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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Jun 2;68(Pt 7):o1996. doi: 10.1107/S1600536812024439

4-[(2-Bromo­benzyl­idene)amino]-3-(pyridin-4-yl)-1H-1,2,4-triazole-5(4H)-thione

Wei Gao a,*, Xian Li a, Xin-Ling Wang a, Jing Yang a, Xue-Fen Wu a
PMCID: PMC3393270  PMID: 22807827

Abstract

In the title compound, C14H10BrN5S, the dihedral angle between the triazole ring and the pyridine and bromo­benzene rings are 26.42 (13) and 6.28 (13)°, respectively. The molecule exists as a thione in the solid state. In the crystal, mol­ecules are linked by N—H⋯N hydrogen bonds, generating [010] C(8) chains.

Related literature  

For related structures, see: Zou et al. (2008); Kashaev et al. (2010); Liu & Liu (2011); Liu, Pan, Weng, Tan et al. (2012); Liu, Tan, Weng & Liu (2012); Tan et al. (2012).graphic file with name e-68-o1996-scheme1.jpg

Experimental  

Crystal data  

  • C14H10BrN5S

  • M r = 360.24

  • Monoclinic, Inline graphic

  • a = 10.406 (3) Å

  • b = 17.299 (5) Å

  • c = 15.858 (4) Å

  • β = 103.719 (5)°

  • V = 2773.3 (13) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 3.12 mm−1

  • T = 113 K

  • 0.20 × 0.18 × 0.12 mm

Data collection  

  • Rigaku Saturn CCD diffractometer

  • Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005) T min = 0.575, T max = 0.706

  • 14119 measured reflections

  • 3293 independent reflections

  • 2565 reflections with I > 2σ(I)

  • R int = 0.036

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.030

  • wR(F 2) = 0.087

  • S = 1.08

  • 3293 reflections

  • 194 parameters

  • 1 restraint

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.54 e Å−3

  • Δρmin = −0.42 e Å−3

Data collection: CrystalClear (Rigaku/MSC, 2005); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812024439/hb6820sup1.cif

e-68-o1996-sup1.cif (17.9KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812024439/hb6820Isup2.hkl

e-68-o1996-Isup2.hkl (161.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812024439/hb6820Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N3—H3⋯N1i 0.90 (1) 1.95 (1) 2.821 (3) 163 (3)

Symmetry code: (i) Inline graphic.

Acknowledgments

We gratefully acknowledge financial support by the Doctoral Research Fund of Henan University of Traditional Chinese Medicine.

supplementary crystallographic information

Comment

Single-crystal X-ray diffraction analysis reveals that the title compound crystallizes in the monoclinic space group C2/c. As shown in Fig. 1, the dihedral angle between the pyridyl and triazole rings is 153.6 °. As shown in Fig. 2, the crystal structure is stabilized by intermolecular hydrogen bonds N—H···N.

Experimental

In round bottom flask, 4-pyridine carboxylic acid (0.01 mol) and hydrazine hydrate 99% (0.01 mol) were taken along with alcohol and the mixture was refluxed for 4 h. Then from the reaction mixture alcohol was removed under reduced pressure. Solid residue was obtained, recrystallized from ethanol. In a 250 ml round bottom flask, 4-pyridine hydrazide (0.075 mol) was taken. To this a solution of potassium hydroxide (0.075 mol) in 100 ml of absolute alcohol and carbon disulfide were added agitated for overnight. The reaction mixture was diluted with 200 ml of dry ether. The solid obtained was 15.05 g (80%). It was filtered and washed with dry ether. A mixture of potassium-pyridine-dithiocarbazate (0.1 mol) and hydrazine hydrate 5 ml (0.1 mol) was refluxed for 2 h with occasional shaking and the solution was poured into the cold water. The mixture was acidified with hydrochloric acid. The precipitate obtained was filtered, dried and recrystallized by using alcohol. A mixture of 5-pyridine-4-amino-3-mercapto-4(H)-1,2,4-triazole (0.01 mol) taken with 2-bromobenzaldehyde (0.01 mol) and concentrated sulfuric acid (0.5 ml) in ethanol 100 ml. The mixture was refluxed on water bath for several hours with TLC monitoring. The solid was obtained on cooling the mixture and poured in cold water was afforded the the title compound. Colourless prisms were grown from ethanol solution.

Refinement

All the H atoms were positioned geometrically (C—H = 0.93–0.97 Å) and refined as riding with Uiso(H) = 1.2Ueq(C) or 1.5Ueq(methyl C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I). Displacement ellipsoids are drawn at the 30% probability level and H atoms are shown as small spheres of arbitrary radii.

Fig. 2.

Fig. 2.

The crystal packing for (I).

Crystal data

C14H10BrN5S F(000) = 1440
Mr = 360.24 Dx = 1.726 Mg m3
Monoclinic, C2/c Mo Kα radiation, λ = 0.71073 Å
a = 10.406 (3) Å Cell parameters from 5149 reflections
b = 17.299 (5) Å θ = 2.3–27.9°
c = 15.858 (4) Å µ = 3.12 mm1
β = 103.719 (5)° T = 113 K
V = 2773.3 (13) Å3 Prism, colorless
Z = 8 0.20 × 0.18 × 0.12 mm

Data collection

Rigaku Saturn CCD diffractometer 3293 independent reflections
Radiation source: rotating anode 2565 reflections with I > 2σ(I)
Multilayer monochromator Rint = 0.036
Detector resolution: 14.63 pixels mm-1 θmax = 27.9°, θmin = 2.3°
ω and φ scans h = −13→13
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005) k = −22→22
Tmin = 0.575, Tmax = 0.706 l = −20→20
14119 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.087 H atoms treated by a mixture of independent and constrained refinement
S = 1.08 w = 1/[σ2(Fo2) + (0.0476P)2 + 0.9724P] where P = (Fo2 + 2Fc2)/3
3293 reflections (Δ/σ)max = 0.003
194 parameters Δρmax = 0.54 e Å3
1 restraint Δρmin = −0.42 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Br1 0.42237 (3) 1.115195 (15) 1.078191 (18) 0.02495 (10)
S1 0.04950 (6) 1.18904 (3) 0.90838 (4) 0.01831 (15)
N1 −0.2275 (2) 0.76260 (12) 0.76957 (13) 0.0170 (4)
N2 −0.1987 (2) 1.05219 (11) 0.75708 (13) 0.0135 (4)
N3 −0.1441 (2) 1.12183 (11) 0.78721 (13) 0.0135 (4)
N4 −0.02113 (18) 1.03665 (11) 0.86394 (12) 0.0110 (4)
N5 0.0722 (2) 0.99264 (12) 0.92068 (13) 0.0165 (4)
C1 −0.1154 (3) 0.86370 (13) 0.86163 (16) 0.0157 (5)
H1 −0.0638 0.8787 0.9170 0.019*
C2 −0.1571 (3) 0.78812 (14) 0.84586 (17) 0.0185 (5)
H2 −0.1341 0.7521 0.8923 0.022*
C3 −0.2600 (2) 0.81462 (13) 0.70517 (17) 0.0178 (5)
H3A −0.3098 0.7975 0.6502 0.021*
C4 −0.2249 (2) 0.89158 (13) 0.71470 (16) 0.0149 (5)
H4 −0.2511 0.9263 0.6673 0.018*
C5 −0.1507 (2) 0.91779 (13) 0.79426 (16) 0.0123 (5)
C6 −0.1234 (2) 1.00094 (13) 0.80478 (15) 0.0111 (4)
C7 −0.0371 (2) 1.11627 (13) 0.85297 (15) 0.0125 (5)
C8 0.1806 (2) 1.02341 (14) 0.96104 (16) 0.0177 (5)
H8 0.1978 1.0765 0.9533 0.021*
C9 0.2775 (2) 0.97532 (14) 1.01938 (15) 0.0158 (5)
C10 0.2607 (3) 0.89478 (14) 1.02189 (18) 0.0203 (5)
H10 0.1857 0.8714 0.9846 0.024*
C11 0.3519 (3) 0.84900 (15) 1.07796 (18) 0.0234 (6)
H11 0.3396 0.7946 1.0786 0.028*
C12 0.4613 (3) 0.88260 (16) 1.13319 (19) 0.0257 (6)
H12 0.5230 0.8511 1.1721 0.031*
C13 0.4808 (3) 0.96139 (16) 1.13185 (17) 0.0234 (6)
H13 0.5559 0.9843 1.1694 0.028*
C14 0.3892 (2) 1.00692 (14) 1.07490 (16) 0.0175 (5)
H3 −0.175 (3) 1.1661 (12) 0.761 (2) 0.049 (10)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Br1 0.01786 (15) 0.02020 (14) 0.03306 (18) −0.00296 (10) −0.00141 (11) −0.00368 (11)
S1 0.0216 (3) 0.0097 (3) 0.0195 (3) −0.0023 (2) −0.0033 (3) −0.0012 (2)
N1 0.0181 (11) 0.0111 (9) 0.0198 (12) −0.0002 (8) 0.0006 (9) −0.0007 (8)
N2 0.0148 (10) 0.0094 (9) 0.0149 (10) −0.0007 (7) 0.0005 (8) −0.0008 (8)
N3 0.0163 (10) 0.0082 (9) 0.0140 (11) 0.0002 (8) −0.0005 (9) 0.0015 (8)
N4 0.0113 (9) 0.0078 (9) 0.0124 (10) 0.0010 (7) −0.0001 (8) 0.0001 (8)
N5 0.0159 (10) 0.0134 (10) 0.0185 (11) 0.0026 (8) 0.0007 (9) 0.0012 (8)
C1 0.0190 (12) 0.0125 (10) 0.0135 (12) −0.0014 (9) −0.0003 (10) 0.0000 (9)
C2 0.0223 (13) 0.0137 (11) 0.0173 (13) 0.0006 (10) 0.0001 (11) 0.0031 (10)
C3 0.0193 (12) 0.0131 (11) 0.0187 (13) −0.0028 (9) 0.0001 (10) −0.0030 (10)
C4 0.0161 (12) 0.0144 (11) 0.0129 (12) 0.0004 (9) 0.0007 (10) 0.0025 (9)
C5 0.0095 (11) 0.0098 (10) 0.0168 (13) 0.0002 (8) 0.0017 (10) −0.0006 (9)
C6 0.0108 (11) 0.0115 (10) 0.0106 (11) −0.0002 (8) 0.0016 (9) −0.0008 (9)
C7 0.0140 (11) 0.0098 (10) 0.0139 (12) 0.0003 (9) 0.0038 (10) 0.0015 (9)
C8 0.0162 (12) 0.0149 (11) 0.0206 (13) 0.0005 (9) 0.0017 (11) −0.0011 (10)
C9 0.0143 (11) 0.0170 (11) 0.0159 (13) 0.0004 (9) 0.0032 (10) 0.0005 (10)
C10 0.0167 (12) 0.0197 (13) 0.0237 (15) −0.0002 (10) 0.0032 (11) −0.0007 (10)
C11 0.0266 (14) 0.0180 (13) 0.0257 (15) 0.0048 (11) 0.0064 (12) 0.0062 (11)
C12 0.0244 (14) 0.0285 (14) 0.0222 (15) 0.0100 (12) 0.0013 (12) 0.0065 (12)
C13 0.0157 (13) 0.0313 (15) 0.0207 (14) 0.0040 (11) −0.0005 (11) 0.0001 (12)
C14 0.0169 (12) 0.0175 (12) 0.0183 (13) 0.0019 (10) 0.0043 (11) −0.0003 (10)

Geometric parameters (Å, º)

Br1—C14 1.903 (3) C3—H3A 0.9500
S1—C7 1.671 (2) C4—C5 1.390 (3)
N1—C2 1.332 (3) C4—H4 0.9500
N1—C3 1.343 (3) C5—C6 1.468 (3)
N2—C6 1.300 (3) C8—C9 1.457 (3)
N2—N3 1.369 (3) C8—H8 0.9500
N3—C7 1.336 (3) C9—C14 1.393 (3)
N3—H3 0.896 (10) C9—C10 1.406 (3)
N4—N5 1.385 (3) C10—C11 1.385 (4)
N4—C6 1.386 (3) C10—H10 0.9500
N4—C7 1.393 (3) C11—C12 1.389 (4)
N5—C8 1.274 (3) C11—H11 0.9500
C1—C2 1.382 (3) C12—C13 1.379 (4)
C1—C5 1.402 (3) C12—H12 0.9500
C1—H1 0.9500 C13—C14 1.391 (3)
C2—H2 0.9500 C13—H13 0.9500
C3—C4 1.380 (3)
C2—N1—C3 117.0 (2) N4—C6—C5 127.6 (2)
C6—N2—N3 104.72 (19) N3—C7—N4 102.8 (2)
C7—N3—N2 114.15 (19) N3—C7—S1 127.00 (17)
C7—N3—H3 125 (2) N4—C7—S1 130.19 (19)
N2—N3—H3 121 (2) N5—C8—C9 118.5 (2)
N5—N4—C6 120.17 (18) N5—C8—H8 120.7
N5—N4—C7 132.0 (2) C9—C8—H8 120.7
C6—N4—C7 107.83 (19) C14—C9—C10 117.5 (2)
C8—N5—N4 119.8 (2) C14—C9—C8 121.7 (2)
C2—C1—C5 118.6 (2) C10—C9—C8 120.8 (2)
C2—C1—H1 120.7 C11—C10—C9 120.9 (3)
C5—C1—H1 120.7 C11—C10—H10 119.5
N1—C2—C1 124.0 (2) C9—C10—H10 119.5
N1—C2—H2 118.0 C10—C11—C12 120.0 (3)
C1—C2—H2 118.0 C10—C11—H11 120.0
N1—C3—C4 123.4 (2) C12—C11—H11 120.0
N1—C3—H3A 118.3 C13—C12—C11 120.4 (3)
C4—C3—H3A 118.3 C13—C12—H12 119.8
C3—C4—C5 119.4 (2) C11—C12—H12 119.8
C3—C4—H4 120.3 C12—C13—C14 119.3 (3)
C5—C4—H4 120.3 C12—C13—H13 120.4
C4—C5—C1 117.6 (2) C14—C13—H13 120.4
C4—C5—C6 118.3 (2) C13—C14—C9 121.9 (2)
C1—C5—C6 124.0 (2) C13—C14—Br1 116.6 (2)
N2—C6—N4 110.48 (19) C9—C14—Br1 121.48 (19)
N2—C6—C5 121.9 (2)
C6—N2—N3—C7 −0.5 (3) N2—N3—C7—N4 1.4 (3)
C6—N4—N5—C8 164.5 (2) N2—N3—C7—S1 −176.78 (17)
C7—N4—N5—C8 −16.5 (3) N5—N4—C7—N3 179.1 (2)
C3—N1—C2—C1 −0.7 (4) C6—N4—C7—N3 −1.7 (2)
C5—C1—C2—N1 1.2 (4) N5—N4—C7—S1 −2.8 (4)
C2—N1—C3—C4 −0.3 (4) C6—N4—C7—S1 176.36 (18)
N1—C3—C4—C5 0.7 (4) N4—N5—C8—C9 −179.17 (19)
C3—C4—C5—C1 −0.1 (3) N5—C8—C9—C14 −170.6 (2)
C3—C4—C5—C6 −175.3 (2) N5—C8—C9—C10 9.0 (4)
C2—C1—C5—C4 −0.8 (3) C14—C9—C10—C11 0.3 (4)
C2—C1—C5—C6 174.1 (2) C8—C9—C10—C11 −179.3 (2)
N3—N2—C6—N4 −0.7 (2) C9—C10—C11—C12 0.5 (4)
N3—N2—C6—C5 178.5 (2) C10—C11—C12—C13 −0.8 (4)
N5—N4—C6—N2 −179.16 (18) C11—C12—C13—C14 0.4 (4)
C7—N4—C6—N2 1.6 (3) C12—C13—C14—C9 0.4 (4)
N5—N4—C6—C5 1.7 (3) C12—C13—C14—Br1 179.2 (2)
C7—N4—C6—C5 −177.5 (2) C10—C9—C14—C13 −0.8 (4)
C4—C5—C6—N2 23.8 (3) C8—C9—C14—C13 178.8 (2)
C1—C5—C6—N2 −151.0 (2) C10—C9—C14—Br1 −179.52 (18)
C4—C5—C6—N4 −157.1 (2) C8—C9—C14—Br1 0.1 (3)
C1—C5—C6—N4 28.0 (4)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N3—H3···N1i 0.90 (1) 1.95 (1) 2.821 (3) 163 (3)

Symmetry code: (i) −x−1/2, y+1/2, −z+3/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB6820).

References

  1. Kashaev, A. G., Zimichev, A. V., Rybakov, V. B., Klimochkin, Y. N. & Zemtsova, M. N. (2010). Acta Cryst. E66, o3090. [DOI] [PMC free article] [PubMed]
  2. Liu, X.-F. & Liu, X.-H. (2011). Acta Cryst. E67, o202.
  3. Liu, X. H., Pan, L., Weng, J. Q., Tan, C. X., Li, Y. H., Wang, B. L. & Li, Z. M. (2012). Mol. Divers. doi:10.1007/s11030-011-9352-z. [DOI] [PubMed]
  4. Liu, X.-H., Tan, C.-X., Weng, J.-Q. & Liu, H.-J. (2012). Acta Cryst. E68, o493. [DOI] [PMC free article] [PubMed]
  5. Rigaku/MSC (2005). CrystalClear Rigaku/MSC Inc. The Woodlands, Texas, USA.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Tan, C. X., Shi, Y. X., Weng, J. Q., Liu, X. H., Li, B. J. & Zhao, W. G. (2012). Lett. Drug. Des. Discov. 9, 431–435.
  8. Zou, F., Xuan, W.-M., Fang, X.-M. & Zhang, H. (2008). Acta Cryst. E64, o213. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812024439/hb6820sup1.cif

e-68-o1996-sup1.cif (17.9KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812024439/hb6820Isup2.hkl

e-68-o1996-Isup2.hkl (161.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812024439/hb6820Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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