Abstract
The essentially planar pyrazole ring (r.m.s. deviation = 0.013 Å) in the title hemisolvate, C31H33N7S·0.5C3H7NO, is almost coplanar with the pendant thiourea residue [N—N—C—S torsion angle = −173.2 (4)°] and slightly twisted with respect to the triazole ring [dihedral angle = 7.7 (3)°]. An intramolecular thiourea–pyrazole N—H⋯N hydrogen bond, via an S(5) loop, is formed. Supramolecular chains along the c axis are formed in the crystal via piperidine–triazole C—H⋯N interactions. These are bridged into loosely associated double chains via C—H⋯O interactions involving the disordered (over two positions) dimethylformamide solvent molecules. The thiourea-bound phenyl ring is also disordered over two positions of equal occupancy.
Related literature
For the biological activity of related compounds, see: Abdel-Wahab et al. (2009 ▶, 2012a
▶). For a related pyrazolyl-1,2,3-triazole structure, see: Abdel-Wahab et al. (2012b
▶).
Experimental
Crystal data
C31H33N7S·0.5C3H7NO
M r = 522.26
Monoclinic,
a = 42.077 (4) Å
b = 5.9274 (5) Å
c = 12.0737 (11) Å
β = 105.665 (9)°
V = 2899.5 (4) Å3
Z = 4
Cu Kα radiation
μ = 1.29 mm−1
T = 100 K
0.35 × 0.15 × 0.05 mm
Data collection
Agilent SuperNova Dual diffractometer with an Atlas detector
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012 ▶) T min = 0.661, T max = 0.938
10437 measured reflections
3317 independent reflections
3229 reflections with I > 2σ(I)
R int = 0.037
Refinement
R[F 2 > 2σ(F 2)] = 0.091
wR(F 2) = 0.214
S = 1.11
3317 reflections
396 parameters
41 restraints
H-atom parameters constrained
Δρmax = 0.71 e Å−3
Δρmin = −1.06 e Å−3
Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶).
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812024488/xu5554sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812024488/xu5554Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812024488/xu5554Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N1—H1⋯N3 | 0.88 | 2.13 | 2.597 (8) | 112 |
| C13—H13A⋯O1 | 0.98 | 2.56 | 3.466 (14) | 154 |
| C28—H28B⋯N5i | 0.99 | 2.57 | 3.355 (10) | 137 |
Symmetry code: (i)
.
Acknowledgments
We thank the Ministry of Higher Education (Malaysia) for funding structural studies through the High-Impact Research scheme (UM.C/HIR/MOHE/SC/12).
supplementary crystallographic information
Comment
The synthesis and crystallographic characterization of the title compound was motivated by the established biological activities exhibited by related 3-(benzofuran-2-yl)-4,5-dihydro-5-phenyl-1-(4-phenylthiazol-2-yl)-1H-pyrazole and 1,2,3-triazol-4-yl-pyrazolylthiazoles (Abdel-Wahab et al. 2012a; Abdel-Wahab et al. 2009) and accompanying structural studies (Abdel-Wahab et al., 2012b).
In (I), Fig. 1, the pyrazole ring is planar with a r.m.s. deviation = 0.013 Å; the maximum deviation is 0.005 (6) Å for the N2 atom. The thiourea group is close to co-planar with the ring [the N3—N2—C7—S1 torsion angle = -173.2 (4)°] and the connected triazole ring is slightly twisted out of the plane [dihedral angle = 7.7 (3)°]. There is a significant twist between the triazole and attached benzene rings with the dihedral angle being 49.4 (3)°. The conformation of the piperidinyl ring is close to a chair. The thiourea-N—H atom is orientated towards the pyrazole-N3 atom and forms a hydrogen bond via an S(5) loop, Table 1.
In the crystal packing, connections between molecules are of the type piperidinyl-C—H···N(triazole), Table 1, leading to the formation of a supramolecular chain along the c axis. Two chains are connected by the (disordered) dimethylformamide molecules via methyl-C13—H···O1 interactions into a loosely associated double chain, Fig. 2 and Table 1.
Experimental
The title compound was prepared according to the reported method (Abdel-Wahab et al., 2012a). Crystals were obtained from its DMF solution by slow evaporation at room temperature.
Refinement
The H-atoms were placed in calculated positions [N—H = 0.88 Å; C—H = 0.95 to 0.98 Å, Uiso(H) = 1.2–1.5Ueq(N,C)] and were included in the refinement in the riding model approximation.
The phenyl ring is disordered over two positions in an assumed 1:1 ratio; the ring was refined as a rigid hexagon with 1.39 Å sides. The displacement factors of the primed atoms were set to those of the unprimed ones.
The DMF molecule is disordered over a twofold rotation axis. The C—O distance was restrained to 1.25±0.01 Å and the N–Ccarbonyl distance to 1.35±0.01 Å; the other two N–C distances were restrained to 1.45±0.01 Å. Additionally, the 1,3-related distances were also restrained. The anisotropic displacement parameters were tightly restrained to be nearly isotropic.
The absolute structure could not be refined despite the presence of a sulfur atom as the crystal is a racemic twin; 1153 Friedel pairs were merged.
The maximum and minimum residual electron density peaks of 0.71 and 1.06 e Å-3, respectively, were located 0.71 Å and 0.82 Å, respectively, from the S1 atom.
A reflection, i.e. (-3 1 3), was omitted owing to poor agreement.
Figures
Fig. 1.
The molecular structure of (I) showing the atom-labelling scheme and displacement ellipsoids at the 50% probability level.
Fig. 2.
A view of a supramolecular chain along the c axis in (I). The dimethylformamide molecule is disordered over two positions. The C—H···O and C—H···N interactions are shown as orange and blue dashed lines, respectively.
Crystal data
| C31H33N7S·0.5C3H7NO | F(000) = 1216 |
| Mr = 522.26 | Dx = 1.311 Mg m−3 |
| Monoclinic, C2 | Cu Kα radiation, λ = 1.54184 Å |
| Hall symbol: C 2y | Cell parameters from 6358 reflections |
| a = 42.077 (4) Å | θ = 3.8–76.9° |
| b = 5.9274 (5) Å | µ = 1.29 mm−1 |
| c = 12.0737 (11) Å | T = 100 K |
| β = 105.665 (9)° | Prism, light-brown |
| V = 2899.5 (4) Å3 | 0.35 × 0.15 × 0.05 mm |
| Z = 4 |
Data collection
| Agilent SuperNova Dual diffractometer with an Atlas detector | 3317 independent reflections |
| Radiation source: SuperNova (Cu) X-ray Source | 3229 reflections with I > 2σ(I) |
| Mirror monochromator | Rint = 0.037 |
| Detector resolution: 10.4041 pixels mm-1 | θmax = 77.1°, θmin = 3.8° |
| ω scan | h = −52→49 |
| Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012) | k = −5→7 |
| Tmin = 0.661, Tmax = 0.938 | l = −14→15 |
| 10437 measured reflections |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.091 | H-atom parameters constrained |
| wR(F2) = 0.214 | w = 1/[σ2(Fo2) + (0.0422P)2 + 29.4613P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.11 | (Δ/σ)max = 0.001 |
| 3317 reflections | Δρmax = 0.71 e Å−3 |
| 396 parameters | Δρmin = −1.06 e Å−3 |
| 41 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.00150 (17) |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | Occ. (<1) | |
| S1 | 0.59659 (4) | 0.0014 (4) | 0.47105 (16) | 0.0329 (5) | |
| N1 | 0.56945 (14) | 0.4011 (13) | 0.5037 (5) | 0.0306 (14) | |
| H1 | 0.5726 | 0.5285 | 0.5426 | 0.037* | |
| N2 | 0.61985 (13) | 0.3203 (11) | 0.6223 (5) | 0.0250 (13) | |
| N3 | 0.61644 (13) | 0.5210 (12) | 0.6819 (5) | 0.0251 (12) | |
| N4 | 0.67600 (14) | 0.7524 (12) | 0.9292 (5) | 0.0282 (13) | |
| N5 | 0.67224 (14) | 0.9126 (13) | 1.0004 (5) | 0.0304 (14) | |
| N6 | 0.64025 (13) | 0.9852 (13) | 0.9628 (5) | 0.0267 (13) | |
| N7 | 0.72517 (13) | 0.4072 (12) | 0.3176 (5) | 0.0261 (13) | |
| C1 | 0.53887 (17) | 0.3838 (17) | 0.4206 (10) | 0.0259 (16) | 0.50 |
| C2 | 0.5261 (2) | 0.2040 (15) | 0.3484 (10) | 0.029 (2) | 0.50 |
| H2 | 0.5391 | 0.0727 | 0.3489 | 0.035* | 0.50 |
| C3 | 0.4944 (2) | 0.2165 (17) | 0.2753 (9) | 0.036 (3) | 0.50 |
| H3 | 0.4856 | 0.0936 | 0.2259 | 0.043* | 0.50 |
| C4 | 0.47537 (19) | 0.409 (2) | 0.2745 (10) | 0.032 (3) | 0.50 |
| H4 | 0.4537 | 0.4172 | 0.2245 | 0.038* | 0.50 |
| C5 | 0.4881 (2) | 0.5885 (16) | 0.3467 (10) | 0.034 (3) | 0.50 |
| H5 | 0.4752 | 0.7199 | 0.3462 | 0.041* | 0.50 |
| C6 | 0.5199 (2) | 0.5761 (14) | 0.4198 (9) | 0.029 (2) | 0.50 |
| H6 | 0.5286 | 0.6989 | 0.4692 | 0.035* | 0.50 |
| C1' | 0.53743 (17) | 0.3832 (17) | 0.4284 (9) | 0.0259 (16) | 0.50 |
| C2' | 0.5190 (2) | 0.1876 (15) | 0.4256 (9) | 0.029 (2) | 0.50 |
| H2' | 0.5279 | 0.0650 | 0.4749 | 0.035* | 0.50 |
| C3' | 0.4875 (2) | 0.1716 (15) | 0.3507 (10) | 0.036 (3) | 0.50 |
| H3' | 0.4749 | 0.0380 | 0.3489 | 0.043* | 0.50 |
| C4' | 0.4745 (2) | 0.3511 (19) | 0.2787 (10) | 0.032 (3) | 0.50 |
| H4' | 0.4530 | 0.3401 | 0.2275 | 0.038* | 0.50 |
| C5' | 0.4929 (2) | 0.5466 (16) | 0.2814 (9) | 0.034 (3) | 0.50 |
| H5' | 0.4840 | 0.6693 | 0.2322 | 0.041* | 0.50 |
| C6' | 0.5244 (2) | 0.5627 (14) | 0.3563 (10) | 0.029 (2) | 0.50 |
| H6' | 0.5370 | 0.6963 | 0.3582 | 0.035* | 0.50 |
| C7 | 0.59446 (16) | 0.2551 (14) | 0.5330 (6) | 0.0261 (15) | |
| C8 | 0.65420 (15) | 0.2319 (14) | 0.6552 (6) | 0.0252 (15) | |
| H8 | 0.6543 | 0.0662 | 0.6708 | 0.030* | |
| C9 | 0.66858 (15) | 0.3640 (15) | 0.7684 (6) | 0.0281 (16) | |
| H9A | 0.6707 | 0.2663 | 0.8366 | 0.034* | |
| H9B | 0.6904 | 0.4294 | 0.7710 | 0.034* | |
| C10 | 0.64330 (16) | 0.5443 (13) | 0.7621 (5) | 0.0240 (15) | |
| C11 | 0.64669 (17) | 0.7263 (13) | 0.8469 (6) | 0.0246 (14) | |
| C12 | 0.62375 (16) | 0.8719 (14) | 0.8666 (6) | 0.0263 (15) | |
| C13 | 0.58794 (16) | 0.9065 (15) | 0.8053 (6) | 0.0305 (16) | |
| H13A | 0.5758 | 0.9465 | 0.8612 | 0.046* | |
| H13B | 0.5788 | 0.7670 | 0.7656 | 0.046* | |
| H13C | 0.5858 | 1.0285 | 0.7490 | 0.046* | |
| C14 | 0.62887 (16) | 1.1423 (14) | 1.0318 (6) | 0.0276 (16) | |
| C15 | 0.61095 (18) | 1.3329 (15) | 0.9829 (7) | 0.0327 (17) | |
| H15 | 0.6065 | 1.3611 | 0.9027 | 0.039* | |
| C16 | 0.59990 (19) | 1.4774 (16) | 1.0516 (7) | 0.0354 (17) | |
| H16 | 0.5872 | 1.6041 | 1.0173 | 0.043* | |
| C17 | 0.6065 (2) | 1.4476 (13) | 1.1719 (8) | 0.0363 (19) | |
| C18 | 0.6245 (2) | 1.2523 (16) | 1.2175 (7) | 0.0360 (18) | |
| H18 | 0.6292 | 1.2239 | 1.2977 | 0.043* | |
| C19 | 0.63557 (19) | 1.1015 (16) | 1.1493 (6) | 0.0343 (17) | |
| H19 | 0.6476 | 0.9712 | 1.1822 | 0.041* | |
| C20 | 0.5944 (2) | 1.6067 (17) | 1.2460 (8) | 0.047 (2) | |
| H20A | 0.5827 | 1.5227 | 1.2929 | 0.071* | |
| H20B | 0.5793 | 1.7156 | 1.1977 | 0.071* | |
| H20C | 0.6131 | 1.6871 | 1.2964 | 0.071* | |
| C21 | 0.67202 (16) | 0.2810 (14) | 0.5649 (6) | 0.0269 (16) | |
| C22 | 0.67004 (19) | 0.4876 (16) | 0.5091 (7) | 0.0350 (17) | |
| H22 | 0.6565 | 0.6026 | 0.5273 | 0.042* | |
| C23 | 0.68695 (17) | 0.5317 (14) | 0.4285 (6) | 0.0305 (16) | |
| H23 | 0.6848 | 0.6751 | 0.3921 | 0.037* | |
| C24 | 0.70737 (16) | 0.3670 (14) | 0.3994 (6) | 0.0258 (15) | |
| C25 | 0.70995 (18) | 0.1619 (14) | 0.4574 (6) | 0.0291 (16) | |
| H25 | 0.7240 | 0.0480 | 0.4417 | 0.035* | |
| C26 | 0.69243 (17) | 0.1197 (13) | 0.5380 (6) | 0.0280 (15) | |
| H26 | 0.6946 | −0.0229 | 0.5751 | 0.034* | |
| C27 | 0.71379 (18) | 0.5951 (15) | 0.2389 (7) | 0.0318 (17) | |
| H27A | 0.7099 | 0.7279 | 0.2832 | 0.038* | |
| H27B | 0.6925 | 0.5540 | 0.1838 | 0.038* | |
| C28 | 0.73850 (18) | 0.6574 (14) | 0.1727 (6) | 0.0293 (16) | |
| H28A | 0.7592 | 0.7105 | 0.2270 | 0.035* | |
| H28B | 0.7295 | 0.7818 | 0.1187 | 0.035* | |
| C29 | 0.74577 (18) | 0.4548 (15) | 0.1060 (6) | 0.0333 (19) | |
| H29A | 0.7254 | 0.4055 | 0.0486 | 0.040* | |
| H29B | 0.7624 | 0.4954 | 0.0650 | 0.040* | |
| C30 | 0.75863 (18) | 0.2688 (15) | 0.1902 (6) | 0.0307 (17) | |
| H30A | 0.7801 | 0.3149 | 0.2423 | 0.037* | |
| H30B | 0.7624 | 0.1328 | 0.1479 | 0.037* | |
| C31 | 0.73474 (18) | 0.2102 (14) | 0.2620 (7) | 0.0313 (17) | |
| H31A | 0.7147 | 0.1397 | 0.2115 | 0.038* | |
| H31B | 0.7453 | 0.0985 | 0.3215 | 0.038* | |
| O1 | 0.5327 (3) | 0.8817 (18) | 0.9722 (10) | 0.051 (3) | 0.50 |
| N8 | 0.4987 (3) | 1.1815 (15) | 0.9647 (8) | 0.039 (4) | 0.50 |
| C32 | 0.5278 (3) | 1.0766 (18) | 1.0017 (9) | 0.041 (4) | 0.50 |
| H32 | 0.5455 | 1.1547 | 1.0528 | 0.049* | 0.50 |
| C33 | 0.4703 (3) | 1.078 (3) | 0.8870 (13) | 0.051 (5) | 0.50 |
| H33A | 0.4768 | 0.9346 | 0.8593 | 0.077* | 0.50 |
| H33B | 0.4615 | 1.1789 | 0.8215 | 0.077* | 0.50 |
| H33C | 0.4534 | 1.0509 | 0.9274 | 0.077* | 0.50 |
| C34 | 0.4944 (4) | 1.4106 (18) | 1.002 (2) | 0.043 (5) | 0.50 |
| H34A | 0.5155 | 1.4673 | 1.0499 | 0.064* | 0.50 |
| H34B | 0.4780 | 1.4107 | 1.0460 | 0.064* | 0.50 |
| H34C | 0.4867 | 1.5079 | 0.9341 | 0.064* | 0.50 |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| S1 | 0.0282 (8) | 0.0365 (10) | 0.0366 (9) | −0.0056 (9) | 0.0133 (7) | −0.0043 (9) |
| N1 | 0.025 (3) | 0.035 (4) | 0.035 (3) | −0.002 (3) | 0.013 (2) | −0.005 (3) |
| N2 | 0.020 (3) | 0.028 (3) | 0.029 (3) | 0.000 (3) | 0.012 (2) | −0.006 (3) |
| N3 | 0.024 (3) | 0.026 (3) | 0.029 (3) | −0.003 (3) | 0.012 (2) | −0.002 (3) |
| N4 | 0.026 (3) | 0.027 (3) | 0.035 (3) | 0.002 (3) | 0.013 (2) | −0.004 (3) |
| N5 | 0.024 (3) | 0.033 (4) | 0.036 (3) | 0.001 (3) | 0.012 (2) | −0.004 (3) |
| N6 | 0.023 (3) | 0.031 (3) | 0.029 (3) | 0.001 (3) | 0.012 (2) | 0.004 (3) |
| N7 | 0.025 (3) | 0.026 (3) | 0.031 (3) | 0.003 (3) | 0.013 (2) | 0.004 (3) |
| C1 | 0.023 (3) | 0.028 (4) | 0.030 (4) | 0.005 (3) | 0.014 (3) | 0.000 (3) |
| C2 | 0.029 (5) | 0.025 (5) | 0.032 (5) | 0.000 (4) | 0.009 (4) | −0.001 (5) |
| C3 | 0.030 (6) | 0.033 (6) | 0.043 (6) | 0.003 (5) | 0.006 (5) | −0.002 (6) |
| C4 | 0.026 (4) | 0.031 (8) | 0.036 (4) | 0.001 (5) | 0.005 (3) | −0.002 (5) |
| C5 | 0.030 (5) | 0.030 (6) | 0.047 (7) | 0.000 (5) | 0.019 (5) | 0.003 (6) |
| C6 | 0.032 (5) | 0.022 (5) | 0.039 (7) | −0.006 (4) | 0.017 (5) | −0.001 (5) |
| C1' | 0.023 (3) | 0.028 (4) | 0.030 (4) | 0.005 (3) | 0.014 (3) | 0.000 (3) |
| C2' | 0.029 (5) | 0.025 (5) | 0.032 (5) | 0.000 (4) | 0.009 (4) | −0.001 (5) |
| C3' | 0.030 (6) | 0.033 (6) | 0.043 (6) | 0.003 (5) | 0.006 (5) | −0.002 (6) |
| C4' | 0.026 (4) | 0.031 (8) | 0.036 (4) | 0.001 (5) | 0.005 (3) | −0.002 (5) |
| C5' | 0.030 (5) | 0.030 (6) | 0.047 (7) | 0.000 (5) | 0.019 (5) | 0.003 (6) |
| C6' | 0.032 (5) | 0.022 (5) | 0.039 (7) | −0.006 (4) | 0.017 (5) | −0.001 (5) |
| C7 | 0.024 (3) | 0.032 (4) | 0.030 (3) | −0.003 (3) | 0.019 (3) | 0.000 (3) |
| C8 | 0.016 (3) | 0.031 (4) | 0.030 (3) | 0.001 (3) | 0.010 (3) | 0.002 (3) |
| C9 | 0.016 (3) | 0.040 (5) | 0.030 (3) | −0.001 (3) | 0.008 (2) | −0.001 (3) |
| C10 | 0.023 (3) | 0.029 (4) | 0.024 (3) | 0.000 (3) | 0.012 (2) | −0.001 (3) |
| C11 | 0.026 (3) | 0.024 (4) | 0.027 (3) | 0.004 (3) | 0.011 (3) | 0.001 (3) |
| C12 | 0.022 (3) | 0.034 (4) | 0.024 (3) | −0.006 (3) | 0.009 (3) | 0.006 (3) |
| C13 | 0.024 (3) | 0.033 (4) | 0.038 (4) | −0.001 (3) | 0.014 (3) | −0.006 (4) |
| C14 | 0.021 (3) | 0.027 (4) | 0.039 (4) | −0.003 (3) | 0.014 (3) | −0.005 (3) |
| C15 | 0.028 (4) | 0.031 (4) | 0.044 (4) | 0.004 (3) | 0.019 (3) | 0.004 (4) |
| C16 | 0.037 (4) | 0.028 (4) | 0.048 (4) | 0.001 (4) | 0.023 (3) | 0.002 (4) |
| C17 | 0.048 (4) | 0.014 (4) | 0.057 (5) | −0.002 (3) | 0.032 (4) | −0.009 (3) |
| C18 | 0.045 (4) | 0.034 (4) | 0.035 (4) | −0.005 (4) | 0.020 (3) | −0.002 (4) |
| C19 | 0.037 (4) | 0.034 (4) | 0.034 (4) | 0.001 (4) | 0.012 (3) | −0.001 (4) |
| C20 | 0.065 (6) | 0.034 (5) | 0.058 (5) | 0.000 (5) | 0.044 (5) | −0.001 (5) |
| C21 | 0.020 (3) | 0.029 (4) | 0.032 (4) | −0.003 (3) | 0.007 (3) | 0.000 (3) |
| C22 | 0.036 (4) | 0.026 (4) | 0.050 (4) | 0.003 (4) | 0.025 (3) | −0.002 (4) |
| C23 | 0.031 (3) | 0.025 (4) | 0.041 (4) | 0.000 (3) | 0.019 (3) | 0.001 (3) |
| C24 | 0.019 (3) | 0.027 (4) | 0.033 (3) | 0.000 (3) | 0.012 (3) | 0.004 (3) |
| C25 | 0.029 (4) | 0.024 (4) | 0.040 (4) | 0.004 (3) | 0.019 (3) | −0.002 (3) |
| C26 | 0.029 (3) | 0.021 (4) | 0.040 (4) | 0.004 (3) | 0.018 (3) | 0.005 (3) |
| C27 | 0.031 (4) | 0.030 (4) | 0.038 (4) | −0.001 (3) | 0.017 (3) | 0.006 (4) |
| C28 | 0.026 (3) | 0.032 (4) | 0.033 (4) | 0.002 (3) | 0.014 (3) | 0.005 (3) |
| C29 | 0.029 (3) | 0.041 (5) | 0.032 (3) | 0.003 (3) | 0.011 (3) | 0.005 (4) |
| C30 | 0.027 (3) | 0.032 (4) | 0.037 (4) | 0.001 (3) | 0.015 (3) | 0.004 (4) |
| C31 | 0.030 (4) | 0.027 (4) | 0.043 (4) | −0.001 (3) | 0.020 (3) | 0.000 (3) |
| O1 | 0.046 (6) | 0.048 (7) | 0.059 (6) | 0.003 (6) | 0.017 (5) | −0.019 (6) |
| N8 | 0.038 (6) | 0.033 (6) | 0.050 (7) | −0.003 (6) | 0.017 (6) | −0.012 (5) |
| C32 | 0.038 (7) | 0.041 (8) | 0.043 (7) | −0.012 (6) | 0.010 (6) | −0.009 (6) |
| C33 | 0.048 (8) | 0.052 (9) | 0.056 (8) | 0.000 (7) | 0.019 (7) | −0.006 (7) |
| C34 | 0.045 (11) | 0.039 (7) | 0.055 (7) | 0.005 (6) | 0.032 (7) | −0.003 (8) |
Geometric parameters (Å, º)
| S1—C7 | 1.693 (8) | C13—H13C | 0.9800 |
| N1—C7 | 1.334 (10) | C14—C19 | 1.391 (10) |
| N1—C1 | 1.405 (8) | C14—C15 | 1.398 (11) |
| N1—C1' | 1.411 (8) | C15—C16 | 1.359 (11) |
| N1—H1 | 0.8800 | C15—H15 | 0.9500 |
| N2—C7 | 1.354 (9) | C16—C17 | 1.414 (11) |
| N2—N3 | 1.417 (8) | C16—H16 | 0.9500 |
| N2—C8 | 1.487 (8) | C17—C18 | 1.412 (12) |
| N3—C10 | 1.282 (8) | C17—C20 | 1.482 (11) |
| N4—N5 | 1.318 (9) | C18—C19 | 1.378 (11) |
| N4—C11 | 1.368 (9) | C18—H18 | 0.9500 |
| N5—N6 | 1.369 (8) | C19—H19 | 0.9500 |
| N6—C12 | 1.359 (9) | C20—H20A | 0.9800 |
| N6—C14 | 1.416 (10) | C20—H20B | 0.9800 |
| N7—C24 | 1.411 (8) | C20—H20C | 0.9800 |
| N7—C31 | 1.458 (10) | C21—C26 | 1.382 (10) |
| N7—C27 | 1.458 (10) | C21—C22 | 1.389 (12) |
| C1—C2 | 1.3900 | C22—C23 | 1.378 (10) |
| C1—C6 | 1.3900 | C22—H22 | 0.9500 |
| C2—C3 | 1.3900 | C23—C24 | 1.406 (10) |
| C2—H2 | 0.9500 | C23—H23 | 0.9500 |
| C3—C4 | 1.3900 | C24—C25 | 1.393 (11) |
| C3—H3 | 0.9500 | C25—C26 | 1.392 (9) |
| C4—C5 | 1.3900 | C25—H25 | 0.9500 |
| C4—H4 | 0.9500 | C26—H26 | 0.9500 |
| C5—C6 | 1.3900 | C27—C28 | 1.518 (9) |
| C5—H5 | 0.9500 | C27—H27A | 0.9900 |
| C6—H6 | 0.9500 | C27—H27B | 0.9900 |
| C1'—C2' | 1.3900 | C28—C29 | 1.522 (11) |
| C1'—C6' | 1.3900 | C28—H28A | 0.9900 |
| C2'—C3' | 1.3900 | C28—H28B | 0.9900 |
| C2'—H2' | 0.9500 | C29—C30 | 1.498 (11) |
| C3'—C4' | 1.3900 | C29—H29A | 0.9900 |
| C3'—H3' | 0.9500 | C29—H29B | 0.9900 |
| C4'—C5' | 1.3900 | C30—C31 | 1.534 (9) |
| C4'—H4' | 0.9500 | C30—H30A | 0.9900 |
| C5'—C6' | 1.3900 | C30—H30B | 0.9900 |
| C5'—H5' | 0.9500 | C31—H31A | 0.9900 |
| C6'—H6' | 0.9500 | C31—H31B | 0.9900 |
| C8—C21 | 1.509 (9) | O1—C32 | 1.242 (9) |
| C8—C9 | 1.550 (10) | N8—C32 | 1.338 (8) |
| C8—H8 | 1.0000 | N8—C33 | 1.442 (9) |
| C9—C10 | 1.495 (10) | N8—C34 | 1.456 (9) |
| C9—H9A | 0.9900 | C32—H32 | 0.9500 |
| C9—H9B | 0.9900 | C33—H33A | 0.9800 |
| C10—C11 | 1.467 (10) | C33—H33B | 0.9800 |
| C11—C12 | 1.363 (10) | C33—H33C | 0.9800 |
| C12—C13 | 1.503 (9) | C34—H34A | 0.9800 |
| C13—H13A | 0.9800 | C34—H34B | 0.9800 |
| C13—H13B | 0.9800 | C34—H34C | 0.9800 |
| C7—N1—C1 | 130.3 (8) | C12—C13—H13C | 109.5 |
| C7—N1—C1' | 132.0 (8) | H13A—C13—H13C | 109.5 |
| C1—N1—C1' | 5.1 (9) | H13B—C13—H13C | 109.5 |
| C7—N1—H1 | 114.9 | C19—C14—C15 | 120.6 (7) |
| C1—N1—H1 | 114.9 | C19—C14—N6 | 118.5 (7) |
| C1'—N1—H1 | 112.9 | C15—C14—N6 | 120.8 (7) |
| C7—N2—N3 | 118.5 (6) | C16—C15—C14 | 119.1 (7) |
| C7—N2—C8 | 127.8 (6) | C16—C15—H15 | 120.5 |
| N3—N2—C8 | 112.6 (5) | C14—C15—H15 | 120.5 |
| C10—N3—N2 | 106.5 (6) | C15—C16—C17 | 123.0 (8) |
| N5—N4—C11 | 108.2 (6) | C15—C16—H16 | 118.5 |
| N4—N5—N6 | 106.9 (6) | C17—C16—H16 | 118.5 |
| C12—N6—N5 | 111.0 (6) | C18—C17—C16 | 116.0 (7) |
| C12—N6—C14 | 130.6 (6) | C18—C17—C20 | 121.5 (8) |
| N5—N6—C14 | 118.1 (6) | C16—C17—C20 | 122.5 (8) |
| C24—N7—C31 | 116.9 (6) | C19—C18—C17 | 122.1 (7) |
| C24—N7—C27 | 116.2 (6) | C19—C18—H18 | 119.0 |
| C31—N7—C27 | 113.2 (6) | C17—C18—H18 | 119.0 |
| C2—C1—C6 | 120.0 | C18—C19—C14 | 119.2 (8) |
| C2—C1—N1 | 128.9 (7) | C18—C19—H19 | 120.4 |
| C6—C1—N1 | 111.0 (7) | C14—C19—H19 | 120.4 |
| C1—C2—C3 | 120.0 | C17—C20—H20A | 109.5 |
| C1—C2—H2 | 120.0 | C17—C20—H20B | 109.5 |
| C3—C2—H2 | 120.0 | H20A—C20—H20B | 109.5 |
| C4—C3—C2 | 120.0 | C17—C20—H20C | 109.5 |
| C4—C3—H3 | 120.0 | H20A—C20—H20C | 109.5 |
| C2—C3—H3 | 120.0 | H20B—C20—H20C | 109.5 |
| C5—C4—C3 | 120.0 | C26—C21—C22 | 117.1 (6) |
| C5—C4—H4 | 120.0 | C26—C21—C8 | 119.9 (7) |
| C3—C4—H4 | 120.0 | C22—C21—C8 | 122.9 (7) |
| C4—C5—C6 | 120.0 | C23—C22—C21 | 122.3 (8) |
| C4—C5—H5 | 120.0 | C23—C22—H22 | 118.8 |
| C6—C5—H5 | 120.0 | C21—C22—H22 | 118.8 |
| C5—C6—C1 | 120.0 | C22—C23—C24 | 120.8 (8) |
| C5—C6—H6 | 120.0 | C22—C23—H23 | 119.6 |
| C1—C6—H6 | 120.0 | C24—C23—H23 | 119.6 |
| C2'—C1'—C6' | 120.0 | C25—C24—C23 | 116.7 (6) |
| C2'—C1'—N1 | 120.5 (7) | C25—C24—N7 | 121.0 (6) |
| C6'—C1'—N1 | 119.5 (7) | C23—C24—N7 | 122.2 (7) |
| C3'—C2'—C1' | 120.0 | C24—C25—C26 | 121.6 (7) |
| C3'—C2'—H2' | 120.0 | C24—C25—H25 | 119.2 |
| C1'—C2'—H2' | 120.0 | C26—C25—H25 | 119.2 |
| C4'—C3'—C2' | 120.0 | C21—C26—C25 | 121.3 (7) |
| C4'—C3'—H3' | 120.0 | C21—C26—H26 | 119.3 |
| C2'—C3'—H3' | 120.0 | C25—C26—H26 | 119.3 |
| C5'—C4'—C3' | 120.0 | N7—C27—C28 | 112.2 (6) |
| C5'—C4'—H4' | 120.0 | N7—C27—H27A | 109.2 |
| C3'—C4'—H4' | 120.0 | C28—C27—H27A | 109.2 |
| C4'—C5'—C6' | 120.0 | N7—C27—H27B | 109.2 |
| C4'—C5'—H5' | 120.0 | C28—C27—H27B | 109.2 |
| C6'—C5'—H5' | 120.0 | H27A—C27—H27B | 107.9 |
| C5'—C6'—C1' | 120.0 | C27—C28—C29 | 110.5 (7) |
| C5'—C6'—H6' | 120.0 | C27—C28—H28A | 109.5 |
| C1'—C6'—H6' | 120.0 | C29—C28—H28A | 109.5 |
| N2—C7—N1 | 115.0 (7) | C27—C28—H28B | 109.5 |
| N2—C7—S1 | 118.8 (6) | C29—C28—H28B | 109.5 |
| N1—C7—S1 | 126.2 (6) | H28A—C28—H28B | 108.1 |
| N2—C8—C21 | 112.1 (6) | C30—C29—C28 | 108.0 (6) |
| N2—C8—C9 | 100.2 (5) | C30—C29—H29A | 110.1 |
| C21—C8—C9 | 112.9 (6) | C28—C29—H29A | 110.1 |
| N2—C8—H8 | 110.4 | C30—C29—H29B | 110.1 |
| C21—C8—H8 | 110.4 | C28—C29—H29B | 110.1 |
| C9—C8—H8 | 110.4 | H29A—C29—H29B | 108.4 |
| C10—C9—C8 | 102.3 (5) | C29—C30—C31 | 112.2 (6) |
| C10—C9—H9A | 111.3 | C29—C30—H30A | 109.2 |
| C8—C9—H9A | 111.3 | C31—C30—H30A | 109.2 |
| C10—C9—H9B | 111.3 | C29—C30—H30B | 109.2 |
| C8—C9—H9B | 111.3 | C31—C30—H30B | 109.2 |
| H9A—C9—H9B | 109.2 | H30A—C30—H30B | 107.9 |
| N3—C10—C11 | 120.4 (6) | N7—C31—C30 | 112.6 (7) |
| N3—C10—C9 | 115.6 (6) | N7—C31—H31A | 109.1 |
| C11—C10—C9 | 123.8 (6) | C30—C31—H31A | 109.1 |
| C12—C11—N4 | 110.1 (6) | N7—C31—H31B | 109.1 |
| C12—C11—C10 | 130.3 (6) | C30—C31—H31B | 109.1 |
| N4—C11—C10 | 119.3 (6) | H31A—C31—H31B | 107.8 |
| N6—C12—C11 | 103.9 (6) | C32—N8—C33 | 122.9 (9) |
| N6—C12—C13 | 124.6 (7) | C32—N8—C34 | 120.7 (10) |
| C11—C12—C13 | 131.6 (7) | C33—N8—C34 | 116.4 (12) |
| C12—C13—H13A | 109.5 | O1—C32—N8 | 123.0 (10) |
| C12—C13—H13B | 109.5 | O1—C32—H32 | 118.5 |
| H13A—C13—H13B | 109.5 | N8—C32—H32 | 118.5 |
| C7—N2—N3—C10 | 179.4 (6) | C9—C10—C11—N4 | 8.2 (10) |
| C8—N2—N3—C10 | −11.2 (7) | N5—N6—C12—C11 | 0.3 (8) |
| C11—N4—N5—N6 | 0.6 (8) | C14—N6—C12—C11 | −173.0 (8) |
| N4—N5—N6—C12 | −0.6 (8) | N5—N6—C12—C13 | 178.3 (7) |
| N4—N5—N6—C14 | 173.7 (6) | C14—N6—C12—C13 | 5.0 (12) |
| C7—N1—C1—C2 | 2.2 (15) | N4—C11—C12—N6 | 0.1 (8) |
| C1'—N1—C1—C2 | −110 (7) | C10—C11—C12—N6 | 173.6 (7) |
| C7—N1—C1—C6 | 179.2 (7) | N4—C11—C12—C13 | −177.7 (7) |
| C1'—N1—C1—C6 | 67 (7) | C10—C11—C12—C13 | −4.2 (13) |
| C6—C1—C2—C3 | 0.0 | C12—N6—C14—C19 | 125.9 (8) |
| N1—C1—C2—C3 | 176.8 (13) | N5—N6—C14—C19 | −47.1 (10) |
| C1—C2—C3—C4 | 0.0 | C12—N6—C14—C15 | −53.4 (11) |
| C2—C3—C4—C5 | 0.0 | N5—N6—C14—C15 | 133.7 (7) |
| C3—C4—C5—C6 | 0.0 | C19—C14—C15—C16 | −0.5 (11) |
| C4—C5—C6—C1 | 0.0 | N6—C14—C15—C16 | 178.7 (7) |
| C2—C1—C6—C5 | 0.0 | C14—C15—C16—C17 | 1.8 (12) |
| N1—C1—C6—C5 | −177.4 (11) | C15—C16—C17—C18 | −2.1 (12) |
| C7—N1—C1'—C2' | 41.5 (13) | C15—C16—C17—C20 | 179.8 (8) |
| C1—N1—C1'—C2' | 114 (7) | C16—C17—C18—C19 | 1.1 (12) |
| C7—N1—C1'—C6' | −138.2 (8) | C20—C17—C18—C19 | 179.2 (8) |
| C1—N1—C1'—C6' | −66 (7) | C17—C18—C19—C14 | 0.1 (12) |
| C6'—C1'—C2'—C3' | 0.0 | C15—C14—C19—C18 | −0.5 (11) |
| N1—C1'—C2'—C3' | −179.8 (11) | N6—C14—C19—C18 | −179.7 (7) |
| C1'—C2'—C3'—C4' | 0.0 | N2—C8—C21—C26 | −139.9 (7) |
| C2'—C3'—C4'—C5' | 0.0 | C9—C8—C21—C26 | 107.8 (8) |
| C3'—C4'—C5'—C6' | 0.0 | N2—C8—C21—C22 | 42.8 (10) |
| C4'—C5'—C6'—C1' | 0.0 | C9—C8—C21—C22 | −69.5 (9) |
| C2'—C1'—C6'—C5' | 0.0 | C26—C21—C22—C23 | 1.3 (12) |
| N1—C1'—C6'—C5' | 179.8 (11) | C8—C21—C22—C23 | 178.7 (7) |
| N3—N2—C7—N1 | 5.7 (9) | C21—C22—C23—C24 | −0.4 (12) |
| C8—N2—C7—N1 | −161.8 (6) | C22—C23—C24—C25 | −1.2 (11) |
| N3—N2—C7—S1 | −173.2 (4) | C22—C23—C24—N7 | −179.6 (7) |
| C8—N2—C7—S1 | 19.2 (9) | C31—N7—C24—C25 | 24.7 (10) |
| C1—N1—C7—N2 | −176.3 (9) | C27—N7—C24—C25 | 162.7 (7) |
| C1'—N1—C7—N2 | −169.9 (9) | C31—N7—C24—C23 | −156.9 (7) |
| C1—N1—C7—S1 | 2.6 (12) | C27—N7—C24—C23 | −18.9 (10) |
| C1'—N1—C7—S1 | 8.9 (12) | C23—C24—C25—C26 | 1.8 (11) |
| C7—N2—C8—C21 | 64.7 (10) | N7—C24—C25—C26 | −179.7 (7) |
| N3—N2—C8—C21 | −103.4 (7) | C22—C21—C26—C25 | −0.7 (11) |
| C7—N2—C8—C9 | −175.3 (7) | C8—C21—C26—C25 | −178.2 (7) |
| N3—N2—C8—C9 | 16.5 (7) | C24—C25—C26—C21 | −0.9 (12) |
| N2—C8—C9—C10 | −14.7 (7) | C24—N7—C27—C28 | 167.4 (6) |
| C21—C8—C9—C10 | 104.7 (7) | C31—N7—C27—C28 | −53.1 (8) |
| N2—N3—C10—C11 | −174.5 (6) | N7—C27—C28—C29 | 57.4 (8) |
| N2—N3—C10—C9 | 0.0 (8) | C27—C28—C29—C30 | −58.0 (8) |
| C8—C9—C10—N3 | 10.2 (8) | C28—C29—C30—C31 | 55.9 (9) |
| C8—C9—C10—C11 | −175.6 (6) | C24—N7—C31—C30 | −170.6 (6) |
| N5—N4—C11—C12 | −0.5 (8) | C27—N7—C31—C30 | 50.2 (8) |
| N5—N4—C11—C10 | −174.8 (6) | C29—C30—C31—N7 | −52.8 (9) |
| N3—C10—C11—C12 | 9.2 (11) | C33—N8—C32—O1 | −0.1 (4) |
| C9—C10—C11—C12 | −164.8 (7) | C34—N8—C32—O1 | −179.8 (3) |
| N3—C10—C11—N4 | −177.8 (7) |
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1···N3 | 0.88 | 2.13 | 2.597 (8) | 112 |
| C13—H13A···O1 | 0.98 | 2.56 | 3.466 (14) | 154 |
| C28—H28B···N5i | 0.99 | 2.57 | 3.355 (10) | 137 |
Symmetry code: (i) x, y, z−1.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: XU5554).
References
- Abdel-Wahab, B. F., Abdel-Aziz, H. A. & Ahmed, E. M. (2009). Eur. J. Med. Chem. 44, 2632–2635. [DOI] [PubMed]
- Abdel-Wahab, B. F., Abdel-Latif, E., Mohamed, H. A. & Awad, G. E. A. (2012a). Eur. J. Med. Chem. 52, 263–268. [DOI] [PubMed]
- Abdel-Wahab, B. F., Abdel-Latif, E., Ng, S. W. & Tiekink, E. R. T. (2012b). Acta Cryst. E68, o1954-o1955. [DOI] [PMC free article] [PubMed]
- Agilent (2012). CrysAlis PRO Agilent Technologies, Yarnton, England.
- Brandenburg, K. (2006). DIAMOND Crystal Impact GbR, Bonn, Germany.
- Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812024488/xu5554sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812024488/xu5554Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812024488/xu5554Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


