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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Jun 30;68(Pt 7):o2260–o2261. doi: 10.1107/S1600536812028735

2-{2-[(E)-(2-Benzoyl­hydrazin-1-yl­idene)meth­yl]phen­oxy}acetic acid

Hoong-Kun Fun a,*,, Tze Shyang Chia a, Ahmed M Alafeefy b, Hatem A Abdel-Aziz c
PMCID: PMC3394044  PMID: 22798909

Abstract

In the title compound, C16H14N2O4, the dihedral angle between the aromatic rings is 12.45 (6)°. The central C(=O)—N—N=C bridge is roughly planar (r.m.s. deviation = 0.0346 Å) and makes dihedral angles of 13.01 (7) and 0.56 (7)° with the attached phenyl and benzene rings, respectively. The acetic acid unit (r.m.s. deviation = 0.0066 Å) is twisted from its attached benzene ring [dihedral angle = 19.48 (6)°]. In the crystal, mol­ecules are linked by O—H⋯(O,N), N—H⋯O and C—H⋯O hydrogen bonds into sheets lying parallel to the bc plane. A weak aromatic π–π stacking inter­action is also observed [centroid–centroid distance = 3.7330 (7) Å].

Related literature  

For background to the biological activity of hydrazones, see: Abdel-Aziz & Mekawey (2009). For a related structure, see: Rassem et al. (2012). For further synthetic details, see: Desai et al. (2000). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).graphic file with name e-68-o2260-scheme1.jpg

Experimental  

Crystal data  

  • C16H14N2O4

  • M r = 298.29

  • Monoclinic, Inline graphic

  • a = 12.2173 (7) Å

  • b = 7.8523 (5) Å

  • c = 15.6025 (9) Å

  • β = 108.577 (1)°

  • V = 1418.82 (15) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.10 mm−1

  • T = 100 K

  • 0.32 × 0.21 × 0.14 mm

Data collection  

  • Bruker APEX DUO CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2009) T min = 0.969, T max = 0.986

  • 14301 measured reflections

  • 4122 independent reflections

  • 3463 reflections with I > 2σ(I)

  • R int = 0.024

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.040

  • wR(F 2) = 0.124

  • S = 1.07

  • 4122 reflections

  • 203 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.42 e Å−3

  • Δρmin = −0.25 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812028735/hb6868sup1.cif

e-68-o2260-sup1.cif (24.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812028735/hb6868Isup2.hkl

e-68-o2260-Isup2.hkl (202KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812028735/hb6868Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O3—H1O3⋯O1i 0.88 1.99 2.7194 (14) 139
O3—H1O3⋯N2i 0.88 2.30 3.0464 (12) 142
N1—H1N1⋯O4ii 0.925 (17) 2.009 (16) 2.9131 (13) 165.4 (16)
C5—H5A⋯O4ii 0.93 2.55 3.4058 (16) 153
C11—H11A⋯O1iii 0.93 2.51 3.3791 (13) 155
C15—H15A⋯O1iv 0.97 2.59 3.5434 (15) 167

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic.

Acknowledgments

HKF and TSC thank Universiti Sains Malaysia (USM) for the Research University Grant (1001/PFIZIK/811160). TSC also thanks the Malaysian Government and USM for the award of a research fellowship. The authors thank the Deanship of Scientific Research and the Research Center, College of Pharmacy, King Saud University.

supplementary crystallographic information

Comment

In continuation to our interest in the chemistry and biological activities of hydrazones (Abdel-Aziz et al., 2009), we now report herein the crystal structure of the title compound.

The asymmetric unit of the title compound is shown in Fig. 1. The C1–C6 and C9–C14 benzene rings are slightly twisted from each other as indicated by the dihedral angle of 12.45 (6)°. The central C7(═O1)—N1—N2═C8 bridge is nearly planar [r.m.s. deviation = 0.0346 Å], extended in a zigzag conformation and makes dihedral angles of 13.01 (7) and 0.56 (7)° with the C1–C6 and C9–C14 benzene rings, respectively. The acetic acid unit [C15/C16/O3/O4; r.m.s. deviation = 0.0066 Å] is twisted from its attached C9–C14 benzene ring with dihedral angle of 19.48 (6)°. Bond lengths and angles are comparable to those in a related structure (Rassem et al., 2012).

In the crystal (Fig. 2), molecules are linked by O3—H1O3···O1, O3—H1O3···N2, N1—H1N1···O4, C5—H5A···O4, C11—H11A···O1 and C15—H15A···O1 hydrogen bonds (Table 1) into two-dimensional networks parallel to bc plane. π-π interaction is also observed with Cg1···Cg2 distance of 3.7330 (7) Å [symmentry operator = 1 - x,-y,-z], where Cg1 and Cg2 are the centroids of C1–C6 and C9–C14 rings, respectively.

Experimental

The title compound was prepared by heating 2-(2-formylphenoxy)acetic acid with benzohydrazide in absolute ethanol for 4 h (Desai et al., 2000). Colourless blocks were obtained by slow evaporation from EtOH/DMF.

Refinement

The atoms H1O3 and H1N1 were located in a difference fourier map. Atom H1O3 was then fixed at its found location [O3—H1O3 = 0.8843 Å] and refined using a riding model with Uiso(H) = 1.2Ueq(O), whereas the atom H1N1 was refined freely [N1—H1N1 = 0.924 (17) Å]. The remaining H atoms were positioned geometrically [C—H = 0.93 and 0.97 Å] and refined with Uiso(H) = 1.2Ueq(C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with 50% probability displacement ellipsoids.

Fig. 2.

Fig. 2.

The crystal packing of the title compound. The dashed lines represent the hydrogen bonds. For clarity sake, hydrogen atoms not involved in hydrogen bonding have been omitted.

Crystal data

C16H14N2O4 F(000) = 624
Mr = 298.29 Dx = 1.396 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 5671 reflections
a = 12.2173 (7) Å θ = 2.8–30.1°
b = 7.8523 (5) Å µ = 0.10 mm1
c = 15.6025 (9) Å T = 100 K
β = 108.577 (1)° Block, colourless
V = 1418.82 (15) Å3 0.32 × 0.21 × 0.14 mm
Z = 4

Data collection

Bruker APEX DUO CCD diffractometer 4122 independent reflections
Radiation source: fine-focus sealed tube 3463 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.024
φ and ω scans θmax = 30.1°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Bruker, 2009) h = −17→16
Tmin = 0.969, Tmax = 0.986 k = −11→10
14301 measured reflections l = −22→22

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.124 H atoms treated by a mixture of independent and constrained refinement
S = 1.07 w = 1/[σ2(Fo2) + (0.0673P)2 + 0.394P] where P = (Fo2 + 2Fc2)/3
4122 reflections (Δ/σ)max < 0.001
203 parameters Δρmax = 0.42 e Å3
0 restraints Δρmin = −0.25 e Å3

Special details

Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.70132 (7) 0.06520 (12) 0.21655 (5) 0.0260 (2)
O2 0.35596 (7) 0.38508 (10) −0.16701 (5) 0.01834 (17)
O3 0.48909 (8) 0.40025 (12) −0.26386 (6) 0.0273 (2)
H1O3 0.5341 0.4088 −0.2982 0.033*
O4 0.35806 (9) 0.53387 (12) −0.37939 (6) 0.0305 (2)
N1 0.64695 (7) 0.09189 (11) 0.06501 (6) 0.01427 (18)
N2 0.55352 (7) 0.18816 (11) 0.06821 (6) 0.01471 (18)
C1 0.88465 (10) −0.14596 (14) 0.22331 (7) 0.0202 (2)
H1A 0.8587 −0.1404 0.2732 0.024*
C2 0.98417 (10) −0.23668 (15) 0.22871 (9) 0.0262 (2)
H2A 1.0239 −0.2935 0.2818 0.031*
C3 1.02450 (10) −0.24288 (17) 0.15531 (10) 0.0304 (3)
H3A 1.0920 −0.3018 0.1594 0.036*
C4 0.96375 (11) −0.16065 (17) 0.07552 (10) 0.0299 (3)
H4A 0.9907 −0.1654 0.0261 0.036*
C5 0.86271 (10) −0.07092 (15) 0.06869 (8) 0.0221 (2)
H5A 0.8220 −0.0170 0.0149 0.027*
C6 0.82339 (9) −0.06286 (13) 0.14308 (7) 0.0162 (2)
C7 0.71940 (9) 0.03547 (13) 0.14467 (7) 0.01526 (19)
C8 0.49302 (8) 0.25514 (13) −0.00687 (6) 0.01392 (19)
H8A 0.5128 0.2371 −0.0590 0.017*
C9 0.39275 (8) 0.36004 (13) −0.01025 (6) 0.01350 (19)
C10 0.36525 (9) 0.40247 (14) 0.06745 (7) 0.0177 (2)
H10A 0.4114 0.3619 0.1233 0.021*
C11 0.27065 (10) 0.50378 (15) 0.06311 (7) 0.0220 (2)
H11A 0.2542 0.5322 0.1156 0.026*
C12 0.20069 (10) 0.56235 (15) −0.02047 (7) 0.0206 (2)
H12A 0.1360 0.6278 −0.0239 0.025*
C13 0.22630 (9) 0.52432 (14) −0.09895 (7) 0.0169 (2)
H13A 0.1793 0.5643 −0.1546 0.020*
C14 0.32297 (8) 0.42582 (13) −0.09354 (6) 0.01383 (19)
C15 0.31286 (9) 0.48856 (14) −0.24511 (7) 0.0180 (2)
H15A 0.3096 0.6062 −0.2272 0.022*
H15B 0.2352 0.4528 −0.2792 0.022*
C16 0.38970 (10) 0.47431 (14) −0.30367 (7) 0.0196 (2)
H1N1 0.6582 (14) 0.066 (2) 0.0106 (11) 0.030 (4)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0283 (4) 0.0379 (5) 0.0125 (3) 0.0126 (4) 0.0072 (3) 0.0028 (3)
O2 0.0218 (4) 0.0241 (4) 0.0112 (3) 0.0062 (3) 0.0082 (3) 0.0036 (3)
O3 0.0275 (4) 0.0309 (5) 0.0311 (4) 0.0042 (4) 0.0200 (4) 0.0053 (4)
O4 0.0533 (6) 0.0261 (4) 0.0172 (4) 0.0037 (4) 0.0184 (4) 0.0046 (3)
N1 0.0150 (4) 0.0165 (4) 0.0117 (4) 0.0012 (3) 0.0048 (3) −0.0007 (3)
N2 0.0143 (4) 0.0158 (4) 0.0141 (4) 0.0005 (3) 0.0046 (3) −0.0013 (3)
C1 0.0198 (5) 0.0167 (5) 0.0203 (5) 0.0007 (4) 0.0010 (4) −0.0014 (4)
C2 0.0198 (5) 0.0185 (5) 0.0328 (6) 0.0023 (4) −0.0023 (4) −0.0009 (4)
C3 0.0182 (5) 0.0232 (6) 0.0491 (8) 0.0042 (4) 0.0097 (5) −0.0008 (5)
C4 0.0269 (6) 0.0282 (6) 0.0414 (7) 0.0040 (5) 0.0202 (5) −0.0003 (5)
C5 0.0216 (5) 0.0227 (5) 0.0247 (5) 0.0018 (4) 0.0111 (4) 0.0008 (4)
C6 0.0143 (4) 0.0145 (4) 0.0187 (5) −0.0008 (4) 0.0037 (4) −0.0016 (4)
C7 0.0160 (4) 0.0160 (4) 0.0138 (4) −0.0006 (4) 0.0047 (3) −0.0003 (3)
C8 0.0153 (4) 0.0142 (4) 0.0128 (4) −0.0021 (3) 0.0051 (3) −0.0007 (3)
C9 0.0147 (4) 0.0133 (4) 0.0127 (4) −0.0022 (3) 0.0047 (3) −0.0007 (3)
C10 0.0218 (5) 0.0194 (5) 0.0122 (4) 0.0003 (4) 0.0055 (4) 0.0000 (4)
C11 0.0273 (5) 0.0247 (5) 0.0170 (5) 0.0037 (4) 0.0114 (4) −0.0021 (4)
C12 0.0206 (5) 0.0225 (5) 0.0214 (5) 0.0044 (4) 0.0103 (4) −0.0003 (4)
C13 0.0164 (4) 0.0188 (5) 0.0157 (4) 0.0015 (4) 0.0051 (4) 0.0018 (4)
C14 0.0159 (4) 0.0152 (4) 0.0115 (4) −0.0017 (3) 0.0059 (3) −0.0007 (3)
C15 0.0187 (5) 0.0234 (5) 0.0120 (4) 0.0017 (4) 0.0050 (4) 0.0040 (4)
C16 0.0289 (6) 0.0170 (5) 0.0160 (4) −0.0020 (4) 0.0117 (4) −0.0007 (4)

Geometric parameters (Å, º)

O1—C7 1.2325 (12) C5—C6 1.3918 (15)
O2—C14 1.3686 (11) C5—H5A 0.9300
O2—C15 1.4191 (12) C6—C7 1.4936 (14)
O3—C16 1.3107 (15) C8—C9 1.4631 (14)
O3—H1O3 0.8843 C8—H8A 0.9300
O4—C16 1.2136 (13) C9—C10 1.3975 (13)
N1—C7 1.3504 (13) C9—C14 1.4059 (13)
N1—N2 1.3831 (11) C10—C11 1.3869 (15)
N1—H1N1 0.924 (17) C10—H10A 0.9300
N2—C8 1.2821 (13) C11—C12 1.3901 (16)
C1—C2 1.3884 (16) C11—H11A 0.9300
C1—C6 1.3985 (15) C12—C13 1.3895 (14)
C1—H1A 0.9300 C12—H12A 0.9300
C2—C3 1.3843 (19) C13—C14 1.3916 (14)
C2—H2A 0.9300 C13—H13A 0.9300
C3—C4 1.389 (2) C15—C16 1.5084 (14)
C3—H3A 0.9300 C15—H15A 0.9700
C4—C5 1.3956 (16) C15—H15B 0.9700
C4—H4A 0.9300
C14—O2—C15 117.23 (8) C9—C8—H8A 120.1
C16—O3—H1O3 109.9 C10—C9—C14 118.14 (9)
C7—N1—N2 116.90 (8) C10—C9—C8 122.20 (9)
C7—N1—H1N1 121.8 (10) C14—C9—C8 119.62 (8)
N2—N1—H1N1 121.3 (10) C11—C10—C9 121.42 (9)
C8—N2—N1 115.68 (8) C11—C10—H10A 119.3
C2—C1—C6 120.16 (11) C9—C10—H10A 119.3
C2—C1—H1A 119.9 C10—C11—C12 119.29 (9)
C6—C1—H1A 119.9 C10—C11—H11A 120.4
C3—C2—C1 120.23 (11) C12—C11—H11A 120.4
C3—C2—H2A 119.9 C13—C12—C11 120.79 (10)
C1—C2—H2A 119.9 C13—C12—H12A 119.6
C2—C3—C4 119.72 (11) C11—C12—H12A 119.6
C2—C3—H3A 120.1 C12—C13—C14 119.41 (9)
C4—C3—H3A 120.1 C12—C13—H13A 120.3
C3—C4—C5 120.67 (12) C14—C13—H13A 120.3
C3—C4—H4A 119.7 O2—C14—C13 123.35 (9)
C5—C4—H4A 119.7 O2—C14—C9 115.76 (9)
C6—C5—C4 119.43 (11) C13—C14—C9 120.88 (9)
C6—C5—H5A 120.3 O2—C15—C16 110.21 (9)
C4—C5—H5A 120.3 O2—C15—H15A 109.6
C5—C6—C1 119.78 (10) C16—C15—H15A 109.6
C5—C6—C7 123.97 (9) O2—C15—H15B 109.6
C1—C6—C7 116.22 (9) C16—C15—H15B 109.6
O1—C7—N1 121.36 (9) H15A—C15—H15B 108.1
O1—C7—C6 120.86 (9) O4—C16—O3 126.30 (10)
N1—C7—C6 117.77 (9) O4—C16—C15 119.63 (11)
N2—C8—C9 119.75 (8) O3—C16—C15 114.03 (9)
N2—C8—H8A 120.1
C7—N1—N2—C8 172.93 (9) N2—C8—C9—C14 −176.62 (9)
C6—C1—C2—C3 1.17 (17) C14—C9—C10—C11 1.25 (16)
C1—C2—C3—C4 −1.25 (19) C8—C9—C10—C11 179.21 (10)
C2—C3—C4—C5 0.4 (2) C9—C10—C11—C12 0.95 (17)
C3—C4—C5—C6 0.59 (19) C10—C11—C12—C13 −1.72 (18)
C4—C5—C6—C1 −0.67 (17) C11—C12—C13—C14 0.25 (17)
C4—C5—C6—C7 177.28 (11) C15—O2—C14—C13 20.08 (14)
C2—C1—C6—C5 −0.20 (16) C15—O2—C14—C9 −160.56 (9)
C2—C1—C6—C7 −178.31 (10) C12—C13—C14—O2 −178.65 (10)
N2—N1—C7—O1 1.68 (15) C12—C13—C14—C9 2.02 (16)
N2—N1—C7—C6 −177.63 (8) C10—C9—C14—O2 177.88 (9)
C5—C6—C7—O1 −165.87 (11) C8—C9—C14—O2 −0.13 (14)
C1—C6—C7—O1 12.14 (15) C10—C9—C14—C13 −2.74 (15)
C5—C6—C7—N1 13.44 (16) C8—C9—C14—C13 179.25 (9)
C1—C6—C7—N1 −168.54 (9) C14—O2—C15—C16 157.84 (9)
N1—N2—C8—C9 −179.66 (8) O2—C15—C16—O4 169.40 (10)
N2—C8—C9—C10 5.46 (15) O2—C15—C16—O3 −12.74 (13)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
O3—H1O3···O1i 0.88 1.99 2.7194 (14) 139
O3—H1O3···N2i 0.88 2.30 3.0464 (12) 142
N1—H1N1···O4ii 0.925 (17) 2.009 (16) 2.9131 (13) 165.4 (16)
C5—H5A···O4ii 0.93 2.55 3.4058 (16) 153
C11—H11A···O1iii 0.93 2.51 3.3791 (13) 155
C15—H15A···O1iv 0.97 2.59 3.5434 (15) 167

Symmetry codes: (i) x, −y+1/2, z−1/2; (ii) −x+1, y−1/2, −z−1/2; (iii) −x+1, y+1/2, −z+1/2; (iv) −x+1, −y+1, −z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB6868).

References

  1. Abdel-Aziz, H. A. & Mekawey, A. A. I. (2009). Eur. J. Med. Chem. 44, 4985–4997. [DOI] [PubMed]
  2. Bruker (2009). SADABS, APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Cosier, J. & Glazer, A. M. (1986). J. Appl. Cryst. 19, 105–107.
  4. Desai, N. C., Dave, D., Shah, M. D. & Vyas, G. D. (2000). Indian J. Chem. Sect. B, 39, 277–282.
  5. Rassem, H. H., Salhin, A., Bin Salleh, B., Rosli, M. M. & Fun, H.-K. (2012). Acta Cryst. E68, o1832. [DOI] [PMC free article] [PubMed]
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812028735/hb6868sup1.cif

e-68-o2260-sup1.cif (24.3KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812028735/hb6868Isup2.hkl

e-68-o2260-Isup2.hkl (202KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812028735/hb6868Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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