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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Apr 28;68(Pt 5):o1578. doi: 10.1107/S1600536812016947

N-(2-Nitro­phenyl­carbamothio­yl)acetamide

Durre Shahwar a, M Nawaz Tahir b,*, Muhammad Mansha Chohan a, Muhammad Akmal Khan a, Nadeem Ahmad c
PMCID: PMC3344673  PMID: 22590435

Abstract

In the title compound, C9H9N3O3S, the benzene ring and the N-carbamothio­ylacetamide unit are oriented at a dihedral angle of 54.82 (4)°. The dihedral angle between the ring and its attached nitro group is 28.54 (12)°. An intra­molecular, bifurcated N—H⋯(O,O) hydrogen bond generates two S(6) rings. In the crystal, inversion dimers linked by pairs of N—H⋯S hydrogen bonds generate R 2 2(8) loops. Weak C—H⋯O inter­actions link the dimers.

Related literature  

For related structures, see: Shahwar et al. (2012a,b ,c ). For graph–set notation, see: Bernstein et al. (1995).graphic file with name e-68-o1578-scheme1.jpg

Experimental  

Crystal data  

  • C9H9N3O3S

  • M r = 239.25

  • Monoclinic, Inline graphic

  • a = 4.1992 (1) Å

  • b = 11.6081 (3) Å

  • c = 22.1035 (6) Å

  • β = 94.815 (1)°

  • V = 1073.63 (5) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.30 mm−1

  • T = 296 K

  • 0.35 × 0.15 × 0.13 mm

Data collection  

  • Bruker Kappa APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2005) T min = 0.945, T max = 0.965

  • 10065 measured reflections

  • 2711 independent reflections

  • 1969 reflections with I > 2σ(I)

  • R int = 0.029

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.039

  • wR(F 2) = 0.105

  • S = 1.01

  • 2711 reflections

  • 146 parameters

  • H-atom parameters constrained

  • Δρmax = 0.22 e Å−3

  • Δρmin = −0.22 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812016947/hb6744sup1.cif

e-68-o1578-sup1.cif (19.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812016947/hb6744Isup2.hkl

e-68-o1578-Isup2.hkl (130.4KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812016947/hb6744Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N2—H2⋯O1 0.86 2.23 2.661 (2) 111
N2—H2⋯O3 0.86 1.93 2.630 (2) 137
N3—H3A⋯S1i 0.86 2.59 3.4371 (14) 168
C9—H9C⋯O2ii 0.96 2.51 3.428 (3) 161

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors acknowledge the provision of funds for the purchase of a diffractometer and encouragement by Dr Muhammad Akram Chaudhary, Vice Chancellor, University of Sargodha, Pakistan. The authors also acknowledge the technical support provided by Syed Muhammad Hussain Rizvi of Bana Inter­national, Karachi, Pakistan.

supplementary crystallographic information

Comment

The title compound I (Fig. 1) is in continuation to synthesize different derivatives of N-carbamothioylacetamide.

We have reported the crystal structures of N-(2-methylphenylcarbamothioyl)acetamide (Shahwar et al., 2012a), N-(3-chlorophenylcarbamothioyl)acetamide (Shahwar et al., 2012b) and N-(phenylcarbamothioyl)acetamide (Shahwar et al., 2012c) which are related to the (I).

In (I), the phenyl ring A (C1–C6) and the N-carbamothioylacetamide moiety B (N2/C7/S1/N3/C8/O3/C9) are planar with r. m. s. deviation of 0.0028 Å and 0.0181 Å, respectively. The dihedral angle between A/B is 54.82 (4)°. The nitro group C (O1/N1/O2) is of course planar. The dihedral angle between A/C and B/C are 28.68 (18) and 66.59 (12)°, respectively. There exist intramolecular H–bonding of N—H···O type (Table 1, Fig. 1) with two S(6) ring motifs (Bernstein et al., 1995). The molecules are dimerized due to N—H···S type of hydrogen bonds with R22(8) ring motifs (Table 1, Fig. 2). The dimers are interlinked from CH3 groups due to C—H···O H–bondings (Table 1, Fig. 2) with nitro groups.

Experimental

Acetylchloride (0.1 mol, 7.13 ml) was added dropwise to a stirred solution of KSCN (0.11 mol) in dry acetone (50 ml), followed by slow addition of 2-nitroaniline (0.1 mol) in dry acetone (25 ml). The mixture was refluxed for 5–10 min, then poured on ice cooled water, which resulted in crude precipitate. Recrystallization of the precipitate from ethylacetate yielded colourless needles.

Refinement

The H-atoms were positioned geometrically (C—H = 0.93–0.96 Å, N—H = 0.86 Å) and refined as riding with Uiso(H) = xUeq(C, N), where x = 1.5 for methyl groups and x = 1.2 for other H atoms.

Figures

Fig. 1.

Fig. 1.

View of the title compound with displacement ellipsoids drawn at the 50% probability level. The dotted lines represent the intra-molecular H-bondings.

Fig. 2.

Fig. 2.

Partial packing diagram showing inversion dimers linked by pairs of N—H···S hydrogen bonds with R22(8) ring motifs.

Crystal data

C9H9N3O3S F(000) = 496
Mr = 239.25 Dx = 1.480 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 1969 reflections
a = 4.1992 (1) Å θ = 1.9–28.4°
b = 11.6081 (3) Å µ = 0.30 mm1
c = 22.1035 (6) Å T = 296 K
β = 94.815 (1)° Needle, colourless
V = 1073.63 (5) Å3 0.35 × 0.15 × 0.13 mm
Z = 4

Data collection

Bruker Kappa APEXII CCD diffractometer 2711 independent reflections
Radiation source: fine-focus sealed tube 1969 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.029
Detector resolution: 7.50 pixels mm-1 θmax = 28.4°, θmin = 1.9°
ω scans h = −5→5
Absorption correction: multi-scan (SADABS; Bruker, 2005) k = −15→15
Tmin = 0.945, Tmax = 0.965 l = −29→29
10065 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.105 H-atom parameters constrained
S = 1.01 w = 1/[σ2(Fo2) + (0.0428P)2 + 0.3324P] where P = (Fo2 + 2Fc2)/3
2711 reflections (Δ/σ)max < 0.001
146 parameters Δρmax = 0.22 e Å3
0 restraints Δρmin = −0.22 e Å3

Special details

Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
S1 1.09141 (12) 0.18209 (4) 0.01646 (2) 0.0470 (2)
O1 1.0422 (5) 0.23102 (15) 0.24000 (7) 0.0772 (7)
O2 1.4312 (4) 0.3495 (2) 0.25974 (8) 0.1053 (8)
O3 0.5502 (4) 0.04876 (12) 0.17207 (6) 0.0676 (5)
N1 1.1962 (4) 0.31649 (18) 0.22843 (7) 0.0608 (6)
N2 0.8449 (4) 0.22014 (12) 0.12253 (6) 0.0441 (5)
N3 0.7962 (3) 0.03702 (12) 0.08415 (6) 0.0405 (4)
C1 0.9181 (4) 0.33887 (14) 0.12522 (7) 0.0402 (5)
C2 1.0856 (4) 0.38734 (16) 0.17587 (8) 0.0465 (6)
C3 1.1536 (5) 0.50364 (19) 0.17923 (11) 0.0654 (8)
C4 1.0529 (6) 0.57302 (19) 0.13141 (12) 0.0763 (9)
C5 0.8855 (6) 0.52747 (18) 0.08093 (11) 0.0678 (8)
C6 0.8168 (5) 0.41127 (16) 0.07781 (9) 0.0537 (7)
C7 0.9000 (4) 0.14835 (14) 0.07749 (7) 0.0369 (5)
C8 0.6239 (4) −0.00808 (16) 0.12923 (8) 0.0449 (6)
C9 0.5378 (5) −0.13221 (17) 0.12095 (8) 0.0522 (6)
H2 0.75624 0.19142 0.15281 0.0529*
H3 1.26623 0.53434 0.21351 0.0785*
H3A 0.84485 −0.01078 0.05666 0.0485*
H4 1.09789 0.65145 0.13307 0.0915*
H5 0.81794 0.57530 0.04862 0.0814*
H6 0.70161 0.38146 0.04358 0.0645*
H9A 0.72667 −0.17858 0.12780 0.0784*
H9B 0.44403 −0.14442 0.08033 0.0784*
H9C 0.38729 −0.15343 0.14937 0.0784*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.0619 (3) 0.0391 (2) 0.0416 (3) −0.0060 (2) 0.0135 (2) −0.0040 (2)
O1 0.1231 (15) 0.0614 (10) 0.0455 (9) 0.0175 (10) −0.0028 (9) 0.0020 (7)
O2 0.0672 (11) 0.177 (2) 0.0673 (11) 0.0072 (12) −0.0204 (9) −0.0075 (12)
O3 0.0970 (11) 0.0569 (9) 0.0533 (8) −0.0117 (8) 0.0325 (8) −0.0063 (7)
N1 0.0646 (11) 0.0792 (13) 0.0381 (9) 0.0208 (10) 0.0014 (8) −0.0132 (9)
N2 0.0628 (9) 0.0352 (7) 0.0350 (8) 0.0011 (7) 0.0087 (7) −0.0019 (6)
N3 0.0512 (8) 0.0335 (7) 0.0371 (7) 0.0002 (6) 0.0064 (6) −0.0022 (6)
C1 0.0491 (10) 0.0345 (9) 0.0375 (9) 0.0039 (7) 0.0063 (7) −0.0051 (7)
C2 0.0500 (10) 0.0498 (10) 0.0401 (9) 0.0066 (8) 0.0066 (8) −0.0085 (8)
C3 0.0704 (14) 0.0558 (13) 0.0700 (14) −0.0081 (11) 0.0060 (11) −0.0250 (11)
C4 0.0957 (18) 0.0385 (11) 0.0970 (19) −0.0106 (11) 0.0224 (15) −0.0133 (12)
C5 0.0949 (17) 0.0420 (11) 0.0676 (14) 0.0081 (11) 0.0134 (13) 0.0081 (10)
C6 0.0704 (13) 0.0411 (10) 0.0488 (11) 0.0069 (9) −0.0004 (9) −0.0004 (8)
C7 0.0411 (9) 0.0341 (8) 0.0345 (8) 0.0033 (7) −0.0026 (7) −0.0017 (6)
C8 0.0503 (10) 0.0454 (10) 0.0390 (9) −0.0017 (8) 0.0033 (8) 0.0036 (8)
C9 0.0594 (12) 0.0500 (11) 0.0470 (10) −0.0126 (9) 0.0031 (9) 0.0041 (8)

Geometric parameters (Å, º)

S1—C7 1.6737 (17) C2—C3 1.381 (3)
O1—N1 1.223 (3) C3—C4 1.367 (3)
O2—N1 1.219 (2) C4—C5 1.374 (4)
O3—C8 1.215 (2) C5—C6 1.380 (3)
N1—C2 1.467 (2) C8—C9 1.493 (3)
N2—C1 1.412 (2) C3—H3 0.9300
N2—C7 1.333 (2) C4—H4 0.9300
N3—C7 1.376 (2) C5—H5 0.9300
N3—C8 1.383 (2) C6—H6 0.9300
N2—H2 0.8600 C9—H9A 0.9600
N3—H3A 0.8600 C9—H9B 0.9600
C1—C6 1.382 (3) C9—H9C 0.9600
C1—C2 1.390 (2)
O1—N1—O2 123.61 (19) S1—C7—N3 118.95 (12)
O1—N1—C2 118.86 (16) N2—C7—N3 115.52 (14)
O2—N1—C2 117.45 (19) O3—C8—C9 123.00 (17)
C1—N2—C7 126.20 (14) N3—C8—C9 114.40 (15)
C7—N3—C8 128.50 (14) O3—C8—N3 122.61 (17)
C1—N2—H2 117.00 C2—C3—H3 120.00
C7—N2—H2 117.00 C4—C3—H3 120.00
C7—N3—H3A 116.00 C3—C4—H4 120.00
C8—N3—H3A 116.00 C5—C4—H4 120.00
N2—C1—C2 121.50 (15) C4—C5—H5 120.00
N2—C1—C6 120.62 (15) C6—C5—H5 120.00
C2—C1—C6 117.85 (16) C1—C6—H6 120.00
C1—C2—C3 121.84 (18) C5—C6—H6 120.00
N1—C2—C1 121.07 (16) C8—C9—H9A 109.00
N1—C2—C3 117.09 (17) C8—C9—H9B 109.00
C2—C3—C4 119.0 (2) C8—C9—H9C 109.00
C3—C4—C5 120.3 (2) H9A—C9—H9B 109.00
C4—C5—C6 120.5 (2) H9A—C9—H9C 109.00
C1—C6—C5 120.45 (19) H9B—C9—H9C 109.00
S1—C7—N2 125.50 (13)
O1—N1—C2—C3 149.7 (2) C6—C1—C2—N1 178.95 (17)
O1—N1—C2—C1 −30.0 (3) C6—C1—C2—C3 −0.7 (3)
O2—N1—C2—C1 153.06 (19) N2—C1—C6—C5 179.21 (19)
O2—N1—C2—C3 −27.3 (3) C2—C1—C6—C5 0.9 (3)
C7—N2—C1—C2 −129.53 (19) N2—C1—C2—N1 0.7 (3)
C7—N2—C1—C6 52.2 (3) N2—C1—C2—C3 −178.95 (17)
C1—N2—C7—S1 4.5 (3) N1—C2—C3—C4 −179.54 (19)
C1—N2—C7—N3 −177.62 (15) C1—C2—C3—C4 0.1 (3)
C8—N3—C7—N2 4.8 (2) C2—C3—C4—C5 0.3 (3)
C7—N3—C8—O3 −2.9 (3) C3—C4—C5—C6 0.0 (4)
C7—N3—C8—C9 177.33 (16) C4—C5—C6—C1 −0.6 (3)
C8—N3—C7—S1 −177.15 (13)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N2—H2···O1 0.86 2.23 2.661 (2) 111
N2—H2···O3 0.86 1.93 2.630 (2) 137
N3—H3A···S1i 0.86 2.59 3.4371 (14) 168
C9—H9C···O2ii 0.96 2.51 3.428 (3) 161

Symmetry codes: (i) −x+2, −y, −z; (ii) −x+3/2, y−1/2, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB6744).

References

  1. Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573.
  2. Bruker (2005). SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Bruker (2009). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  4. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  5. Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838.
  6. Shahwar, D., Tahir, M. N., Chohan, M. M., Ahmad, N. & Raza, M. A. (2012a). Acta Cryst. E68, o1189. [DOI] [PMC free article] [PubMed]
  7. Shahwar, D., Tahir, M. N., Chohan, M. M., Ahmad, N. & Raza, M. A. (2012b). Acta Cryst. E68, o1189. [DOI] [PMC free article] [PubMed]
  8. Shahwar, D., Tahir, M. N., Chohan, M. M., Ahmad, N. & Samiullah, (2012c). Acta Cryst. E68, o508. [DOI] [PMC free article] [PubMed]
  9. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  10. Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812016947/hb6744sup1.cif

e-68-o1578-sup1.cif (19.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812016947/hb6744Isup2.hkl

e-68-o1578-Isup2.hkl (130.4KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812016947/hb6744Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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