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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Apr 21;68(Pt 5):o1499. doi: 10.1107/S1600536812015620

N-(3-Hy­droxy­phen­yl)nicotinamide

Chunhua Ge a, Rui Zhang a,*, Xiangdong Zhang a, Chenglong Zhang a, Meiyin Zhang a
PMCID: PMC3344608  PMID: 22590370

Abstract

In the title mol­ecule, C12H10N2O2, the benzene and pyridine rings form a dihedral angle of 5.01 (8)°. The amide group is twisted by 33.54 (7)° from the plane of the pyridine ring. In the crystal, mol­ecules are linked into centrosymmetric dimers via pairs of O—H⋯N hydrogen bonds. N—H⋯O hydrogen bonds further link dimers related into chains along the b axis.

Related literature  

For related structures, see: Mocilac & Gallagher (2011); Roopan et al. (2009). For modern aspects of boronic acid derivatives, see: Hall (2005).graphic file with name e-68-o1499-scheme1.jpg

Experimental  

Crystal data  

  • C12H10N2O2

  • M r = 214.22

  • Monoclinic, Inline graphic

  • a = 12.1741 (13) Å

  • b = 5.2613 (6) Å

  • c = 15.3113 (16) Å

  • β = 94.428 (2)°

  • V = 977.79 (18) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.10 mm−1

  • T = 293 K

  • 0.35 × 0.20 × 0.18 mm

Data collection  

  • Bruker SMART CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2001) T min = 0.952, T max = 0.988

  • 5813 measured reflections

  • 1928 independent reflections

  • 1572 reflections with I > 2σ(I)

  • R int = 0.022

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.040

  • wR(F 2) = 0.098

  • S = 1.04

  • 1928 reflections

  • 150 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.31 e Å−3

  • Δρmin = −0.17 e Å−3

Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97, PLATON (Spek, 2009) and WinGX (Farrugia, 1999).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812015620/cv5281sup1.cif

e-68-o1499-sup1.cif (14.6KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812015620/cv5281Isup2.hkl

e-68-o1499-Isup2.hkl (94.9KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812015620/cv5281Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O2—H2B⋯N1i 0.82 2.00 2.817 (2) 173
N2—H2A⋯O1ii 0.83 (2) 2.29 (2) 3.107 (2) 166

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

This work was supported by the National Natural Science Foundation of China (grant Nos. 20971062 and 21171081) and the Foundation of the 211 Project for Innovative Talents Training, Liaoning University.

supplementary crystallographic information

Comment

Organoboronic acid derivatives have recently received increasing interest in a broad range of biological, medicinal, and synthetic applications (Hall, 2005). Especially, such compounds have been utilized as synthetic intermediates. For example, the famous Suzuki reaction is the coupling of organoboronic acid with aryl halide. Boronic acid containing compounds employed in the cross coupling must be activated by using palladium catalyst. Other metal ion could make boronic acid in the different transformational mode.

The title compound, N-(3-hydroxyphenyl)nicotinamide, is obtained by reaction of N-(3-phenylboronic acid)nicotinamide with copper(II) ion. The molecular structure is shown in Fig. 1. Conformational studies show that substituent of the phenyl ring is one of key factors for solid state molecular conformations and supramolecular aggregation. Comparisons between N-phenylnicotinamide and N-(3-hydroxyphenyl)nicotinamide reveal that the dihedral angle between the phenyl and pyridine rings is 64.81 (1) ° (Roopan et al., 2009) in the former and 5.02 (8) ° in the latter. This value in N-(3-methylphenyl)nicotinamide is 57.23 (6) ° (Mocilac & Gallagher, 2011). Oxygen atom from amide group and nitrogen atom from pyridine ring in N-phenylnicotinamide are on the same side of the molecule. The distribution of corresponding atoms in N-(3-methylphenyl)nicotinamide is similar to that of N-phenylnicotinamide, but contrary to that of N-(3-hydroxyphenyl)nicotinamide.

In the crystal structure, the molecules are paired into centrosymmetric dimers via O—H···N hydrogen bonds (Table 1). Intermolecular N—H···O hydrogen bonds (Table 1) link further these dimers related be translation along axis b into chains.

Experimental

N-(3-Phenylboronic acid)nicotinamide (10 mmol) was added to 20 ml e thanol-water(v:v=8:2), followed by the dropwise addition of copper nitrate(5 mmol) in 5 ml water. The mixture was stirred at room temperature for 8 h. After filtered, the filtrate was evaporated. Crystals were obtained after about two weeks.

Refinement

The amide H atom was located in Fourier different map and refined isotropically. All other H atoms were placed in geometrically idealized positions (Csp2—H = 0.93, and O—H = 0.82) and refined as riding, with Uiso(H) = 1.2Ueq(C) and Uiso(H) = 1.5Ueq(O).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level.

Crystal data

C12H10N2O2 F(000) = 448
Mr = 214.22 Dx = 1.455 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 82 reflections
a = 12.1741 (13) Å θ = 2.2–23.3°
b = 5.2613 (6) Å µ = 0.10 mm1
c = 15.3113 (16) Å T = 293 K
β = 94.428 (2)° Block, colourless
V = 977.79 (18) Å3 0.35 × 0.20 × 0.18 mm
Z = 4

Data collection

Bruker SMART CCD area-detector diffractometer 1928 independent reflections
Radiation source: fine-focus sealed tube 1572 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.022
φ and ω scans θmax = 26.1°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Bruker, 2001) h = −15→15
Tmin = 0.952, Tmax = 0.988 k = −6→4
5813 measured reflections l = −18→18

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.098 H atoms treated by a mixture of independent and constrained refinement
S = 1.04 w = 1/[σ2(Fo2) + (0.0441P)2 + 0.3178P] where P = (Fo2 + 2Fc2)/3
1928 reflections (Δ/σ)max < 0.001
150 parameters Δρmax = 0.31 e Å3
0 restraints Δρmin = −0.17 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O2 0.10112 (9) 0.0774 (2) 0.89614 (8) 0.0393 (3)
H2B 0.1369 −0.0179 0.9298 0.059*
N2 0.46607 (10) 0.4089 (3) 0.86950 (8) 0.0293 (3)
C12 0.28388 (12) 0.2438 (3) 0.88031 (10) 0.0289 (3)
H12 0.3155 0.1113 0.9137 0.035*
O1 0.51225 (9) 0.8283 (2) 0.87911 (8) 0.0403 (3)
C5 0.73908 (12) 0.6822 (3) 0.88082 (10) 0.0309 (4)
H5 0.7221 0.8299 0.8493 0.037*
N1 0.79027 (10) 0.2474 (3) 0.97897 (9) 0.0327 (3)
C11 0.17038 (12) 0.2524 (3) 0.86264 (10) 0.0310 (4)
C6 0.53822 (12) 0.6020 (3) 0.88392 (10) 0.0279 (3)
C2 0.86888 (13) 0.3961 (3) 0.95025 (10) 0.0339 (4)
H2 0.9420 0.3493 0.9632 0.041*
C9 0.19122 (13) 0.6308 (3) 0.77876 (10) 0.0354 (4)
H9 0.1596 0.7605 0.7441 0.042*
C8 0.30484 (13) 0.6289 (3) 0.79759 (10) 0.0310 (4)
H8 0.3490 0.7560 0.7767 0.037*
C4 0.65565 (12) 0.5257 (3) 0.90684 (9) 0.0267 (3)
C7 0.35048 (12) 0.4310 (3) 0.84863 (9) 0.0267 (3)
C1 0.84752 (13) 0.6154 (3) 0.90241 (11) 0.0349 (4)
H1 0.9048 0.7159 0.8851 0.042*
C3 0.68548 (12) 0.3122 (3) 0.95639 (10) 0.0307 (4)
H3 0.6298 0.2087 0.9749 0.037*
C10 0.12390 (13) 0.4454 (3) 0.81013 (10) 0.0349 (4)
H10 0.0482 0.4501 0.7962 0.042*
H2A 0.4898 (13) 0.261 (4) 0.8741 (10) 0.030 (5)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O2 0.0341 (6) 0.0315 (7) 0.0528 (8) 0.0008 (5) 0.0074 (5) 0.0036 (5)
N2 0.0292 (7) 0.0198 (7) 0.0385 (8) 0.0021 (6) −0.0012 (5) 0.0000 (6)
C12 0.0318 (8) 0.0221 (8) 0.0323 (8) 0.0038 (6) −0.0013 (6) −0.0014 (6)
O1 0.0347 (6) 0.0231 (6) 0.0624 (8) 0.0011 (5) −0.0004 (5) −0.0003 (5)
C5 0.0350 (8) 0.0266 (8) 0.0311 (8) −0.0025 (7) 0.0027 (6) 0.0010 (6)
N1 0.0306 (7) 0.0273 (7) 0.0396 (7) 0.0001 (6) −0.0012 (6) −0.0012 (6)
C11 0.0303 (8) 0.0270 (8) 0.0360 (8) −0.0001 (7) 0.0037 (6) −0.0074 (7)
C6 0.0301 (8) 0.0238 (8) 0.0298 (8) 0.0004 (6) 0.0027 (6) −0.0003 (6)
C2 0.0276 (8) 0.0333 (9) 0.0402 (9) 0.0008 (7) −0.0006 (7) −0.0051 (7)
C9 0.0422 (9) 0.0320 (9) 0.0311 (8) 0.0121 (8) −0.0025 (7) −0.0001 (7)
C8 0.0366 (8) 0.0268 (8) 0.0294 (8) 0.0010 (7) 0.0007 (6) −0.0011 (6)
C4 0.0299 (8) 0.0228 (8) 0.0274 (7) 0.0000 (6) 0.0023 (6) −0.0049 (6)
C7 0.0283 (7) 0.0229 (8) 0.0284 (7) 0.0021 (6) −0.0002 (6) −0.0044 (6)
C1 0.0301 (8) 0.0372 (9) 0.0381 (9) −0.0065 (7) 0.0062 (7) −0.0026 (7)
C3 0.0295 (8) 0.0266 (8) 0.0360 (8) −0.0034 (6) 0.0021 (6) −0.0018 (7)
C10 0.0289 (8) 0.0383 (10) 0.0370 (9) 0.0070 (7) −0.0010 (7) −0.0069 (7)

Geometric parameters (Å, º)

O2—C11 1.3741 (19) C11—C10 1.388 (2)
O2—H2B 0.8200 C6—C4 1.500 (2)
N2—C6 1.350 (2) C2—C1 1.381 (2)
N2—C7 1.4234 (19) C2—H2 0.9300
N2—H2A 0.831 (18) C9—C10 1.384 (2)
C12—C7 1.387 (2) C9—C8 1.391 (2)
C12—C11 1.388 (2) C9—H9 0.9300
C12—H12 0.9300 C8—C7 1.391 (2)
O1—C6 1.2325 (18) C8—H8 0.9300
C5—C1 1.381 (2) C4—C3 1.388 (2)
C5—C4 1.389 (2) C1—H1 0.9300
C5—H5 0.9300 C3—H3 0.9300
N1—C2 1.336 (2) C10—H10 0.9300
N1—C3 1.3396 (19)
C11—O2—H2B 109.5 C10—C9—H9 119.0
C6—N2—C7 126.48 (14) C8—C9—H9 119.0
C6—N2—H2A 118.2 (12) C9—C8—C7 117.99 (15)
C7—N2—H2A 115.3 (11) C9—C8—H8 121.0
C7—C12—C11 120.56 (14) C7—C8—H8 121.0
C7—C12—H12 119.7 C3—C4—C5 118.02 (14)
C11—C12—H12 119.7 C3—C4—C6 123.28 (13)
C1—C5—C4 119.16 (15) C5—C4—C6 118.62 (14)
C1—C5—H5 120.4 C12—C7—C8 120.59 (14)
C4—C5—H5 120.4 C12—C7—N2 117.24 (13)
C2—N1—C3 117.27 (14) C8—C7—N2 122.16 (14)
O2—C11—C12 122.38 (14) C2—C1—C5 118.47 (15)
O2—C11—C10 118.15 (14) C2—C1—H1 120.8
C12—C11—C10 119.47 (14) C5—C1—H1 120.8
O1—C6—N2 123.82 (14) N1—C3—C4 123.40 (14)
O1—C6—C4 120.52 (14) N1—C3—H3 118.3
N2—C6—C4 115.67 (13) C4—C3—H3 118.3
N1—C2—C1 123.60 (15) C9—C10—C11 119.38 (14)
N1—C2—H2 118.2 C9—C10—H10 120.3
C1—C2—H2 118.2 C11—C10—H10 120.3
C10—C9—C8 121.96 (15)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
O2—H2B···N1i 0.82 2.00 2.817 (2) 173
N2—H2A···O1ii 0.83 (2) 2.29 (2) 3.107 (2) 166

Symmetry codes: (i) −x+1, −y, −z+2; (ii) x, y−1, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: CV5281).

References

  1. Bruker (2001). SMART, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838.
  3. Hall, D. G. (2005). Editor. Boronic Acids. Preparation and Application in Organic Synthesis and Medicine Weinheim: Wiley VCH.
  4. Mocilac, P. & Gallagher, J. F. (2011). CrystEngComm, 13, 5354–5366.
  5. Roopan, S. M., Hathwar, V. R., Kumar, A. S., Malathi, N. & Khan, F. N. (2009). Acta Cryst. E65, o571. [DOI] [PMC free article] [PubMed]
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812015620/cv5281sup1.cif

e-68-o1499-sup1.cif (14.6KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812015620/cv5281Isup2.hkl

e-68-o1499-Isup2.hkl (94.9KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812015620/cv5281Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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