Abstract
In the title molecule, C18H20F2N2O2S, the 2,6-difluoro-4-hydroxyphenyl ring and the carbonylthiourea group are each essentially planar, with maximum deviations of atoms from their mean planes of 0.0113 (14) and 0.1017 (15) Å, respectively; the dihedral angle between these two planes is 71.03 (6)°. An intramolecular N—H⋯O hydrogen bond occurs. In the crystal, N—H⋯O and O—H⋯S hydrogen bonds connect the molecules into chains running diagonally across the bc plane. C—H⋯S and C—H⋯F contacts are also observed.
Related literature
For background studies of thiourea derivatives, see: Saeed et al. (2011 ▶). For a related structure, see: Saeed et al. (2010 ▶).
Experimental
Crystal data
C18H20F2N2O2S
M r = 366.42
Triclinic,
a = 7.3985 (9) Å
b = 10.4953 (13) Å
c = 12.4094 (15) Å
α = 65.554 (2)°
β = 79.372 (2)°
γ = 89.766 (2)°
V = 859.34 (18) Å3
Z = 2
Mo Kα radiation
μ = 0.22 mm−1
T = 296 K
0.38 × 0.36 × 0.08 mm
Data collection
Bruker SMART 1000 CCD diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.920, T max = 0.982
4824 measured reflections
2976 independent reflections
2399 reflections with I > 2σ(I)
R int = 0.010
Refinement
R[F 2 > 2σ(F 2)] = 0.038
wR(F 2) = 0.100
S = 1.04
2976 reflections
238 parameters
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.17 e Å−3
Δρmin = −0.18 e Å−3
Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97.
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812018806/pv2537sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812018806/pv2537Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812018806/pv2537Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N1—H1⋯O2 | 0.79 (2) | 2.09 (2) | 2.692 (2) | 133 (2) |
| N1—H1⋯O2i | 0.79 (2) | 2.52 (2) | 3.185 (3) | 142 (2) |
| O1—H1O⋯S1ii | 0.87 (3) | 2.36 (3) | 3.212 (2) | 169 (3) |
| C14—H14A⋯S1iii | 0.97 | 2.84 | 3.761 (2) | 159 |
| C14—H14B⋯F1iv | 0.97 | 2.45 | 3.354 (3) | 155 |
Symmetry codes: (i)
; (ii)
; (iii)
; (iv)
.
Acknowledgments
SS is thankful to the University of Hong Kong for providing the facility for crystallographic studies.
supplementary crystallographic information
Comment
In continuation of our studies on structural chemistry of N,N'-disubstituted thiourea (Saeed, et al., 2011), the structure of the title compound is described in this article.
In the title molecule (Fig. 1), the 2,6-difluoro-4-hydroxy-phenyl ring (C1–C6/O1/F1/F2) and the carbonyl thiourea group (S1/N1/N2/O2/C7/C8) are individually more or less planar, with maximum deviations of atoms from their mean planes being 0.0113 (14) Å for O1 and 0.1017 (15) Å for N2, respectively; the dihedral angle between these two planes is 71.03 (6)°.
Hydrogen bonding interactions were observed in the crystal lattice which connect the molecules into 1-D chains running diagonally across the b-c-plane (Table 1 and Fig. 2).
Experimental
A mixture of adamantane-1-carbonyl chloride (199 mg, 1 mmol), 4-amino-3,5-difluorophenol (145 mg, 1 mmol) and potassium thiocyanate (100 mg) was heated for 30 minutes in ethanol (5 ml) at 351 K. The reaction mixture was left overnight to cool down at room temperature to afford a solid product which was filtered off, washed and recrystallized from ethanol. Colorless crystals suitable for X-ray crystallographic studies were collected and dried (yield = 82%; m. p. = 455-456 K).
Refinement
The C-bound H atoms were placed at geometrically idealized positions with C—H = 0.93, 0.97 and 0.98 Å for phenyl, methylene and methine H-atoms, respectively, and were refined using riding model with Uiso(H) = 1.2Ueq(C). The N and O-bound H atoms were located from a difference Fourier map and were refined isotropically.
Figures
Fig. 1.
The molecular structure of the title compound with the atom numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are presented as small spheres of arbitrary radius.
Fig. 2.
A view of the N—H···O and O—H···S hydrogen bonds (dotted lines) in the crystal structure of the title compound. H atoms non-participating in hydrogen-bonding were omitted for clarity.
Crystal data
| C18H20F2N2O2S | Z = 2 |
| Mr = 366.42 | F(000) = 384 |
| Triclinic, P1 | Dx = 1.416 Mg m−3 |
| Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
| a = 7.3985 (9) Å | Cell parameters from 4824 reflections |
| b = 10.4953 (13) Å | θ = 2.8–25.0° |
| c = 12.4094 (15) Å | µ = 0.22 mm−1 |
| α = 65.554 (2)° | T = 296 K |
| β = 79.372 (2)° | Plate, colourless |
| γ = 89.766 (2)° | 0.38 × 0.36 × 0.08 mm |
| V = 859.34 (18) Å3 |
Data collection
| Bruker SMART 1000 CCD diffractometer | 2976 independent reflections |
| Radiation source: fine-focus sealed tube | 2399 reflections with I > 2σ(I) |
| Graphite monochromator | Rint = 0.010 |
| ω & φ scans | θmax = 25.0°, θmin = 2.8° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 2004) | h = −8→8 |
| Tmin = 0.920, Tmax = 0.982 | k = −9→12 |
| 4824 measured reflections | l = −14→14 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.038 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.100 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.04 | w = 1/[σ2(Fo2) + (0.0409P)2 + 0.3498P] where P = (Fo2 + 2Fc2)/3 |
| 2976 reflections | (Δ/σ)max < 0.001 |
| 238 parameters | Δρmax = 0.17 e Å−3 |
| 0 restraints | Δρmin = −0.18 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| S1 | 0.98449 (8) | −0.02031 (6) | 0.68281 (5) | 0.05290 (18) | |
| F1 | 1.3675 (2) | 0.16253 (18) | 0.66290 (12) | 0.0801 (5) | |
| F2 | 0.81301 (19) | 0.25665 (16) | 0.85556 (13) | 0.0769 (4) | |
| O1 | 1.2972 (3) | 0.08462 (19) | 1.06720 (15) | 0.0659 (5) | |
| H1O | 1.212 (4) | 0.076 (3) | 1.128 (3) | 0.095 (11)* | |
| O2 | 0.8566 (3) | 0.42734 (17) | 0.47025 (18) | 0.0918 (7) | |
| N1 | 1.0107 (3) | 0.2470 (2) | 0.64901 (16) | 0.0533 (5) | |
| H1 | 0.993 (3) | 0.327 (3) | 0.613 (2) | 0.061 (7)* | |
| N2 | 0.8692 (3) | 0.19619 (19) | 0.51851 (15) | 0.0481 (4) | |
| H2 | 0.838 (3) | 0.132 (2) | 0.5017 (18) | 0.046 (6)* | |
| C1 | 1.0863 (3) | 0.2106 (2) | 0.75458 (17) | 0.0465 (5) | |
| C2 | 1.2611 (3) | 0.1657 (2) | 0.76211 (18) | 0.0508 (5) | |
| C3 | 1.3321 (3) | 0.1234 (2) | 0.86477 (18) | 0.0521 (5) | |
| H3 | 1.4501 | 0.0926 | 0.8662 | 0.063* | |
| C4 | 1.2233 (3) | 0.1278 (2) | 0.96622 (17) | 0.0467 (5) | |
| C5 | 1.0489 (3) | 0.1751 (2) | 0.96344 (18) | 0.0491 (5) | |
| H5 | 0.9768 | 0.1803 | 1.0311 | 0.059* | |
| C6 | 0.9851 (3) | 0.2141 (2) | 0.85798 (19) | 0.0484 (5) | |
| C7 | 0.9559 (3) | 0.1514 (2) | 0.61553 (16) | 0.0433 (5) | |
| C8 | 0.8121 (3) | 0.3264 (2) | 0.45461 (19) | 0.0517 (5) | |
| C9 | 0.6926 (3) | 0.3338 (2) | 0.36480 (16) | 0.0417 (4) | |
| C10 | 0.5468 (3) | 0.4380 (2) | 0.3671 (2) | 0.0615 (6) | |
| H10A | 0.4691 | 0.4041 | 0.4471 | 0.074* | |
| H10B | 0.6072 | 0.5285 | 0.3488 | 0.074* | |
| C11 | 0.4287 (4) | 0.4539 (3) | 0.2740 (3) | 0.0733 (8) | |
| H11 | 0.3357 | 0.5200 | 0.2761 | 0.088* | |
| C12 | 0.3332 (3) | 0.3132 (3) | 0.3014 (3) | 0.0759 (8) | |
| H12A | 0.2537 | 0.2768 | 0.3810 | 0.091* | |
| H12B | 0.2573 | 0.3246 | 0.2426 | 0.091* | |
| C13 | 0.4766 (3) | 0.2112 (2) | 0.2971 (2) | 0.0541 (5) | |
| H13 | 0.4143 | 0.1204 | 0.3151 | 0.065* | |
| C14 | 0.5933 (3) | 0.1922 (2) | 0.39204 (18) | 0.0457 (5) | |
| H14A | 0.6834 | 0.1251 | 0.3912 | 0.055* | |
| H14B | 0.5145 | 0.1559 | 0.4718 | 0.055* | |
| C15 | 0.8154 (3) | 0.3888 (3) | 0.23861 (19) | 0.0575 (6) | |
| H15A | 0.9072 | 0.3232 | 0.2363 | 0.069* | |
| H15B | 0.8793 | 0.4783 | 0.2197 | 0.069* | |
| C16 | 0.6960 (4) | 0.4067 (3) | 0.1452 (2) | 0.0684 (7) | |
| H16 | 0.7744 | 0.4432 | 0.0643 | 0.082* | |
| C17 | 0.6014 (3) | 0.2650 (3) | 0.1738 (2) | 0.0631 (6) | |
| H17A | 0.5297 | 0.2744 | 0.1133 | 0.076* | |
| H17B | 0.6932 | 0.1990 | 0.1728 | 0.076* | |
| C18 | 0.5517 (4) | 0.5102 (3) | 0.1499 (2) | 0.0811 (9) | |
| H18A | 0.6129 | 0.6003 | 0.1320 | 0.097* | |
| H18B | 0.4778 | 0.5238 | 0.0896 | 0.097* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| S1 | 0.0726 (4) | 0.0439 (3) | 0.0474 (3) | 0.0169 (3) | −0.0265 (3) | −0.0185 (2) |
| F1 | 0.0762 (10) | 0.1176 (13) | 0.0479 (8) | 0.0208 (9) | −0.0104 (7) | −0.0372 (8) |
| F2 | 0.0675 (9) | 0.0973 (11) | 0.0828 (10) | 0.0420 (8) | −0.0378 (8) | −0.0454 (9) |
| O1 | 0.0662 (11) | 0.0889 (13) | 0.0456 (9) | 0.0123 (9) | −0.0283 (8) | −0.0240 (9) |
| O2 | 0.1500 (18) | 0.0459 (10) | 0.1119 (15) | 0.0241 (10) | −0.0993 (14) | −0.0348 (10) |
| N1 | 0.0806 (14) | 0.0408 (10) | 0.0478 (10) | 0.0158 (10) | −0.0380 (10) | −0.0175 (9) |
| N2 | 0.0674 (12) | 0.0421 (10) | 0.0468 (10) | 0.0137 (9) | −0.0317 (9) | −0.0221 (8) |
| C1 | 0.0626 (13) | 0.0406 (11) | 0.0417 (11) | 0.0084 (10) | −0.0255 (10) | −0.0165 (9) |
| C2 | 0.0556 (13) | 0.0596 (13) | 0.0379 (11) | 0.0067 (10) | −0.0114 (9) | −0.0203 (10) |
| C3 | 0.0463 (12) | 0.0630 (14) | 0.0465 (12) | 0.0087 (10) | −0.0163 (9) | −0.0194 (10) |
| C4 | 0.0523 (12) | 0.0483 (12) | 0.0398 (11) | 0.0010 (9) | −0.0199 (9) | −0.0142 (9) |
| C5 | 0.0561 (13) | 0.0529 (12) | 0.0414 (11) | 0.0070 (10) | −0.0134 (9) | −0.0214 (10) |
| C6 | 0.0515 (12) | 0.0458 (11) | 0.0549 (12) | 0.0139 (9) | −0.0240 (10) | −0.0226 (10) |
| C7 | 0.0497 (11) | 0.0473 (11) | 0.0370 (10) | 0.0114 (9) | −0.0172 (9) | −0.0183 (9) |
| C8 | 0.0689 (14) | 0.0439 (12) | 0.0497 (12) | 0.0104 (10) | −0.0311 (11) | −0.0192 (10) |
| C9 | 0.0494 (11) | 0.0394 (10) | 0.0394 (10) | 0.0077 (9) | −0.0197 (9) | −0.0152 (9) |
| C10 | 0.0797 (16) | 0.0561 (14) | 0.0650 (14) | 0.0285 (12) | −0.0339 (12) | −0.0335 (12) |
| C11 | 0.0812 (18) | 0.0689 (17) | 0.0902 (19) | 0.0416 (14) | −0.0524 (16) | −0.0393 (15) |
| C12 | 0.0513 (14) | 0.090 (2) | 0.096 (2) | 0.0159 (13) | −0.0330 (14) | −0.0404 (16) |
| C13 | 0.0497 (12) | 0.0524 (13) | 0.0647 (14) | 0.0012 (10) | −0.0258 (11) | −0.0232 (11) |
| C14 | 0.0472 (11) | 0.0448 (11) | 0.0428 (11) | 0.0029 (9) | −0.0128 (9) | −0.0145 (9) |
| C15 | 0.0553 (13) | 0.0594 (14) | 0.0500 (12) | −0.0110 (11) | −0.0106 (10) | −0.0152 (11) |
| C16 | 0.0849 (18) | 0.0748 (17) | 0.0357 (11) | −0.0125 (14) | −0.0149 (11) | −0.0124 (11) |
| C17 | 0.0784 (16) | 0.0709 (16) | 0.0530 (13) | 0.0091 (13) | −0.0310 (12) | −0.0314 (12) |
| C18 | 0.124 (2) | 0.0520 (14) | 0.0721 (17) | 0.0101 (15) | −0.0662 (17) | −0.0112 (13) |
Geometric parameters (Å, º)
| S1—C7 | 1.675 (2) | C10—C11 | 1.529 (3) |
| F1—C2 | 1.346 (2) | C10—H10A | 0.9700 |
| F2—C6 | 1.349 (2) | C10—H10B | 0.9700 |
| O1—C4 | 1.362 (2) | C11—C18 | 1.512 (4) |
| O1—H1O | 0.87 (3) | C11—C12 | 1.517 (4) |
| O2—C8 | 1.211 (2) | C11—H11 | 0.9800 |
| N1—C7 | 1.325 (3) | C12—C13 | 1.514 (3) |
| N1—C1 | 1.425 (2) | C12—H12A | 0.9700 |
| N1—H1 | 0.79 (2) | C12—H12B | 0.9700 |
| N2—C7 | 1.377 (2) | C13—C17 | 1.510 (3) |
| N2—C8 | 1.377 (3) | C13—C14 | 1.534 (3) |
| N2—H2 | 0.83 (2) | C13—H13 | 0.9800 |
| C1—C6 | 1.376 (3) | C14—H14A | 0.9700 |
| C1—C2 | 1.380 (3) | C14—H14B | 0.9700 |
| C2—C3 | 1.369 (3) | C15—C16 | 1.535 (3) |
| C3—C4 | 1.382 (3) | C15—H15A | 0.9700 |
| C3—H3 | 0.9300 | C15—H15B | 0.9700 |
| C4—C5 | 1.382 (3) | C16—C17 | 1.519 (3) |
| C5—C6 | 1.373 (3) | C16—C18 | 1.531 (4) |
| C5—H5 | 0.9300 | C16—H16 | 0.9800 |
| C8—C9 | 1.523 (2) | C17—H17A | 0.9700 |
| C9—C15 | 1.531 (3) | C17—H17B | 0.9700 |
| C9—C10 | 1.538 (3) | C18—H18A | 0.9700 |
| C9—C14 | 1.538 (3) | C18—H18B | 0.9700 |
| C4—O1—H1O | 109 (2) | C18—C11—H11 | 109.4 |
| C7—N1—C1 | 122.30 (17) | C12—C11—H11 | 109.4 |
| C7—N1—H1 | 119.5 (17) | C10—C11—H11 | 109.4 |
| C1—N1—H1 | 118.0 (17) | C13—C12—C11 | 109.5 (2) |
| C7—N2—C8 | 129.89 (18) | C13—C12—H12A | 109.8 |
| C7—N2—H2 | 113.5 (14) | C11—C12—H12A | 109.8 |
| C8—N2—H2 | 116.3 (14) | C13—C12—H12B | 109.8 |
| C6—C1—C2 | 115.57 (17) | C11—C12—H12B | 109.8 |
| C6—C1—N1 | 121.27 (19) | H12A—C12—H12B | 108.2 |
| C2—C1—N1 | 123.14 (19) | C17—C13—C12 | 110.9 (2) |
| F1—C2—C3 | 118.07 (19) | C17—C13—C14 | 109.09 (17) |
| F1—C2—C1 | 118.10 (17) | C12—C13—C14 | 109.23 (19) |
| C3—C2—C1 | 123.83 (19) | C17—C13—H13 | 109.2 |
| C2—C3—C4 | 118.00 (19) | C12—C13—H13 | 109.2 |
| C2—C3—H3 | 121.0 | C14—C13—H13 | 109.2 |
| C4—C3—H3 | 121.0 | C13—C14—C9 | 109.91 (16) |
| O1—C4—C5 | 122.39 (19) | C13—C14—H14A | 109.7 |
| O1—C4—C3 | 116.74 (19) | C9—C14—H14A | 109.7 |
| C5—C4—C3 | 120.87 (17) | C13—C14—H14B | 109.7 |
| C6—C5—C4 | 118.13 (19) | C9—C14—H14B | 109.7 |
| C6—C5—H5 | 120.9 | H14A—C14—H14B | 108.2 |
| C4—C5—H5 | 120.9 | C9—C15—C16 | 109.42 (18) |
| F2—C6—C5 | 118.48 (19) | C9—C15—H15A | 109.8 |
| F2—C6—C1 | 117.93 (17) | C16—C15—H15A | 109.8 |
| C5—C6—C1 | 123.58 (19) | C9—C15—H15B | 109.8 |
| N1—C7—N2 | 117.75 (17) | C16—C15—H15B | 109.8 |
| N1—C7—S1 | 124.67 (14) | H15A—C15—H15B | 108.2 |
| N2—C7—S1 | 117.59 (15) | C17—C16—C18 | 110.1 (2) |
| O2—C8—N2 | 120.81 (18) | C17—C16—C15 | 109.17 (19) |
| O2—C8—C9 | 123.18 (18) | C18—C16—C15 | 109.3 (2) |
| N2—C8—C9 | 116.01 (17) | C17—C16—H16 | 109.4 |
| C8—C9—C15 | 108.41 (17) | C18—C16—H16 | 109.4 |
| C8—C9—C10 | 107.81 (16) | C15—C16—H16 | 109.4 |
| C15—C9—C10 | 109.33 (17) | C13—C17—C16 | 109.20 (19) |
| C8—C9—C14 | 114.03 (15) | C13—C17—H17A | 109.8 |
| C15—C9—C14 | 108.57 (16) | C16—C17—H17A | 109.8 |
| C10—C9—C14 | 108.62 (17) | C13—C17—H17B | 109.8 |
| C11—C10—C9 | 109.65 (17) | C16—C17—H17B | 109.8 |
| C11—C10—H10A | 109.7 | H17A—C17—H17B | 108.3 |
| C9—C10—H10A | 109.7 | C11—C18—C16 | 109.77 (19) |
| C11—C10—H10B | 109.7 | C11—C18—H18A | 109.7 |
| C9—C10—H10B | 109.7 | C16—C18—H18A | 109.7 |
| H10A—C10—H10B | 108.2 | C11—C18—H18B | 109.7 |
| C18—C11—C12 | 109.5 (2) | C16—C18—H18B | 109.7 |
| C18—C11—C10 | 108.9 (2) | H18A—C18—H18B | 108.2 |
| C12—C11—C10 | 110.4 (2) |
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1···O2 | 0.79 (2) | 2.09 (2) | 2.692 (2) | 133 (2) |
| N1—H1···O2i | 0.79 (2) | 2.52 (2) | 3.185 (3) | 142 (2) |
| O1—H1O···S1ii | 0.87 (3) | 2.36 (3) | 3.212 (2) | 169 (3) |
| C14—H14A···S1iii | 0.97 | 2.84 | 3.761 (2) | 159 |
| C14—H14B···F1iv | 0.97 | 2.45 | 3.354 (3) | 155 |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) −x+2, −y, −z+2; (iii) −x+2, −y, −z+1; (iv) x−1, y, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: PV2537).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812018806/pv2537sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812018806/pv2537Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812018806/pv2537Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


