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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 May 23;68(Pt 6):o1870. doi: 10.1107/S1600536812022714

1,5-Bis(2-oxoindolin-3-yl­idene)thio­carbonohydrazide tetra­hydro­furan monosolvate

Shaghayegh Pezeshkpour a, Hamid Khaledi a,*, Hapipah Mohd Ali a
PMCID: PMC3379434  PMID: 22719632

Abstract

In the thio­carbonohydrazide mol­ecule of the title compound, C17H12N6O2S·C4H8O, the terminal indolin-2-one ring systems make a dihedral angle of 20.13 (6)° with each other. Two intra­molecular N—H⋯O hydrogen bonds are present, each of which generates an S(6) ring. In the crystal, N—H⋯O hydrogen bonds lead to a mol­ecular chain running along the b axis. The tetra­hydro­furan solvent mol­ecule is disordered over two orientations in a 0.561 (11):0.439 (11) ratio.

Related literature  

For the structures of the N-methyl­isatin analogue and its Sn(IV) complex and also the spectroscopic characterization of the title thio­carbonohydrazide, see: Bacchi et al. (2005).graphic file with name e-68-o1870-scheme1.jpg

Experimental  

Crystal data  

  • C17H12N6O2S·C4H8O

  • M r = 436.49

  • Triclinic, Inline graphic

  • a = 8.4768 (1) Å

  • b = 11.4765 (2) Å

  • c = 11.9091 (2) Å

  • α = 75.206 (1)°

  • β = 72.553 (1)°

  • γ = 69.416 (1)°

  • V = 1020.02 (3) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.20 mm−1

  • T = 296 K

  • 0.33 × 0.25 × 0.13 mm

Data collection  

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.938, T max = 0.975

  • 9421 measured reflections

  • 4451 independent reflections

  • 3628 reflections with I > 2σ(I)

  • R int = 0.016

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.040

  • wR(F 2) = 0.121

  • S = 1.05

  • 4451 reflections

  • 338 parameters

  • 30 restraints

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.20 e Å−3

  • Δρmin = −0.28 e Å−3

Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812022714/is5142sup1.cif

e-68-o1870-sup1.cif (29.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812022714/is5142Isup2.hkl

e-68-o1870-Isup2.hkl (218KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812022714/is5142Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1⋯O3i 0.88 (1) 1.96 (2) 2.829 (15) 168 (2)
N1—H1⋯O3′i 0.88 (1) 1.98 (3) 2.84 (2) 167 (2)
N3—H3⋯O1 0.85 (1) 2.18 (2) 2.8369 (16) 134 (2)
N4—H4⋯O2 0.86 (1) 2.10 (2) 2.7857 (16) 136 (2)
N6—H6⋯O1ii 0.84 (1) 2.32 (2) 3.0522 (16) 146 (2)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

We thank the University of Malaya for funding this study (ERGS grant No. ER009–2011 A).

supplementary crystallographic information

Comment

Recently, a series of isatin-based thiocarbonohydrazides and the related Sn(IV) complexes were synthesized and studied for their antimicrobial and mutagenic properties (Bacchi et al., 2005). The title compound, being among those, was re-synthesized and grown as X-ray quality crystals from THF by our research group. In the crystal structure, the hydrazone molecule is roughly planar with the maximum deviation from the least-squares plane of all non-H atoms being 0.481 (2) Å for atom C14. The configurations around the C—N bonds, stabilized by intramolecular N—H···O hydrogen bonding (Table 1), are same as those observed in the N-methylisatin analogous. The hydrazone molecule is co-crystallized with one molecule of THF which suffers from disorder. The crystal packing contains chains along the b axis formed by intermolecular N6—H6···O1 hydrogen bonds (Table 1 and Fig. 2). The THF molecules are N—H···O bonded to the chain.

Experimental

The Schiff base was prepared as described previously (Bacchi et al., 2005) and grown as X-ray quality crystals from a THF solution at room temperature.

Refinement

C-bound hydrogen atoms were placed at the calculated positions and refined in riding mode with C—H distances of 0.93 Å. The amino hydrogen atoms were located in a difference Fourier map and refined with N—H distance restraints of 0.86 (2) Å. For all the hydrogen atoms Uiso(H) were set to 1.2 Ueq(carrier atoms). The tetrahydrofuran molecule was found to be disordered over two positions, the site occupancy factor for the major component refined to 0.561 (11). The geometrical parameters of the two disordered components were kept similar by using the SAME command in SHELXL97.

Figures

Fig. 1.

Fig. 1.

Displacement ellipsoid plot of the title compound at the 30% probability level. Hydrogen atoms are drawn as spheres of arbitrary radius. Only the major component of the disordered tetrahydrofuran molecule is shown.

Fig. 2.

Fig. 2.

A packing diagram, showing the N—H···O hydrogen bonded chain along the b axis. Hydrogen bonds are depicted as red dashed lines.

Crystal data

C17H12N6O2S·C4H8O Z = 2
Mr = 436.49 F(000) = 456
Triclinic, P1 Dx = 1.421 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 8.4768 (1) Å Cell parameters from 4598 reflections
b = 11.4765 (2) Å θ = 2.4–29.1°
c = 11.9091 (2) Å µ = 0.20 mm1
α = 75.206 (1)° T = 296 K
β = 72.553 (1)° Block, yellow
γ = 69.416 (1)° 0.33 × 0.25 × 0.13 mm
V = 1020.02 (3) Å3

Data collection

Bruker APEXII CCD diffractometer 4451 independent reflections
Radiation source: fine-focus sealed tube 3628 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.016
φ and ω scans θmax = 27.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −10→10
Tmin = 0.938, Tmax = 0.975 k = −14→14
9421 measured reflections l = −15→15

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.121 H atoms treated by a mixture of independent and constrained refinement
S = 1.05 w = 1/[σ2(Fo2) + (0.0692P)2 + 0.1602P] where P = (Fo2 + 2Fc2)/3
4451 reflections (Δ/σ)max = 0.001
338 parameters Δρmax = 0.20 e Å3
30 restraints Δρmin = −0.28 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq Occ. (<1)
S1 0.05012 (6) 0.21013 (4) 0.21038 (4) 0.05637 (15)
O1 0.25587 (17) −0.15327 (11) 0.48629 (10) 0.0564 (3)
O2 0.20530 (16) 0.44464 (11) 0.49172 (9) 0.0529 (3)
N1 0.38131 (19) −0.19240 (13) 0.64563 (12) 0.0498 (3)
H1 0.402 (2) −0.2746 (14) 0.6651 (16) 0.060*
N2 0.21787 (17) 0.11827 (12) 0.49897 (11) 0.0435 (3)
N3 0.16236 (18) 0.11149 (12) 0.40644 (12) 0.0455 (3)
H3 0.163 (2) 0.0406 (14) 0.3970 (16) 0.055*
N4 0.13631 (18) 0.32009 (11) 0.34784 (11) 0.0437 (3)
H4 0.167 (2) 0.3167 (17) 0.4115 (13) 0.052*
N5 0.11499 (16) 0.42919 (11) 0.26740 (11) 0.0411 (3)
N6 0.18651 (18) 0.64925 (12) 0.39333 (11) 0.0470 (3)
H6 0.217 (2) 0.6750 (18) 0.4406 (15) 0.056*
C1 0.3000 (2) −0.11911 (14) 0.55902 (13) 0.0448 (3)
C2 0.2764 (2) 0.01502 (14) 0.56776 (13) 0.0417 (3)
C3 0.3419 (2) 0.00786 (15) 0.66947 (13) 0.0442 (3)
C4 0.3523 (3) 0.09899 (18) 0.72112 (17) 0.0617 (5)
H4A 0.3114 0.1843 0.6909 0.074*
C5 0.4251 (3) 0.0596 (2) 0.81909 (18) 0.0709 (5)
H5 0.4332 0.1193 0.8555 0.085*
C6 0.4860 (3) −0.0675 (2) 0.86359 (16) 0.0634 (5)
H6A 0.5342 −0.0916 0.9297 0.076*
C7 0.4769 (2) −0.15979 (17) 0.81209 (14) 0.0542 (4)
H7 0.5184 −0.2451 0.8421 0.065*
C8 0.4042 (2) −0.11990 (15) 0.71482 (13) 0.0441 (3)
C9 0.1173 (2) 0.21704 (14) 0.32405 (13) 0.0423 (3)
C10 0.1806 (2) 0.52963 (14) 0.40708 (13) 0.0425 (3)
C11 0.13649 (18) 0.52272 (13) 0.29545 (12) 0.0388 (3)
C12 0.12560 (19) 0.64527 (13) 0.21980 (13) 0.0399 (3)
C13 0.0978 (2) 0.69308 (15) 0.10567 (13) 0.0469 (4)
H13 0.0746 0.6448 0.0641 0.056*
C14 0.1054 (2) 0.81390 (16) 0.05535 (15) 0.0558 (4)
H14 0.0881 0.8473 −0.0213 0.067*
C15 0.1386 (3) 0.88613 (16) 0.11776 (17) 0.0600 (5)
H15 0.1432 0.9674 0.0820 0.072*
C16 0.1649 (2) 0.84010 (15) 0.23188 (16) 0.0544 (4)
H16 0.1860 0.8891 0.2737 0.065*
C17 0.1587 (2) 0.71911 (14) 0.28141 (13) 0.0426 (3)
O3 0.446 (3) 0.5472 (16) 0.7408 (9) 0.054 (3) 0.561 (11)
C18 0.3597 (15) 0.4754 (11) 0.7110 (8) 0.073 (3) 0.561 (11)
H18C 0.4432 0.4071 0.6710 0.087* 0.561 (11)
H18D 0.2833 0.5288 0.6592 0.087* 0.561 (11)
C19 0.2583 (7) 0.4248 (5) 0.8281 (7) 0.0748 (19) 0.561 (11)
H19C 0.2449 0.3451 0.8256 0.090* 0.561 (11)
H19D 0.1447 0.4843 0.8505 0.090* 0.561 (11)
C20 0.3706 (7) 0.4076 (5) 0.9136 (5) 0.0656 (13) 0.561 (11)
H20C 0.3065 0.4015 0.9963 0.079* 0.561 (11)
H20D 0.4731 0.3351 0.9042 0.079* 0.561 (11)
C21 0.4135 (17) 0.5314 (11) 0.8674 (8) 0.062 (2) 0.561 (11)
H21C 0.3172 0.6007 0.8976 0.075* 0.561 (11)
H21D 0.5151 0.5278 0.8914 0.075* 0.561 (11)
O3' 0.471 (3) 0.545 (2) 0.7353 (11) 0.049 (2) 0.439 (11)
C18' 0.3702 (17) 0.5049 (11) 0.6829 (10) 0.058 (2) 0.439 (11)
H18A 0.4341 0.4837 0.6047 0.070* 0.439 (11)
H18B 0.2623 0.5705 0.6754 0.070* 0.439 (11)
C19' 0.3368 (12) 0.3903 (7) 0.7693 (8) 0.078 (2) 0.439 (11)
H19A 0.4385 0.3170 0.7618 0.094* 0.439 (11)
H19B 0.2398 0.3711 0.7591 0.094* 0.439 (11)
C20' 0.2948 (18) 0.4357 (11) 0.8886 (8) 0.109 (4) 0.439 (11)
H20A 0.1763 0.4895 0.9079 0.131* 0.439 (11)
H20B 0.3140 0.3652 0.9535 0.131* 0.439 (11)
C21' 0.4234 (19) 0.5088 (14) 0.8621 (11) 0.062 (3) 0.439 (11)
H21A 0.3714 0.5832 0.9000 0.074* 0.439 (11)
H21B 0.5249 0.4567 0.8922 0.074* 0.439 (11)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.0781 (3) 0.0465 (2) 0.0592 (3) −0.0176 (2) −0.0398 (2) −0.00685 (18)
O1 0.0811 (8) 0.0489 (6) 0.0550 (7) −0.0291 (6) −0.0329 (6) −0.0013 (5)
O2 0.0720 (8) 0.0532 (6) 0.0403 (6) −0.0235 (6) −0.0238 (5) 0.0002 (5)
N1 0.0666 (9) 0.0398 (7) 0.0513 (8) −0.0214 (6) −0.0276 (7) 0.0027 (6)
N2 0.0528 (7) 0.0407 (6) 0.0406 (6) −0.0147 (5) −0.0171 (5) −0.0045 (5)
N3 0.0621 (8) 0.0359 (6) 0.0462 (7) −0.0167 (6) −0.0251 (6) −0.0024 (5)
N4 0.0616 (8) 0.0368 (6) 0.0390 (6) −0.0157 (6) −0.0221 (6) −0.0031 (5)
N5 0.0518 (7) 0.0361 (6) 0.0380 (6) −0.0123 (5) −0.0171 (5) −0.0041 (5)
N6 0.0634 (8) 0.0460 (7) 0.0417 (7) −0.0197 (6) −0.0196 (6) −0.0108 (5)
C1 0.0539 (9) 0.0416 (8) 0.0438 (8) −0.0205 (7) −0.0171 (7) 0.0002 (6)
C2 0.0484 (8) 0.0412 (7) 0.0386 (7) −0.0162 (6) −0.0132 (6) −0.0042 (6)
C3 0.0511 (8) 0.0457 (8) 0.0376 (7) −0.0151 (6) −0.0140 (6) −0.0046 (6)
C4 0.0863 (13) 0.0511 (9) 0.0559 (10) −0.0162 (9) −0.0307 (9) −0.0118 (8)
C5 0.1002 (16) 0.0693 (12) 0.0592 (11) −0.0239 (11) −0.0358 (11) −0.0190 (9)
C6 0.0763 (12) 0.0757 (12) 0.0461 (9) −0.0234 (10) −0.0281 (9) −0.0061 (8)
C7 0.0612 (10) 0.0577 (10) 0.0451 (8) −0.0196 (8) −0.0212 (7) 0.0023 (7)
C8 0.0474 (8) 0.0483 (8) 0.0396 (7) −0.0197 (7) −0.0124 (6) −0.0017 (6)
C9 0.0478 (8) 0.0392 (7) 0.0431 (8) −0.0128 (6) −0.0159 (6) −0.0062 (6)
C10 0.0492 (8) 0.0453 (8) 0.0374 (7) −0.0155 (6) −0.0140 (6) −0.0080 (6)
C11 0.0450 (8) 0.0382 (7) 0.0350 (7) −0.0121 (6) −0.0124 (6) −0.0063 (5)
C12 0.0451 (8) 0.0370 (7) 0.0387 (7) −0.0116 (6) −0.0115 (6) −0.0069 (6)
C13 0.0564 (9) 0.0452 (8) 0.0407 (8) −0.0138 (7) −0.0158 (7) −0.0065 (6)
C14 0.0693 (11) 0.0483 (9) 0.0450 (8) −0.0145 (8) −0.0188 (8) 0.0026 (7)
C15 0.0777 (12) 0.0387 (8) 0.0625 (10) −0.0189 (8) −0.0206 (9) 0.0008 (7)
C16 0.0696 (11) 0.0410 (8) 0.0587 (10) −0.0185 (7) −0.0184 (8) −0.0118 (7)
C17 0.0483 (8) 0.0388 (7) 0.0423 (8) −0.0110 (6) −0.0130 (6) −0.0092 (6)
O3 0.066 (6) 0.049 (3) 0.053 (3) −0.023 (4) −0.019 (2) −0.003 (2)
C18 0.085 (4) 0.078 (7) 0.080 (4) −0.035 (4) −0.037 (3) −0.019 (4)
C19 0.059 (3) 0.053 (2) 0.115 (5) −0.020 (2) −0.028 (3) −0.005 (3)
C20 0.070 (3) 0.053 (2) 0.073 (3) −0.0203 (19) −0.032 (2) 0.0115 (18)
C21 0.098 (6) 0.048 (3) 0.041 (3) −0.029 (4) −0.004 (3) −0.012 (2)
O3' 0.055 (5) 0.054 (4) 0.047 (4) −0.015 (2) −0.021 (3) −0.014 (3)
C18' 0.057 (4) 0.047 (4) 0.080 (5) −0.012 (3) −0.029 (4) −0.016 (4)
C19' 0.072 (4) 0.057 (3) 0.112 (5) −0.028 (3) −0.014 (4) −0.022 (3)
C20' 0.152 (11) 0.123 (8) 0.079 (5) −0.090 (8) −0.025 (6) 0.009 (5)
C21' 0.066 (5) 0.059 (6) 0.059 (5) −0.005 (3) −0.016 (3) −0.023 (3)

Geometric parameters (Å, º)

S1—C9 1.6467 (15) C13—H13 0.9300
O1—C1 1.2307 (18) C14—C15 1.387 (3)
O2—C10 1.2215 (18) C14—H14 0.9300
N1—C1 1.350 (2) C15—C16 1.381 (3)
N1—C8 1.403 (2) C15—H15 0.9300
N1—H1 0.877 (14) C16—C17 1.376 (2)
N2—C2 1.2868 (19) C16—H16 0.9300
N2—N3 1.3498 (17) O3—C21 1.424 (9)
N3—C9 1.3670 (19) O3—C18 1.438 (9)
N3—H3 0.847 (14) C18—C19 1.496 (9)
N4—C9 1.3557 (19) C18—H18C 0.9700
N4—N5 1.3601 (17) C18—H18D 0.9700
N4—H4 0.860 (14) C19—C20 1.527 (6)
N5—C11 1.2861 (18) C19—H19C 0.9700
N6—C10 1.357 (2) C19—H19D 0.9700
N6—C17 1.4088 (19) C20—C21 1.516 (9)
N6—H6 0.837 (14) C20—H20C 0.9700
C1—C2 1.508 (2) C20—H20D 0.9700
C2—C3 1.450 (2) C21—H21C 0.9700
C3—C4 1.380 (2) C21—H21D 0.9700
C3—C8 1.394 (2) O3'—C21' 1.430 (11)
C4—C5 1.383 (3) O3'—C18' 1.438 (11)
C4—H4A 0.9300 C18'—C19' 1.504 (9)
C5—C6 1.384 (3) C18'—H18A 0.9700
C5—H5 0.9300 C18'—H18B 0.9700
C6—C7 1.386 (3) C19'—C20' 1.536 (10)
C6—H6A 0.9300 C19'—H19A 0.9700
C7—C8 1.375 (2) C19'—H19B 0.9700
C7—H7 0.9300 C20'—C21' 1.515 (11)
C10—C11 1.5123 (19) C20'—H20A 0.9700
C11—C12 1.4525 (19) C20'—H20B 0.9700
C12—C13 1.387 (2) C21'—H21A 0.9700
C12—C17 1.394 (2) C21'—H21B 0.9700
C13—C14 1.379 (2)
C1—N1—C8 111.71 (13) C14—C15—H15 119.3
C1—N1—H1 124.8 (13) C17—C16—C15 117.62 (15)
C8—N1—H1 122.7 (13) C17—C16—H16 121.2
C2—N2—N3 118.31 (12) C15—C16—H16 121.2
N2—N3—C9 119.91 (12) C16—C17—C12 121.62 (14)
N2—N3—H3 119.6 (12) C16—C17—N6 128.80 (14)
C9—N3—H3 120.3 (12) C12—C17—N6 109.57 (12)
C9—N4—N5 119.78 (12) C21—O3—C18 108.8 (8)
C9—N4—H4 121.0 (12) O3—C18—C19 104.9 (7)
N5—N4—H4 119.1 (12) O3—C18—H18C 110.8
C11—N5—N4 116.37 (12) C19—C18—H18C 110.8
C10—N6—C17 111.43 (12) O3—C18—H18D 110.8
C10—N6—H6 124.2 (13) C19—C18—H18D 110.8
C17—N6—H6 123.8 (13) H18C—C18—H18D 108.8
O1—C1—N1 127.78 (14) C18—C19—C20 102.6 (5)
O1—C1—C2 126.52 (14) C18—C19—H19C 111.3
N1—C1—C2 105.69 (12) C20—C19—H19C 111.3
N2—C2—C3 124.33 (14) C18—C19—H19D 111.3
N2—C2—C1 129.33 (13) C20—C19—H19D 111.3
C3—C2—C1 106.29 (12) H19C—C19—H19D 109.2
C4—C3—C8 120.65 (15) C21—C20—C19 97.6 (5)
C4—C3—C2 132.58 (15) C21—C20—H20C 112.2
C8—C3—C2 106.77 (13) C19—C20—H20C 112.2
C3—C4—C5 118.04 (17) C21—C20—H20D 112.2
C3—C4—H4A 121.0 C19—C20—H20D 112.2
C5—C4—H4A 121.0 H20C—C20—H20D 109.8
C4—C5—C6 120.79 (18) O3—C21—C20 105.2 (8)
C4—C5—H5 119.6 O3—C21—H21C 110.7
C6—C5—H5 119.6 C20—C21—H21C 110.7
C5—C6—C7 121.64 (16) O3—C21—H21D 110.7
C5—C6—H6A 119.2 C20—C21—H21D 110.7
C7—C6—H6A 119.2 H21C—C21—H21D 108.8
C8—C7—C6 117.22 (16) C21'—O3'—C18' 108.2 (10)
C8—C7—H7 121.4 O3'—C18'—C19' 103.9 (9)
C6—C7—H7 121.4 O3'—C18'—H18A 111.0
C7—C8—C3 121.65 (15) C19'—C18'—H18A 111.0
C7—C8—N1 128.92 (15) O3'—C18'—H18B 111.0
C3—C8—N1 109.42 (13) C19'—C18'—H18B 111.0
N4—C9—N3 112.67 (13) H18A—C18'—H18B 109.0
N4—C9—S1 126.85 (11) C18'—C19'—C20' 100.5 (7)
N3—C9—S1 120.48 (11) C18'—C19'—H19A 111.7
O2—C10—N6 127.57 (14) C20'—C19'—H19A 111.7
O2—C10—C11 126.71 (13) C18'—C19'—H19B 111.7
N6—C10—C11 105.72 (12) C20'—C19'—H19B 111.7
N5—C11—C12 124.64 (13) H19A—C19'—H19B 109.4
N5—C11—C10 129.04 (13) C21'—C20'—C19' 101.2 (8)
C12—C11—C10 106.31 (12) C21'—C20'—H20A 111.5
C13—C12—C17 120.17 (13) C19'—C20'—H20A 111.5
C13—C12—C11 132.86 (13) C21'—C20'—H20B 111.5
C17—C12—C11 106.91 (12) C19'—C20'—H20B 111.5
C14—C13—C12 118.37 (15) H20A—C20'—H20B 109.3
C14—C13—H13 120.8 O3'—C21'—C20' 107.5 (9)
C12—C13—H13 120.8 O3'—C21'—H21A 110.2
C13—C14—C15 120.77 (15) C20'—C21'—H21A 110.2
C13—C14—H14 119.6 O3'—C21'—H21B 110.2
C15—C14—H14 119.6 C20'—C21'—H21B 110.2
C16—C15—C14 121.45 (15) H21A—C21'—H21B 108.5
C16—C15—H15 119.3

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N1—H1···O3i 0.88 (1) 1.96 (2) 2.829 (15) 168 (2)
N1—H1···O3′i 0.88 (1) 1.98 (3) 2.84 (2) 167 (2)
N3—H3···O1 0.85 (1) 2.18 (2) 2.8369 (16) 134 (2)
N4—H4···O2 0.86 (1) 2.10 (2) 2.7857 (16) 136 (2)
N6—H6···O1ii 0.84 (1) 2.32 (2) 3.0522 (16) 146 (2)

Symmetry codes: (i) x, y−1, z; (ii) x, y+1, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: IS5142).

References

  1. Bacchi, A., Carcelli, M., Pelagatti, P., Pelizzi, G., Rodriguez-Arguelles, M. C., Rogolino, D., Solinas, C. & Zani, F. (2005). J. Inorg. Biochem. 99, 397–408. [DOI] [PubMed]
  2. Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191.
  3. Bruker (2007). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  4. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812022714/is5142sup1.cif

e-68-o1870-sup1.cif (29.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812022714/is5142Isup2.hkl

e-68-o1870-Isup2.hkl (218KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812022714/is5142Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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