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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Jun 2;68(Pt 7):o1985. doi: 10.1107/S1600536812024488

3-[5-Methyl-1-(4-methyl­phen­yl)-1H-1,2,3-triazol-4-yl]-N-phenyl-5-[4-(piperidin-1-yl)phen­yl]-4,5-dihydro-1H-pyrazole-1-carbothio­amide dimethyl­formamide hemisolvate

Bakr F Abdel-Wahab a,, Hanan A Mohamed a, Seik Weng Ng b,c, Edward R T Tiekink b,*
PMCID: PMC3393261  PMID: 22807818

Abstract

The essentially planar pyrazole ring (r.m.s. deviation = 0.013 Å) in the title hemisolvate, C31H33N7S·0.5C3H7NO, is almost coplanar with the pendant thio­urea residue [N—N—C—S torsion angle = −173.2 (4)°] and slightly twisted with respect to the triazole ring [dihedral angle = 7.7 (3)°]. An intra­molecular thio­urea–pyrazole N—H⋯N hydrogen bond, via an S(5) loop, is formed. Supra­molecular chains along the c axis are formed in the crystal via piperidine–triazole C—H⋯N inter­actions. These are bridged into loosely associated double chains via C—H⋯O inter­actions involving the disordered (over two positions) dimethyl­formamide solvent mol­ecules. The thio­urea-bound phenyl ring is also disordered over two positions of equal occupancy.

Related literature  

For the biological activity of related compounds, see: Abdel-Wahab et al. (2009, 2012a ). For a related pyrazolyl-1,2,3-triazole structure, see: Abdel-Wahab et al. (2012b ).graphic file with name e-68-o1985-scheme1.jpg

Experimental  

Crystal data  

  • C31H33N7S·0.5C3H7NO

  • M r = 522.26

  • Monoclinic, Inline graphic

  • a = 42.077 (4) Å

  • b = 5.9274 (5) Å

  • c = 12.0737 (11) Å

  • β = 105.665 (9)°

  • V = 2899.5 (4) Å3

  • Z = 4

  • Cu Kα radiation

  • μ = 1.29 mm−1

  • T = 100 K

  • 0.35 × 0.15 × 0.05 mm

Data collection  

  • Agilent SuperNova Dual diffractometer with an Atlas detector

  • Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012) T min = 0.661, T max = 0.938

  • 10437 measured reflections

  • 3317 independent reflections

  • 3229 reflections with I > 2σ(I)

  • R int = 0.037

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.091

  • wR(F 2) = 0.214

  • S = 1.11

  • 3317 reflections

  • 396 parameters

  • 41 restraints

  • H-atom parameters constrained

  • Δρmax = 0.71 e Å−3

  • Δρmin = −1.06 e Å−3

Data collection: CrysAlis PRO (Agilent, 2012); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812024488/xu5554sup1.cif

e-68-o1985-sup1.cif (30.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812024488/xu5554Isup2.hkl

e-68-o1985-Isup2.hkl (162.7KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812024488/xu5554Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1⋯N3 0.88 2.13 2.597 (8) 112
C13—H13A⋯O1 0.98 2.56 3.466 (14) 154
C28—H28B⋯N5i 0.99 2.57 3.355 (10) 137

Symmetry code: (i) Inline graphic.

Acknowledgments

We thank the Ministry of Higher Education (Malaysia) for funding structural studies through the High-Impact Research scheme (UM.C/HIR/MOHE/SC/12).

supplementary crystallographic information

Comment

The synthesis and crystallographic characterization of the title compound was motivated by the established biological activities exhibited by related 3-(benzofuran-2-yl)-4,5-dihydro-5-phenyl-1-(4-phenylthiazol-2-yl)-1H-pyrazole and 1,2,3-triazol-4-yl-pyrazolylthiazoles (Abdel-Wahab et al. 2012a; Abdel-Wahab et al. 2009) and accompanying structural studies (Abdel-Wahab et al., 2012b).

In (I), Fig. 1, the pyrazole ring is planar with a r.m.s. deviation = 0.013 Å; the maximum deviation is 0.005 (6) Å for the N2 atom. The thiourea group is close to co-planar with the ring [the N3—N2—C7—S1 torsion angle = -173.2 (4)°] and the connected triazole ring is slightly twisted out of the plane [dihedral angle = 7.7 (3)°]. There is a significant twist between the triazole and attached benzene rings with the dihedral angle being 49.4 (3)°. The conformation of the piperidinyl ring is close to a chair. The thiourea-N—H atom is orientated towards the pyrazole-N3 atom and forms a hydrogen bond via an S(5) loop, Table 1.

In the crystal packing, connections between molecules are of the type piperidinyl-C—H···N(triazole), Table 1, leading to the formation of a supramolecular chain along the c axis. Two chains are connected by the (disordered) dimethylformamide molecules via methyl-C13—H···O1 interactions into a loosely associated double chain, Fig. 2 and Table 1.

Experimental

The title compound was prepared according to the reported method (Abdel-Wahab et al., 2012a). Crystals were obtained from its DMF solution by slow evaporation at room temperature.

Refinement

The H-atoms were placed in calculated positions [N—H = 0.88 Å; C—H = 0.95 to 0.98 Å, Uiso(H) = 1.2–1.5Ueq(N,C)] and were included in the refinement in the riding model approximation.

The phenyl ring is disordered over two positions in an assumed 1:1 ratio; the ring was refined as a rigid hexagon with 1.39 Å sides. The displacement factors of the primed atoms were set to those of the unprimed ones.

The DMF molecule is disordered over a twofold rotation axis. The C—O distance was restrained to 1.25±0.01 Å and the N–Ccarbonyl distance to 1.35±0.01 Å; the other two N–C distances were restrained to 1.45±0.01 Å. Additionally, the 1,3-related distances were also restrained. The anisotropic displacement parameters were tightly restrained to be nearly isotropic.

The absolute structure could not be refined despite the presence of a sulfur atom as the crystal is a racemic twin; 1153 Friedel pairs were merged.

The maximum and minimum residual electron density peaks of 0.71 and 1.06 e Å-3, respectively, were located 0.71 Å and 0.82 Å, respectively, from the S1 atom.

A reflection, i.e. (-3 1 3), was omitted owing to poor agreement.

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I) showing the atom-labelling scheme and displacement ellipsoids at the 50% probability level.

Fig. 2.

Fig. 2.

A view of a supramolecular chain along the c axis in (I). The dimethylformamide molecule is disordered over two positions. The C—H···O and C—H···N interactions are shown as orange and blue dashed lines, respectively.

Crystal data

C31H33N7S·0.5C3H7NO F(000) = 1216
Mr = 522.26 Dx = 1.311 Mg m3
Monoclinic, C2 Cu Kα radiation, λ = 1.54184 Å
Hall symbol: C 2y Cell parameters from 6358 reflections
a = 42.077 (4) Å θ = 3.8–76.9°
b = 5.9274 (5) Å µ = 1.29 mm1
c = 12.0737 (11) Å T = 100 K
β = 105.665 (9)° Prism, light-brown
V = 2899.5 (4) Å3 0.35 × 0.15 × 0.05 mm
Z = 4

Data collection

Agilent SuperNova Dual diffractometer with an Atlas detector 3317 independent reflections
Radiation source: SuperNova (Cu) X-ray Source 3229 reflections with I > 2σ(I)
Mirror monochromator Rint = 0.037
Detector resolution: 10.4041 pixels mm-1 θmax = 77.1°, θmin = 3.8°
ω scan h = −52→49
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012) k = −5→7
Tmin = 0.661, Tmax = 0.938 l = −14→15
10437 measured reflections

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.091 H-atom parameters constrained
wR(F2) = 0.214 w = 1/[σ2(Fo2) + (0.0422P)2 + 29.4613P] where P = (Fo2 + 2Fc2)/3
S = 1.11 (Δ/σ)max = 0.001
3317 reflections Δρmax = 0.71 e Å3
396 parameters Δρmin = −1.06 e Å3
41 restraints Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.00150 (17)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq Occ. (<1)
S1 0.59659 (4) 0.0014 (4) 0.47105 (16) 0.0329 (5)
N1 0.56945 (14) 0.4011 (13) 0.5037 (5) 0.0306 (14)
H1 0.5726 0.5285 0.5426 0.037*
N2 0.61985 (13) 0.3203 (11) 0.6223 (5) 0.0250 (13)
N3 0.61644 (13) 0.5210 (12) 0.6819 (5) 0.0251 (12)
N4 0.67600 (14) 0.7524 (12) 0.9292 (5) 0.0282 (13)
N5 0.67224 (14) 0.9126 (13) 1.0004 (5) 0.0304 (14)
N6 0.64025 (13) 0.9852 (13) 0.9628 (5) 0.0267 (13)
N7 0.72517 (13) 0.4072 (12) 0.3176 (5) 0.0261 (13)
C1 0.53887 (17) 0.3838 (17) 0.4206 (10) 0.0259 (16) 0.50
C2 0.5261 (2) 0.2040 (15) 0.3484 (10) 0.029 (2) 0.50
H2 0.5391 0.0727 0.3489 0.035* 0.50
C3 0.4944 (2) 0.2165 (17) 0.2753 (9) 0.036 (3) 0.50
H3 0.4856 0.0936 0.2259 0.043* 0.50
C4 0.47537 (19) 0.409 (2) 0.2745 (10) 0.032 (3) 0.50
H4 0.4537 0.4172 0.2245 0.038* 0.50
C5 0.4881 (2) 0.5885 (16) 0.3467 (10) 0.034 (3) 0.50
H5 0.4752 0.7199 0.3462 0.041* 0.50
C6 0.5199 (2) 0.5761 (14) 0.4198 (9) 0.029 (2) 0.50
H6 0.5286 0.6989 0.4692 0.035* 0.50
C1' 0.53743 (17) 0.3832 (17) 0.4284 (9) 0.0259 (16) 0.50
C2' 0.5190 (2) 0.1876 (15) 0.4256 (9) 0.029 (2) 0.50
H2' 0.5279 0.0650 0.4749 0.035* 0.50
C3' 0.4875 (2) 0.1716 (15) 0.3507 (10) 0.036 (3) 0.50
H3' 0.4749 0.0380 0.3489 0.043* 0.50
C4' 0.4745 (2) 0.3511 (19) 0.2787 (10) 0.032 (3) 0.50
H4' 0.4530 0.3401 0.2275 0.038* 0.50
C5' 0.4929 (2) 0.5466 (16) 0.2814 (9) 0.034 (3) 0.50
H5' 0.4840 0.6693 0.2322 0.041* 0.50
C6' 0.5244 (2) 0.5627 (14) 0.3563 (10) 0.029 (2) 0.50
H6' 0.5370 0.6963 0.3582 0.035* 0.50
C7 0.59446 (16) 0.2551 (14) 0.5330 (6) 0.0261 (15)
C8 0.65420 (15) 0.2319 (14) 0.6552 (6) 0.0252 (15)
H8 0.6543 0.0662 0.6708 0.030*
C9 0.66858 (15) 0.3640 (15) 0.7684 (6) 0.0281 (16)
H9A 0.6707 0.2663 0.8366 0.034*
H9B 0.6904 0.4294 0.7710 0.034*
C10 0.64330 (16) 0.5443 (13) 0.7621 (5) 0.0240 (15)
C11 0.64669 (17) 0.7263 (13) 0.8469 (6) 0.0246 (14)
C12 0.62375 (16) 0.8719 (14) 0.8666 (6) 0.0263 (15)
C13 0.58794 (16) 0.9065 (15) 0.8053 (6) 0.0305 (16)
H13A 0.5758 0.9465 0.8612 0.046*
H13B 0.5788 0.7670 0.7656 0.046*
H13C 0.5858 1.0285 0.7490 0.046*
C14 0.62887 (16) 1.1423 (14) 1.0318 (6) 0.0276 (16)
C15 0.61095 (18) 1.3329 (15) 0.9829 (7) 0.0327 (17)
H15 0.6065 1.3611 0.9027 0.039*
C16 0.59990 (19) 1.4774 (16) 1.0516 (7) 0.0354 (17)
H16 0.5872 1.6041 1.0173 0.043*
C17 0.6065 (2) 1.4476 (13) 1.1719 (8) 0.0363 (19)
C18 0.6245 (2) 1.2523 (16) 1.2175 (7) 0.0360 (18)
H18 0.6292 1.2239 1.2977 0.043*
C19 0.63557 (19) 1.1015 (16) 1.1493 (6) 0.0343 (17)
H19 0.6476 0.9712 1.1822 0.041*
C20 0.5944 (2) 1.6067 (17) 1.2460 (8) 0.047 (2)
H20A 0.5827 1.5227 1.2929 0.071*
H20B 0.5793 1.7156 1.1977 0.071*
H20C 0.6131 1.6871 1.2964 0.071*
C21 0.67202 (16) 0.2810 (14) 0.5649 (6) 0.0269 (16)
C22 0.67004 (19) 0.4876 (16) 0.5091 (7) 0.0350 (17)
H22 0.6565 0.6026 0.5273 0.042*
C23 0.68695 (17) 0.5317 (14) 0.4285 (6) 0.0305 (16)
H23 0.6848 0.6751 0.3921 0.037*
C24 0.70737 (16) 0.3670 (14) 0.3994 (6) 0.0258 (15)
C25 0.70995 (18) 0.1619 (14) 0.4574 (6) 0.0291 (16)
H25 0.7240 0.0480 0.4417 0.035*
C26 0.69243 (17) 0.1197 (13) 0.5380 (6) 0.0280 (15)
H26 0.6946 −0.0229 0.5751 0.034*
C27 0.71379 (18) 0.5951 (15) 0.2389 (7) 0.0318 (17)
H27A 0.7099 0.7279 0.2832 0.038*
H27B 0.6925 0.5540 0.1838 0.038*
C28 0.73850 (18) 0.6574 (14) 0.1727 (6) 0.0293 (16)
H28A 0.7592 0.7105 0.2270 0.035*
H28B 0.7295 0.7818 0.1187 0.035*
C29 0.74577 (18) 0.4548 (15) 0.1060 (6) 0.0333 (19)
H29A 0.7254 0.4055 0.0486 0.040*
H29B 0.7624 0.4954 0.0650 0.040*
C30 0.75863 (18) 0.2688 (15) 0.1902 (6) 0.0307 (17)
H30A 0.7801 0.3149 0.2423 0.037*
H30B 0.7624 0.1328 0.1479 0.037*
C31 0.73474 (18) 0.2102 (14) 0.2620 (7) 0.0313 (17)
H31A 0.7147 0.1397 0.2115 0.038*
H31B 0.7453 0.0985 0.3215 0.038*
O1 0.5327 (3) 0.8817 (18) 0.9722 (10) 0.051 (3) 0.50
N8 0.4987 (3) 1.1815 (15) 0.9647 (8) 0.039 (4) 0.50
C32 0.5278 (3) 1.0766 (18) 1.0017 (9) 0.041 (4) 0.50
H32 0.5455 1.1547 1.0528 0.049* 0.50
C33 0.4703 (3) 1.078 (3) 0.8870 (13) 0.051 (5) 0.50
H33A 0.4768 0.9346 0.8593 0.077* 0.50
H33B 0.4615 1.1789 0.8215 0.077* 0.50
H33C 0.4534 1.0509 0.9274 0.077* 0.50
C34 0.4944 (4) 1.4106 (18) 1.002 (2) 0.043 (5) 0.50
H34A 0.5155 1.4673 1.0499 0.064* 0.50
H34B 0.4780 1.4107 1.0460 0.064* 0.50
H34C 0.4867 1.5079 0.9341 0.064* 0.50

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.0282 (8) 0.0365 (10) 0.0366 (9) −0.0056 (9) 0.0133 (7) −0.0043 (9)
N1 0.025 (3) 0.035 (4) 0.035 (3) −0.002 (3) 0.013 (2) −0.005 (3)
N2 0.020 (3) 0.028 (3) 0.029 (3) 0.000 (3) 0.012 (2) −0.006 (3)
N3 0.024 (3) 0.026 (3) 0.029 (3) −0.003 (3) 0.012 (2) −0.002 (3)
N4 0.026 (3) 0.027 (3) 0.035 (3) 0.002 (3) 0.013 (2) −0.004 (3)
N5 0.024 (3) 0.033 (4) 0.036 (3) 0.001 (3) 0.012 (2) −0.004 (3)
N6 0.023 (3) 0.031 (3) 0.029 (3) 0.001 (3) 0.012 (2) 0.004 (3)
N7 0.025 (3) 0.026 (3) 0.031 (3) 0.003 (3) 0.013 (2) 0.004 (3)
C1 0.023 (3) 0.028 (4) 0.030 (4) 0.005 (3) 0.014 (3) 0.000 (3)
C2 0.029 (5) 0.025 (5) 0.032 (5) 0.000 (4) 0.009 (4) −0.001 (5)
C3 0.030 (6) 0.033 (6) 0.043 (6) 0.003 (5) 0.006 (5) −0.002 (6)
C4 0.026 (4) 0.031 (8) 0.036 (4) 0.001 (5) 0.005 (3) −0.002 (5)
C5 0.030 (5) 0.030 (6) 0.047 (7) 0.000 (5) 0.019 (5) 0.003 (6)
C6 0.032 (5) 0.022 (5) 0.039 (7) −0.006 (4) 0.017 (5) −0.001 (5)
C1' 0.023 (3) 0.028 (4) 0.030 (4) 0.005 (3) 0.014 (3) 0.000 (3)
C2' 0.029 (5) 0.025 (5) 0.032 (5) 0.000 (4) 0.009 (4) −0.001 (5)
C3' 0.030 (6) 0.033 (6) 0.043 (6) 0.003 (5) 0.006 (5) −0.002 (6)
C4' 0.026 (4) 0.031 (8) 0.036 (4) 0.001 (5) 0.005 (3) −0.002 (5)
C5' 0.030 (5) 0.030 (6) 0.047 (7) 0.000 (5) 0.019 (5) 0.003 (6)
C6' 0.032 (5) 0.022 (5) 0.039 (7) −0.006 (4) 0.017 (5) −0.001 (5)
C7 0.024 (3) 0.032 (4) 0.030 (3) −0.003 (3) 0.019 (3) 0.000 (3)
C8 0.016 (3) 0.031 (4) 0.030 (3) 0.001 (3) 0.010 (3) 0.002 (3)
C9 0.016 (3) 0.040 (5) 0.030 (3) −0.001 (3) 0.008 (2) −0.001 (3)
C10 0.023 (3) 0.029 (4) 0.024 (3) 0.000 (3) 0.012 (2) −0.001 (3)
C11 0.026 (3) 0.024 (4) 0.027 (3) 0.004 (3) 0.011 (3) 0.001 (3)
C12 0.022 (3) 0.034 (4) 0.024 (3) −0.006 (3) 0.009 (3) 0.006 (3)
C13 0.024 (3) 0.033 (4) 0.038 (4) −0.001 (3) 0.014 (3) −0.006 (4)
C14 0.021 (3) 0.027 (4) 0.039 (4) −0.003 (3) 0.014 (3) −0.005 (3)
C15 0.028 (4) 0.031 (4) 0.044 (4) 0.004 (3) 0.019 (3) 0.004 (4)
C16 0.037 (4) 0.028 (4) 0.048 (4) 0.001 (4) 0.023 (3) 0.002 (4)
C17 0.048 (4) 0.014 (4) 0.057 (5) −0.002 (3) 0.032 (4) −0.009 (3)
C18 0.045 (4) 0.034 (4) 0.035 (4) −0.005 (4) 0.020 (3) −0.002 (4)
C19 0.037 (4) 0.034 (4) 0.034 (4) 0.001 (4) 0.012 (3) −0.001 (4)
C20 0.065 (6) 0.034 (5) 0.058 (5) 0.000 (5) 0.044 (5) −0.001 (5)
C21 0.020 (3) 0.029 (4) 0.032 (4) −0.003 (3) 0.007 (3) 0.000 (3)
C22 0.036 (4) 0.026 (4) 0.050 (4) 0.003 (4) 0.025 (3) −0.002 (4)
C23 0.031 (3) 0.025 (4) 0.041 (4) 0.000 (3) 0.019 (3) 0.001 (3)
C24 0.019 (3) 0.027 (4) 0.033 (3) 0.000 (3) 0.012 (3) 0.004 (3)
C25 0.029 (4) 0.024 (4) 0.040 (4) 0.004 (3) 0.019 (3) −0.002 (3)
C26 0.029 (3) 0.021 (4) 0.040 (4) 0.004 (3) 0.018 (3) 0.005 (3)
C27 0.031 (4) 0.030 (4) 0.038 (4) −0.001 (3) 0.017 (3) 0.006 (4)
C28 0.026 (3) 0.032 (4) 0.033 (4) 0.002 (3) 0.014 (3) 0.005 (3)
C29 0.029 (3) 0.041 (5) 0.032 (3) 0.003 (3) 0.011 (3) 0.005 (4)
C30 0.027 (3) 0.032 (4) 0.037 (4) 0.001 (3) 0.015 (3) 0.004 (4)
C31 0.030 (4) 0.027 (4) 0.043 (4) −0.001 (3) 0.020 (3) 0.000 (3)
O1 0.046 (6) 0.048 (7) 0.059 (6) 0.003 (6) 0.017 (5) −0.019 (6)
N8 0.038 (6) 0.033 (6) 0.050 (7) −0.003 (6) 0.017 (6) −0.012 (5)
C32 0.038 (7) 0.041 (8) 0.043 (7) −0.012 (6) 0.010 (6) −0.009 (6)
C33 0.048 (8) 0.052 (9) 0.056 (8) 0.000 (7) 0.019 (7) −0.006 (7)
C34 0.045 (11) 0.039 (7) 0.055 (7) 0.005 (6) 0.032 (7) −0.003 (8)

Geometric parameters (Å, º)

S1—C7 1.693 (8) C13—H13C 0.9800
N1—C7 1.334 (10) C14—C19 1.391 (10)
N1—C1 1.405 (8) C14—C15 1.398 (11)
N1—C1' 1.411 (8) C15—C16 1.359 (11)
N1—H1 0.8800 C15—H15 0.9500
N2—C7 1.354 (9) C16—C17 1.414 (11)
N2—N3 1.417 (8) C16—H16 0.9500
N2—C8 1.487 (8) C17—C18 1.412 (12)
N3—C10 1.282 (8) C17—C20 1.482 (11)
N4—N5 1.318 (9) C18—C19 1.378 (11)
N4—C11 1.368 (9) C18—H18 0.9500
N5—N6 1.369 (8) C19—H19 0.9500
N6—C12 1.359 (9) C20—H20A 0.9800
N6—C14 1.416 (10) C20—H20B 0.9800
N7—C24 1.411 (8) C20—H20C 0.9800
N7—C31 1.458 (10) C21—C26 1.382 (10)
N7—C27 1.458 (10) C21—C22 1.389 (12)
C1—C2 1.3900 C22—C23 1.378 (10)
C1—C6 1.3900 C22—H22 0.9500
C2—C3 1.3900 C23—C24 1.406 (10)
C2—H2 0.9500 C23—H23 0.9500
C3—C4 1.3900 C24—C25 1.393 (11)
C3—H3 0.9500 C25—C26 1.392 (9)
C4—C5 1.3900 C25—H25 0.9500
C4—H4 0.9500 C26—H26 0.9500
C5—C6 1.3900 C27—C28 1.518 (9)
C5—H5 0.9500 C27—H27A 0.9900
C6—H6 0.9500 C27—H27B 0.9900
C1'—C2' 1.3900 C28—C29 1.522 (11)
C1'—C6' 1.3900 C28—H28A 0.9900
C2'—C3' 1.3900 C28—H28B 0.9900
C2'—H2' 0.9500 C29—C30 1.498 (11)
C3'—C4' 1.3900 C29—H29A 0.9900
C3'—H3' 0.9500 C29—H29B 0.9900
C4'—C5' 1.3900 C30—C31 1.534 (9)
C4'—H4' 0.9500 C30—H30A 0.9900
C5'—C6' 1.3900 C30—H30B 0.9900
C5'—H5' 0.9500 C31—H31A 0.9900
C6'—H6' 0.9500 C31—H31B 0.9900
C8—C21 1.509 (9) O1—C32 1.242 (9)
C8—C9 1.550 (10) N8—C32 1.338 (8)
C8—H8 1.0000 N8—C33 1.442 (9)
C9—C10 1.495 (10) N8—C34 1.456 (9)
C9—H9A 0.9900 C32—H32 0.9500
C9—H9B 0.9900 C33—H33A 0.9800
C10—C11 1.467 (10) C33—H33B 0.9800
C11—C12 1.363 (10) C33—H33C 0.9800
C12—C13 1.503 (9) C34—H34A 0.9800
C13—H13A 0.9800 C34—H34B 0.9800
C13—H13B 0.9800 C34—H34C 0.9800
C7—N1—C1 130.3 (8) C12—C13—H13C 109.5
C7—N1—C1' 132.0 (8) H13A—C13—H13C 109.5
C1—N1—C1' 5.1 (9) H13B—C13—H13C 109.5
C7—N1—H1 114.9 C19—C14—C15 120.6 (7)
C1—N1—H1 114.9 C19—C14—N6 118.5 (7)
C1'—N1—H1 112.9 C15—C14—N6 120.8 (7)
C7—N2—N3 118.5 (6) C16—C15—C14 119.1 (7)
C7—N2—C8 127.8 (6) C16—C15—H15 120.5
N3—N2—C8 112.6 (5) C14—C15—H15 120.5
C10—N3—N2 106.5 (6) C15—C16—C17 123.0 (8)
N5—N4—C11 108.2 (6) C15—C16—H16 118.5
N4—N5—N6 106.9 (6) C17—C16—H16 118.5
C12—N6—N5 111.0 (6) C18—C17—C16 116.0 (7)
C12—N6—C14 130.6 (6) C18—C17—C20 121.5 (8)
N5—N6—C14 118.1 (6) C16—C17—C20 122.5 (8)
C24—N7—C31 116.9 (6) C19—C18—C17 122.1 (7)
C24—N7—C27 116.2 (6) C19—C18—H18 119.0
C31—N7—C27 113.2 (6) C17—C18—H18 119.0
C2—C1—C6 120.0 C18—C19—C14 119.2 (8)
C2—C1—N1 128.9 (7) C18—C19—H19 120.4
C6—C1—N1 111.0 (7) C14—C19—H19 120.4
C1—C2—C3 120.0 C17—C20—H20A 109.5
C1—C2—H2 120.0 C17—C20—H20B 109.5
C3—C2—H2 120.0 H20A—C20—H20B 109.5
C4—C3—C2 120.0 C17—C20—H20C 109.5
C4—C3—H3 120.0 H20A—C20—H20C 109.5
C2—C3—H3 120.0 H20B—C20—H20C 109.5
C5—C4—C3 120.0 C26—C21—C22 117.1 (6)
C5—C4—H4 120.0 C26—C21—C8 119.9 (7)
C3—C4—H4 120.0 C22—C21—C8 122.9 (7)
C4—C5—C6 120.0 C23—C22—C21 122.3 (8)
C4—C5—H5 120.0 C23—C22—H22 118.8
C6—C5—H5 120.0 C21—C22—H22 118.8
C5—C6—C1 120.0 C22—C23—C24 120.8 (8)
C5—C6—H6 120.0 C22—C23—H23 119.6
C1—C6—H6 120.0 C24—C23—H23 119.6
C2'—C1'—C6' 120.0 C25—C24—C23 116.7 (6)
C2'—C1'—N1 120.5 (7) C25—C24—N7 121.0 (6)
C6'—C1'—N1 119.5 (7) C23—C24—N7 122.2 (7)
C3'—C2'—C1' 120.0 C24—C25—C26 121.6 (7)
C3'—C2'—H2' 120.0 C24—C25—H25 119.2
C1'—C2'—H2' 120.0 C26—C25—H25 119.2
C4'—C3'—C2' 120.0 C21—C26—C25 121.3 (7)
C4'—C3'—H3' 120.0 C21—C26—H26 119.3
C2'—C3'—H3' 120.0 C25—C26—H26 119.3
C5'—C4'—C3' 120.0 N7—C27—C28 112.2 (6)
C5'—C4'—H4' 120.0 N7—C27—H27A 109.2
C3'—C4'—H4' 120.0 C28—C27—H27A 109.2
C4'—C5'—C6' 120.0 N7—C27—H27B 109.2
C4'—C5'—H5' 120.0 C28—C27—H27B 109.2
C6'—C5'—H5' 120.0 H27A—C27—H27B 107.9
C5'—C6'—C1' 120.0 C27—C28—C29 110.5 (7)
C5'—C6'—H6' 120.0 C27—C28—H28A 109.5
C1'—C6'—H6' 120.0 C29—C28—H28A 109.5
N2—C7—N1 115.0 (7) C27—C28—H28B 109.5
N2—C7—S1 118.8 (6) C29—C28—H28B 109.5
N1—C7—S1 126.2 (6) H28A—C28—H28B 108.1
N2—C8—C21 112.1 (6) C30—C29—C28 108.0 (6)
N2—C8—C9 100.2 (5) C30—C29—H29A 110.1
C21—C8—C9 112.9 (6) C28—C29—H29A 110.1
N2—C8—H8 110.4 C30—C29—H29B 110.1
C21—C8—H8 110.4 C28—C29—H29B 110.1
C9—C8—H8 110.4 H29A—C29—H29B 108.4
C10—C9—C8 102.3 (5) C29—C30—C31 112.2 (6)
C10—C9—H9A 111.3 C29—C30—H30A 109.2
C8—C9—H9A 111.3 C31—C30—H30A 109.2
C10—C9—H9B 111.3 C29—C30—H30B 109.2
C8—C9—H9B 111.3 C31—C30—H30B 109.2
H9A—C9—H9B 109.2 H30A—C30—H30B 107.9
N3—C10—C11 120.4 (6) N7—C31—C30 112.6 (7)
N3—C10—C9 115.6 (6) N7—C31—H31A 109.1
C11—C10—C9 123.8 (6) C30—C31—H31A 109.1
C12—C11—N4 110.1 (6) N7—C31—H31B 109.1
C12—C11—C10 130.3 (6) C30—C31—H31B 109.1
N4—C11—C10 119.3 (6) H31A—C31—H31B 107.8
N6—C12—C11 103.9 (6) C32—N8—C33 122.9 (9)
N6—C12—C13 124.6 (7) C32—N8—C34 120.7 (10)
C11—C12—C13 131.6 (7) C33—N8—C34 116.4 (12)
C12—C13—H13A 109.5 O1—C32—N8 123.0 (10)
C12—C13—H13B 109.5 O1—C32—H32 118.5
H13A—C13—H13B 109.5 N8—C32—H32 118.5
C7—N2—N3—C10 179.4 (6) C9—C10—C11—N4 8.2 (10)
C8—N2—N3—C10 −11.2 (7) N5—N6—C12—C11 0.3 (8)
C11—N4—N5—N6 0.6 (8) C14—N6—C12—C11 −173.0 (8)
N4—N5—N6—C12 −0.6 (8) N5—N6—C12—C13 178.3 (7)
N4—N5—N6—C14 173.7 (6) C14—N6—C12—C13 5.0 (12)
C7—N1—C1—C2 2.2 (15) N4—C11—C12—N6 0.1 (8)
C1'—N1—C1—C2 −110 (7) C10—C11—C12—N6 173.6 (7)
C7—N1—C1—C6 179.2 (7) N4—C11—C12—C13 −177.7 (7)
C1'—N1—C1—C6 67 (7) C10—C11—C12—C13 −4.2 (13)
C6—C1—C2—C3 0.0 C12—N6—C14—C19 125.9 (8)
N1—C1—C2—C3 176.8 (13) N5—N6—C14—C19 −47.1 (10)
C1—C2—C3—C4 0.0 C12—N6—C14—C15 −53.4 (11)
C2—C3—C4—C5 0.0 N5—N6—C14—C15 133.7 (7)
C3—C4—C5—C6 0.0 C19—C14—C15—C16 −0.5 (11)
C4—C5—C6—C1 0.0 N6—C14—C15—C16 178.7 (7)
C2—C1—C6—C5 0.0 C14—C15—C16—C17 1.8 (12)
N1—C1—C6—C5 −177.4 (11) C15—C16—C17—C18 −2.1 (12)
C7—N1—C1'—C2' 41.5 (13) C15—C16—C17—C20 179.8 (8)
C1—N1—C1'—C2' 114 (7) C16—C17—C18—C19 1.1 (12)
C7—N1—C1'—C6' −138.2 (8) C20—C17—C18—C19 179.2 (8)
C1—N1—C1'—C6' −66 (7) C17—C18—C19—C14 0.1 (12)
C6'—C1'—C2'—C3' 0.0 C15—C14—C19—C18 −0.5 (11)
N1—C1'—C2'—C3' −179.8 (11) N6—C14—C19—C18 −179.7 (7)
C1'—C2'—C3'—C4' 0.0 N2—C8—C21—C26 −139.9 (7)
C2'—C3'—C4'—C5' 0.0 C9—C8—C21—C26 107.8 (8)
C3'—C4'—C5'—C6' 0.0 N2—C8—C21—C22 42.8 (10)
C4'—C5'—C6'—C1' 0.0 C9—C8—C21—C22 −69.5 (9)
C2'—C1'—C6'—C5' 0.0 C26—C21—C22—C23 1.3 (12)
N1—C1'—C6'—C5' 179.8 (11) C8—C21—C22—C23 178.7 (7)
N3—N2—C7—N1 5.7 (9) C21—C22—C23—C24 −0.4 (12)
C8—N2—C7—N1 −161.8 (6) C22—C23—C24—C25 −1.2 (11)
N3—N2—C7—S1 −173.2 (4) C22—C23—C24—N7 −179.6 (7)
C8—N2—C7—S1 19.2 (9) C31—N7—C24—C25 24.7 (10)
C1—N1—C7—N2 −176.3 (9) C27—N7—C24—C25 162.7 (7)
C1'—N1—C7—N2 −169.9 (9) C31—N7—C24—C23 −156.9 (7)
C1—N1—C7—S1 2.6 (12) C27—N7—C24—C23 −18.9 (10)
C1'—N1—C7—S1 8.9 (12) C23—C24—C25—C26 1.8 (11)
C7—N2—C8—C21 64.7 (10) N7—C24—C25—C26 −179.7 (7)
N3—N2—C8—C21 −103.4 (7) C22—C21—C26—C25 −0.7 (11)
C7—N2—C8—C9 −175.3 (7) C8—C21—C26—C25 −178.2 (7)
N3—N2—C8—C9 16.5 (7) C24—C25—C26—C21 −0.9 (12)
N2—C8—C9—C10 −14.7 (7) C24—N7—C27—C28 167.4 (6)
C21—C8—C9—C10 104.7 (7) C31—N7—C27—C28 −53.1 (8)
N2—N3—C10—C11 −174.5 (6) N7—C27—C28—C29 57.4 (8)
N2—N3—C10—C9 0.0 (8) C27—C28—C29—C30 −58.0 (8)
C8—C9—C10—N3 10.2 (8) C28—C29—C30—C31 55.9 (9)
C8—C9—C10—C11 −175.6 (6) C24—N7—C31—C30 −170.6 (6)
N5—N4—C11—C12 −0.5 (8) C27—N7—C31—C30 50.2 (8)
N5—N4—C11—C10 −174.8 (6) C29—C30—C31—N7 −52.8 (9)
N3—C10—C11—C12 9.2 (11) C33—N8—C32—O1 −0.1 (4)
C9—C10—C11—C12 −164.8 (7) C34—N8—C32—O1 −179.8 (3)
N3—C10—C11—N4 −177.8 (7)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N1—H1···N3 0.88 2.13 2.597 (8) 112
C13—H13A···O1 0.98 2.56 3.466 (14) 154
C28—H28B···N5i 0.99 2.57 3.355 (10) 137

Symmetry code: (i) x, y, z−1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: XU5554).

References

  1. Abdel-Wahab, B. F., Abdel-Aziz, H. A. & Ahmed, E. M. (2009). Eur. J. Med. Chem. 44, 2632–2635. [DOI] [PubMed]
  2. Abdel-Wahab, B. F., Abdel-Latif, E., Mohamed, H. A. & Awad, G. E. A. (2012a). Eur. J. Med. Chem. 52, 263–268. [DOI] [PubMed]
  3. Abdel-Wahab, B. F., Abdel-Latif, E., Ng, S. W. & Tiekink, E. R. T. (2012b). Acta Cryst. E68, o1954-o1955. [DOI] [PMC free article] [PubMed]
  4. Agilent (2012). CrysAlis PRO Agilent Technologies, Yarnton, England.
  5. Brandenburg, K. (2006). DIAMOND Crystal Impact GbR, Bonn, Germany.
  6. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  7. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  8. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812024488/xu5554sup1.cif

e-68-o1985-sup1.cif (30.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812024488/xu5554Isup2.hkl

e-68-o1985-Isup2.hkl (162.7KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812024488/xu5554Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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