Abstract
The reaction between methyl (R)-2-(2-chlorophenyl)-2-hydroxyacetate and 3-nitrobenzenesulfonyl chloride gave the title compound, C15H12ClNO7S, which is a promising intermediate for the synthesis of Clopidrogel, an antiplatelet drug used in the prevention of strokes and heart attacks. In the crystal, molecules are linked through C—H⋯O interactions, and there is also a short Cl⋯O contact present [Cl⋯O = 3.018 (2) Å].
Related literature
For the synthesis of (R)-2-(2-chlorophenyl)-2-hydroxyacetic acid, see: Bousquet & Musolino (2003 ▶). For related structures, see: Sun et al. (2007 ▶); Andersen et al. (2007 ▶). For the synthesis of Clopidrogel from sulfonyloxyacetic esters of (R)-2-(2-chlorophenyl)-2-hydroxyacetic acid, see: Bousquet & Musolino (1999 ▶); Castaldi et al. (2003 ▶); Ema et al. (2007 ▶); Zhu et al. (2010 ▶). For halogen bonds, see: Bianchi et al. (2004 ▶); Fourmigue (2009 ▶); Metrangolo et al. (2005 ▶).
Experimental
Crystal data
C15H12ClNO7S
M r = 385.77
Orthorhombic,
a = 7.5791 (3) Å
b = 11.0242 (5) Å
c = 19.6736 (7) Å
V = 1643.80 (11) Å3
Z = 4
Mo Kα radiation
μ = 0.40 mm−1
T = 293 K
0.30 × 0.25 × 0.22 mm
Data collection
Agilent Xcalibur Eos Gemini diffractometer
Absorption correction: multi-scan (Crysalis PRO; Agilent, 2011 ▶) T min = 0.890, T max = 0.918
5654 measured reflections
3153 independent reflections
2680 reflections with I > 2σ(I)
R int = 0.023
Refinement
R[F 2 > 2σ(F 2)] = 0.039
wR(F 2) = 0.086
S = 1.02
3153 reflections
227 parameters
H-atom parameters constrained
Δρmax = 0.21 e Å−3
Δρmin = −0.21 e Å−3
Absolute structure: Flack (1983 ▶), 1209 Friedel pairs
Flack parameter: 0.07 (7)
Data collection: Crysalis PRO (Agilent, 2011 ▶); cell refinement: Crysalis PRO; data reduction: Crysalis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL/PC (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL/PC and PLATON (Spek, 2009 ▶).
Supplementary Material
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812020016/zl2477sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812020016/zl2477Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812020016/zl2477Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C14—H5⋯O4 | 0.93 | 2.55 | 2.920 (4) | 104 |
| C14—H5⋯O1i | 0.93 | 2.60 | 3.323 (4) | 135 |
| C15—H8C⋯O5ii | 0.96 | 2.53 | 3.419 (4) | 155 |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
This work was supported by the Program for Science and Technology Innovation Talents at the Universities of Henan Province (grant No. 2011HASTIT022).
supplementary crystallographic information
Comment
Sulfonyloxyacetic esters of (R)-methyl-2-(2-chlorophenyl)-2-hydroxyacetate are commonly used in the synthesis of Clopidrogel, an antiplatelet drug used in the prevention of strokes and heart attacks (sold in the United States under the brand name of Plavix) (Bousquet & Musolino, 1999; Castaldi et al., 2003; Ema et al., 2007; Zhu et al., 2010). The title compound, a promising intermediate for the synthesis of Clopidrogel, was obtained in two steps from (R)-2-(2-chlorophenyl)-2-hydroxyacetic acid (Bousquet & Musolino, 2003). We report here its crystal structure. In the molecule of the title compound (Fig. 1), the main bond lengths and angles are close to those found in some other derivatives of (R)-methyl-2-(2-chlorophenyl)-2-hydroxyacetate (for example, (R)-methyl-2-(2-chlorophenyl)-2-(benzenesulfonyloxy) acetate and 4aR,11R,11aS)-11-methyl-9- (trifluoromethyl)-1,2,2,3,4,4a,5,6,11,11adecahydro-pyrido[4,3-b] carbazole (R)-2-chloromandelate (Sun et al., 2007; Andersen et al., 2007). The crystal structure of this compound is stabilized by an intermolecular halogen bond (Bianchi et al., 2004; Fourmigue, 2009; Metrangolo et al., 2005) between the Cl atom and one of the O atoms of the SO2 group of an adjacent molecule, with a C4–Cl1···O4i separation of 3.018 (2) Å (Fig. 2 and Table 1). Symmetry code (i): x - 1, y, z. The crystal structure is also stabilized by intermolecular C–H···O hydrogen bonding interactions (Table 1).
Experimental
(R)-2-(2-Chlorophenyl)-2-hydroxyacetic acid and (R)-methyl-2- (2-chlorophenyl)-2-hydroxyacetate were prepared using the established literature procedures (Bousquet et al., 2003, and Sun et al., 2007). A three-necked round-bottomed flask, which was equipped with a magnetic stir bar, was charged with dichloromethane (50 ml), (R)-methyl-2- (2-chlorophenyl)-2-hydroxyacetate (4.5 g), triethylamine (4.3 g), and 4,4-dimethylaminopyridine (275 mg). 3-Nitrobenzenesulfonyl chloride (5.5 g) and dichloromethane (50 ml) were added via syringe. The mixture was stirred at room temperature for 3 h. The reaction mixture was quenched with water, and washed with 1 N HCl (30 ml) twice. The organic layer was dried over anhydrous sodium sulfate and filtered. After concentration under reduced pressure, the residue was purified by silica gel column chromatography with a mixture of petroleum ether and ethyl acetate (4:1 v/v) as eluent to give the title compound (yield, 54%). 1H NMR (400 MHz, CDCl3): 8.648 (s, 1H), 8.432 (d, J = 8.0 Hz, 1H), 8.208 (d, J = 8.0 Hz, 1H), 7.704 (t, J = 8.0 Hz, 1H), 7.376 (d, J = 8.0 Hz, 1H), 7.319 - 7.206 (m, 3H), 6.394 (s, 1H), 3.765 (s, 3H) p.p.m.. Well shaped colorless crystals were obtained by slow evaporation of a solution in petroleum ether and ethyl acetate at room temperature for a few days.
Refinement
All hydrogen atoms were fixed geometrically (C—H bond fixed at 0.93 and 0.96 Å for aromatic and methyl H atoms, respectively) with Uiso(H) = 1.2 (1.5 for methyl groups) times Ueq(C).
Figures
Fig. 1.
A view of the compound with the atomic numbering scheme. Displacement ellipsoids are drawn at the 30% probability level.
Fig. 2.
A view of the C—Cl···O interaction (dashed lines) in the crystal structure of the title compound. Symmetry code (i): x - 1, y, z.
Fig. 3.
The packing of the compound, viewed down the a axis.
Crystal data
| C15H12ClNO7S | F(000) = 792 |
| Mr = 385.77 | Dx = 1.559 Mg m−3 |
| Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: P 2ac 2ab | Cell parameters from 1814 reflections |
| a = 7.5791 (3) Å | θ = 3.3–26.3° |
| b = 11.0242 (5) Å | µ = 0.40 mm−1 |
| c = 19.6736 (7) Å | T = 293 K |
| V = 1643.80 (11) Å3 | Prism, colourless |
| Z = 4 | 0.30 × 0.25 × 0.22 mm |
Data collection
| Agilent Xcalibur Eos Gemini diffractometer | 3153 independent reflections |
| Radiation source: fine-focus sealed tube | 2680 reflections with I > 2σ(I) |
| Graphite monochromator | Rint = 0.023 |
| Detector resolution: 13.6612 pixels mm-1 | θmax = 26.4°, θmin = 3.3° |
| ω scans | h = −9→9 |
| Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011) | k = −13→12 |
| Tmin = 0.890, Tmax = 0.918 | l = −24→15 |
| 5654 measured reflections |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.039 | H-atom parameters constrained |
| wR(F2) = 0.086 | w = 1/[σ2(Fo2) + (0.0393P)2 + 0.1718P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.02 | (Δ/σ)max < 0.001 |
| 3153 reflections | Δρmax = 0.21 e Å−3 |
| 227 parameters | Δρmin = −0.21 e Å−3 |
| 0 restraints | Absolute structure: Flack (1983), 1209 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.07 (7) |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| S1 | 0.47477 (9) | 0.03812 (6) | 0.23919 (4) | 0.03772 (18) | |
| Cl1 | −0.05655 (10) | 0.08212 (8) | 0.36889 (4) | 0.0513 (2) | |
| N1 | 0.2766 (4) | 0.3236 (3) | 0.04654 (14) | 0.0554 (7) | |
| O7 | 0.1312 (4) | 0.2781 (3) | 0.05356 (13) | 0.0763 (8) | |
| O6 | 0.3113 (4) | 0.4007 (2) | 0.00436 (14) | 0.0820 (8) | |
| O5 | 0.4263 (3) | −0.06820 (17) | 0.20270 (10) | 0.0474 (5) | |
| O4 | 0.6140 (3) | 0.0334 (2) | 0.28718 (11) | 0.0540 (6) | |
| O2 | 0.1443 (3) | 0.36269 (18) | 0.33486 (10) | 0.0449 (5) | |
| O1 | 0.0857 (3) | 0.2602 (2) | 0.23895 (10) | 0.0544 (6) | |
| O3 | 0.2979 (2) | 0.07757 (16) | 0.27557 (9) | 0.0342 (4) | |
| C10 | 0.3826 (4) | 0.1918 (3) | 0.13767 (14) | 0.0400 (7) | |
| H1A | 0.2728 | 0.1541 | 0.1383 | 0.048* | |
| C11 | 0.4194 (4) | 0.2837 (3) | 0.09275 (14) | 0.0417 (7) | |
| C12 | 0.5830 (4) | 0.3385 (3) | 0.08930 (16) | 0.0496 (8) | |
| H3 | 0.6055 | 0.3984 | 0.0571 | 0.060* | |
| C13 | 0.7118 (4) | 0.3032 (3) | 0.13422 (17) | 0.0504 (8) | |
| H4 | 0.8222 | 0.3399 | 0.1327 | 0.061* | |
| C14 | 0.6791 (4) | 0.2137 (3) | 0.18141 (16) | 0.0442 (7) | |
| H5 | 0.7656 | 0.1913 | 0.2125 | 0.053* | |
| C9 | 0.5149 (4) | 0.1576 (2) | 0.18190 (13) | 0.0369 (6) | |
| C1 | 0.1619 (4) | 0.2713 (3) | 0.29162 (14) | 0.0371 (6) | |
| C15 | 0.0212 (4) | 0.4558 (3) | 0.31462 (17) | 0.0591 (9) | |
| H8A | 0.0540 | 0.4868 | 0.2708 | 0.089* | |
| H8B | 0.0231 | 0.5204 | 0.3473 | 0.089* | |
| H8C | −0.0954 | 0.4221 | 0.3123 | 0.089* | |
| C2 | 0.3017 (3) | 0.1846 (2) | 0.31890 (13) | 0.0336 (6) | |
| H9 | 0.4171 | 0.2235 | 0.3133 | 0.040* | |
| C3 | 0.2823 (4) | 0.1498 (2) | 0.39238 (14) | 0.0352 (6) | |
| C8 | 0.4258 (4) | 0.1657 (3) | 0.43647 (15) | 0.0473 (7) | |
| H11 | 0.5314 | 0.1963 | 0.4196 | 0.057* | |
| C7 | 0.4125 (5) | 0.1367 (3) | 0.50432 (17) | 0.0584 (9) | |
| H12 | 0.5084 | 0.1482 | 0.5331 | 0.070* | |
| C6 | 0.2564 (5) | 0.0905 (3) | 0.52935 (15) | 0.0588 (10) | |
| H13 | 0.2472 | 0.0717 | 0.5753 | 0.071* | |
| C5 | 0.1147 (5) | 0.0719 (3) | 0.48751 (15) | 0.0495 (8) | |
| H14 | 0.0108 | 0.0391 | 0.5046 | 0.059* | |
| C4 | 0.1279 (4) | 0.1026 (3) | 0.41929 (13) | 0.0378 (7) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| S1 | 0.0318 (3) | 0.0408 (4) | 0.0406 (4) | 0.0007 (3) | 0.0028 (3) | 0.0023 (3) |
| Cl1 | 0.0389 (4) | 0.0714 (5) | 0.0437 (4) | −0.0063 (4) | −0.0013 (3) | 0.0053 (4) |
| N1 | 0.069 (2) | 0.0531 (17) | 0.0436 (15) | 0.0037 (16) | −0.0046 (15) | 0.0024 (14) |
| O7 | 0.0629 (16) | 0.100 (2) | 0.0655 (16) | −0.0087 (15) | −0.0233 (14) | 0.0133 (16) |
| O6 | 0.104 (2) | 0.0721 (18) | 0.0705 (16) | 0.0062 (17) | −0.0065 (17) | 0.0295 (16) |
| O5 | 0.0533 (13) | 0.0350 (11) | 0.0539 (12) | 0.0010 (9) | 0.0129 (11) | −0.0059 (9) |
| O4 | 0.0383 (11) | 0.0687 (14) | 0.0548 (13) | 0.0030 (11) | −0.0034 (10) | 0.0141 (12) |
| O2 | 0.0473 (12) | 0.0420 (11) | 0.0456 (11) | 0.0095 (9) | 0.0025 (10) | 0.0033 (10) |
| O1 | 0.0526 (13) | 0.0699 (15) | 0.0407 (11) | 0.0089 (11) | −0.0095 (11) | 0.0048 (11) |
| O3 | 0.0314 (9) | 0.0376 (10) | 0.0338 (9) | −0.0052 (8) | 0.0008 (8) | −0.0048 (8) |
| C10 | 0.0378 (15) | 0.0438 (17) | 0.0384 (15) | −0.0057 (13) | −0.0006 (13) | −0.0064 (14) |
| C11 | 0.0507 (18) | 0.0399 (16) | 0.0345 (14) | 0.0000 (14) | −0.0008 (14) | −0.0044 (13) |
| C12 | 0.064 (2) | 0.0359 (16) | 0.0491 (18) | −0.0059 (15) | 0.0150 (18) | 0.0029 (14) |
| C13 | 0.0412 (17) | 0.0444 (18) | 0.066 (2) | −0.0113 (14) | 0.0076 (17) | −0.0015 (17) |
| C14 | 0.0352 (16) | 0.0423 (16) | 0.0551 (18) | −0.0029 (13) | 0.0016 (15) | −0.0037 (15) |
| C9 | 0.0364 (15) | 0.0370 (14) | 0.0373 (14) | −0.0026 (12) | 0.0047 (13) | −0.0016 (12) |
| C1 | 0.0303 (15) | 0.0449 (16) | 0.0361 (14) | −0.0003 (12) | 0.0022 (13) | 0.0069 (14) |
| C15 | 0.056 (2) | 0.056 (2) | 0.066 (2) | 0.0220 (17) | 0.0167 (18) | 0.0188 (18) |
| C2 | 0.0305 (14) | 0.0344 (14) | 0.0360 (14) | −0.0042 (12) | −0.0024 (13) | −0.0030 (12) |
| C3 | 0.0426 (15) | 0.0288 (14) | 0.0342 (14) | 0.0039 (12) | −0.0077 (13) | −0.0058 (12) |
| C8 | 0.0567 (19) | 0.0361 (16) | 0.0493 (17) | −0.0013 (14) | −0.0122 (17) | −0.0049 (14) |
| C7 | 0.080 (3) | 0.0479 (19) | 0.0473 (18) | 0.0004 (19) | −0.0303 (19) | −0.0086 (16) |
| C6 | 0.094 (3) | 0.0486 (19) | 0.0340 (16) | 0.0087 (19) | −0.0082 (19) | −0.0031 (16) |
| C5 | 0.066 (2) | 0.0449 (18) | 0.0378 (15) | 0.0056 (16) | 0.0015 (15) | 0.0010 (14) |
| C4 | 0.0425 (16) | 0.0377 (15) | 0.0332 (14) | 0.0062 (12) | −0.0016 (13) | −0.0024 (13) |
Geometric parameters (Å, º)
| S1—O4 | 1.417 (2) | C13—H4 | 0.9300 |
| S1—O4 | 1.417 (2) | C14—C9 | 1.390 (4) |
| S1—O5 | 1.423 (2) | C14—H5 | 0.9300 |
| S1—O3 | 1.5809 (18) | C1—C2 | 1.524 (4) |
| S1—C9 | 1.760 (3) | C15—H8A | 0.9600 |
| Cl1—C4 | 1.728 (3) | C15—H8B | 0.9600 |
| N1—O6 | 1.217 (3) | C15—H8C | 0.9600 |
| N1—O7 | 1.218 (4) | C2—C3 | 1.503 (4) |
| N1—C11 | 1.480 (4) | C2—H9 | 0.9800 |
| O2—C1 | 1.326 (3) | C3—C4 | 1.386 (4) |
| O2—C15 | 1.443 (3) | C3—C8 | 1.402 (4) |
| O1—C1 | 1.192 (3) | C8—C7 | 1.376 (4) |
| O3—C2 | 1.456 (3) | C8—H11 | 0.9300 |
| C10—C11 | 1.373 (4) | C7—C6 | 1.379 (5) |
| C10—C9 | 1.380 (4) | C7—H12 | 0.9300 |
| C10—H1A | 0.9300 | C6—C5 | 1.368 (4) |
| C11—C12 | 1.381 (4) | C6—H13 | 0.9300 |
| C12—C13 | 1.374 (4) | C5—C4 | 1.388 (4) |
| C12—H3 | 0.9300 | C5—H14 | 0.9300 |
| C13—C14 | 1.377 (4) | ||
| O4—S1—O5 | 119.91 (14) | O1—C1—C2 | 125.3 (3) |
| O4—S1—O5 | 119.91 (14) | O2—C1—C2 | 108.7 (2) |
| O4—S1—O3 | 109.87 (11) | O2—C15—H8A | 109.5 |
| O4—S1—O3 | 109.87 (11) | O2—C15—H8B | 109.5 |
| O5—S1—O3 | 103.66 (11) | H8A—C15—H8B | 109.5 |
| O4—S1—C9 | 108.98 (13) | O2—C15—H8C | 109.5 |
| O4—S1—C9 | 108.98 (13) | H8A—C15—H8C | 109.5 |
| O5—S1—C9 | 109.75 (12) | H8B—C15—H8C | 109.5 |
| O3—S1—C9 | 103.33 (12) | O3—C2—C3 | 110.7 (2) |
| O6—N1—O7 | 124.1 (3) | O3—C2—C1 | 106.7 (2) |
| O6—N1—C11 | 117.9 (3) | C3—C2—C1 | 115.5 (2) |
| O7—N1—C11 | 118.0 (3) | O3—C2—H9 | 107.9 |
| C1—O2—C15 | 115.4 (2) | C3—C2—H9 | 107.9 |
| C2—O3—S1 | 118.10 (15) | C1—C2—H9 | 107.9 |
| C11—C10—C9 | 117.4 (3) | C4—C3—C8 | 117.7 (3) |
| C11—C10—H1A | 121.3 | C4—C3—C2 | 123.1 (2) |
| C9—C10—H1A | 121.3 | C8—C3—C2 | 119.2 (3) |
| C10—C11—C12 | 122.5 (3) | C7—C8—C3 | 121.0 (3) |
| C10—C11—N1 | 117.7 (3) | C7—C8—H11 | 119.5 |
| C12—C11—N1 | 119.8 (3) | C3—C8—H11 | 119.5 |
| C13—C12—C11 | 118.8 (3) | C8—C7—C6 | 119.6 (3) |
| C13—C12—H3 | 120.6 | C8—C7—H12 | 120.2 |
| C11—C12—H3 | 120.6 | C6—C7—H12 | 120.2 |
| C12—C13—C14 | 120.6 (3) | C5—C6—C7 | 120.9 (3) |
| C12—C13—H4 | 119.7 | C5—C6—H13 | 119.5 |
| C14—C13—H4 | 119.7 | C7—C6—H13 | 119.5 |
| C13—C14—C9 | 119.0 (3) | C6—C5—C4 | 119.3 (3) |
| C13—C14—H5 | 120.5 | C6—C5—H14 | 120.4 |
| C9—C14—H5 | 120.5 | C4—C5—H14 | 120.4 |
| C10—C9—C14 | 121.6 (3) | C3—C4—C5 | 121.4 (3) |
| C10—C9—S1 | 118.9 (2) | C3—C4—Cl1 | 120.9 (2) |
| C14—C9—S1 | 119.5 (2) | C5—C4—Cl1 | 117.7 (2) |
| O1—C1—O2 | 125.9 (3) |
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C14—H5···O4 | 0.93 | 2.55 | 2.920 (4) | 104 |
| C14—H5···O1i | 0.93 | 2.60 | 3.323 (4) | 135 |
| C15—H8C···O5ii | 0.96 | 2.53 | 3.419 (4) | 155 |
| C4—Cl1···O4iii | 1.73 (1) | 3.02 (1) | 4.744 (4) | 176 (1) |
Symmetry codes: (i) x+1, y, z; (ii) −x, y+1/2, −z+1/2; (iii) x−1, y, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: ZL2477).
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812020016/zl2477sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812020016/zl2477Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812020016/zl2477Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report



