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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 May 16;68(Pt 6):o1760. doi: 10.1107/S1600536812018405

2-[({2-[(2-Hy­droxy-5-meth­oxy­benzyl­idene)amino]­eth­yl}imino)­meth­yl]-4-meth­oxy­phenol

Ali Ourari a, Lotfi Baameur a, Sofiane Bouacida b,*, Kamel Ouari a
PMCID: PMC3379345  PMID: 22719543

Abstract

The asymmetric unit of the title compound, C18H20N2O4, contains one-half mol­ecule with an inversion center located at the centroid of the mol­ecule. In the crystal, mol­ecules are linked by C—H⋯π inter­actions, forming layers parallel to (101). An intra­molecular O—H⋯N hydrogen bond also occurs.

Related literature  

For the synthesis of similar compounds see: Srinivasan et al. (1986); Moutet & Ourari (1997); Ourari et al. (2008).graphic file with name e-68-o1760-scheme1.jpg

Experimental  

Crystal data  

  • C18H20N2O4

  • M r = 328.36

  • Monoclinic, Inline graphic

  • a = 15.0040 (12) Å

  • b = 5.9722 (3) Å

  • c = 9.3128 (8) Å

  • β = 92.001 (3)°

  • V = 833.98 (11) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.09 mm−1

  • T = 295 K

  • 0.50 × 0.23 × 0.19 mm

Data collection  

  • Nonius KappaCCD diffractometer

  • 3001 measured reflections

  • 1664 independent reflections

  • 1097 reflections with I > 2σ(I)

  • R int = 0.021

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.054

  • wR(F 2) = 0.167

  • S = 1.05

  • 1664 reflections

  • 111 parameters

  • H-atom parameters constrained

  • Δρmax = 0.23 e Å−3

  • Δρmin = −0.16 e Å−3

Data collection: COLLECT (Nonius, 1998); cell refinement: SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO (Otwinowski & Minor 1997) and SCALEPACK; program(s) used to solve structure: SIR2002 (Burla et al., 2005); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and DIAMOND (Brandenburg & Berndt, 2001); software used to prepare material for publication: WinGX (Farrugia, 1999).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812018405/bq2353sup1.cif

e-68-o1760-sup1.cif (19.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812018405/bq2353Isup2.hkl

e-68-o1760-Isup2.hkl (80.3KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812018405/bq2353Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg is the centroid of the C4–C9 ring.

D—H⋯A D—H H⋯A DA D—H⋯A
O5—H5⋯N2 0.82 1.85 2.5844 (18) 148
C10—H10CCgi 0.96 2.64 3.521 (2) 152

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors thank the Algerian Ministère de l’Enseignement Supérieur et de la Recherche Scientifique for financial support and Professor L. Ouahab (Laboratoire des Sciences Chimiques, Rennes1, France) for his valuable contribution and insightful discussions.

supplementary crystallographic information

Comment

The tetradentate Schiff base ligands derived from salicylaldehyde derivatives and diamino compounds have been found to be excellent chelating agents for most applications in coordination chemistry such as in catalysis (Srinivasan et al., 1986) and electrocatalysis (Moutet & Ourari, 1997; Ourari et al., 2008). Here, we report the synthesis of the title compound and its crystal structure.

The molecular structure of (I), and the atomic numbering used, is illustrated in Fig. 1. The asymmetric unit of the title compound, consists of one-half of the molecule, with the other half generated by a crystallographic inversion center. The crystal packing in the title structure can be described by a zigzag layers parallel to (101) plane (Fig. 2). There is one intramolecular O—H···N hydrogen bonding in this packing (Table 1, Fig. 2), which it is stabilized C—H···π and Van der Walls interactions (table 1) All these interactions link the molecules within the layers and also link the layers together and reinforcing the cohesion of the structure.

Experimental

60 mg of 1,2-diaminoethane (1 mmol) were dissolved in 10 ml of absolute ethanol. This solution was drop wise added, under stirring, to an ethanolic solution (10 ml) containing 304 mg of 5-methoxysalicylaldehyde (2 mmol). This mixture was refluxed for 1 h after which a yellow precipitate is formed, recovered by filtration, washed several times with diethyl oxide and dried to yield 282 mg (86%) of the title compound. The suitable crystals for X-ray analysis were obtained by slow evaporation from a mixture of solvents ethanol/dichloromethane (8/2, v/v).

Refinement

The H atoms were localized on Fourier maps but introduced in calculated positions and treated as riding on their parent atoms (C and O) with C—H = 0.93 Å (methine, aromatic), 0.96 Å (methyl), 0.97 Å (methylene) and O—H = 0.82 Å (hydroxyl) with Uiso(H) = 1.2Ueq(C) or Uiso(H) = 1.5Ueq(O).

Figures

Fig. 1.

Fig. 1.

The molecular geometry of (I) with the atom-labeling scheme. Displacement ellipsoids are drawn at the 50% probability level. Only the contents of the asymmetric unit are numbered.

Fig. 2.

Fig. 2.

Diagram of layered packing parallel to (101) plane and showing O—H···N and C—H···π interactions.

Crystal data

C18H20N2O4 F(000) = 348
Mr = 328.36 Dx = 1.308 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 1761 reflections
a = 15.0040 (12) Å θ = 1.0–26.4°
b = 5.9722 (3) Å µ = 0.09 mm1
c = 9.3128 (8) Å T = 295 K
β = 92.001 (3)° Prism, colorless
V = 833.98 (11) Å3 0.50 × 0.23 × 0.19 mm
Z = 2

Data collection

Nonius KappaCCD diffractometer 1097 reflections with I > 2σ(I)
Radiation source: Enraf–Nonius FR590 Rint = 0.021
Graphite monochromator θmax = 26.4°, θmin = 2.7°
Detector resolution: 9 pixels mm-1 h = −18→18
CCD rotation images, thick slices scans k = −6→7
3001 measured reflections l = −11→11
1664 independent reflections

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.054 H-atom parameters constrained
wR(F2) = 0.167 w = 1/[σ2(Fo2) + (0.101P)2 + 0.0006P] where P = (Fo2 + 2Fc2)/3
S = 1.05 (Δ/σ)max < 0.001
1664 reflections Δρmax = 0.23 e Å3
111 parameters Δρmin = −0.16 e Å3
0 restraints Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.08 (2)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.00544 (12) 0.5332 (3) 0.42227 (18) 0.0554 (5)
H1A 0.0237 0.404 0.3674 0.066*
H1B −0.0511 0.586 0.3816 0.066*
C3 0.13689 (11) 0.6835 (3) 0.32973 (18) 0.0500 (5)
H3 0.1399 0.5537 0.2749 0.06*
C4 0.20642 (11) 0.8520 (3) 0.31789 (17) 0.0488 (5)
C5 0.20521 (13) 1.0483 (3) 0.40154 (19) 0.0545 (5)
C6 0.27360 (14) 1.2037 (3) 0.3894 (2) 0.0620 (5)
H6 0.2731 1.3341 0.4439 0.074*
C7 0.34154 (14) 1.1672 (3) 0.2983 (2) 0.0623 (5)
H7 0.3863 1.2739 0.2909 0.075*
C8 0.34469 (12) 0.9719 (3) 0.21605 (18) 0.0542 (5)
C9 0.27715 (11) 0.8166 (3) 0.22553 (18) 0.0515 (5)
H9 0.2784 0.687 0.1702 0.062*
C10 0.42592 (14) 0.7497 (3) 0.0532 (3) 0.0764 (7)
H10A 0.4313 0.6263 0.119 0.115*
H10B 0.4781 0.7572 −0.0033 0.115*
H10C 0.3742 0.7287 −0.0089 0.115*
N2 0.07208 (9) 0.7091 (2) 0.41315 (16) 0.0544 (5)
O5 0.13958 (10) 1.0889 (2) 0.49361 (15) 0.0712 (5)
H5 0.1037 0.9853 0.4903 0.107*
O8 0.41724 (10) 0.9514 (2) 0.13122 (15) 0.0727 (5)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0480 (10) 0.0591 (10) 0.0594 (11) −0.0045 (7) 0.0065 (8) −0.0027 (8)
C3 0.0467 (10) 0.0539 (9) 0.0494 (10) 0.0010 (7) 0.0029 (8) −0.0004 (7)
C4 0.0494 (10) 0.0483 (9) 0.0486 (10) 0.0007 (7) 0.0001 (8) 0.0034 (6)
C5 0.0598 (12) 0.0495 (10) 0.0541 (10) 0.0057 (8) 0.0025 (9) 0.0020 (7)
C6 0.0718 (13) 0.0466 (9) 0.0672 (12) −0.0003 (8) −0.0038 (10) −0.0033 (8)
C7 0.0652 (12) 0.0518 (10) 0.0696 (12) −0.0104 (8) −0.0025 (10) 0.0063 (9)
C8 0.0517 (11) 0.0589 (10) 0.0521 (10) −0.0062 (7) 0.0040 (8) 0.0086 (7)
C9 0.0546 (11) 0.0514 (9) 0.0488 (10) −0.0030 (7) 0.0044 (9) −0.0013 (7)
C10 0.0628 (13) 0.0883 (14) 0.0793 (15) −0.0105 (10) 0.0209 (11) −0.0118 (11)
N2 0.0486 (9) 0.0571 (9) 0.0578 (9) −0.0012 (6) 0.0068 (7) −0.0004 (6)
O5 0.0726 (10) 0.0631 (8) 0.0789 (10) 0.0062 (6) 0.0182 (8) −0.0140 (6)
O8 0.0643 (9) 0.0764 (9) 0.0786 (10) −0.0194 (7) 0.0215 (7) −0.0033 (7)

Geometric parameters (Å, º)

C1—N2 1.455 (2) C6—H6 0.93
C1—C1i 1.515 (3) C7—C8 1.397 (2)
C1—H1A 0.97 C7—H7 0.93
C1—H1B 0.97 C8—O8 1.373 (2)
C3—N2 1.275 (2) C8—C9 1.379 (2)
C3—C4 1.456 (2) C9—H9 0.93
C3—H3 0.93 C10—O8 1.415 (2)
C4—C9 1.405 (2) C10—H10A 0.96
C4—C5 1.408 (2) C10—H10B 0.96
C5—O5 1.350 (2) C10—H10C 0.96
C5—C6 1.391 (3) O5—H5 0.82
C6—C7 1.366 (3)
N2—C1—C1i 109.99 (18) C6—C7—C8 120.91 (16)
N2—C1—H1A 109.7 C6—C7—H7 119.5
C1i—C1—H1A 109.7 C8—C7—H7 119.5
N2—C1—H1B 109.7 O8—C8—C9 125.19 (16)
C1i—C1—H1B 109.7 O8—C8—C7 115.64 (15)
H1A—C1—H1B 108.2 C9—C8—C7 119.18 (17)
N2—C3—C4 121.80 (15) C8—C9—C4 120.69 (16)
N2—C3—H3 119.1 C8—C9—H9 119.7
C4—C3—H3 119.1 C4—C9—H9 119.7
C9—C4—C5 119.26 (16) O8—C10—H10A 109.5
C9—C4—C3 120.03 (15) O8—C10—H10B 109.5
C5—C4—C3 120.68 (16) H10A—C10—H10B 109.5
O5—C5—C6 119.26 (16) O8—C10—H10C 109.5
O5—C5—C4 121.64 (16) H10A—C10—H10C 109.5
C6—C5—C4 119.10 (17) H10B—C10—H10C 109.5
C7—C6—C5 120.86 (16) C3—N2—C1 119.31 (15)
C7—C6—H6 119.6 C5—O5—H5 109.5
C5—C6—H6 119.6 C8—O8—C10 117.41 (14)
N2—C3—C4—C9 179.47 (16) C6—C7—C8—C9 1.2 (3)
N2—C3—C4—C5 1.4 (3) O8—C8—C9—C4 178.87 (17)
C9—C4—C5—O5 −178.94 (15) C7—C8—C9—C4 −0.8 (3)
C3—C4—C5—O5 −0.9 (3) C5—C4—C9—C8 −0.2 (2)
C9—C4—C5—C6 0.8 (2) C3—C4—C9—C8 −178.27 (15)
C3—C4—C5—C6 178.82 (15) C4—C3—N2—C1 −178.95 (15)
O5—C5—C6—C7 179.38 (17) C1i—C1—N2—C3 127.0 (2)
C4—C5—C6—C7 −0.3 (3) C9—C8—O8—C10 −3.6 (3)
C5—C6—C7—C8 −0.7 (3) C7—C8—O8—C10 176.06 (17)
C6—C7—C8—O8 −178.45 (17)

Symmetry code: (i) −x, −y+1, −z+1.

Hydrogen-bond geometry (Å, º)

Cg is the centroid of the C4–C9 ring.

D—H···A D—H H···A D···A D—H···A
O5—H5···N2 0.82 1.85 2.5844 (18) 148
C10—H10C···Cgii 0.96 2.64 3.521 (2) 152

Symmetry code: (ii) x, −y+1/2, z−3/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BQ2353).

References

  1. Brandenburg, K. & Berndt, M. (2001). DIAMOND Crystal Impact GbR, Bonn, Germany.
  2. Burla, M. C., Caliandro, R., Camalli, M., Carrozzini, B., Cascarano, G. L., De Caro, L., Giacovazzo, C., Polidori, G. & Spagna, R. (2005). J. Appl. Cryst. 38, 381–388.
  3. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  4. Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838.
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  6. Nonius (1998). COLLECT Nonius BV, Delft, The Netherlands.
  7. Otwinowski, Z. & Minor, W. (1997). Methods in Enzymology, Vol. 276, Macromolecular Crystallography, Part A, edited by C. W. Carter Jr & R. M. Sweet, pp. 307–326. New York: Academic Press.
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  10. Srinivasan, K., Michaud, P. & Kochi, J. K. (1986). J. Am. Chem. Soc. 108, 2309–2320. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812018405/bq2353sup1.cif

e-68-o1760-sup1.cif (19.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812018405/bq2353Isup2.hkl

e-68-o1760-Isup2.hkl (80.3KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812018405/bq2353Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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