)
C1 0.1130 (3) 0.9574 (3) 0.1355 (3) 0.0179 (7)
H1 0.1300 0.9911 0.0456 0.021*
C2 0.0484 (4) 1.0395 (3) 0.1951 (3) 0.0196 (7)
H2 0.0224 1.1273 0.1470 0.023*
C3 0.0224 (4) 0.9910 (3) 0.3263 (3) 0.0201 (7)
H3 −0.0199 1.0452 0.3699 0.024*
C4 0.0592 (3) 0.8621 (3) 0.3925 (3) 0.0195 (7)
H4 0.0400 0.8262 0.4824 0.023*
C5 0.1251 (3) 0.7848 (3) 0.3261 (3) 0.0160 (6)
C6 0.1758 (4) 0.6489 (3) 0.3931 (3) 0.0171 (7)
C7 0.1184 (4) 0.5801 (4) 0.5154 (3) 0.0245 (8)
H7 0.0404 0.6179 0.5569 0.029*
C8 0.1773 (4) 0.4542 (4) 0.5763 (3) 0.0267 (8)
H8 0.1392 0.4042 0.6596 0.032*
C9 0.2915 (4) 0.4038 (3) 0.5134 (3) 0.0249 (8)
H9 0.3361 0.3195 0.5541 0.030*
C10 0.3402 (4) 0.4771 (3) 0.3908 (4) 0.0236 (7)
H10 0.4178 0.4408 0.3475 0.028*
C11 0.0212 (3) 0.5869 (3) 0.1247 (3) 0.0144 (6)
C12 −0.0528 (3) 0.7099 (3) 0.0958 (3) 0.0155 (6)
H12 −0.0063 0.7795 0.0771 0.019*
C13 −0.1952 (3) 0.7287 (3) 0.0949 (3) 0.0163 (6)
H13 −0.2461 0.8115 0.0777 0.020*
C14 −0.2650 (3) 0.6284 (3) 0.1187 (3) 0.0150 (6)
C15 −0.1930 (3) 0.5050 (3) 0.1483 (3) 0.0147 (6)
H15 −0.2395 0.4360 0.1651 0.018*
C16 −0.0512 (3) 0.4864 (3) 0.1522 (3) 0.0135 (6)
C17 0.2006 (3) 0.4302 (3) 0.1613 (3) 0.0139 (6)
C18 0.3359 (3) 1.0268 (3) −0.5664 (3) 0.0163 (6)
C19 0.2953 (4) 1.0964 (3) −0.4897 (3) 0.0193 (7)
H19 0.2735 1.1864 −0.5264 0.023*
C20 0.2872 (3) 1.0324 (3) −0.3587 (3) 0.0191 (7)
H20 0.2600 1.0796 −0.3064 0.023*
C21 0.3182 (3) 0.9002 (3) −0.3027 (3) 0.0176 (7)
C22 0.3572 (3) 0.8301 (3) −0.3795 (3) 0.0183 (7)
H22 0.3774 0.7400 −0.3426 0.022*
C23 0.3659 (3) 0.8933 (3) −0.5094 (3) 0.0161 (6)
C24 0.3974 (3) 0.9876 (3) −0.7413 (3) 0.0172 (7)
C25 0.3105 (3) 0.8324 (3) −0.1607 (3) 0.0187 (7)
C26 −0.4178 (3) 0.6531 (3) 0.1118 (3) 0.0136 (6)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Cd1 0.01171 (12) 0.01595 (13) 0.01451 (12) −0.00318 (9) −0.00112 (8) −0.00551 (9)
S2 0.0197 (4) 0.0161 (4) 0.0165 (4) −0.0033 (3) −0.0023 (3) −0.0066 (3)
O1 0.0318 (15) 0.0235 (13) 0.0170 (12) −0.0069 (11) −0.0032 (11) −0.0045 (10)
O2 0.0271 (14) 0.0345 (15) 0.0163 (12) 0.0047 (12) −0.0040 (11) −0.0107 (11)
N1 0.0119 (13) 0.0193 (14) 0.0155 (13) −0.0037 (11) −0.0031 (11) −0.0057 (11)
N2 0.0215 (15) 0.0161 (14) 0.0160 (13) −0.0020 (11) −0.0040 (11) −0.0057 (11)
N5 0.0151 (14) 0.0150 (13) 0.0162 (13) −0.0039 (11) −0.0023 (11) −0.0042 (11)
N6 0.0279 (16) 0.0182 (14) 0.0164 (14) −0.0030 (12) 0.0008 (12) −0.0075 (12)
S1 0.0135 (4) 0.0134 (4) 0.0192 (4) −0.0021 (3) −0.0022 (3) −0.0061 (3)
N3 0.0088 (13) 0.0160 (13) 0.0164 (13) −0.0019 (10) −0.0019 (10) −0.0055 (11)
N4 0.0134 (13) 0.0166 (14) 0.0221 (14) −0.0005 (11) −0.0021 (11) −0.0074 (11)
O4 0.0112 (11) 0.0196 (12) 0.0232 (12) −0.0049 (9) −0.0019 (9) −0.0086 (10)
O3 0.0142 (11) 0.0171 (11) 0.0198 (12) −0.0035 (9) −0.0024 (9) −0.0061 (9)
C1 0.0201 (17) 0.0195 (16) 0.0151 (15) −0.0069 (14) −0.0032 (13) −0.0053 (13)
C2 0.0195 (17) 0.0151 (16) 0.0229 (17) −0.0007 (13) −0.0034 (14) −0.0069 (13)
C3 0.0178 (17) 0.0219 (17) 0.0222 (17) −0.0016 (14) −0.0015 (14) −0.0113 (14)
C4 0.0172 (17) 0.0248 (18) 0.0160 (16) −0.0001 (14) −0.0013 (13) −0.0094 (14)
C5 0.0128 (15) 0.0195 (16) 0.0155 (15) −0.0036 (13) −0.0018 (12) −0.0061 (13)
C6 0.0182 (17) 0.0178 (16) 0.0170 (16) −0.0017 (13) −0.0053 (13) −0.0076 (13)
C7 0.028 (2) 0.0244 (18) 0.0159 (16) 0.0004 (15) −0.0001 (15) −0.0068 (14)
C8 0.038 (2) 0.0246 (19) 0.0149 (16) −0.0051 (16) −0.0040 (15) −0.0046 (14)
C9 0.033 (2) 0.0175 (17) 0.0215 (18) 0.0008 (15) −0.0111 (16) −0.0038 (14)
C10 0.0255 (19) 0.0206 (17) 0.0261 (18) 0.0006 (15) −0.0077 (15) −0.0105 (15)
C11 0.0148 (16) 0.0154 (15) 0.0126 (14) −0.0040 (12) −0.0028 (12) −0.0038 (12)
C12 0.0189 (17) 0.0134 (15) 0.0138 (15) −0.0058 (13) −0.0024 (12) −0.0034 (12)
C13 0.0179 (17) 0.0167 (16) 0.0132 (15) −0.0043 (13) −0.0015 (12) −0.0042 (12)
C14 0.0142 (16) 0.0186 (16) 0.0120 (14) −0.0039 (13) −0.0017 (12) −0.0054 (12)
C15 0.0176 (16) 0.0155 (15) 0.0129 (14) −0.0064 (13) 0.0005 (12) −0.0066 (12)
C16 0.0139 (15) 0.0133 (15) 0.0117 (14) −0.0019 (12) −0.0014 (12) −0.0034 (12)
C17 0.0119 (15) 0.0186 (16) 0.0116 (14) −0.0017 (12) −0.0017 (12) −0.0065 (12)
C18 0.0146 (16) 0.0208 (17) 0.0151 (15) −0.0058 (13) −0.0010 (12) −0.0075 (13)
C19 0.0180 (17) 0.0204 (17) 0.0215 (17) −0.0031 (14) −0.0025 (14) −0.0101 (14)
C20 0.0171 (17) 0.0240 (18) 0.0190 (16) −0.0027 (14) −0.0013 (13) −0.0118 (14)
C21 0.0128 (16) 0.0245 (17) 0.0153 (16) −0.0021 (13) −0.0012 (13) −0.0083 (13)
C22 0.0168 (17) 0.0170 (16) 0.0164 (16) −0.0034 (13) −0.0006 (13) −0.0024 (13)
C23 0.0160 (16) 0.0172 (16) 0.0159 (15) −0.0028 (13) −0.0026 (13) −0.0066 (13)
C24 0.0157 (16) 0.0204 (17) 0.0177 (16) −0.0067 (13) −0.0042 (13) −0.0066 (13)
C25 0.0097 (15) 0.0285 (19) 0.0176 (16) −0.0045 (14) −0.0020 (13) −0.0077 (14)
C26 0.0128 (15) 0.0168 (15) 0.0104 (14) −0.0022 (12) −0.0010 (12) −0.0046 (12)

Geometric parameters (Å, º)

Cd1—N3 2.345 (3) C3—C4 1.384 (5)
Cd1—O3i 2.372 (2) C3—H3 0.9500
Cd1—O1 2.381 (3) C4—C5 1.401 (5)
Cd1—N1 2.391 (3) C4—H4 0.9500
Cd1—O2 2.415 (3) C5—C6 1.474 (5)
Cd1—O4i 2.422 (2) C6—C7 1.386 (5)
Cd1—N2 2.484 (3) C7—C8 1.395 (5)
S2—C23 1.739 (3) C7—H7 0.9500
S2—C24 1.763 (4) C8—C9 1.376 (5)
O1—C25 1.264 (4) C8—H8 0.9500
O2—C25 1.258 (4) C9—C10 1.376 (5)
N1—C1 1.342 (4) C9—H9 0.9500
N1—C5 1.352 (4) C10—H10 0.9500
N2—C10 1.339 (4) C11—C12 1.402 (5)
N2—C6 1.346 (4) C11—C16 1.404 (4)
N5—C24 1.316 (4) C12—C13 1.390 (5)
N5—C18 1.392 (4) C12—H12 0.9500
N6—C24 1.337 (4) C13—C14 1.396 (4)
N6—H6A 0.8800 C13—H13 0.9500
N6—H6B 0.8800 C14—C15 1.397 (5)
S1—C16 1.753 (3) C14—C26 1.500 (4)
S1—C17 1.758 (3) C15—C16 1.390 (4)
N3—C17 1.318 (4) C15—H15 0.9500
N3—C11 1.392 (4) C18—C19 1.396 (5)
N4—C17 1.340 (4) C18—C23 1.410 (5)
N4—H4A 0.8800 C19—C20 1.393 (5)
N4—H4B 0.8800 C19—H19 0.9500
O4—C26 1.258 (4) C20—C21 1.396 (5)
O4—Cd1ii 2.422 (2) C20—H20 0.9500
O3—C26 1.279 (4) C21—C22 1.401 (5)
O3—Cd1ii 2.372 (2) C21—C25 1.509 (5)
C1—C2 1.387 (5) C22—C23 1.380 (5)
C1—H1 0.9500 C22—H22 0.9500
C2—C3 1.386 (5) C26—Cd1ii 2.742 (3)
C2—H2 0.9500
N3—Cd1—O3i 153.13 (9) N1—C5—C6 116.9 (3)
N3—Cd1—O1 85.88 (10) C4—C5—C6 121.3 (3)
O3i—Cd1—O1 92.07 (9) N2—C6—C7 122.2 (3)
N3—Cd1—N1 101.19 (9) N2—C6—C5 116.1 (3)
O3i—Cd1—N1 99.05 (9) C7—C6—C5 121.7 (3)
O1—Cd1—N1 135.28 (9) C6—C7—C8 118.7 (3)
N3—Cd1—O2 110.44 (10) C6—C7—H7 120.6
O3i—Cd1—O2 89.76 (9) C8—C7—H7 120.6
O1—Cd1—O2 54.93 (9) C9—C8—C7 118.7 (3)
N1—Cd1—O2 81.78 (9) C9—C8—H8 120.6
N3—Cd1—O4i 98.05 (9) C7—C8—H8 120.6
O3i—Cd1—O4i 55.09 (8) C8—C9—C10 119.1 (3)
O1—Cd1—O4i 85.33 (9) C8—C9—H9 120.4
N1—Cd1—O4i 135.73 (9) C10—C9—H9 120.4
O2—Cd1—O4i 127.19 (9) N2—C10—C9 123.0 (3)
N3—Cd1—N2 80.49 (10) N2—C10—H10 118.5
O3i—Cd1—N2 91.08 (9) C9—C10—H10 118.5
O1—Cd1—N2 155.59 (9) N3—C11—C12 125.5 (3)
N1—Cd1—N2 67.79 (10) N3—C11—C16 115.7 (3)
O2—Cd1—N2 149.31 (9) C12—C11—C16 118.8 (3)
O4i—Cd1—N2 76.72 (9) C13—C12—C11 119.0 (3)
N3—Cd1—C25 99.34 (10) C13—C12—H12 120.5
O3i—Cd1—C25 90.67 (9) C11—C12—H12 120.5
O1—Cd1—C25 27.53 (9) C12—C13—C14 121.5 (3)
N1—Cd1—C25 108.67 (10) C12—C13—H13 119.3
O2—Cd1—C25 27.41 (10) C14—C13—H13 119.3
O4i—Cd1—C25 106.96 (10) C13—C14—C15 120.2 (3)
N2—Cd1—C25 176.27 (10) C13—C14—C26 120.0 (3)
N3—Cd1—C26i 125.36 (10) C15—C14—C26 119.8 (3)
O3i—Cd1—C26i 27.78 (9) C16—C15—C14 118.0 (3)
O1—Cd1—C26i 88.58 (10) C16—C15—H15 121.0
N1—Cd1—C26i 119.61 (9) C14—C15—H15 121.0
O2—Cd1—C26i 110.00 (10) C15—C16—C11 122.4 (3)
O4i—Cd1—C26i 27.31 (8) C15—C16—S1 128.6 (2)
N2—Cd1—C26i 83.04 (10) C11—C16—S1 109.0 (2)
C25—Cd1—C26i 99.99 (10) N3—C17—N4 125.4 (3)
C23—S2—C24 88.73 (16) N3—C17—S1 115.4 (2)
C25—O1—Cd1 92.0 (2) N4—C17—S1 119.2 (2)
C25—O2—Cd1 90.5 (2) N5—C18—C19 125.3 (3)
C1—N1—C5 118.0 (3) N5—C18—C23 115.5 (3)
C1—N1—Cd1 121.9 (2) C19—C18—C23 119.2 (3)
C5—N1—Cd1 119.2 (2) C20—C19—C18 119.2 (3)
C10—N2—C6 118.1 (3) C20—C19—H19 120.4
C10—N2—Cd1 123.5 (2) C18—C19—H19 120.4
C6—N2—Cd1 114.9 (2) C19—C20—C21 121.4 (3)
C24—N5—C18 109.9 (3) C19—C20—H20 119.3
C24—N6—H6A 120.0 C21—C20—H20 119.3
C24—N6—H6B 120.0 C20—C21—C22 119.5 (3)
H6A—N6—H6B 120.0 C20—C21—C25 120.7 (3)
C16—S1—C17 89.23 (15) C22—C21—C25 119.8 (3)
C17—N3—C11 110.7 (3) C23—C22—C21 119.3 (3)
C17—N3—Cd1 127.6 (2) C23—C22—H22 120.4
C11—N3—Cd1 121.6 (2) C21—C22—H22 120.4
C17—N4—H4A 120.0 C22—C23—C18 121.4 (3)
C17—N4—H4B 120.0 C22—C23—S2 128.8 (3)
H4A—N4—H4B 120.0 C18—C23—S2 109.7 (2)
C26—O4—Cd1ii 90.62 (19) N5—C24—N6 125.6 (3)
C26—O3—Cd1ii 92.41 (19) N5—C24—S2 116.1 (3)
N1—C1—C2 123.4 (3) N6—C24—S2 118.3 (3)
N1—C1—H1 118.3 O2—C25—O1 122.6 (3)
C2—C1—H1 118.3 O2—C25—C21 119.5 (3)
C3—C2—C1 118.6 (3) O1—C25—C21 117.9 (3)
C3—C2—H2 120.7 O2—C25—Cd1 62.11 (18)
C1—C2—H2 120.7 O1—C25—Cd1 60.52 (18)
C4—C3—C2 118.8 (3) C21—C25—Cd1 178.2 (2)
C4—C3—H3 120.6 O4—C26—O3 121.9 (3)
C2—C3—H3 120.6 O4—C26—C14 119.2 (3)
C3—C4—C5 119.5 (3) O3—C26—C14 118.9 (3)
C3—C4—H4 120.3 O4—C26—Cd1ii 62.07 (17)
C5—C4—H4 120.3 O3—C26—Cd1ii 59.82 (16)
N1—C5—C4 121.7 (3) C14—C26—Cd1ii 178.6 (2)
N3—Cd1—O1—C25 119.4 (2) C17—N3—C11—C12 178.7 (3)
O3i—Cd1—O1—C25 −87.5 (2) Cd1—N3—C11—C12 2.8 (4)
N1—Cd1—O1—C25 17.6 (3) C17—N3—C11—C16 −1.3 (4)
O2—Cd1—O1—C25 0.78 (19) Cd1—N3—C11—C16 −177.1 (2)
O4i—Cd1—O1—C25 −142.2 (2) N3—C11—C12—C13 179.8 (3)
N2—Cd1—O1—C25 175.3 (2) C16—C11—C12—C13 −0.3 (5)
C26i—Cd1—O1—C25 −115.0 (2) C11—C12—C13—C14 −1.7 (5)
N3—Cd1—O2—C25 −70.0 (2) C12—C13—C14—C15 2.1 (5)
O3i—Cd1—O2—C25 91.9 (2) C12—C13—C14—C26 −177.5 (3)
O1—Cd1—O2—C25 −0.78 (19) C13—C14—C15—C16 −0.4 (5)
N1—Cd1—O2—C25 −168.9 (2) C26—C14—C15—C16 179.3 (3)
O4i—Cd1—O2—C25 48.1 (2) C14—C15—C16—C11 −1.7 (5)
N2—Cd1—O2—C25 −176.38 (19) C14—C15—C16—S1 177.6 (2)
C26i—Cd1—O2—C25 72.5 (2) N3—C11—C16—C15 −178.1 (3)
N3—Cd1—N1—C1 −120.1 (2) C12—C11—C16—C15 2.0 (5)
O3i—Cd1—N1—C1 77.7 (2) N3—C11—C16—S1 2.6 (3)
O1—Cd1—N1—C1 −24.6 (3) C12—C11—C16—S1 −177.4 (2)
O2—Cd1—N1—C1 −10.7 (2) C17—S1—C16—C15 178.3 (3)
O4i—Cd1—N1—C1 125.9 (2) C17—S1—C16—C11 −2.4 (2)
N2—Cd1—N1—C1 165.2 (3) C11—N3—C17—N4 178.8 (3)
C25—Cd1—N1—C1 −16.1 (3) Cd1—N3—C17—N4 −5.6 (5)
C26i—Cd1—N1—C1 97.6 (3) C11—N3—C17—S1 −0.7 (3)
N3—Cd1—N1—C5 71.2 (2) Cd1—N3—C17—S1 174.85 (14)
O3i—Cd1—N1—C5 −91.0 (2) C16—S1—C17—N3 1.8 (3)
O1—Cd1—N1—C5 166.7 (2) C16—S1—C17—N4 −177.7 (3)
O2—Cd1—N1—C5 −179.5 (2) C24—N5—C18—C19 177.1 (3)
O4i—Cd1—N1—C5 −42.9 (3) C24—N5—C18—C23 −1.9 (4)
N2—Cd1—N1—C5 −3.6 (2) N5—C18—C19—C20 −178.1 (3)
C25—Cd1—N1—C5 175.2 (2) C23—C18—C19—C20 0.9 (5)
C26i—Cd1—N1—C5 −71.1 (3) C18—C19—C20—C21 −0.3 (5)
N3—Cd1—N2—C10 67.9 (3) C19—C20—C21—C22 −0.6 (5)
O3i—Cd1—N2—C10 −86.4 (3) C19—C20—C21—C25 179.3 (3)
O1—Cd1—N2—C10 11.0 (4) C20—C21—C22—C23 0.8 (5)
N1—Cd1—N2—C10 174.2 (3) C25—C21—C22—C23 −179.0 (3)
O2—Cd1—N2—C10 −177.8 (2) C21—C22—C23—C18 −0.2 (5)
O4i—Cd1—N2—C10 −32.8 (3) C21—C22—C23—S2 176.9 (3)
C25—Cd1—N2—C10 155.6 (14) N5—C18—C23—C22 178.5 (3)
C26i—Cd1—N2—C10 −59.8 (3) C19—C18—C23—C22 −0.6 (5)
N3—Cd1—N2—C6 −90.6 (2) N5—C18—C23—S2 0.8 (4)
O3i—Cd1—N2—C6 115.1 (2) C19—C18—C23—S2 −178.3 (3)
O1—Cd1—N2—C6 −147.5 (2) C24—S2—C23—C22 −177.1 (3)
N1—Cd1—N2—C6 15.7 (2) C24—S2—C23—C18 0.3 (3)
O2—Cd1—N2—C6 23.7 (3) C18—N5—C24—N6 −178.6 (3)
O4i—Cd1—N2—C6 168.7 (2) C18—N5—C24—S2 2.2 (4)
C25—Cd1—N2—C6 −2.9 (16) C23—S2—C24—N5 −1.5 (3)
C26i—Cd1—N2—C6 141.7 (2) C23—S2—C24—N6 179.2 (3)
O3i—Cd1—N3—C17 0.5 (4) Cd1—O2—C25—O1 1.4 (3)
O1—Cd1—N3—C17 86.9 (3) Cd1—O2—C25—C21 −179.1 (3)
N1—Cd1—N3—C17 −137.7 (3) Cd1—O1—C25—O2 −1.5 (3)
O2—Cd1—N3—C17 137.0 (3) Cd1—O1—C25—C21 179.1 (3)
O4i—Cd1—N3—C17 2.3 (3) C20—C21—C25—O2 11.1 (5)
N2—Cd1—N3—C17 −72.7 (3) C22—C21—C25—O2 −169.0 (3)
C25—Cd1—N3—C17 111.0 (3) C20—C21—C25—O1 −169.4 (3)
C26i—Cd1—N3—C17 1.6 (3) C22—C21—C25—O1 10.4 (5)
O3i—Cd1—N3—C11 175.6 (2) C20—C21—C25—Cd1 −144 (8)
O1—Cd1—N3—C11 −97.9 (2) C22—C21—C25—Cd1 36 (8)
N1—Cd1—N3—C11 37.5 (2) N3—Cd1—C25—O2 116.9 (2)
O2—Cd1—N3—C11 −47.8 (2) O3i—Cd1—C25—O2 −88.2 (2)
O4i—Cd1—N3—C11 177.4 (2) O1—Cd1—C25—O2 178.6 (3)
N2—Cd1—N3—C11 102.4 (2) N1—Cd1—C25—O2 11.6 (2)
C25—Cd1—N3—C11 −73.8 (2) O4i—Cd1—C25—O2 −141.69 (19)
C26i—Cd1—N3—C11 176.8 (2) N2—Cd1—C25—O2 29.8 (16)
C5—N1—C1—C2 1.7 (5) C26i—Cd1—C25—O2 −114.5 (2)
Cd1—N1—C1—C2 −167.2 (3) N3—Cd1—C25—O1 −61.8 (2)
N1—C1—C2—C3 −0.4 (5) O3i—Cd1—C25—O1 93.2 (2)
C1—C2—C3—C4 −1.3 (5) N1—Cd1—C25—O1 −167.02 (19)
C2—C3—C4—C5 1.8 (5) O2—Cd1—C25—O1 −178.6 (3)
C1—N1—C5—C4 −1.2 (5) O4i—Cd1—C25—O1 39.7 (2)
Cd1—N1—C5—C4 168.0 (2) N2—Cd1—C25—O1 −148.9 (14)
C1—N1—C5—C6 −177.1 (3) C26i—Cd1—C25—O1 66.9 (2)
Cd1—N1—C5—C6 −8.0 (4) N3—Cd1—C25—C21 −88 (8)
C3—C4—C5—N1 −0.5 (5) O3i—Cd1—C25—C21 67 (8)
C3—C4—C5—C6 175.2 (3) O1—Cd1—C25—C21 −26 (8)
C10—N2—C6—C7 −3.6 (5) N1—Cd1—C25—C21 167 (8)
Cd1—N2—C6—C7 156.1 (3) O2—Cd1—C25—C21 155 (8)
C10—N2—C6—C5 174.5 (3) O4i—Cd1—C25—C21 14 (8)
Cd1—N2—C6—C5 −25.7 (4) N2—Cd1—C25—C21 −175 (7)
N1—C5—C6—N2 23.0 (4) C26i—Cd1—C25—C21 41 (8)
C4—C5—C6—N2 −153.0 (3) Cd1ii—O4—C26—O3 −0.3 (3)
N1—C5—C6—C7 −158.8 (3) Cd1ii—O4—C26—C14 −179.3 (2)
C4—C5—C6—C7 25.2 (5) Cd1ii—O3—C26—O4 0.3 (3)
N2—C6—C7—C8 2.2 (6) Cd1ii—O3—C26—C14 179.3 (2)
C5—C6—C7—C8 −175.8 (3) C13—C14—C26—O4 178.0 (3)
C6—C7—C8—C9 1.1 (6) C15—C14—C26—O4 −1.6 (4)
C7—C8—C9—C10 −2.8 (6) C13—C14—C26—O3 −1.0 (4)
C6—N2—C10—C9 1.7 (5) C15—C14—C26—O3 179.4 (3)
Cd1—N2—C10—C9 −156.1 (3) C13—C14—C26—Cd1ii 25 (9)
C8—C9—C10—N2 1.5 (6) C15—C14—C26—Cd1ii −155 (9)

Symmetry codes: (i) x+1, y, z; (ii) x−1, y, z.

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N6—H6A···O3iii 0.88 2.10 2.917 (4) 155
N6—H6B···O3iv 0.88 2.12 2.996 (4) 173
N4—H4A···O4i 0.88 2.25 3.101 (4) 162
N4—H4B···N5v 0.88 2.21 3.066 (4) 163

Symmetry codes: (i) x+1, y, z; (iii) −x, −y+2, −z−1; (iv) x+1, y, z−1; (v) x, y−1, z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB6715).

References

  1. Das, J., Lin, J., Moquin, R. V., Shen, Z., Spergel, S. H., Wityak, J., Doweyko, A. M., DeFex, H. F., Fang, Q., Pang, S., Pitt, S., Shen, D. R., Schieven, G. L. & Barrish, J. C. (2003). Bioorg. Med. Chem. Lett. 13, 2145–2149. [DOI] [PubMed]
  2. Fang, X., Lei, C., Yu, H.-Y., Huang, M.-D. & Wang, J.-D. (2010). Acta Cryst. E66, o1239–o1240. [DOI] [PMC free article] [PubMed]
  3. Higashi, T. (2000). NUMABS Rigaku Corporation, Tokyo, Japan.
  4. Lei, C., Fang, X., Yu, H.-Y., Huang, M.-D. & Wang, J.-D. (2010). Acta Cryst. E66, o914. [DOI] [PMC free article] [PubMed]
  5. McArdle, P. (1995). J. Appl. Cryst. 28, 65. [DOI] [PMC free article] [PubMed]
  6. Rigaku (2007). CrystalClear Rigaku Corporation, Tokyo, Japan.
  7. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681201642X/hb6715sup1.cif

e-68-0m641-sup1.cif (29.6KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681201642X/hb6715Isup2.hkl

e-68-0m641-Isup2.hkl (259.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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