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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Jun 30;68(Pt 7):o2284. doi: 10.1107/S1600536812028176

Ethyl (E)-3-hy­droxy-2-{N-[2-(thio­phen-2-yl)ethen­yl]carbamo­yl}but-2-enoate

Bao-Shuo Liu a, Sheng-Yin Zhao a,*
PMCID: PMC3394063  PMID: 22798928

Abstract

In the title compound, C13H15NO4S, there are two independent but conformationally similar mol­ecules in the asymmetric unit, both having an E conformation of the side-chain C=C group. Intra­molecular N—H⋯O and O—H⋯O hydrogen-bonding inter­actions are present in both molecules. In the crystal, one of the mol­ecule types is linked through inter­molecular hy­droxy–ketone O—H⋯O inter­actions, forming one-dimensional chains extending along [010], whereas the other mol­ecule type shows no associations.

Related literature  

For applications of 4-hy­droxy-2-pyridones, see: Buisson et al. (1996); Jessen & Gademann (2010). For general background to the synthesis, see: Rigby & Burkhardt (1986); Rigby & Qabar (1989). For the structure of a similar compound, see: Zhao & Huang (2012).graphic file with name e-68-o2284-scheme1.jpg

Experimental  

Crystal data  

  • C13H15NO4S

  • M r = 281.33

  • Monoclinic, Inline graphic

  • a = 14.0185 (15) Å

  • b = 13.1232 (14) Å

  • c = 15.0141 (16) Å

  • β = 96.853 (2)°

  • V = 2742.4 (5) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 0.25 mm−1

  • T = 293 K

  • 0.32 × 0.21 × 0.15 mm

Data collection  

  • Bruker SMART CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2003) T min = 0.394, T max = 1.000

  • 15596 measured reflections

  • 5099 independent reflections

  • 3538 reflections with I > 2σ(I)

  • R int = 0.061

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.057

  • wR(F 2) = 0.179

  • S = 1.05

  • 5099 reflections

  • 357 parameters

  • 1 restraint

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.42 e Å−3

  • Δρmin = −0.34 e Å−3

Data collection: SMART (Bruker, 2003); cell refinement: SAINT (Bruker, 2003); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812028176/zs2216sup1.cif

e-68-o2284-sup1.cif (24.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812028176/zs2216Isup2.hkl

e-68-o2284-Isup2.hkl (249.7KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812028176/zs2216Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1′—H1′A⋯O3′ 0.77 (3) 1.98 (3) 2.615 (3) 139 (3)
N1—H1A⋯O3 0.68 (3) 2.10 (3) 2.637 (3) 137 (3)
O2′—H2′⋯O1′ 0.82 1.65 2.399 (3) 152
O2—H2A⋯O1 0.82 1.67 2.419 (3) 151
O2—H2A⋯O3i 0.82 2.48 2.936 (3) 117

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors acknowledge financial support from the National Natural Science Foundation of China (grant No. 21072029) and the Shanghai Municipal Natural Science Foundation (grant No. 10ZR1400700).

supplementary crystallographic information

Comment

The derivatives of 4-hydroxy-2-pyridones exhibit a wide range of biological activities (Buisson et al., 1996; Jessen & Gademann, 2010). The title compound, C13H15NO4S, is an important intermediate in the synthesis of 4-hydroxy-2-pyridone derivatives (Rigby & Burkhardt, 1986; Rigby & Qabar, 1989). In the title compound, there are two independent but conformationally similar molecules in the asymmetric unit (Figs. 1 and 2), both of which have an E configuration of the side chain C5═C6. The molecular conformation is stabilized by intramolecular N—H···Oketone and hydroxyl O—H···Oketone hydrogen bonds (Table 1, Figs. 1 and 2).

In the crystal, only one of the molecule types is linked through intermolecular hydroxyl O—H···Oketone interactions forming one-dimensional chain structures extending along (010) (Fig. 3), whereas the other molecule type is unassociated. The thiophene rings have normal hydrophobic contacts without any stacking interactions. For the structure of a similar compound, see Zhao & Huang (2012).

Experimental

To an ice-cooled solution of 3-(2-thienyl)acrylic acid (5.0 g, 32.5 mmol) in 70 ml of ethyl acetate was added triethylamine (4.3 g, 42.2 mmol) and diphenyl phosphorazidate (DPPA, 11.6 g, 42.2 mmol). The solution was stirred at room temperature for 4 h. The acyl azide product was washed by dilution with cold water. The organic layers were dried over MgSO4, and the solvent was removed under reduced pressure (< 318 K). The acyl azide was dissolved in 50 ml of benzene and heated under reflux until azide decomposition was complete. The reaction mixture was then cooled to 273 K and ethyl sodio-acetoacetate [prepared from ethyl acetoacetate (5.07 g, 39.0 mmol) and sodium hydride (1.1 g, 60% dispersion in oil, 45.5 mmol) in toluene (100 ml) at 273 K] was added. After warming to room temperature for 2 h, the mixture was quenched with saturated aqueous ammonium chloride solution, rinsed with brine, and dried over MgSO4. The solvent was removed in vacuo to give green crystals: 5.57 g, yield, 61.0% (m.p. 366–368 K). 1H NMR (400 MHz, chloroform-d) 1.37 (t, J = 7.1 Hz, 3H, CH3), 2.47 (s, 3H, CH3), 4.29 (q, J = 7.1 Hz, 2H, CH2), 6.41 (d, J = 14.5 Hz, 1H, =CH), 6.91 (s, 1H, Ar—H), 6.93 (d, J = 4.4 Hz, 1H, Ar—H), 7.10 (d, J = 4.9 Hz, 1H, Ar—H), 7.41 (dd, J = 14.3, 10.8 Hz, 1H, =CH), 11.06 (d, J = 10.0 Hz, 1H, NH), 18.04 (s, 1H, OH). Crystals suitable for single-crystal X-ray diffraction were grown by slow evaporation at room temperature from a solution in a mixture of hexane and ethyl acetate (10:1).

Refinement

The amine hydrogen atom was located in a difference-Fourier map and refined freely. Other hydrogen atoms were positioned geometrically and refined using a riding model with O—H = 0.82 Å, C—H = 0.93 Å (CH), 0.96 Å (CH3) or 0.97 Å (CH2). Isotropic displacement parameters for these atoms were set to 1.2 (CH, CH2) or 1.5 (OH, CH3) times Ueq of the parent atom.

Figures

Fig. 1.

Fig. 1.

The atom-numbering scheme of the first molecule in the asymmetric unit of the title compound, with displacement ellipsoids drawn at the 30% probability level. Hydrogen bonds are shown as dashed lines.

Fig. 2.

Fig. 2.

The atom-numbering scheme of the second molecule in the asymmetric unit of the title compound.

Fig. 3.

Fig. 3.

Molecular packing of the title compound viewed down the a axis of the unit cell, with O—H···O interactions shown as dashed lines.

Crystal data

C13H15NO4S F(000) = 1184
Mr = 281.33 Dx = 1.363 Mg m3
Monoclinic, P21/n Melting point = 366–368 K
Hall symbol: -P 2yn Mo Kα radiation, λ = 0.71073 Å
a = 14.0185 (15) Å Cell parameters from 3746 reflections
b = 13.1232 (14) Å θ = 4.9–26.5°
c = 15.0141 (16) Å µ = 0.25 mm1
β = 96.853 (2)° T = 293 K
V = 2742.4 (5) Å3 Prismatic, white
Z = 8 0.32 × 0.21 × 0.15 mm

Data collection

Bruker SMART CCD area-detector diffractometer 5099 independent reflections
Radiation source: fine-focus sealed tube 3538 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.061
φ and ω scans θmax = 25.5°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2003) h = −15→16
Tmin = 0.394, Tmax = 1.000 k = −15→14
15596 measured reflections l = −18→17

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.057 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.179 H atoms treated by a mixture of independent and constrained refinement
S = 1.05 w = 1/[σ2(Fo2) + (0.1017P)2 + 0.3594P] where P = (Fo2 + 2Fc2)/3
5099 reflections (Δ/σ)max < 0.001
357 parameters Δρmax = 0.42 e Å3
1 restraint Δρmin = −0.34 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
S1 0.36218 (6) 0.30430 (6) 0.06353 (5) 0.0674 (3)
S1' 0.60812 (7) 0.54606 (7) 0.67909 (7) 0.0873 (3)
N1 0.64877 (16) 0.25510 (18) 0.23340 (16) 0.0511 (6)
N1' 0.89786 (17) 0.6539 (2) 0.81282 (16) 0.0570 (6)
O1 0.68462 (15) 0.41967 (13) 0.22337 (15) 0.0716 (6)
O2 0.83238 (15) 0.49138 (13) 0.29706 (14) 0.0659 (6)
H2A 0.7772 0.4877 0.2721 0.099*
O3 0.78402 (14) 0.13804 (13) 0.31666 (15) 0.0682 (6)
O4 0.93063 (13) 0.20136 (12) 0.34348 (13) 0.0594 (5)
O1' 0.94002 (16) 0.49320 (16) 0.84332 (16) 0.0792 (7)
O2' 1.09020 (16) 0.44802 (15) 0.92784 (17) 0.0805 (7)
H2' 1.0350 0.4438 0.9029 0.121*
O3' 1.02266 (15) 0.79503 (14) 0.86837 (14) 0.0699 (6)
O4' 1.16883 (13) 0.74930 (13) 0.92788 (12) 0.0583 (5)
C1 0.2546 (2) 0.2520 (2) 0.02830 (19) 0.0658 (8)
H1 0.2065 0.2853 −0.0086 0.079*
C2 0.2461 (2) 0.1575 (2) 0.0591 (2) 0.0702 (8)
H2 0.1909 0.1187 0.0447 0.084*
C3 0.32914 (19) 0.1194 (2) 0.11653 (18) 0.0571 (7)
H3 0.3346 0.0561 0.1444 0.068*
C4 0.40153 (18) 0.19769 (18) 0.12237 (17) 0.0489 (6)
C5 0.49619 (18) 0.19051 (18) 0.17316 (17) 0.0512 (6)
H5 0.5141 0.1279 0.1989 0.061*
C6 0.55842 (19) 0.26513 (19) 0.18571 (17) 0.0503 (6)
H6 0.5409 0.3285 0.1612 0.060*
C7 0.71066 (19) 0.33179 (17) 0.25083 (17) 0.0492 (6)
C8 0.80519 (18) 0.31539 (16) 0.29962 (16) 0.0442 (6)
C9 0.86181 (18) 0.40078 (18) 0.32367 (17) 0.0483 (6)
C10 0.9549 (2) 0.4027 (2) 0.3815 (2) 0.0631 (8)
H10A 1.0050 0.3813 0.3474 0.095*
H10B 0.9522 0.3574 0.4313 0.095*
H10C 0.9678 0.4707 0.4032 0.095*
C11 0.83634 (18) 0.21138 (17) 0.32113 (16) 0.0470 (6)
C12 0.9659 (2) 0.0986 (2) 0.3595 (2) 0.0732 (9)
H12A 0.9616 0.0610 0.3035 0.088*
H12B 0.9279 0.0634 0.3998 0.088*
C13 1.0655 (3) 0.1052 (3) 0.3993 (3) 0.1086 (15)
H13A 1.1034 0.1357 0.3572 0.163*
H13B 1.0894 0.0381 0.4145 0.163*
H13C 1.0694 0.1463 0.4526 0.163*
C1' 0.5056 (3) 0.5833 (4) 0.6165 (3) 0.0967 (13)
H1' 0.4553 0.5394 0.5973 0.116*
C2' 0.5052 (2) 0.6825 (4) 0.5977 (2) 0.0845 (11)
H2'1 0.4546 0.7156 0.5637 0.101*
C3' 0.5891 (2) 0.7312 (3) 0.63484 (19) 0.0637 (7)
H3' 0.6001 0.8005 0.6283 0.076*
C4' 0.6534 (2) 0.6673 (2) 0.68161 (17) 0.0557 (7)
C5' 0.7466 (2) 0.6926 (2) 0.72761 (18) 0.0576 (7)
H5' 0.7641 0.7610 0.7286 0.069*
C6' 0.8093 (2) 0.6281 (2) 0.76828 (18) 0.0576 (7)
H6' 0.7925 0.5595 0.7669 0.069*
C7' 0.9618 (2) 0.5860 (2) 0.84934 (18) 0.0556 (7)
C8' 1.05502 (19) 0.61925 (19) 0.89353 (17) 0.0501 (6)
C9' 1.1163 (2) 0.5435 (2) 0.93281 (19) 0.0594 (7)
C10' 1.2130 (2) 0.5563 (2) 0.9827 (2) 0.0771 (9)
H10D 1.2297 0.4963 1.0177 0.116*
H10E 1.2130 0.6143 1.0218 0.116*
H10F 1.2590 0.5667 0.9411 0.116*
C11' 1.07879 (19) 0.7279 (2) 0.89515 (16) 0.0505 (6)
C12' 1.1946 (2) 0.8560 (2) 0.93642 (19) 0.0609 (7)
H12C 1.1504 0.8917 0.9706 0.073*
H12D 1.1917 0.8873 0.8776 0.073*
C13' 1.2938 (2) 0.8616 (2) 0.9834 (2) 0.0691 (8)
H13D 1.2952 0.8330 1.0423 0.104*
H13E 1.3140 0.9315 0.9880 0.104*
H13F 1.3364 0.8240 0.9501 0.104*
H1A 0.661 (2) 0.208 (2) 0.2506 (19) 0.055 (9)*
H1'A 0.912 (2) 0.711 (2) 0.818 (2) 0.066 (10)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.0635 (5) 0.0618 (5) 0.0737 (5) −0.0007 (3) −0.0051 (4) 0.0088 (3)
S1' 0.0765 (6) 0.0780 (6) 0.1028 (7) −0.0186 (5) −0.0078 (5) 0.0014 (5)
N1 0.0471 (13) 0.0350 (12) 0.0689 (15) 0.0038 (10) −0.0025 (10) 0.0029 (10)
N1' 0.0489 (14) 0.0548 (15) 0.0644 (15) 0.0007 (11) −0.0052 (11) −0.0071 (11)
O1 0.0608 (13) 0.0382 (10) 0.1093 (16) 0.0041 (9) −0.0166 (11) 0.0125 (10)
O2 0.0665 (14) 0.0344 (9) 0.0914 (15) −0.0025 (8) −0.0122 (11) 0.0027 (9)
O3 0.0576 (12) 0.0332 (9) 0.1070 (16) −0.0027 (8) −0.0186 (11) 0.0007 (9)
O4 0.0492 (11) 0.0376 (9) 0.0874 (13) 0.0054 (8) −0.0084 (10) −0.0022 (8)
O1' 0.0706 (14) 0.0529 (12) 0.1078 (17) −0.0076 (10) −0.0155 (12) −0.0068 (11)
O2' 0.0668 (15) 0.0505 (12) 0.1185 (19) 0.0000 (10) −0.0117 (13) 0.0073 (11)
O3' 0.0685 (14) 0.0478 (10) 0.0869 (14) 0.0034 (9) −0.0175 (11) 0.0026 (9)
O4' 0.0521 (11) 0.0458 (10) 0.0752 (12) −0.0046 (8) −0.0004 (9) −0.0048 (8)
C1 0.0579 (18) 0.0688 (19) 0.0661 (18) 0.0031 (14) −0.0113 (14) −0.0008 (14)
C2 0.0564 (18) 0.0648 (18) 0.083 (2) −0.0062 (14) −0.0199 (14) −0.0006 (15)
C3 0.0506 (15) 0.0484 (14) 0.0669 (17) 0.0010 (12) −0.0149 (12) −0.0134 (12)
C4 0.0504 (15) 0.0441 (13) 0.0510 (14) 0.0044 (11) 0.0007 (12) −0.0056 (10)
C5 0.0494 (15) 0.0413 (13) 0.0615 (16) 0.0053 (11) 0.0007 (12) −0.0027 (11)
C6 0.0489 (15) 0.0428 (13) 0.0575 (15) 0.0068 (11) −0.0009 (12) 0.0005 (11)
C7 0.0515 (16) 0.0361 (12) 0.0592 (15) 0.0015 (11) 0.0036 (12) −0.0002 (10)
C8 0.0481 (15) 0.0336 (12) 0.0498 (13) 0.0017 (10) 0.0017 (11) −0.0035 (9)
C9 0.0529 (16) 0.0374 (13) 0.0541 (15) −0.0004 (11) 0.0042 (12) −0.0021 (10)
C10 0.0678 (19) 0.0431 (14) 0.0742 (18) −0.0095 (13) −0.0092 (15) −0.0037 (12)
C11 0.0494 (15) 0.0362 (12) 0.0526 (14) 0.0016 (11) −0.0051 (11) −0.0044 (10)
C12 0.0647 (19) 0.0408 (15) 0.107 (2) 0.0112 (13) −0.0169 (17) −0.0062 (14)
C13 0.068 (2) 0.067 (2) 0.179 (4) 0.0143 (18) −0.034 (3) −0.007 (2)
C1' 0.065 (2) 0.137 (4) 0.085 (2) −0.029 (2) −0.0066 (18) −0.025 (2)
C2' 0.058 (2) 0.125 (3) 0.067 (2) 0.008 (2) −0.0069 (16) −0.008 (2)
C3' 0.0518 (17) 0.0746 (19) 0.0628 (17) 0.0080 (14) −0.0007 (13) −0.0031 (14)
C4' 0.0528 (17) 0.0661 (17) 0.0484 (15) −0.0024 (13) 0.0063 (12) −0.0088 (12)
C5' 0.0533 (17) 0.0620 (16) 0.0573 (16) −0.0024 (13) 0.0055 (13) −0.0075 (13)
C6' 0.0547 (17) 0.0616 (16) 0.0548 (16) −0.0010 (13) −0.0008 (13) −0.0072 (12)
C7' 0.0558 (17) 0.0484 (15) 0.0612 (17) 0.0003 (12) 0.0021 (13) −0.0056 (12)
C8' 0.0464 (15) 0.0470 (13) 0.0560 (15) 0.0023 (11) 0.0020 (12) −0.0026 (11)
C9' 0.0541 (17) 0.0515 (16) 0.0710 (18) 0.0005 (12) 0.0014 (14) 0.0016 (13)
C10' 0.0569 (19) 0.0627 (18) 0.106 (3) 0.0054 (15) −0.0114 (17) 0.0150 (17)
C11' 0.0514 (16) 0.0523 (14) 0.0464 (14) −0.0004 (12) 0.0001 (12) −0.0022 (11)
C12' 0.0695 (19) 0.0465 (15) 0.0656 (17) −0.0104 (13) 0.0035 (14) −0.0012 (12)
C13' 0.0647 (19) 0.0686 (19) 0.073 (2) −0.0158 (15) 0.0051 (15) −0.0085 (15)

Geometric parameters (Å, º)

S1—C1 1.684 (3) C8—C11 1.458 (3)
S1—C4 1.710 (3) C9—C10 1.478 (3)
S1'—C1' 1.692 (4) C10—H10A 0.9600
S1'—C4' 1.712 (3) C10—H10B 0.9600
N1—C7 1.334 (3) C10—H10C 0.9600
N1—C6 1.385 (3) C12—C13 1.454 (4)
N1—H1A 0.68 (3) C12—H12A 0.9700
N1'—C7' 1.335 (4) C12—H12B 0.9700
N1'—C6' 1.381 (3) C13—H13A 0.9600
N1'—H1'A 0.77 (3) C13—H13B 0.9600
O1—C7 1.264 (3) C13—H13C 0.9600
O2—C9 1.305 (3) C1'—C2' 1.332 (6)
O2—H2A 0.8200 C1'—H1' 0.9300
O3—C11 1.207 (3) C2'—C3' 1.396 (4)
O4—C11 1.331 (3) C2'—H2'1 0.9300
O4—C12 1.447 (3) C3'—C4' 1.363 (4)
O1'—C7' 1.256 (3) C3'—H3' 0.9300
O2'—C9' 1.304 (3) C4'—C5' 1.442 (4)
O2'—H2' 0.8200 C5'—C6' 1.316 (4)
O3'—C11' 1.217 (3) C5'—H5' 0.9300
O4'—C11' 1.329 (3) C6'—H6' 0.9300
O4'—C12' 1.448 (3) C7'—C8' 1.460 (4)
C1—C2 1.334 (4) C8'—C9' 1.398 (4)
C1—H1 0.9300 C8'—C11' 1.464 (4)
C2—C3 1.452 (4) C9'—C10' 1.478 (4)
C2—H2 0.9300 C10'—H10D 0.9600
C3—C4 1.439 (4) C10'—H10E 0.9600
C3—H3 0.9300 C10'—H10F 0.9600
C4—C5 1.453 (3) C12'—C13' 1.484 (4)
C5—C6 1.310 (4) C12'—H12C 0.9700
C5—H5 0.9300 C12'—H12D 0.9700
C6—H6 0.9300 C13'—H13D 0.9600
C7—C8 1.452 (3) C13'—H13E 0.9600
C8—C9 1.396 (3) C13'—H13F 0.9600
C1—S1—C4 92.87 (14) C12—C13—H13A 109.5
C1'—S1'—C4' 91.8 (2) C12—C13—H13B 109.5
C7—N1—C6 124.3 (2) H13A—C13—H13B 109.5
C7—N1—H1A 119 (3) C12—C13—H13C 109.5
C6—N1—H1A 117 (3) H13A—C13—H13C 109.5
C7'—N1'—C6' 123.8 (3) H13B—C13—H13C 109.5
C7'—N1'—H1'A 117 (2) C2'—C1'—S1' 112.5 (3)
C6'—N1'—H1'A 120 (2) C2'—C1'—H1' 123.8
C9—O2—H2A 109.5 S1'—C1'—H1' 123.8
C11—O4—C12 116.3 (2) C1'—C2'—C3' 112.3 (3)
C9'—O2'—H2' 109.5 C1'—C2'—H2'1 123.8
C11'—O4'—C12' 117.0 (2) C3'—C2'—H2'1 123.8
C2—C1—S1 112.6 (2) C4'—C3'—C2' 113.5 (3)
C2—C1—H1 123.7 C4'—C3'—H3' 123.3
S1—C1—H1 123.7 C2'—C3'—H3' 123.3
C1—C2—C3 115.3 (3) C3'—C4'—C5' 127.6 (3)
C1—C2—H2 122.4 C3'—C4'—S1' 109.9 (2)
C3—C2—H2 122.4 C5'—C4'—S1' 122.5 (2)
C4—C3—C2 107.5 (2) C6'—C5'—C4' 126.2 (3)
C4—C3—H3 126.3 C6'—C5'—H5' 116.9
C2—C3—H3 126.3 C4'—C5'—H5' 116.9
C3—C4—C5 125.4 (2) C5'—C6'—N1' 125.3 (3)
C3—C4—S1 111.76 (19) C5'—C6'—H6' 117.3
C5—C4—S1 122.84 (19) N1'—C6'—H6' 117.3
C6—C5—C4 125.3 (2) O1'—C7'—N1' 118.2 (3)
C6—C5—H5 117.3 O1'—C7'—C8' 121.3 (2)
C4—C5—H5 117.3 N1'—C7'—C8' 120.5 (2)
C5—C6—N1 123.8 (2) C9'—C8'—C7' 116.8 (2)
C5—C6—H6 118.1 C9'—C8'—C11' 124.0 (2)
N1—C6—H6 118.1 C7'—C8'—C11' 119.2 (2)
O1—C7—N1 117.9 (2) O2'—C9'—C8' 120.3 (3)
O1—C7—C8 120.7 (2) O2'—C9'—C10' 111.9 (2)
N1—C7—C8 121.3 (2) C8'—C9'—C10' 127.8 (3)
C9—C8—C7 117.9 (2) C9'—C10'—H10D 109.5
C9—C8—C11 123.3 (2) C9'—C10'—H10E 109.5
C7—C8—C11 118.8 (2) H10D—C10'—H10E 109.5
O2—C9—C8 120.2 (2) C9'—C10'—H10F 109.5
O2—C9—C10 112.8 (2) H10D—C10'—H10F 109.5
C8—C9—C10 126.9 (2) H10E—C10'—H10F 109.5
C9—C10—H10A 109.5 O3'—C11'—O4' 121.1 (2)
C9—C10—H10B 109.5 O3'—C11'—C8' 124.2 (2)
H10A—C10—H10B 109.5 O4'—C11'—C8' 114.6 (2)
C9—C10—H10C 109.5 O4'—C12'—C13' 107.5 (2)
H10A—C10—H10C 109.5 O4'—C12'—H12C 110.2
H10B—C10—H10C 109.5 C13'—C12'—H12C 110.2
O3—C11—O4 120.9 (2) O4'—C12'—H12D 110.2
O3—C11—C8 124.8 (2) C13'—C12'—H12D 110.2
O4—C11—C8 114.2 (2) H12C—C12'—H12D 108.5
O4—C12—C13 107.8 (2) C12'—C13'—H13D 109.5
O4—C12—H12A 110.2 C12'—C13'—H13E 109.5
C13—C12—H12A 110.2 H13D—C13'—H13E 109.5
O4—C12—H12B 110.2 C12'—C13'—H13F 109.5
C13—C12—H12B 110.2 H13D—C13'—H13F 109.5
H12A—C12—H12B 108.5 H13E—C13'—H13F 109.5
C4—S1—C1—C2 0.3 (3) C4'—S1'—C1'—C2' 0.3 (3)
S1—C1—C2—C3 0.6 (4) S1'—C1'—C2'—C3' −0.4 (4)
C1—C2—C3—C4 −1.4 (4) C1'—C2'—C3'—C4' 0.4 (4)
C2—C3—C4—C5 −179.8 (3) C2'—C3'—C4'—C5' 179.7 (3)
C2—C3—C4—S1 1.6 (3) C2'—C3'—C4'—S1' −0.2 (3)
C1—S1—C4—C3 −1.2 (2) C1'—S1'—C4'—C3' −0.1 (2)
C1—S1—C4—C5 −179.8 (2) C1'—S1'—C4'—C5' −179.9 (2)
C3—C4—C5—C6 −172.9 (3) C3'—C4'—C5'—C6' −176.2 (3)
S1—C4—C5—C6 5.6 (4) S1'—C4'—C5'—C6' 3.7 (4)
C4—C5—C6—N1 −178.9 (2) C4'—C5'—C6'—N1' −179.3 (3)
C7—N1—C6—C5 −176.1 (3) C7'—N1'—C6'—C5' −176.3 (3)
C6—N1—C7—O1 1.2 (4) C6'—N1'—C7'—O1' −0.4 (4)
C6—N1—C7—C8 −178.6 (2) C6'—N1'—C7'—C8' 178.5 (3)
O1—C7—C8—C9 6.9 (4) O1'—C7'—C8'—C9' −3.4 (4)
N1—C7—C8—C9 −173.2 (2) N1'—C7'—C8'—C9' 177.8 (3)
O1—C7—C8—C11 −173.1 (2) O1'—C7'—C8'—C11' 177.1 (3)
N1—C7—C8—C11 6.7 (4) N1'—C7'—C8'—C11' −1.7 (4)
C7—C8—C9—O2 −4.7 (4) C7'—C8'—C9'—O2' 1.1 (4)
C11—C8—C9—O2 175.3 (2) C11'—C8'—C9'—O2' −179.4 (3)
C7—C8—C9—C10 172.8 (3) C7'—C8'—C9'—C10' −178.8 (3)
C11—C8—C9—C10 −7.2 (4) C11'—C8'—C9'—C10' 0.7 (5)
C12—O4—C11—O3 1.5 (4) C12'—O4'—C11'—O3' 4.6 (4)
C12—O4—C11—C8 −175.9 (2) C12'—O4'—C11'—C8' −176.1 (2)
C9—C8—C11—O3 165.5 (3) C9'—C8'—C11'—O3' −173.0 (3)
C7—C8—C11—O3 −14.5 (4) C7'—C8'—C11'—O3' 6.4 (4)
C9—C8—C11—O4 −17.2 (4) C9'—C8'—C11'—O4' 7.7 (4)
C7—C8—C11—O4 162.8 (2) C7'—C8'—C11'—O4' −172.8 (2)
C11—O4—C12—C13 −169.1 (3) C11'—O4'—C12'—C13' 173.7 (2)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N1′—H1′A···O3′ 0.77 (3) 1.98 (3) 2.615 (3) 139 (3)
N1—H1A···O3 0.68 (3) 2.10 (3) 2.637 (3) 137 (3)
O2′—H2′···O1′ 0.82 1.65 2.399 (3) 152
O2—H2A···O1 0.82 1.67 2.419 (3) 151
O2—H2A···O3i 0.82 2.48 2.936 (3) 117

Symmetry code: (i) −x+3/2, y+1/2, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: ZS2216).

References

  1. Bruker (2003). SMART, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Buisson, J. P., Bisagni, E., Monneret, C., Demerseman, P., Leon, C. & Platzer, N. (1996). J. Heterocycl. Chem. 33, 973–977.
  3. Jessen, H. J. & Gademann, K. (2010). Nat. Prod. Rep. 27, 1168–1185. [DOI] [PubMed]
  4. Rigby, J. H. & Burkhardt, F. J. (1986). J. Org. Chem. 51, 1374–1376.
  5. Rigby, J. H. & Qabar, M. (1989). J. Org. Chem. 54, 5852–5853.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Zhao, S.-Y. & Huang, J. (2012). Acta Cryst. E68, o798. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812028176/zs2216sup1.cif

e-68-o2284-sup1.cif (24.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812028176/zs2216Isup2.hkl

e-68-o2284-Isup2.hkl (249.7KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812028176/zs2216Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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