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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Jun 13;68(Pt 7):o2032. doi: 10.1107/S1600536812025421

N-(3-Amino­bicyclo­[2.2.1]heptan-2-yl)-4-methyl­benzene­sulfonamide

Alaa A-M Abdel-Aziz a,b,, Adel S El-Azab a,c, Magda A El-Sherbeny b, Seik Weng Ng d,e, Edward R T Tiekink d,*
PMCID: PMC3393301  PMID: 22807858

Abstract

In the title compound, C14H20N2O2S, the sulfonamide O atoms lie to one side of the benzene ring and the amino­bicyclo­hepta­nyl to the other side [Car—S—N—C torsion angle = −57.93 (11)°; ar = aromatic]. An intra­molecular N—H⋯N hydrogen bond is formed. In the crystal, a supra­molecular chain is formed along the b axis via N—H⋯O and N—H⋯N hydrogen bonds.

Related literature  

For chiral ligands in asymmetric catalytic reactions, see: Seo et al. (2001); Abdel-Aziz et al. (2004); Matsunaga et al. (2005); Yamakuchi et al. (2005).graphic file with name e-68-o2032-scheme1.jpg

Experimental  

Crystal data  

  • C14H20N2O2S

  • M r = 280.38

  • Monoclinic, Inline graphic

  • a = 10.1715 (2) Å

  • b = 6.1169 (1) Å

  • c = 11.5150 (3) Å

  • β = 110.332 (2)°

  • V = 671.80 (2) Å3

  • Z = 2

  • Cu Kα radiation

  • μ = 2.14 mm−1

  • T = 100 K

  • 0.30 × 0.20 × 0.10 mm

Data collection  

  • Agilent SuperNova Dual diffractometer with Atlas detector

  • Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012) T min = 0.566, T max = 0.814

  • 4721 measured reflections

  • 2750 independent reflections

  • 2731 reflections with I > 2σ(I)

  • R int = 0.014

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.024

  • wR(F 2) = 0.066

  • S = 1.03

  • 2750 reflections

  • 185 parameters

  • 4 restraints

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.22 e Å−3

  • Δρmin = −0.26 e Å−3

  • Absolute structure: Flack (1983), 1217 Friedel pairs

  • Flack parameter: −0.001 (10)

Data collection: CrysAlis PRO (Agilent, 2012); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812025421/lh5485sup1.cif

e-68-o2032-sup1.cif (18.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812025421/lh5485Isup2.hkl

e-68-o2032-Isup2.hkl (135KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812025421/lh5485Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1n⋯O1i 0.88 (1) 2.20 (1) 2.976 (2) 148 (2)
N1—H2n⋯N2 0.87 (1) 2.39 (2) 2.752 (2) 105 (2)
N2—H3n⋯N1i 0.89 (1) 2.04 (1) 2.907 (2) 166 (2)

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors extend their appreciation to the Research Center of Pharmacy, King Saud University, for funding this work. They also thank the Ministry of Higher Education (Malaysia) for funding structural studies through the High-Impact Research scheme (UM·C/HIR/MOHE/SC/12).

supplementary crystallographic information

Comment

The title compound (I) was synthesized in the context of the development of chiral ligands for asymmetric catalytic reactions (Seo et al., 2001; Abdel-Aziz et al., 2004; Matsunaga et al., 2005; Yamakuchi et al. 2005).

In (I), Fig. 1, the two S-bound O atoms lie to one side of the adjacent benzene ring with the O1 and O2 atoms lying -0.466 (1) and -0.771 (1) Å out of the plane, respectively, and the aminobicycloheptanyl residue lying to the other side, the C8—S1—N2—C2 torsion being -57.93 (11)°. An intramolecular N—H···N hydrogen bond is noted, Table 1.

Molecules are connected into a supramolecular chain along the b axis via N—H···O and N—H···N hydrogen bonds that generate 12-membered {···HNC2NH···OSNC2N} synthons, Fig. 2 and Table 1. The chains pack into a three-dimensional architecture without specific interactions between them, Fig. 3.

Experimental

To the mixture of 2-imidazolidinone (2.0 ml), water (2 ml), ethanol (6 ml) and Ba(OH)2.8H2O (20 ml) were added. This was heated at 413 K in a glass sealed tube for 24 h. The solvents were evaporated and the precipitate extracted three times with chloroform (10 ml × 3). The organic extract was dried and crystallized from ethanol to afford the title compound.

Refinement

Carbon-bound H-atoms were placed in calculated positions [C—H = 0.95 to 1.00 Å, Uiso(H) = 1.2–1.5Ueq(C)] and were included in the refinement in the riding model approximation. The amino H-atoms were refined with N—H = 0.88±0.01 Å.

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I) showing the atom-labelling scheme and displacement ellipsoids at the 50% probability level.

Fig. 2.

Fig. 2.

A view of the supramolecular helical chain along the b axis in (I). The N—H···O and N—H···N hydrogen bonds are shown as orange and blue dashed lines, respectively.

Fig. 3.

Fig. 3.

A view in projection down the b axis of the unit-cell contents for (I). The N—H···O and N—H···N (obscured) hydrogen bonds are shown as orange and blue dashed lines, respectively.

Crystal data

C14H20N2O2S F(000) = 300
Mr = 280.38 Dx = 1.386 Mg m3
Monoclinic, P21 Cu Kα radiation, λ = 1.54184 Å
Hall symbol: P 2yb Cell parameters from 3574 reflections
a = 10.1715 (2) Å θ = 4.1–76.4°
b = 6.1169 (1) Å µ = 2.14 mm1
c = 11.5150 (3) Å T = 100 K
β = 110.332 (2)° Prism, colourless
V = 671.80 (2) Å3 0.30 × 0.20 × 0.10 mm
Z = 2

Data collection

Agilent SuperNova Dual diffractometer with Atlas detector 2750 independent reflections
Radiation source: SuperNova (Cu) X-ray Source 2731 reflections with I > 2σ(I)
Mirror monochromator Rint = 0.014
Detector resolution: 10.4041 pixels mm-1 θmax = 76.6°, θmin = 4.1°
ω scan h = −11→12
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012) k = −7→7
Tmin = 0.566, Tmax = 0.814 l = −14→12
4721 measured reflections

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.024 H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.066 w = 1/[σ2(Fo2) + (0.049P)2 + 0.0858P] where P = (Fo2 + 2Fc2)/3
S = 1.03 (Δ/σ)max = 0.001
2750 reflections Δρmax = 0.22 e Å3
185 parameters Δρmin = −0.26 e Å3
4 restraints Absolute structure: Flack (1983), 1217 Friedel pairs
Primary atom site location: structure-invariant direct methods Flack parameter: −0.001 (10)

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
S1 0.26041 (3) 0.50378 (5) 0.72818 (2) 0.01602 (9)
O1 0.26695 (10) 0.73734 (17) 0.71708 (9) 0.0218 (2)
N1 0.52705 (11) 0.5254 (2) 1.10027 (10) 0.0184 (2)
N2 0.32587 (11) 0.44016 (18) 0.87334 (10) 0.0160 (2)
O2 0.32988 (10) 0.36603 (18) 0.66642 (9) 0.0215 (2)
C1 0.38324 (13) 0.5685 (2) 1.09495 (11) 0.0168 (3)
H1 0.3790 0.7246 1.1192 0.020*
C2 0.26899 (13) 0.5369 (2) 0.96230 (11) 0.0153 (2)
H2 0.2286 0.6832 0.9304 0.018*
C3 0.15457 (14) 0.4000 (2) 0.98927 (13) 0.0190 (3)
H3 0.0587 0.4149 0.9256 0.023*
C4 0.16743 (13) 0.4842 (3) 1.11857 (12) 0.0224 (3)
H4A 0.1085 0.4015 1.1559 0.027*
H4B 0.1486 0.6429 1.1196 0.027*
C5 0.32467 (14) 0.4279 (2) 1.17705 (12) 0.0198 (3)
H5 0.3666 0.4604 1.2676 0.024*
C6 0.32835 (14) 0.1852 (2) 1.14384 (13) 0.0213 (3)
H6A 0.3138 0.0901 1.2079 0.026*
H6B 0.4187 0.1470 1.1345 0.026*
C7 0.20485 (14) 0.1631 (2) 1.01838 (13) 0.0220 (3)
H7A 0.2373 0.1024 0.9533 0.026*
H7B 0.1296 0.0687 1.0268 0.026*
C8 0.07959 (14) 0.4382 (2) 0.67418 (11) 0.0164 (2)
C9 −0.01687 (14) 0.6042 (2) 0.66650 (12) 0.0200 (3)
H9 0.0144 0.7488 0.6912 0.024*
C10 −0.15935 (14) 0.5562 (2) 0.62230 (12) 0.0205 (3)
H10 −0.2253 0.6691 0.6170 0.025*
C11 −0.20671 (13) 0.3446 (2) 0.58568 (12) 0.0185 (3)
C12 −0.10771 (14) 0.1807 (2) 0.59531 (12) 0.0190 (3)
H12 −0.1387 0.0356 0.5715 0.023*
C13 0.03540 (14) 0.2258 (2) 0.63911 (12) 0.0180 (3)
H13 0.1017 0.1131 0.6449 0.022*
C14 −0.36173 (14) 0.2973 (3) 0.53354 (14) 0.0244 (3)
H14A −0.4059 0.3911 0.4615 0.037*
H14B −0.4036 0.3264 0.5969 0.037*
H14C −0.3765 0.1436 0.5083 0.037*
H1n 0.5811 (16) 0.480 (3) 1.1733 (11) 0.025 (4)*
H2n 0.530 (2) 0.412 (2) 1.0552 (16) 0.033 (5)*
H3n 0.357 (2) 0.3032 (19) 0.882 (2) 0.035 (5)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.01351 (14) 0.01864 (15) 0.01503 (14) −0.00197 (11) 0.00386 (10) −0.00003 (11)
O1 0.0213 (5) 0.0204 (5) 0.0199 (5) −0.0048 (4) 0.0026 (4) 0.0027 (4)
N1 0.0138 (5) 0.0199 (5) 0.0187 (5) −0.0012 (5) 0.0021 (4) 0.0008 (5)
N2 0.0140 (5) 0.0182 (5) 0.0151 (5) 0.0023 (4) 0.0040 (4) 0.0002 (4)
O2 0.0177 (5) 0.0296 (5) 0.0185 (4) 0.0000 (4) 0.0081 (4) −0.0028 (4)
C1 0.0169 (6) 0.0155 (6) 0.0161 (6) 0.0013 (4) 0.0032 (4) −0.0005 (4)
C2 0.0141 (5) 0.0153 (6) 0.0160 (5) 0.0026 (4) 0.0046 (4) 0.0002 (5)
C3 0.0133 (6) 0.0223 (6) 0.0217 (6) 0.0008 (5) 0.0064 (5) 0.0013 (5)
C4 0.0201 (6) 0.0266 (7) 0.0240 (6) 0.0055 (6) 0.0122 (5) 0.0031 (6)
C5 0.0196 (6) 0.0226 (6) 0.0176 (6) 0.0041 (5) 0.0069 (5) 0.0024 (5)
C6 0.0198 (6) 0.0204 (7) 0.0259 (7) 0.0021 (5) 0.0106 (5) 0.0057 (5)
C7 0.0180 (6) 0.0197 (6) 0.0306 (7) −0.0037 (5) 0.0113 (5) 0.0006 (6)
C8 0.0151 (6) 0.0188 (6) 0.0141 (6) −0.0009 (5) 0.0036 (4) 0.0007 (4)
C9 0.0195 (6) 0.0174 (6) 0.0216 (6) −0.0002 (5) 0.0053 (5) −0.0012 (5)
C10 0.0178 (6) 0.0217 (7) 0.0216 (6) 0.0033 (5) 0.0063 (5) 0.0020 (5)
C11 0.0155 (6) 0.0247 (7) 0.0146 (6) −0.0006 (5) 0.0041 (5) 0.0001 (5)
C12 0.0189 (6) 0.0183 (6) 0.0177 (6) −0.0022 (5) 0.0037 (5) −0.0010 (5)
C13 0.0171 (6) 0.0182 (6) 0.0175 (6) 0.0023 (5) 0.0046 (5) −0.0003 (5)
C14 0.0154 (6) 0.0326 (8) 0.0238 (7) −0.0015 (5) 0.0049 (5) −0.0024 (6)

Geometric parameters (Å, º)

S1—O2 1.4367 (10) C5—H5 1.0000
S1—O1 1.4380 (11) C6—C7 1.556 (2)
S1—N2 1.6172 (11) C6—H6A 0.9900
S1—C8 1.7707 (13) C6—H6B 0.9900
N1—C1 1.4665 (16) C7—H7A 0.9900
N1—H1n 0.875 (9) C7—H7B 0.9900
N1—H2n 0.873 (9) C8—C13 1.3884 (18)
N2—C2 1.4649 (16) C8—C9 1.3930 (19)
N2—H3n 0.888 (9) C9—C10 1.3902 (18)
C1—C5 1.5425 (18) C9—H9 0.9500
C1—C2 1.5771 (16) C10—C11 1.394 (2)
C1—H1 1.0000 C10—H10 0.9500
C2—C3 1.5502 (18) C11—C12 1.3977 (19)
C2—H2 1.0000 C11—C14 1.5076 (18)
C3—C7 1.5347 (19) C12—C13 1.3925 (19)
C3—C4 1.5376 (19) C12—H12 0.9500
C3—H3 1.0000 C13—H13 0.9500
C4—C5 1.5432 (18) C14—H14A 0.9800
C4—H4A 0.9900 C14—H14B 0.9800
C4—H4B 0.9900 C14—H14C 0.9800
C5—C6 1.537 (2)
O2—S1—O1 119.52 (6) C6—C5—H5 114.4
O2—S1—N2 105.89 (6) C1—C5—H5 114.4
O1—S1—N2 108.41 (6) C4—C5—H5 114.4
O2—S1—C8 108.84 (6) C5—C6—C7 103.51 (11)
O1—S1—C8 105.56 (6) C5—C6—H6A 111.1
N2—S1—C8 108.23 (6) C7—C6—H6A 111.1
C1—N1—H1n 112.5 (12) C5—C6—H6B 111.1
C1—N1—H2n 111.1 (13) C7—C6—H6B 111.1
H1n—N1—H2n 100.2 (18) H6A—C6—H6B 109.0
C2—N2—S1 120.32 (9) C3—C7—C6 102.75 (11)
C2—N2—H3n 120.9 (14) C3—C7—H7A 111.2
S1—N2—H3n 110.2 (14) C6—C7—H7A 111.2
N1—C1—C5 117.79 (10) C3—C7—H7B 111.2
N1—C1—C2 114.02 (10) C6—C7—H7B 111.2
C5—C1—C2 102.34 (10) H7A—C7—H7B 109.1
N1—C1—H1 107.4 C13—C8—C9 120.92 (13)
C5—C1—H1 107.4 C13—C8—S1 120.39 (10)
C2—C1—H1 107.4 C9—C8—S1 118.69 (11)
N2—C2—C3 115.36 (10) C10—C9—C8 119.41 (13)
N2—C2—C1 112.93 (10) C10—C9—H9 120.3
C3—C2—C1 102.95 (10) C8—C9—H9 120.3
N2—C2—H2 108.4 C9—C10—C11 120.88 (13)
C3—C2—H2 108.4 C9—C10—H10 119.6
C1—C2—H2 108.4 C11—C10—H10 119.6
C7—C3—C4 101.26 (11) C10—C11—C12 118.56 (12)
C7—C3—C2 109.72 (11) C10—C11—C14 120.16 (13)
C4—C3—C2 101.29 (10) C12—C11—C14 121.25 (13)
C7—C3—H3 114.4 C13—C12—C11 121.36 (13)
C4—C3—H3 114.4 C13—C12—H12 119.3
C2—C3—H3 114.4 C11—C12—H12 119.3
C3—C4—C5 94.26 (10) C8—C13—C12 118.85 (12)
C3—C4—H4A 112.9 C8—C13—H13 120.6
C5—C4—H4A 112.9 C12—C13—H13 120.6
C3—C4—H4B 112.9 C11—C14—H14A 109.5
C5—C4—H4B 112.9 C11—C14—H14B 109.5
H4A—C4—H4B 110.3 H14A—C14—H14B 109.5
C6—C5—C1 109.75 (11) C11—C14—H14C 109.5
C6—C5—C4 102.60 (11) H14A—C14—H14C 109.5
C1—C5—C4 99.82 (10) H14B—C14—H14C 109.5
O2—S1—N2—C2 −174.49 (10) C1—C5—C6—C7 −74.78 (12)
O1—S1—N2—C2 56.10 (11) C4—C5—C6—C7 30.64 (13)
C8—S1—N2—C2 −57.93 (11) C4—C3—C7—C6 −39.25 (12)
S1—N2—C2—C3 93.87 (12) C2—C3—C7—C6 67.22 (13)
S1—N2—C2—C1 −148.11 (9) C5—C6—C7—C3 5.12 (13)
N1—C1—C2—N2 8.26 (15) O2—S1—C8—C13 32.18 (13)
C5—C1—C2—N2 −120.07 (12) O1—S1—C8—C13 161.63 (11)
N1—C1—C2—C3 133.32 (11) N2—S1—C8—C13 −82.46 (12)
C5—C1—C2—C3 5.00 (12) O2—S1—C8—C9 −147.16 (10)
N2—C2—C3—C7 49.21 (14) O1—S1—C8—C9 −17.71 (12)
C1—C2—C3—C7 −74.26 (12) N2—S1—C8—C9 98.19 (11)
N2—C2—C3—C4 155.65 (10) C13—C8—C9—C10 −0.4 (2)
C1—C2—C3—C4 32.18 (12) S1—C8—C9—C10 178.91 (10)
C7—C3—C4—C5 56.71 (12) C8—C9—C10—C11 0.0 (2)
C2—C3—C4—C5 −56.28 (12) C9—C10—C11—C12 0.5 (2)
N1—C1—C5—C6 −58.83 (14) C9—C10—C11—C14 −177.73 (12)
C2—C1—C5—C6 67.07 (12) C10—C11—C12—C13 −0.68 (19)
N1—C1—C5—C4 −166.13 (11) C14—C11—C12—C13 177.57 (12)
C2—C1—C5—C4 −40.23 (12) C9—C8—C13—C12 0.3 (2)
C3—C4—C5—C6 −53.44 (12) S1—C8—C13—C12 −179.03 (10)
C3—C4—C5—C1 59.52 (12) C11—C12—C13—C8 0.3 (2)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N1—H1n···O1i 0.88 (1) 2.20 (1) 2.976 (2) 148 (2)
N1—H2n···N2 0.87 (1) 2.39 (2) 2.752 (2) 105 (2)
N2—H3n···N1i 0.89 (1) 2.04 (1) 2.907 (2) 166 (2)

Symmetry code: (i) −x+1, y−1/2, −z+2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: LH5485).

References

  1. Abdel-Aziz, A. A.-M., El Bialy, S. A. A., Goda, F. E. & Kunieda, T. (2004). Tetrahedron Lett. 45, 8073–8077.
  2. Agilent (2012). CrysAlis PRO Agilent Technologies, Yarnton, England.
  3. Brandenburg, K. (2006). DIAMOND Crystal Impact GbR, Bonn, Germany.
  4. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  5. Flack, H. D. (1983). Acta Cryst. A39, 876–881.
  6. Matsunaga, H., Ishizuka, T. & Kunieda, T. (2005). Tetrahedron Lett. 46, 3645–3648.
  7. Seo, R., Ishizuka, T., Abdel-Aziz, A. A.-M. & Kunieda, T. (2001). Tetrahedron Lett. 42, 6353–6355.
  8. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  9. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.
  10. Yamakuchi, M., Matsunaga, H., Tokuda, R., Ishizuka, T., Nakajima, M. & Kuniedab, T. (2005). Tetrahedron Lett. 46, 4019–4022.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812025421/lh5485sup1.cif

e-68-o2032-sup1.cif (18.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812025421/lh5485Isup2.hkl

e-68-o2032-Isup2.hkl (135KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812025421/lh5485Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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